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Airborne Hyperspectral Imagery for the Detection of Agricultural Crop Stress

Multispectral digital imagery from aircraft or satellite is presently being used to derive basic assessments of crop health for growers and others involved in the agricultural industry. Research indicates that narrow band stress indices derived from hyperspectral imagery should have improved sensitivity to provide more specific information on the type and cause of crop stress, Under funding from the NASA Earth Observation Commercial Applications Program (EOCAP) we are identifying and evaluating scientific and commercial applications of hyperspectral imagery for the remote characterization of agricultural crop stress. During the summer of 1999 a field experiment was conducted with varying nitrogen treatments on a production corn-field in eastern Nebraska. The AVIRIS (Airborne Visible-Infrared Imaging Spectrometer) hyperspectral imager was flown at two critical dates during crop development, at two different altitudes, providing images with approximately 18m pixels and 3m pixels. Simultaneous supporting soil and crop characterization included spectral reflectance measurements above the canopy, biomass characterization, soil sampling, and aerial photography. In this paper we describe the experiment and results, and examine the following three issues relative to the utility of hyperspectral imagery for scientific study and commercial crop stress products: (1) Accuracy of reflectance derived stress indices relative to conventional measures of stress. We compare reflectance-derived indices (both field radiometer and AVIRIS) with applied nitrogen and with leaf level measurement of nitrogen availability and chlorophyll concentrations over the experimental plots (4 replications of 5 different nitrogen levels); (2) Ability of the hyperspectral sensors to detect sub-pixel areas under crop stress. We applied the stress indices to both the 3m and 18m AVIRIS imagery for the entire production corn field using several sub-pixel areas within the field to compare the relative sensitivity of each stress index; and (3) Comparative sensitivity of stress indices to realistic measurement uncertainties. We compare the stress indices calculated with several levels of spectral uncertainty (by shifting the wavelengths) and reflectance uncertainty (by systematically varying the reflectance retrieval code initialization).

Cassady, Philip E.↗

The use of LANDSAT digital data and computer-implemented techniques for an agricultural application

Agricultural applications procedures are described for use of LANDSAT digital data and other digitalized data (e.g., soils). The results of having followed these procedures are shown in production estimates for cotton and soybeans in Washington County, Mississippi. Examples of output products in both line printer and map formats are included, and a product adequacy assessment is made.

Joyce, A. T.↗

Agricultural land cover mapping in the context of a geographically referenced digital information system

The introduction of soil map information to the land cover mapping process can improve discrimination of land cover types and reduce confusion among crop types that may be caused by soil-specific management practices and background reflectance characteristics. Multiple dates of LANDSAT MSS digital were analyzed for three study areas in northern Missouri to produce cover types for major agricultural land cover classes. Digital data bases were then developed by adding ancillary data such as digitized soil and transportation network information to the LANDSAT-derived cover type map. Procedures were developed to manipulate the data base parameters to extract information applicable to user requirements. An agricultural information system combining such data can be used to determine the productive capacity of land to grow crops, fertilizer needs, chemical weed control rates, irrigation suitability, and trafficability of soil for planting.

Stoner, E. R.↗

Separation of man-made and natural patterns in high-altitude imagery of agricultural areas

A nonstationary linear digital filter is designed and implemented which extracts the natural features from high-altitude imagery of agricultural areas. Essentially, from an original image a new image is created which displays information related to soil properties, drainage patterns, crop disease, and other natural phenomena, and contains no information about crop type or row spacing. A model is developed to express the recorded brightness in a narrow-band image in terms of man-made and natural contributions and which describes statistically the spatial properties of each. The form of the minimum mean-square error linear filter for estimation of the natural component of the scene is derived and a suboptimal filter is implemented. Nonstationarity of the two-dimensional random processes contained in the model requires a unique technique for deriving the optimum filter. Finally, the filter depends on knowledge of field boundaries. An algorithm for boundary location is proposed, discussed, and implemented.

Samulon, A. S.↗

A framework for challenges and solutions in biodesign research

The bioeconomy represents an advanced economic paradigm that builds upon previous agricultural, industrial, and digital economic models. It seeks to tackle critical global challenges such as resource scarcity, escalating healthcare demands, and environmental degradation. At the heart of the bioeconomy is biomanufacturing, which uses natural or engineered enzymes or cell factories built from ​biological components like promoters, terminators, regulatory sequences, reporters, and functional genes into various chassis hosts (including animal, microbial, plant, and de novo systems) to create products such as food, energy, medicine, materials, chemicals, and engineered tissue/organs. An enabler of biomanufacturing is biodesign – also known as biosystems design and closely related to synthetic biology or engineering biology. This interdisciplinary field aims to understand and predictably modify existing life forms or create entirely new biological entities/systems using rational engineering strategies and automated design tools. Through these capabilities, biodesign supports the discovery, optimization, and creation of efficient platforms for biomanufacturing.

59 BASIC BIOLOGICAL SCIENCES↗

Investigation of remote sensing techniques as inputs to operational resource management

The author has identified the following significant results. Visual interpretation of 1:125,000 color LANDSAT prints produced timely level 1 maps of accuracies in excess of 80% for agricultural land identification. Accurate classification of agricultural land via digital analysis of LANDSAT CCT's required precise timing of the date of data collection with mid to late June optimum for western South Dakota. The LANDSAT repetitive nine day cycle over the state allowed the surface areas of stockdams and small reservoir systems to be monitored to provide a timely approximation of surface water conditions on the range. Combined use of DIRS, K-class, and LANDSAT CCT's demonstrated the ability to produce aspen maps of greater detail and timeliness than was available using US Forest Service maps. Visual temporal analyses of LANDSAT imagery improved highway map drainage information and were used to prepare a seven county drainage network. An optimum map of flood-prone areas was developed, utilizing high altitude aerial photography and USGS maps.

Schmer, F. A.↗

Spatial variation analyses of Thematic Mapper data for the identification of linear features in agricultural landscapes

A need exists for digitized information pertaining to linear features such as roads, streams, water bodies and agricultural field boundaries as component parts of a data base. For many areas where this data may not yet exist or is in need of updating, these features may be extracted from remotely sensed digital data. This paper examines two approaches for identifying linear features, one utilizing raw data and the other classified data. Each approach uses a series of data enhancement procedures including derivation of standard deviation values, principal component analysis and filtering procedures using a high-pass window matrix. Just as certain bands better classify different land covers, so too do these bands exhibit high spectral contrast by which boundaries between land covers can be delineated. A few applications for this kind of data are briefly discussed, including its potential in a Universal Soil Loss Equation Model.

Pelletier, R. E.↗

Agricultural land cover mapping with the aid of digital soil survey data

A study is recounted which assessed the effect of stratifying multidate Landsat MSS data on land cover classification accuracy. The study area covered 49,184 ha (121,534 acres) in Gentry County in northwestern Missouri. A pixel-by-pixel comparison of the two land cover classifications with field-verified land cover indicated improvements in identification of all cover types when land areas were stratified by soils. The introduction of soil map information to the land cover mapping process can improve discrimination of land cover types and reduce confusion among crop types that may be caused by soil-specific management practices, soil-induced crop development differences, and background reflectance characteristics.

Stoner, E. R.↗

Detecting transition in agricultural systems

Remote sensing of agricultural phenomena has been largely concentrated on analysis of agriculture at the field level. Concern has been to identify crop status, crop condition, and crop distribution, all of which are spatially analyzed on a field-by-field basis. A more general level of abstraction is the agricultural system, or the complex of crops and other land cover that differentiate various agricultural economies. The paper reports on a methodology to assist in the analysis of the landscape elements of agricultural systems with Landsat digital data. The methodology involves tracing periods of photosynthetic activity for a fixed area. Change from one agricultural system to another is detected through shifts in the intensity and periodicity of photosynthetic activity as recorded in the radiometric return to Landsat. The Landsat-derived radiometric indicator of photosynthetic activity appears to provide the ability to differentiate agricultural systems from each other as well as from conterminous natural vegetation.

Neary, P. J.↗

Application of ERTS-1 imagery to land use, forest density and soil investigations in Greece

Photographic and digital imagery received from ERTS-1 was analyzed and evaluated as to its usefulness for the assessment of agricultural and forest land resources. Black and white, and color composite imagery provided spectral and spatial data, which, when matched with temporal land information, provided the basis for a semidetailed land use and forest site evaluation cartography. Color composite photographs have provided some information on the status of irrigation of agricultural lands. Computer processed digital imagery was successfully used for detailed crop classification and semidetailed soil evaluation. The results and techniques of this investigation are applicable to ecological and geological conditions similar to those prevailing in the Eastern Mediterranean.

Yassoglou, N. J.↗

Applications of TIMS data in agricultural areas and related atmospheric considerations

While much of traditional remote sensing in agricultural research was limited to the visible and reflective infrared, advances in thermal infrared remote sensing technology are adding a dimension to digital image analysis of agricultural areas. The Thermal Infrared Multispectral Scanner (TIMS) an airborne sensor having six bands over the nominal 8.2 to 12.2 m range, offers the ability to calculate land surface emissivities unlike most previous singular broadband sensors. Preliminary findings on the utility of the TIMS for several agricultural applications and related atmospheric considerations are discussed.

Pelletier, R. E.↗

Prime agricultural land monitoring and assessment component of the California Integrated Remote Sensing System

The use of digital LANDSAT techniques for monitoring agricultural land use conversions was studied. Two study areas were investigated: one in Ventura County and the other in Fresno County (California). Ventura test site investigations included the use of three dates of LANDSAT data to improve classification performance beyond that previously obtained using single data techniques. The 9% improvement is considered highly significant. Also developed and demonstrated using Ventura County data is an automated cluster labeling procedure, considered a useful example of vertical data integration. Fresno County results for a single data LANDSAT classification paralleled those found in Ventura, demonstrating that the urban/rural fringe zone of most interest is a difficult environment to classify using LANDSAT data. A general raster to vector conversion program was developed to allow LANDSAT classification products to be transferred to an operational county level geographic information system in Fresno.

Estes, J. E.↗

Large Area Crop Inventory Experiment (LACIE). Detecting and monitoring agricultural vegetative water stress over large areas using LANDSAT digital data

The author has identified the following significant results. The Green Number Index technique which uses LANDSAT digital data from 5X6 nautical mile sampling frames was expanded to evaluate its usefulness in detecting and monitoring vegetative water stress over the Great Plains. At known growth stages for wheat, segments were classified as drought or non drought. Good agreement was found between the 18 day remotely sensed data and a weekly ground-based crop moisture index. Operational monitoring of the 1977 U.S.S.R. and Australian wheat crops indicated drought conditions. Drought isoline maps produced by the Green Number Index technique were in good agreement with conventional sources.

Thompson, D. R.↗

Anaysis of the quality of image data required by the LANDSAT-4 Thematic Mapper and Multispectral Scanner

The spatial, geometric, and radiometric qualities of LANDSAT 4 thematic mapper (TM) and multispectral scanner (MSS) data were evaluated by interpreting, through visual and computer means, film and digital products for selected agricultural and forest cover types in California. Multispectral analyses employing Bayesian maximum likelihood, discrete relaxation, and unsupervised clustering algorithms were used to compare the usefulness of TM and MSS data for discriminating individual cover types. Some of the significant results are as follows: (1) for maximizing the interpretability of agricultural and forest resources, TM color composites should contain spectral bands in the visible, near-reflectance infrared, and middle-reflectance infrared regions, namely TM 4 and TM % and must contain TM 4 in all cases even at the expense of excluding TM 5; (2) using enlarged TM film products, planimetric accuracy of mapped poins was within 91 meters (RMSE east) and 117 meters (RMSE north); (3) using TM digital products, planimetric accuracy of mapped points was within 12.0 meters (RMSE east) and 13.7 meters (RMSE north); and (4) applying a contextual classification algorithm to TM data provided classification accuracies competitive with Bayesian maximum likelihood.

Colwell, R. N.↗

Computer Aids Delineation Of Boundaries In Farmlands

Computer-aided stratification (CAS) procedure developmental procedure of image-processing computer equipment and programs partly automating delineation of boundaries between areas. These areas, "primary sampling units", are images of primarily agricultural lands composed by melding digital Landsat Thematic Mapper data and Digital Line Graph data from United States Geological Survey. CAS output data used as inputs for subsequent sampling procedures from which statistics on uses of agricultural lands developed.

Slyle, R.↗

Using Landsat digital data to detect moisture stress

A technique utilizing transformed Landsat digital data for detection of agricultural drought was empirically defined during the 1976 South Dakota drought. During 1977, the procedure was expanded to the Great Plains for evaluation as a technique for detecting and monitoring vegetative water stress over large areas. The technique, Green Index Number (GIN), uses Landsat digital data from 5 by 6 nautical mile sampling frames (segments) to indicate when the vegetation within the segment is undergoing drought. At known growth stages for wheat, segments were classified as drought or non-drought areas. The remote-sensing-based information was compared to a weekly ground-based index (Crop Moisture Index) provided by the United States Department of Commerce. This comparison demonstrated a high degree of agreement between the 18-day remote sensing technique and the ground-based weekly data. Maps based on GIN of parts of the USSR and Australia were produced with a two-week lag and later compared with other crop assessments of crop conditions in these areas. These maps were judged to be in general agreement with the other data sources.

Thompson, D. R.↗

Application of LANDSAT digital data for monitoring drought

A technique utilizing transformed LANDSAT digital data for detection of agricultural vegetative water stress was developed during the 1976 South Dakota drought, and expanded to the U.S. Great Plains the following year to evaluate its effectiveness in detecting and monitoring vegetative stress water stress over large areas. This technique, the green index number (GIN), indicated when the vegetation within a segment was undergoing stress. Segments were classified as either moisture-stressed or normal using remote sensing techniques combined with a knowledge of crop condition. The remote sensing-based information was compared to a weekly ground-based index (the crop moisture index) provided by the U.S. Dept. of Commerce. The approaches used and the results from the GIN monitoring program are presented.

Thompson, D. R.↗