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At least 37 records · Page 2

SOWFA Large-Eddy Simulation of a Diurnal Cycle at the SWiFT Site

These are large-eddy simulation (LES) data output from the Simulator for Wind Farm Applications (SOWFA) with internal mesoscale-to-microscale coupling. A diurnal cycle was simulated over the Scaled Wind Farm Technology (SWIFT) facility near Lubbock, Texas, from 2013-11-08 12:00:00 UTC to 2013-11-09 12:00:00 UTC. Indirect profile assimilation was used to enforce nonstationary mesoscale conditions. Mesoscale forcing data were extracted from WRF numerical weather prediction outputs or derived from observations at SWiFT.

17 WIND ENERGY↗

The diurnal cycle of entrainment and detrainment in LES of the Southern Ocean driven by observed surface fluxes and waves

Empirical rules for both entrainment and detrainment are developed from LES of the Southern Ocean boundary layer when the turbulence, stratification, and shear cannot be assumed to be in equilibrium with diurnal variability in surface flux and wave (Stokes drift) forcing. A major consequence is the failure of downgradient eddy viscosity, which becomes more serious with Stokes drift and is overcome by relating the angle between the stress and shear vectors to the orientations of Lagrangian shear to the surface and of local Eulerian shear over 5 m. Thus, the momentum flux can be parameterized as a stress magnitude and this empirical direction. In addition, the response of a deep boundary layer to sufficiently strong diurnal heating includes boundary layer collapse and the subsequent growth of a morning boundary layer, whose depth is empirically related to the time history of the forcing, as are both morning detrainment and afternoon entrainment into weak diurnal stratification. Below the boundary layer, detrainment rules give the maximum buoyancy flux and its depth, as well a specific stress direction. Another rule relates both afternoon and nighttime entrainment depth and buoyancy flux to surface layer turbulent kinetic energy production integrals. These empirical relationships are combined with rules for boundary layer transport to formulate two parameterizations; one based on eddy diffusivity and viscosity profiles and another on flux profiles of buoyancy and of stress magnitude. Evaluations against LES fluxes show the flux profiles to be more representative of the diurnal cycle, especially with Stokes drift.

54 ENVIRONMENTAL SCIENCES↗

Parameterization of the Elevated Convection With a Unified Convection Scheme (UNICON) and Its Impacts on the Diurnal Cycle of Precipitation

To improve the simulation of nocturnal precipitation, we develop a parameterization for the elevated convection that is launched from the level of maximum grid-mean moist static energy, when grid-mean vertical flow is upward at the launching interface. The parameterized elevated convection is forced by both cold pool-driven and partially resolved external mesoscale organized flows. Properties of the external mesoscale flow are estimated from grid-mean vertical velocity and three dimensional advection tendencies of temperature and moisture. The new parameterization is implemented into a unified convection scheme (UNICON) and tested for both the single-column case at the Southern Great Plain (SGP) site in US and in global simulations. At the SGP site, the parameterized elevated convection strengthens nocturnal convection, increases nocturnal precipitation, and better simulates the observed diurnal cycle of precipitation. It appears that the elevated and surface-based convections interact with each other by stabilizing the atmospheric column, which affects subsequent convection. Global simulation shows that the elevated convection mostly occurs over the continents during the night, and also over the oceanic mid-latitude warm air advection and storm track regions during summer. Without degrading global mean climate, the elevated convection improves the simulation of nocturnal precipitation in the mid-US but simulates somewhat strong nocturnal precipitation in northeastern Asia. It seems that a key to simulate observed nocturnal precipitation is to appropriately parameterize the impacts of external organized flow on the elevated convection.

54 ENVIRONMENTAL SCIENCES↗

Measurement-driven large-eddy simulations of a diurnal cycle during a wake-steering field campaign

Abstract. High-fidelity flow modeling with data assimilation enables accurate representation of the wind farm operating environment under realistic, nonstationary atmospheric conditions. Capturing the temporal evolution of the turbulent atmospheric boundary layer is critical to understanding the behavior of wind turbines under operating conditions with simultaneously varying inflow and control inputs. This paper has three parts: the identification of a case study during a field evaluation of wake steering; the development of a tailored mesoscale-to-microscale coupling strategy that resolved local flow conditions within a large-eddy simulation (LES), using observations that did not completely capture the wind and temperature fields throughout the simulation domain; and the application of this coupling strategy to validate high-fidelity aeroelastic predictions of turbine performance and wake interactions with and without wake steering. The case study spans 4.5 h after midnight local time, during which wake steering was toggled on and off five times, achieving yaw offset angles ranging from 0 to 17°. To resolve nonstationary nighttime conditions that exhibited shear instabilities, the turbulence field was evolved starting from the diurnal cycle of the previous day. These background conditions were then used to drive wind farm simulations with two different models: an LES with actuator disk turbines and a steady-state engineering wake model. Subsequent analysis identified two representative periods during which the up- and downstream turbines were most nearly aligned with the mean wind direction and had observed yaw offsets of 0 and 15°. Both periods corresponded to partial waking on the downstream turbine, which had errors in the LES-predicted power of 4 % and 6 %, with and without wake steering. The LES was also able to capture conditions during which an upstream turbine wake induced a speedup at a downstream turbine and increased power production by up to 13 %.

17 WIND ENERGY↗

How can we combine urban cooling strategies to effectively cool cities over the entire diurnal cycle?

The urban heat island effect generally peaks in the night/evening hours and, in some cases, an urban cool island effect during daytime has been reported. These patterns are observed mainly because of the widespread use of impervious and thermally massive materials (like concrete and asphalt) in the built environment and their ability to store energy during the daytime and release it at night. Unfortunately, most urban cooling strategies, such as cool (white), green, and blue spaces, provide better thermal performance during the daytime than at night. Hence, such solutions are not ideal for nighttime heat mitigation. In this study, we investigate the effect of the thermal storage capacity of existing buildings on nighttime urban air temperature for a hot arid city—Phoenix, and a hot humid city—Atlanta. The study uses regional scale atmospheric modeling to compare the nighttime urban cooling capability of thermally light buildings (Cross-laminated timber buildings in this case) with concrete buildings. The results show that the adoption of thermally light buildings reduce nighttime air temperatures, and slightly increases daytime air temperatures. On the other hand, cool roof adaption could reduce urban air temperature significantly during the daytime and slightly at night. Therefore, together with cool roofs, thermally light buildings may be able to cool the surrounding air by an average of about 1°C throughout the diurnal cycle, providing thermal comfort and reducing cooling demand during all hours.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Quantifying Seasonal and Diurnal Cycles of Solar‐Induced Fluorescence With a Novel Hyperspectral Imager

Abstract Solar‐induced fluorescence (SIF) is a proxy of ecosystem photosynthesis that often scales linearly with gross primary productivity (GPP) at the canopy scale. However, the mechanistic relationship between GPP and SIF is still uncertain, especially at smaller temporal and spatial scales. We deployed a ultra‐hyperspectral imager over two grassland sites in California throughout a soil moisture dry down. The imager has high spatial resolution that limits mixed pixels, enabling differentiation between plants and leaves within one scene. We find that imager SIF correlates well with diurnal changes in leaf‐level physiology and gross primary productivity under well‐watered conditions. These relationships deteriorate throughout the dry down event. Our results demonstrate an advancement in SIF imaging with new possibilities in remotely sensing plant canopies from the leaf to the ecosystem. These data can be used to resolve outstanding questions regarding SIF's meaning and usefulness in terrestrial ecosystem monitoring.

60 APPLIED LIFE SCIENCES↗

Single-cell RNA sequencing of batch Chlamydomonas cultures reveals heterogeneity in their diurnal cycle phase

The photosynthetic unicellular alga Chlamydomonas (Chlamydomonas reinhardtii) is a versatile reference for algal biology because of its ease of culture in the laboratory. Genomic and systems biology approaches have previously described transcriptome responses to environmental changes using bulk data, thus representing the average behavior from pools of cells. Here, we apply single-cell RNA sequencing (scRNA-seq) to probe the heterogeneity of Chlamydomonas cell populations under three environments and in two genotypes differing by the presence of a cell wall. First, we determined that RNA can be extracted from single algal cells with or without a cell wall, offering the possibility to sample natural algal communities. Second, scRNA-seq successfully separated single cells into nonoverlapping cell clusters according to their growth conditions. Cells exposed to iron or nitrogen deficiency were easily distinguished despite a shared tendency to arrest photosynthesis and cell division to economize resources. Notably, these groups of cells not only recapitulated known patterns observed with bulk RNA-seq but also revealed their inherent heterogeneity. A substantial source of variation between cells originated from their endogenous diurnal phase, although cultures were grown in constant light. We exploited this result to show that circadian iron responses may be conserved from algae to land plants. We document experimentally that bulk RNA-seq data represent an average of typically hidden heterogeneity in the population.

59 BASIC BIOLOGICAL SCIENCES↗

The landscape of Chlamydomonas histone H3 lysine 4 methylation reveals both constant features and dynamic changes during the diurnal cycle

Chromatin modifications are epigenetic regulatory features with major roles in various cellular events, yet they remain understudied in algae. Here, we interrogated the genome-wide distribution pattern of mono- and trimethylated histone H3 lysine 4 (H3K4) using chromatin-immunoprecipitation followed by deep-sequencing (ChIP-seq) during key phases of the Chlamydomonas cell cycle: early G 1 phase, Zeitgeber Time 1 (ZT1), when cells initiate biomass accumulation, S/M phase (ZT13) when cells are replicating DNA and undergoing mitosis, and late G 0 phase (ZT23) when they are quiescent. Tri-methylated H3K4 was predominantly enriched at transcription start sites of the majority of protein coding genes (85%). The likelihood of a gene being marked by H3K4me3 correlated with it being transcribed at some point during the life cycle but not necessarily by continuous active transcription, as exemplified by early zygotic genes, which may remain transcriptionally dormant for thousands of generations between sexual cycles. The exceptions to this rule were around 120 loci, some of which encode non-poly-adenylated transcripts, such as small nuclear RNAs and replication-dependent histones that had H3K4me3 peaks only when they were being transcribed. Mono-methylated H3K4 was the default state for the vast majority of histones that were bound outside of transcription start sites and terminator regions of genes. A small fraction of the genome that was depleted of any H3 lysine 4 methylation was enriched for DNA cytosine methylation and the genes within these DNA methylation islands were poorly expressed. Besides marking protein coding genes, H3K4me3 ChIP-seq data served also as a annotation tool for validation of hundreds of long non-coding RNA genes.

59 BASIC BIOLOGICAL SCIENCES↗

Evaluation of the Near-Surface Variables in the HRRR Weather Model Using Observations from the ARM SGP Site

Abstract The performance of version 4 of the NOAA High-Resolution Rapid Refresh (HRRR) numerical weather prediction model for near-surface variables, including wind, humidity, temperature, surface latent and sensible fluxes, and longwave and shortwave radiative fluxes, is examined over the Atmospheric Radiation Measurement (ARM) Southern Great Plains (SGP) region. The study evaluated the model’s bias and bias-corrected mean absolute error relative to the observations on different time scales. Forecasts of near-surface geophysical variables at five SGP sites (HRRR at 3-km scale) were found to agree well with observations, but some consistent observation–forecast differences also occurred. Sensible and latent heat fluxes are the most challenging variables to be reproduced. The diurnal cycle is the main temporal scale affecting observation–forecast differences of the near-surface variables, and almost all of the variables showed different biases throughout the diurnal cycle. Results show that the overestimation of downward shortwave and the underestimation of downward longwave radiative flux are the two major biases found in this study. The timing and magnitude of downward longwave flux, wind speed, and sensible and latent heat fluxes are also different with contributions from model representations, data assimilation limitations, and differences in scales between HRRR and SGP sites. The positive bias in downward shortwave and negative bias in longwave radiation suggests that the model is underestimating cloud fraction in the study domain. The study concludes by showing a brief comparison with version 3 of the HRRR and shows that version 4 has better performance in almost all near-surface variables. Significance Statement A correct representation of the near-surface variables is important for numerical weather prediction models. This study investigates the capability of the latest NOAA High-Resolution Rapid Refresh (HRRRv4) model in simulating the near-surface variables by comparing against the Atmospheric Radiation Measurement (ARM) Southern Great Plains (SGP) in situ observations. Among others, we find that the surface heat fluxes, such as sensible and latent heat fluxes, are the most difficult variables to be reproduced. This study also shows that the diurnal cycle has the dominant impact on the model’s performance, which means the majority of the outputted near-surface variables have the strong diurnal cycle in their bias errors.

54 ENVIRONMENTAL SCIENCES↗

Diurnal MCSs Precede the Genesis of Tropical Cyclone Mora (2017): The Role of Convectively Forced Gravity Waves

In this work, a novel high-resolution regional reanalysis is used to investigate the mesoscale processes that preceded the formation of Tropical Cyclone (TC) Mora (2017). Both satellite observations and the regional reanalysis show early morning mesoscale convective systems (MCSs) persistently initiated and organized in the downshear quadrant of the preexisting tropical disturbance a few days prior to the genesis of TC Mora. The diurnal MCSs gradually enhanced the meso-α-scale vortex near the center of the preexisting tropical disturbance through vortex stretching, providing a vorticity-rich and moist environment for the following burst of deep convection and enhancement of the meso-β-scale vortex. The regional reanalysis shows that the gravity waves that radiated from afternoon convection over the northern coast of the Bay of Bengal might play an important role in modulating the diurnal cycle of pregenesis MCSs. The diurnal convectively forced gravity waves increased the tropospheric stability, reduced the column saturation fraction, and suppressed deep convection within the preexisting tropical disturbance from noon to evening. A similar quasi-diurnal cycle of organized deep convection prior to TC genesis has also been observed over other basins. However, modeling studies are needed to conclusively demonstrate the relationships between the gravity waves and pregenesis diurnal MCSs. Also, whether diurnal gravity waves play a similar role in modulating the pregenesis deep convection in other TCs is worth future investigations.

54 ENVIRONMENTAL SCIENCES↗

Island Rainfall Enhancement in the Maritime Continent

Abstract The hypothesis that the islands of the Maritime Continent (MC) enhance total rainfall and time‐mean upward motion is tested using a convection‐permitting regional model. Sensitivity experiments with the islands removed greatly diminish both rainfall and upward motion, supporting the hypothesis. We examine the individual factors in this enhancement, isolating the impacts of the diurnal cycle from those of basic‐state (i.e., constant) forcing of orography and the land surface. We find that the basic‐state forcing by land is the only factor that substantially enhances total island rainfall, specifically through the enhancement of mean surface heat fluxes. The diurnal cycle and orographic forcing, however, substantially enhance rainfall in the seas surrounding the islands. Moreover, the diurnal cycle is found to be essential for promoting mesoscale circulations on the spatial scales of the islands, which are critical to both the upscale growth of deep convection and the most extreme rainfall rates.

Ruppert, Jr., James H.↗

Land Surface Temperature from GOES-East and GOES-West

Land surface temperature (LST) is an important climate parameter that controls the surface energy budget. For climate applications, information is needed at the global scale with representation of the diurnal cycle. To achieve global coverage there is a need to merge about five independent geostationary (GEO) satellites that have different observing capabilities. An issue of practical importance is the merging of independent satellite observations in areas of overlap. An optimal approach in such areas could eliminate the need for redundant computations by differently viewing satellites. We use a previously developed approach to derive information on LST from GOES-East (GOES-E), modify it for application to GOES-West (GOES-W) and implement it simultaneously across areas of overlap at 5-km spatial resolution. We evaluate the GOES-based LST against in situ observations and an independent MODIS product for the period of 2004–09. The methodology proposed minimizes differences between satellites in areas of overlap. The mean and median values of the differences in monthly mean LST retrieved from GOES-E and GOES-W at 0600 UTC for July are 0.01 and 0.11 K, respectively. Similarly, at 1800 UTC the respective mean and median value of the differences were 0.15 and 1.33 K. These findings can provide guidelines for potential users to decide whether the reported accuracy based on one satellite alone, meets their needs in area of overlap. Since the 6 yr record of LST was produced at hourly time scale, the data are well suited to address scientific issues that require the representation of LST diurnal cycle or the diurnal temperature range (DTR).

54 ENVIRONMENTAL SCIENCES↗

Observed Temperature and Moisture Advection Characteristics in the Southern Great Plains

Until recently, advection profiles in the planetary boundary layer have been difficult to quantify from observations. As a result, not much is known about its basic characteristics, like magnitude and diurnal cycles, or how these differ as a function of large-scale environments. Here, to provide insight into advective characteristics, a Green’s Theorem–based method for calculating profiles of advection in the lowest 3 km from an array of ground-based thermodynamic and kinematic profiling instruments has been applied to 2 years of observations from the Atmospheric Radiation Measurement (ARM) Southern Great Plains (SGP) observing site. Since advection largely depends on synoptic-scale forcing, a self-organizing map (SOM) was used to classify days based on mean sea level pressure analyses; from that, the diurnal evolution of vertical profiles of advection for different synoptic environments was quantified. The overall mean magnitude of the potential temperature advection is approximately ±3 K h −1 , while the moisture advection is approximately ±1.5 g kg −1 h −1 , with substantial variability in the sign and magnitude of the advective tendencies at different heights and throughout the diurnal cycle. Advection magnitude is strongly connected to the strength of synoptic-scale forcing, which varies depending on the time of year. Variability in advection is larger for potential temperature than it is for moisture, and strongly forced environments, like midlatitude cyclones, feature greater variability in the advection magnitude than weakly forced or quiescent environments.

advection↗

Amazonian Moisture Recycling Revisited Using WRF With Water Vapor Tracers

Previous studies have estimated that 25%–35% of Amazonian precipitation comes from evapotranspiration (ET) within the basin. However, due to simplifying assumptions of traditional models, these studies primarily focus on large spatial and temporal scales. This study is the first to analyze the moisture of Amazonian origin at the annual to daily timescale in four different subregions of the Amazon. We analyze the sources, sinks and stores of moisture that originates as Amazonian ET. To do this, we use the Weather Research and Forecast (WRF) regional meteorological model with the added capability of water vapor tracers to track this moisture. Moisture of Amazonian origin shows strong annual and semi-annual signals, with contrasting behavior between the northern and southern parts of the basin. The tracers reveal a strong diurnal cycle of Amazonian water vapor which had not been previously reported. This signal is related to the diurnal cycle of ET, convective precipitation and advected moisture. ET's contribution to atmospheric moisture increases from early morning into the afternoon. Some of this moisture is rained out through convective storms in the early evening. Later in the night and following morning, strong winds associated with the South American Low Level Jet advect moisture downwind. Overall, the beating pattern becomes apparent when visualizing the Amazonian water vapor as an animation.

54 ENVIRONMENTAL SCIENCES↗

Incorporating the Effect of Large‐Scale Vertical Motion on Convection Through Convective Mass Flux Adjustment in E3SMv2

Abstract Recent observational studies suggest that the large‐scale dynamical forcing (vertical motion) plays important roles in deep convection development. In this study we propose a convective mass flux adjustment (MAdj) approach to represent the dynamical effects of large‐scale vertical motion on convection in the Department of Energy's Energy Exascale Earth System Model version 2 (E3SMv2). With MAdj, convection is enhanced (suppressed) when there is large‐scale ascending (descending) motion at the planetary boundary layer top. The coupling of convection with large‐scale circulation significantly improves the simulation of climate variability in E3SMv2 across multiple scales from the diurnal cycle, convectively coupled equatorial waves, to the Madden‐Julian Oscillation (MJO). The standard E3SMv2 tends to simulate overly weak diurnal amplitude of precipitation and overly weak variance of convectively coupled equatorial Kelvin and westward inertio‐gravity (WIG) waves. It also fails to simulate the essential characteristics of the MJO: continuous eastward propagation. With MAdj, the amplitude of diurnal cycle of precipitation is systematically increased and its probability density distribution is much closer to observations. The MAdj can also simulate more realistic eastward propagation of the MJO and much stronger convectively coupled Kelvin and WIG waves. Moreover, the MAdj approach slightly improves the climatology simulations in precipitation, cloud, radiation, circulation, temperature, and moisture fields, with overall root‐mean‐square error (RMSE) of major climatological fields reduced by about 2%. The MAdj approach suppresses excessive grid‐scale precipitation, reducing precipitation wet biases over South China Sea, Philippine Sea, Himalayas, and South Pacific Convergence Zone in western Pacific in summer.

54 ENVIRONMENTAL SCIENCES↗

Diurnal Variation of the Planetary Boundary Layer Height Observed from GNSS Radio Occultation and Radiosonde Soundings over the Southern Great Plains

>The planetary boundary layer (PBL) height (PBLH) is a key physical parameter of the PBL affected by numerous physical processes within the boundary layer. Specifically, the PBLH over land exhibits large spatial and temporal variation across different geographical regions. In this study, the Constellation Observing System for Meteorology, Ionosphere and Climate (COSMIC) radio occultation (RO) profiles and high-resolution radiosonde profiles from 2007 to 2013 were analyzed to estimate the diurnal cycle of the PBLH over the Southern Great Plains (SGP) in the United States. Large variations in PBLH derived from radiosonde temperature, moisture, and refractivity are observed on seasonal scales. COSMIC RO is capable of observing diurnal and seasonal variations in the terrestrial PBLH over the SGP region. Annual mean diurnal amplitude of approximately 250 m in the terrestrial PBLH was observed, with maxima occurring at around 1500 local solar time (LST) in both the collocated radiosondes and COSMIC RO profiles. Seasonal changes in the PBLH diurnal cycles ranging from approximately 100 to 400 m were also observed. Such PBL diurnal and seasonal changes can be further incorporated into PBL parameterizations to help improve weather and climate model prediction. Significance Statement. The atmospheric planetary boundary layer (PBL) and its height (PBLH) control many atmospheric processes that affect our everyday lives. Observations of the PBL are usually limited to radiosondes at limited time intervals. GNSS radio occultation (RO) provide high-vertical-resolution atmospheric observations that are ideal for PBL study. This study demonstrates that the GNSS RO is capable of capturing the diurnal and seasonal variations of the PBLH over the southern Great Plains (SGP) well as compared to the collocated radiosonde observations.

54 ENVIRONMENTAL SCIENCES↗