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At least 37 records · Page 2

Recent Experience with the CMS Data Management System

The CMS[1] experiment manages a large-scale data infrastructure, currently handling over 200 PB of disk and 500 PB of tape storage and transferring more than 1 PB of data per day on average between various WLCG[2] sites. Utilizing Rucio[3] for high-level data management, FTS[4] for data transfers, and a variety of storage and network technologies at the sites, CMS confronts inevitable challenges due to the system’s growing scale and evolving nature. Key challenges include managing transfer and storage failures, optimizing data distribution across different storages based on production and analysis needs, implementing necessary technology upgrades and migrations, and efficiently handling user requests. The data management team has established comprehensive monitoring to supervise this system and has successfully addressed many of these challenges. The team’s efforts aim to ensure data availability and protection, minimize failures and manual interventions, maximize transfer throughput and resource utilization, and provide reliable user support. This paper details the operational experience of CMS with its data management system in recent years, focusing on the encountered challenges, the effective strategies employed to overcome them and the ongoing challenges as we prepare for future demands.

Öztürk, Hasan [CERN]↗

SIRIUS: Science-Driven Data Management for Multi-Tiered Storage

The data sets being generated by large applications on very large-scale systems are increasing in both size and complexity. At the same time, there are new ways available to store and access these data sets. The goal in this project is to develop software that applications can use to make use of new and existing storage technologies in more sophisticated ways. One challenge in scientific data management is handling ‘hot’ vs ‘cold’ data. Data that is hot is data that is needed (or will be needed soon) in order for the program to continue progressing, while cold data is either output (and so will not be need further during the life of the program) or will not be needed until significantly later in the program’s run. Hot data should be stored in a way that allows fast access. On most systems, economic factors lead to an inverse relationship between storage performance and storage capacity and so fast access storage is limited. This makes it important to correctly place hot and cold data and avoid cold data unnecessarily consuming precious resources. In this reporting period, we addressed this challenge in various ways and at various levels. Data management frameworks offer only limited control to applications in how data is stored. We have added software capabilities for seamlessly moving data between layers of the storage technology using promote and demote functions to existing software frameworks. This gives direct control to applications in deciding what priority data receives. Additionally, we integrated different storage layer management frameworks in order to allow data to be exchanged and moved between storage layers in a consistent way across the application. Further, applications are not always able to directly decide what storage level makes sense for a given piece of data without an understanding of the underlying storage technologies. Data storage frameworks are often positioned to make these sorts of decisions in service of the application. We have added machine-learning based capabilities to data staging frameworks in order to make intelligent decisions about where data should be stored given learning about patterns in previous usage of similar data.

97 MATHEMATICS AND COMPUTING↗

Value of Information and Data Management Platform Promoting Modern Data Analysis Utilization. STTR Phase I, Final Technical Report

The immense growth in weather and river sensor data availability along with increases in computational power and algorithmic sophistication have enabled the widespread application of physical, machine learning, and artificial intelligence algorithms to river forecasting. The forecasts produced by widely varying model approaches are inherently limited in different ways, such as by the number and quality of training observations, producing biased predictions that achieve optimal skill only over specific ranges of weather and river conditions. Thus, despite the growing availability and new sources of forecasts, hydropower owners cannot fully leverage the information because they lack an effective mechanism to determine the “best” forecast for given conditions or objectives. Tools are needed to consolidate forecast information, demonstrate skill, and extract optimal forecast guidance from the range of possibilities. Such tools will increase uptake and beneficial use of the growing wealth of forecast information, and lead to improved operating decisions, optimal power generation, and enhanced system value. This research proposes to improve the value of forecasts by developing a broadly accessible verification framework and applying machine learning techniques to identify the ‘best’ forecast from an ensemble of sources given the current weather, river, and operating conditions.

13 HYDRO ENERGY↗

Transitioning CMS to Rucio Data Managment

Following a thorough review in 2018, the CMS experiment at the CERN LHC decided to adopt Rucio as its new data management system. Rucio is emerging as a community software project and will replace an aging CMSonly system before the start-up of LHC Run 3 in 2021. Rucio was chosen after an evaluation determined that Rucio could meet the technical and scale needs of CMS. The data management system for CMS needs to manage the current data sample of approximately 200 PB of data with 1 PB of transfers per day. The data management system must also have a development path suitable for LHC Run 4 (2026) data rates, which are expected to be 50 times larger.This contribution details the ongoing CMS adoption process as we replace our legacy system with Rucio, focusing on the challenges of integrating Rucio into an established set of experimental tools and procedures. This will include the migration of metadata, the construction of interfaces to the rest of the CMS computing tools, scale tests, operations, monitoring, and the plan to gradually turn over primary responsibility for the management of data to Rucio. A description of CMS user data management with Rucio will also be provided.

Vaandering, Eric↗

Extending the Publish/Subscribe Abstraction for High-Performance I/O and Data Management at Extreme Scale

The Adaptable I/O System (ADIOS) represents the culmination of substantial investment in Scientific Data Management, and it has demonstrated success for several important extreme-scale science cases. However, looking towards the exascale and beyond, we see the development of yet more stringent data management requirements that require new abstractions. Therefore, there is an opportunity to attempt to connect the traditional realms of HPC I/O optimization with the Database / Data Management community. As such, in this paper we offer some specific examples from our ongoing work in managing data structures, services, and performance at the extreme scale for scientific computing. Using the publish/subscribe model afforded by ADIOS, we demonstrate a set of services that connect data format, metadata, queries, data reduction, and high-performance delivery. The resulting publish/subscribe framework facilitates connection to on-line workflow systems to enable the dynamic capabilities that will be required for exascale science.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

An Autonomous MCP Bridge to Rucio: Enhancing Data Management Accessibility for High Energy Physics

The Rucio Data Management System [1] is an important tool used by High Energy Physics experiments, including those at Fermi National Accelerator Laboratory, to store and manage exabyte-scale scientific datasets. Despite its central role in coordinating data across globally distributed storage sites, Rucio's command line interface (CLI) presents a steep learning curve, and makes it difficult for scientists to navigate through. To solve this issue, a containerized Model Context Protocol (MCP) [2] server was built that connects Large Language Models directly to Rucio, allowing AI agents to handle data tasks by using simple, natural language rather than memorized terminal commands. The core engineering focus of this project was moving the server away from slow terminal commands that require text parsing and replacing them with a native Python Client API toolset and a planned REST API framework. Moving to the Python API handles data operations directly in memory, which helps clear up formatting errors, provides the AI with clean, structured JSON data and speeds up tool execution. To prove that the system actually works, a benchmarking pipeline was also built with various questions to test the AI across four different model configurations. The questions included finding data scopes, tracking down specific datasets, and checking replication rules. Through benchmarking, early runs showed that with raw terminal text, the model would get confused and stuck, whereas switching to the Python API to feed the AI clean, structured data yielded massive improvement. By creating an intelligent and autonomous bridge to a storage network, this project shows how AI can be implemented in scientific data management, which ultimately helps scientists at Fermilab spend less time sorting through data and more time focusing on their experiments and analysis.

Akella, Kashyap [William Rainey Harper Coll.]↗

A Case Study of Multimodal, Multi-institutional Data Management for the Combinatorial Materials Science Community

Although the convergence of high-performance computing, automation, and machine learning has significantly altered the materials design timeline, transformative advances in functional materials and acceleration of their design will require addressing the deficiencies that currently exist in materials informatics, particularly a lack of standardized experimental data management. The challenges associated with experimental data management are especially true for combinatorial materials science, where advancements in automation of experimental workflows have produced datasets that are often too large and too complex for human reasoning. The data management challenge is further compounded by the multimodal and multi-institutional nature of these datasets, as they tend to be distributed across multiple institutions and can vary substantially in format, size, and content. Furthermore, modern materials engineering requires the tuning of not only composition but also of phase and microstructure to elucidate processing–structure–property–performance relationships. To adequately map a materials design space from such datasets, an ideal materials data infrastructure would contain data and metadata describing (i) synthesis and processing conditions, (ii) characterization results, and (iii) property and performance measurements. In this work, we present a case study for the low-barrier development of such a dashboard that enables standardized organization, analysis, and visualization of a large data lake consisting of combinatorial datasets of synthesis and processing conditions, X-ray diffraction patterns, and materials property measurements generated at several different institutions. While this dashboard was developed specifically for data-driven thermoelectric materials discovery, we envision the adaptation of this prototype to other materials applications, and, more ambitiously, future integration into an all-encompassing materials data management infrastructure.

36 MATERIALS SCIENCE↗

Microbiome data management in action workshop: Atlanta, GA, USA, June 12–13, 2024

Microbiome research is revolutionizing human and environmental health, but the value and reuse of microbiome data are significantly hampered by the limited development and adoption of data standards. While several ongoing efforts are aimed at improving microbiome data management, significant gaps still remain in terms of defining and promoting adoption of consensus standards for these datasets. The Strengthening the Organization and Reporting of Microbiome Studies (STORMS) guidelines for human microbiome research have been endorsed and successfully utilized by many research organizations, publishers, and funding agencies, and have been recognized as a consensus community standard. No equivalent effort has occurred for environmental, synthetic, and non-human host-associated microbiomes. To address this growing need within the microbiome research community, we convened the Microbiome Data Management in Action Workshop (June 12–13, 2024, in Atlanta, GA, USA), to bring together key decision makers in microbiome science including researchers, publishers, funders, and data repositories. The 50 attendees, representing the diverse and interdisciplinary nature of microbiome research, discussed recent progress and challenges, and brainstormed actionable recommendations and paths forward for coordinated environmental microbiome data management and the modifications necessary for the STORMS guidelines to be applied to environmental, non-human host, and synthetic microbiomes. The outcomes of this workshop will form the basis of a formalized data management roadmap to be implemented across the field. These best practices will drive scientific innovation now and in years to come as these data continue to be used not only in targeted reanalyses but in large-scale models and machine learning efforts.

54 ENVIRONMENTAL SCIENCES↗

Advanced Data Management for the Wastewater Industry

This information sheet discusses the technology pillar Advanced Data Management as a pathway toward improving wastewater infrastructure sustainability and resiliency. To supplement existing literature on current technologies and policies for improving resiliency at wastewater treatment plants (WWTPs), this document aims to accomplish the following: • Summarize key technologies such as Supervisory Control and Data Acquisition (SCADA), digital twins, and smart sensors • Summarize relevant cybersecurity measures and data management tools available for WW utilities • Summarize advances in sensing and monitoring technologies • Serve as a comprehensive (though not exhaustive) repository for data management for wastewater utilities The Advanced Management Technical Information Sheet should be viewed as a general guide to established best practices for the water and wastewater sector when considering implementing energy capture and energy- or process-efficient technologies. Further details are presented in the SWIFt Technology Information Sheet Series for accompanying Technology Pillars.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Performance Potential of Mixed Data Management Modes for Heterogeneous Memory Systems

Many high-performance systems now include different types of memory devices within the same compute platform to meet strict performance and cost constraints. Such heterogeneous memory systems often include an upper-level tier with better performance, but limited capacity, and lower-level tiers with higher capacity, but less bandwidth and longer latencies for reads and writes. To utilize the different memory layers efficiently, current systems rely on hardware-directed, memory -side caching or they provide facilities in the operating system (OS) that allow applications to make their own data-tier assignments. Since these data management options each come with their own set of trade-offs, many systems also include mixed data management configurations that allow applications to employ hardware- and software-directed management simultaneously, but for different portions of their address space. Despite the opportunity to address limitations of stand-alone data management options, such mixed management modes are under-utilized in practice, and have not been evaluated in prior studies of complex memory hardware. In this work, we develop custom program profiling, configurations, and policies to study the potential of mixed data management modes to outperform hardware- or software-based management schemes alone. Our experiments, conducted on an Intel ® Knights Landing platform with high-bandwidth memory, demonstrate that the mixed data management mode achieves the same or better performance than the best stand-alone option for five memory intensive benchmark applications (run separately and in isolation), resulting in an average speedup compared to the best stand-alone policy of over 10 %, on average.

Effler, Chad↗

"PoliMOR: A Policy Engine \"Made-to-Order\" for Automated and Scalable Data Management in Lustre"

Modern supercomputing systems are increasingly reliant on hierarchical, multi-tiered file and storage system architectures due to cost-performance-capacity trade-offs. Within such multi-tiered systems, data management services are required to maintain healthy utilization, performance, and capacity levels. We present PoliMOR, a pragmatic and reliable policy-driven data management framework. PoliMOR is composed of modular, single-purpose agents that gather file system metadata and enforce policies on storage systems. PoliMOR facilitates automated and scalable data management with customizable agents tailored to HPC facility-specific storage systems and policies. Our evaluations demonstrate the scalability and performance of PoliMOR both by its individual agents and as a collective entity. We believe PoliMOR is widely applicable across HPC facilities with large-scale data management challenges and will garner interest from the HPC community, given its flexible and open-source nature.

George, Anjus↗

LDM-148: Rubin Observatory Data Management System Design

The Rubin Observatory LSST Data Management System (DMS) is a set of services employing a variety of software components running on computational and networking infrastructure that combine to deliver science data products to the observatory's users and support observatory operations. This document describes the components, their service instances, and their deployment environments as well as the interfaces among them, the rest of the LSST system, and the outside world.

79 ASTRONOMY AND ASTROPHYSICS↗

TCR Data Management Plan

The Oak Ridge National Laboratory (ORNL) Transformation Challenge Reactor (TCR) program is developing additive manufacturing and artificial intelligence (AI) to deliver enabling technologies for advanced reactors. Through the application of these advanced technologies, the program targets delivering solutions to the high costs and lengthy deployment timelines that threaten the future of nuclear energy—the country’s largest source of carbon-free energy. This document describes the plan for integrating and managing TCR data from multiple sources throughout ORNL and external sources, including novel data sources associated with advanced manufacturing, characterization systems, and the TCR Digital Platform that incorporates various levels of AI and data analytics.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Data Management in the Continuum: Cross-facility Object-based Data Transfers

Scientific workflows are evolving from relying on a monolithic storage subsystem at a single High-Performance Computing (HPC) facility to using geographically distributed file systems, repositories, and cloud storage. As a result, storing, accessing, transferring, and managing scientific data have become highly complex and prone to performance inefficiencies. This paper delves into these challenges by exploring an optimized end-to-end interface designed to seamlessly connect various local and remote storage systems, enabling efficient data movement of objects across HPC–Cloud and HPC–HPC environments. We showcase this capability through an object-focused data management runtime system, discuss the effects of relaxed consistency semantics in distributed object scenarios, and illustrate its application in an earthquake simulation workflow. Besides reducing the amount of data by selectively transferring regions of interest, our facility-local results achieved a speedup of 45 × over an optimized HDF5 usage and 15 × over the HDF5 with caching by using the new interface in PDC-XF.

Bez, Jean Luca↗

Scientific Data Management Beyond Traditional Computing Boundaries

Scientific data management is undergoing a fundamental transformation driven by the convergence of artificial intelligence (AI)/machine learning workflows, distributed computing and storage environments, and exponential data growth. Here, we analyze how these developments address current limitations while enabling new capabilities for cross-facility collaboration and AI-driven research.

Widener, Patrick [Oak Ridge National Laboratory (O↗

LDM-151: Data Management Science Pipelines Design

The LSST Science Requirements Document (the LSST SRD) specifies a set of data product guidelines, designed to support science goals envisioned to be enabled by the LSST observing program. Following these guidelines, the details of these data products have been described in the LSST Data Products Definition Document (DPDD), and captured in a formal flow-down from the SRD via the LSST System Requirements (LSR), Observatory System Specifications (OSS), to the Data Management System Requirements (DMSR). The LSST Data Management subsystem's responsibilities include the design, implementation, deployment and execution of software pipelines necessary to generate these data products. This document describes the design of the scientific aspects of those pipelines.

79 ASTRONOMY AND ASTROPHYSICS↗

LANL Nuclear Data Manager Format Specification v1.0

The LANL nuclear data manager tool is a Python utility that downloads nuclear data from the Nuclear Data Team’s website at https://nucleardata.lanl.gov, arranges it, and configures directory listings for nuclear codes such as the MCNP code to consume. In this document, the Version 1.0 API that this tool relies on will be discussed, which will show how an external provider of nuclear data could set up their website to provide a compatible implementation.

97 MATHEMATICS AND COMPUTING↗

RC-SFA Data Management Templates and Guidance for Standardized, Reusable AI-Ready Data Packages

This data package provides templates and supporting documentation developed by the River Corridor Science Focus Area (RC-SFA; https://www.pnnl.gov/projects/river-corridor) to communicate its approach to managing and publishing AI-ready data. The package is intended to help data users and data producers understand the structures, metadata practices, and quality-control approaches that support consistent, reusable, and machine-actionable data products across RC-SFA studies. Rather than focusing on a single experimental dataset, this package documents the data management framework used to make RC-SFA data easier to find, ingest, navigate, and interpret. The materials in this package reflect RC-SFA practices for standardized data package organization, including the use of a human- and machine-readable README, file-level metadata, data dictionaries, descriptive file naming, method identifiers, and automated and review-based quality assurance procedures. Together, these components illustrate how RC-SFA extends FAIR data principles toward AI-readiness by prioritizing deep metadata, consistency across data packages, and support for informed downstream reuse by both humans and computational tools. This dataset is comprised of (1) readme; (2) presentation slides with an overview of RC-SFA approach and guidance; (3) document of RC-SFA best practices; (4) data dictionary (dd); (5) file level metadata (flmd); and a subfolder containing templates for dd and flmd. All files are .csv and .pdf. For details on how to navigate data packages generated by this project, see https://data.ess-dive.lbl.gov/portals/PNNLRiverCorridorSFA/About.

AI-readiness↗