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At least 37 records · Page 2

Data Sharing in Radiation Biology: Towards FAIR

The value of scientific data depends on their findability, accessibility, integrability and reusability according to the FAIR principles. Together with the sustainability of data preservation and access, these principles underpin the long term benefits of scientific research. Within the domain of radiobiology we have a huge array of data types, themes and complexities which make standardisation of metadata, data structure and data integration very challenging. Moreover, it is clear that, for example, in the area of disaster preparedness, the ready discovery and availability of multiple types of data, for example on biological effects of exposure, climatology, ecology, human behavioural and attitudinal studies, is important for an integrated scientific approach. Because these data are spread over many databases, journal supplementary information resources and even the computers of the investigators, their discovery and reuse can be challenging. Despite exhortations from funding agencies and scientific institutions over the past two decades there is still a serious deficit in the willingness and in some cases the ability of investigators to share data, and although much may not be formally "Public domain“, information about the existence of the data, their metadata, and how to obtain them should always be available. We report the progress of work on three databases, the STORE and the NASA GeneLab and LSDA repositories to leverage the Radiation Biology Ontology (RBO), a structured terminology for metadata that can be used by all radiation biology-relevant databases to unite federated and automated data searches across multiple databases, for example using web services, and through semantic web technologies supporting data discovery. The initial primary use-cases for RBO were archiving data in the STORE database (https://www.storedb.org/), the repository used for the RadoNorm and Pianoforte Projects among others, and in the NASA Open Science Data Repository (https://osdr.nasa.gov/bio). The scope of radiobiology research ranges from basic physics to radiation oncology to sociolegal studies; no existing ontology had the necessary breadth or depth to fulfill this need. In addition, a formal ontology has the advantage of being usable for machine learning and, importantly, for tasks like data integration, knowledge extraction from the scientific literature and for query extension and data classification. Standardisation of metadata is one of the primary objectives of the FAIR principles for open data; RBO is an important landmark for FAIR-compliant radiation biology data sharing. The RBO is developed using the open-source tools of GitHub and the OBO Foundry-led Ontology Development Kit, and published through GitHub and the NIH/NCBI BioPortal website. This initial phase of concept modeling has yielded an ontology that has more than 300 declared concepts, with more than 3500 additional concepts imported from other OBO Foundry ontologies with relevance to radiation biology (for example, concepts from the ISO standard Basic Formal Ontology, the Environment Ontology and the Gene Ontology). We welcome input into the development of RBO and encourage its adoption.

ontologies↗

The Mark 5C VLBI Data System

The Mark 5C disk-based VLBI data system is being developed as the third-generation Mark 5 disk-based system, increasing the sustained data-recording rate capability to 4 Gbps. It is built on the same basic platform as the Mark 5A, Mark 5B and Mark 5B+ systems and will use the same 8-disk modules as earlier Mark 5 systems, although two 8-disk modules will be necessary to support the 4 Gbps rate. Unlike its earlier brethren, which use proprietary data interfaces, the Mark 5C will accept data from a standard 10 Gigabit Ethernet connection and be compatible with the emerging VLBI Data Interchange Format (VDIF) standard. Data sources for the Mark 5C system will be based on new digital backends now being developed, specifically the RDBE in the U.S. and the dBBC in Europe, as well as others. The Mark 5C system is being planned for use with the VLBI2010 system and will also be used by NRAO as part of the VLBA sensitivity upgrade program; it will also be available to the global VLBI community from Conduant. Mark 5C system specification and development is supported by Haystack Observatory, NRAO, and Conduant Corporation. Prototype Mark 5C systems are expected in early 2010.

Whitney, Alan↗

Experiences in Bridging the Gap between Science and Decision Making at NASA's GSFC Earth Science Data and Information Services Center (GES DISC)

Recognizing the significance of NASA remote sensing Earth science data in monitoring and better understanding our planet s natural environment, NASA has implemented the Decision Support Through Earth Science Research Results program (NASA ROSES solicitations). a) This successful program has yielded several monitoring, surveillance, and decision support systems through collaborations with benefiting organizations. b) The Goddard Space Flight Center (GSFC) Earth Sciences Data and Information Services Center (GES DISC) has participated in this program on two projects (one complete, one ongoing), and has had opportune ad hoc collaborations gaining much experience in the formulation, management, development, and implementation of decision support systems utilizing NASA Earth science data. c) In addition, GES DISC s understanding of Earth science missions and resulting data and information, including data structures, data usability and interpretation, data interoperability, and information management systems, enables the GES DISC to identify challenges that come with bringing science data to decision makers. d) The purpose of this presentation is to share GES DISC decision support system project experiences in regards to system sustainability, required data quality (versus timeliness), data provider understanding of how decisions are made, and the data receivers willingness to use new types of information to make decisions, as well as other topics. In addition, defining metrics that really evaluate success will be exemplified.

Kempler, Steven↗

Transformation of the NASA Life Sciences Portal to a FAIR Data Point

The FAIR principles emphasize optimizing metadata, the vast majority of which are textual in nature, and often organized into attribute name-value pairs. This uniformity has led to the development of guidelines and best practices for providing programmatic access to scientific data through their metadata, yielding the first iteration of the FAIR Data Point Specifications (FDPS). A key feature of the FDPS is its support for automated agents seeking and fetching data without first needing to learn a plethora of different application programming interfaces. These software agents can interrogate metadata catalogs that adhere to FDPS in a uniform manner because each catalog describes itself and its metadata schema consistently. This approach enhances the sustainability of data retrieval support, allowing systems to refine and update their metadata schemas as needed and without requiring data-seeking software agents to change how they interrogate FDPS catalogs. An essential aspect of the FDPS is the standardization of data catalog semantics, which formalizes concepts such as “metadata” and “metadata service” and links them to other concepts specifications including the Data Catalog Vocabulary (DCAT), a W3C standard that is also the basis of NASA-STD-2831 “Metadata Standard for Data Discoverability,” authored by NASA’s Office of the Chief Information Officer. The FDPS references DCAT (version 2) elements which focus on the distribution of datasets and support the goal of stream-lined catalog integration across repositories for improved data discovery. Additionally, the FDPS also prescribe the use of Linked Data Platform elements for data catalog-metadata record containment descriptions, allowing users to ascertain which data and metadata belong to which catalogs. NASA’s Life Sciences Portal is implementing the FDPS while formalizing its metadata schema to support the accelerated synthesis of knowledge from space life sciences investigations.

platform↗

The effect of heat treatment and test parameters on the aqueous stress corrosion cracking of D6AC steel

The crack growth behavior of D6AC steel as a function of stress intensity, stress and corrosion history and test technique, under sustained load in natural seawater, 3.3 percent NaCl solution, distilled water, and high humidity air was investigated. Reported investigations of D6AC were considered with emphasis on thermal treatment, specimen configuration, fracture toughness, crack-growth rates, initiation period, threshold, and the extension of corrosion fatigue data to sustained load conditions. Stress history effects were found to be most important in that they controlled incubation period, initial crack growth rates, and apparent threshold.

Gilbreath, W. P.↗

A Rapidly Declining Arctic Perennial Sea Ice Cover

The perennial sea ice cover in the Arctic is shown to be declining at -8.9 plus or minus 2.0% per decade, using 22 years of satellite data. A sustained decline at this rate would mean the disappearance of the multiyear ice cover during this century and drastic changes in the seasonal characteristics of the Arctic ice cover. An apparent increase in the fraction of second year ice in the 1990s is also inferred suggesting an overall thinning of the ice cover while co-registered satellite surface temperatures show a warming trend of 0.8 plus or minus 0.6 K per decade in summer and a good correlation with the perennial ice data.

Comiso, Josefino C.↗

Space Qualified High Speed Reed Solomon Encoder

This paper reports a Class S CCSDS recommendation Reed Solomon encoder circuit baselined for several NASA programs. The chip is fabricated using United Technologies Microelectronics Center's UTE-R radiation-hardened gate array family, contains 64,000 p-n transistor pairs, and operates at a sustained output data rate of 200 MBits/s. The chip features a pin selectable message interleave depth of from 1 to 8 and supports output block lengths of 33 to 255 bytes. The UTE-R process is reported to produce parts that are radiation hardened to 16 Rads (Si) total dose and 1.0(exp -10) errors/bit-day.

Gambles, Jody W.↗

NASA’s Digital Information Platform to Accelerate the Transformation of the National Airspace System

In order to accelerate the digital transformation of airspace operations, a foundational framework and infrastructure for providing sustainable, data-driven, and cohesive decision-making digital services for both traditional and emergent air vehicles is being developed. The reference implementation of Digital Information Platform builds an ecosystem for the aviation community by providing access to a secure and trusted source of aviation data and services. Several key features and services have been implemented to enable secure data sharing, communication, and service registration on the Platform. The technical approach used to implement these features is presented here. NASA-developed integrated aviation data and machine learning based prediction services to optimize airspace operations are available on the Platform. These services are being evaluated in an operational environment by flight operators and the real-world benefits are being captured. The Platform fosters collaboration among industry and researchers to develop complex aviation services and the aim is to make it publicly accessible for consumption by the aviation community.

Digital Transformation↗

NASA’s Digital Information Platform to Accelerate the Transformation of the National Airspace System

In order to accelerate the digital transformation of airspace operations, a foundational framework and infrastructure for providing sustainable, data-driven, and cohesive decision-making digital services for both traditional and emergent air vehicles is being developed. The reference implementation of Digital Information Platform builds an ecosystem for the aviation community by providing access to a secure and trusted source of aviation data and services. Several key features and services have been implemented to enable secure data sharing, communication, and service registration on the Platform. The technical approach used to implement these features is presented here. NASA-developed integrated aviation data and machine learning based prediction services to optimize airspace operations are available on the Platform. These services are being evaluated in an operational environment by flight operators and the real-world benefits are being captured. The Platform fosters collaboration among industry and researchers to develop complex aviation services and the aim is to make it publicly accessible for consumption by the aviation community.

Digital Transformation↗

NASA Power: Global Solar Insolation, Meteorological Parameter Data, and Web Services to Support Sustainable Building Design and Operations

The buildings industry is currently striving to adopt green solutions to make infrastructure more energy-efficient in order to meet the 2050 net-zero climate goals. This planning requires reliable environmental datasets that are crucial in designing, building, and maintaining our world’s-built environment, as well as other energy-related processes and investments. This webinar for the National Institute of Building Sciences provides an overview of NASA’s Prediction Of Worldwide Energy Resources (POWER) Project that informs decision-making and development for sustainable building design and operations by enabling public open discovery, efficient access, and convenient distribution of NASA’s Earth Observations and global atmospheric model datasets. POWER’s datastore is comprised of solar radiation and surface meteorology parameters, spanning nearly 40 years of hourly data, that are easily accessible via several access methods and tools to support three focus areas: 1) renewable energy deployment and management, 2) sustainable infrastructure, and 3) agroclimatology applications. POWER and NASA Earth Science both plan future data parameters, updated tools, and improved observations that could directly support U.S. and international sustainable development goals, climate strategies, and building information modeling. To this end, solar data from several NASA projects and meteorological data from NASA assimilation models have already been reformatted and disseminated to the public via a user-friendly web GIS-enabled based data portal through the POWER Project. POWER data is analysis-ready and accessible through an Application Programming Interface (API), ArcGIS Image Services, and the project’s Data Access Viewer enhanced (DAVe), an interactive online tool. The POWER DAVe also features data consistent with ASHRAE Climate Design Conditions and has developed web image services showing Building Climate Zones and their variability. Through those tools, the data can be downloaded into multiple formats that support the infrastructure community, including CSV and Energy Plus Weather (EPW). POWER’s entire data product catalog is available through Amazon Web Services (AWS) Open Data Registry (ODR) via a free and publicly accessible Simple Storage Service (S3). This webinar provides a full overview of the NASA POWER Project's data and services developed in collaboration with the sustainable infrastructure community. Examples of how the renewable energy and building communities have utilized POWER data products to make decisions and a preview of future data product expansion, including climate projections, and web services will also be provided. Additionally, use case stories from our broad community of users will be presented.

Paul W. Stackhouse↗

NASA POWER: Providing Present and Future Climate Services Based on NASA Data for the Energy, Agricultural, and Sustainable Buildings Communities

NASA’s Prediction of Worldwide Energy Resource (POWER) project facilitates the use of NASA Earth Science data holdings within the renewable energy, agricultural, and building heating/cooling design industries. POWER packages solar and meteorological data at various temporal levels from several NASA projects in a user friendly GIS-enabled web services system (https://power.larc.nasa.gov). Data users can access these data either through an intuitive data viewer, image services fully integrable with GIS analysis, connections in the cloud through an Amazon Web Services S3 Bucket, or fully customizable access through an API. Data provided by POWER has been successfully used by decision makers to support actions that address climate change. For example, POWER data has been used to remotely monitor solar array fields and integrated in a sizing tool for off-grid solar and storage systems. POWER data has also been coupled with key building decision tools to support design and retrofitting of building energy systems for energy efficiency and reduction of greenhouse gases. POWER is now developing climate services to provide time series of the projected future evolution of key quantities that interest our users, such as heating/cooling degree days, temperature, wind speed, and downwelling solar flux. We demonstrate the potential of the new climate services by presenting here a range of possible future changes in these quantities at different NASA centers across the continental United States. These data services are based on downscaled climate model data from the NASA Earth Exchange Global Daily Downscaled Projections (NEX-GDDP) data set. We highlight the important insights that new climate services can provide. Our climate services will help our user communities quantify the impacts of climate change to support their key decisions in planning for the future, both inside and outside the Federal Government, especially for decisions in renewable energy and in building heating and cooling.

Bradley Hegyi↗

Client/Server data serving for high performance computing

This paper will attempt to examine the industry requirements for shared network data storage and sustained high speed (10's to 100's to thousands of megabytes per second) network data serving via the NFS and FTP protocol suite. It will discuss the current structural and architectural impediments to achieving these sorts of data rates cost effectively today on many general purpose servers and will describe and architecture and resulting product family that addresses these problems. The sustained performance levels that were achieved in the lab will be shown as well as a discussion of early customer experiences utilizing both the HIPPI-IP and ATM OC3-IP network interfaces.

Wood, Chris↗

The performance of disk arrays in shared-memory database machines

In this paper, we examine how disk arrays and shared memory multiprocessors lead to an effective method for constructing database machines for general-purpose complex query processing. We show that disk arrays can lead to cost-effective storage systems if they are configured from suitably small formfactor disk drives. We introduce the storage system metric data temperature as a way to evaluate how well a disk configuration can sustain its workload, and we show that disk arrays can sustain the same data temperature as a more expensive mirrored-disk configuration. We use the metric to evaluate the performance of disk arrays in XPRS, an operational shared-memory multiprocessor database system being developed at the University of California, Berkeley.

Katz, Randy H.↗

Optimizing digital 8mm drive performance

The experience of attaching over 350,000 digital 8mm drives to 85-plus system platforms has uncovered many factors which can reduce cartridge capacity or drive throughput, reduce reliability, affect cartridge archivability and actually shorten drive life. Some are unique to an installation. Others result from how the system is set up to talk to the drive. Many stem from how applications use the drive, the work load that's present, the kind of media used and, very important, the kind of cleaning program in place. Digital 8mm drives record data at densities that rival those of disk technology. Even with technology this advanced, they are extremely robust and, given proper usage, care and media, should reward the user with a long productive life. The 8mm drive will give its best performance using high-quality 'data grade' media. Even though it costs more, good 'data grade' media can sustain the reliability and rigorous needs of a data storage environment and, with proper care, give users an archival life of 30 years or more. Various factors, taken individually, may not necessarily produce performance or reliability problems. Taken in combination, their effects can compound, resulting in rapid reductions in a drive's serviceable life, cartridge capacity, or drive performance. The key to managing media is determining the importance one places upon their recorded data and, subsequently, setting media usage guidelines that can deliver data reliability. Various options one can implement to optimize digital 8mm drive performance are explored.

Schadegg, Gerry↗

Working Toward A National Coordinated Soil Moisture Monitoring Network: Vision, Progress, and Future Directions

Soil moisture is a critical land surface variable, impacting the water, energy, and carbon cycles. While in situ soil moisture monitoring networks are still developing, there is no cohesive strategy or framework to coordinate, integrate, or disseminate these diverse data sources in a synergistic way that can improve our ability to understand climate variability at the national, state, and local levels. Thus, a national strategy is needed to guide network deployment, sustainable network operation, data integration and dissemination, and user-focused product development. The National Coordinated Soil Moisture Monitoring Network (NCSMMN) is a federally led, multi-institution effort that aims to address these needs by capitalizing on existing wide-ranging soil moisture monitoring activities, increasing the utility of observational data, and supporting their strategic application to the full range of decision-making needs. The goals of the NCSMMN are to 1) establish a national “network of networks” that effectively demonstrates data integration and operational coordination of diverse in situ networks; 2) build a community of practice around soil moisture measurement, interpretation, and application—a “network of people” that links data providers, researchers, and the public; and 3) support research and development (R&D) on techniques to merge in situ soil moisture data with remotely sensed and modeled hydrologic data to create user-friendly soil moisture maps and associated tools. The overarching mission of the NCSMMN is to provide coordinated high-quality, nationwide soil moisture information for the public good by supporting applications like drought and flood monitoring, water resource management, agricultural and forestry planning, and fire danger ratings.

C. Bruce Baker↗

Multiscale analysis of a sustained precipitation event

Mesoscale data collected during both the satellite precipitation and cloud experiment and the microburst and severe thunderstorm program are analyzed in order to describe features associated with two distinct mesoscale precipitation events that occurred about 10 hours apart over the region of northern Alabama to central Tennessee in June 1986. Data sets used include mesobeta-scale rawinsonde data, surface mesonet data, RADAP data, and GOES images. The present mesoscale environment involved the merger of Hurricane Bonnie remnants with a preexisting midlatitude short-wave trough.

Knupp, Kevin R.↗

WIS and WIGOS Metadata as the Foundation for a Sustainable Framework for Global Greenhouse Gas Watch Data Exchange

Metadata (data about data) is a critical component of data discovery, description, evaluation, documentation, and preservation. Developing and propagating metadata standards has been a longstanding area of activity in WMO and beyond. The WIS2 and WIGOS metadata models are being actively developed and maintained by dedicated task teams, established under the WMO Expert Team on Metadata. The metadata representations and vocabularies are governed by well-established processes within WMO. These standards are being used in a number of metadata/data exchange activities (e.g., WMO Information System 2.0 (WIS2), WIGOS (WMDR), Climate Data Management Systems (CMDS), etc.). It should also be noted that the application of the WIS2 and WIGOS standards fully support the WMO Unified Data Policy and open data policy as well as greatly enhance the value of observations by fostering data F.A.I.R.ness. Furthermore, the WMO metadata standards can serve as the foundation for a framework that will facilitate metadata mapping between the existing schemas used in well-established data centres, e.g., WMO WDCGG (World Data Centre for Greenhouse Gases) and NOAA ObsPack (Observation Package Data Products) and to automate metadata exchange between data centres as well as with WMO. These activities will play a central role in integrating measurements sponsored by various member countries and organizations to provide a more comprehensive characterization of the temporal and spatial distribution of the greenhouse gases. At the same time, this metadata exchange can lead to member countries and partner organizations improving their current metadata collection process for data discoverability, interoperability, and (re)usability. This presentation will describe metadata activities in the context of WIS2 and WIGOS and how they apply to GGGW data integration via metadata mapping and exchange.

Gao Chen↗