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DOE OSTI2024

Gyrokinetic electromagnetic particle simulations in triangular meshes with C1 finite elements

The triangular mesh-based gyrokinetic scheme enables comprehensive axis-to-edge studies across the entire plasma volume. Our approach employs triangular finite elements with first-derivative continuity (C1), building on previous work to facilitate gyrokinetic simulations. Additionally, we have adopted the mixed variable/pullback scheme for gyrokinetic electromagnetic particle simulations. The filter-free treatment in the poloidal cross-section with triangular meshes introduces unique features and challenges compared to previous treatments using structured meshes. Our implementation has been validated through benchmarks using ITPA-toroidicity-induced Alfvén eigenmode parameters, showing its capability in moderate to small electron skin depth regimes. Additional examinations using experimental parameters confirm its applicability to realistic plasma conditions.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2026

Verification of global gyrokinetic simulation of low frequency mode excited by thermal plasma in spherical tokamak

A low frequency Alfven eigenmode in the ST40 spherical tokamak (ST) is found to be resonantly excited by thermal ions from global gyrokinetic GTC simulations. The analyses of phase-space resonances and wave-particle energy exchanges show that the Beta-induced Alfvén-Acoustic Eigenmode (BAAE) is primarily driven unstable by thermal ions, but is stabilized by energetic particles (EPs). When all kinetic effects are artificially suppressed, GTC simulations in the ideal magnetohydrodynamic (MHD) limit confirm the existence of the MHD eigenmode with a frequency in the BAAEs gap, as previously found by the ideal MHD code NOVA. The kinetic effects of thermal ions induce a frequency downshift compared to the stable BAAE in the MHD simulations. These results support the verification for global gyrokinetic simulations of the BAAE in the ST. However, the simulations do not explain the experimental observations of the BAAE in the ST40, possibly owing to the limitation of the collisionless gyrokinetic Monte Carlo model for the EPs.

Alfvén eigenmode↗
DOE OSTI2020

Electromagnetic full-$f$ gyrokinetics in the tokamak edge with discontinuous Galerkin methods

Here, we present an energy-conserving discontinuous Galerkin scheme for the full-f electromagnetic gyrokinetic system in the long-wavelength limit. We use the symplectic formulation and solve directly for ∂A II /∂t, the inductive component of the parallel electric field, using a generalized Ohm’s law derived directly from the gyrokinetic equation. Linear benchmarks are performed to verify the implementation and show that the scheme avoids the Amp`ere cancellation problem. We perform a nonlinear electromagnetic simulation in a helical open-field-line system as a rough model of the tokamak scrape-off layer using parameters from the National Spherical Torus Experiment (NSTX). This is the first published nonlinear electromagnetic gyrokinetic simulation on open field lines. Comparisons are made to a corresponding electrostatic simulation.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

Solving gyrokinetic systems with higher-order time dependence

We discuss theoretical and numerical aspects of gyrokinetics as a Lagrangian field theory when the field perturbation is introduced into the symplectic part. A consequence is that the field equations and particle equations of motion in general depend on the time derivatives of the field. The most well-known example is when the parallel vector potential is introduced as a perturbation, where a time derivative of the field arises only in the equations of motion, so an explicit equation for the fields may still be written. We will consider the conceptually more problematic case where the time-dependent fields appear in both the field equations and equations of motion, but where the additional term in the field equations is formally small. The conceptual issues were described by Burby (J. Plasma Phys., vol. 82 (3), 2016, 905820304): these terms lead to apparent additional degrees of freedom to the problem, so that the electric field now requires an initial condition, which is not required in low-frequency (Darwin) Vlasov–Maxwell equations. Also, the small terms in the Euler–Lagrange equations are a singular perturbation, and these two issues are interlinked. For well-behaved problems the apparent additional degrees of freedom are spurious, and the physically relevant solution may be directly identified. Because we needed to assume that the system is well behaved for small perturbations when deriving gyrokinetic theory, we must continue to assume that when solving it, and the physical solutions are thus the regular ones. The spurious nature of the singular degrees of freedom may also be seen by changing coordinate systems so the varying field appears only in the Hamiltonian. We then describe how methods appropriate for singular perturbation theory may be used to solve these asymptotic equations numerically. We then describe a proof-of-principle implementation of these methods for an electrostatic strong-flow gyrokinetic system; two basic test cases are presented to illustrate code functionality.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

Continuum electromagnetic gyrokinetic simulations of turbulence in the tokamak scrape-off layer and laboratory devices

Here, we present algorithms and results from Gkeyll, a full-f continuum, electromagnetic gyrokinetic code, designed to study turbulence in the edge region of fusion devices. The edge is computationally very challenging, requiring robust algorithms that can handle large-amplitude fluctuations and stable interactions with plasma sheaths. We present an energy-conserving high-order discontinuous Galerkin scheme that solves gyrokinetic equations in Hamiltonian form. Efficiency is improved by a careful choice of basis functions and automatically generated computation kernels. Previous verification tests were performed in the straight-field-line large plasma device [Shi et al., J. Plasma Phys. 83, 905830304 (2017)] and the Texas Helimak, a simple magnetized torus [Bernard et al., Phys. Plasmas 26, 042301 (2019)], including the effect of end-plate biasing on turbulence. Results for the scrape-off layer for NSTX parameters with a model helical magnetic geometry with bad curvature have been obtained [Shi et al., Phys. Plasmas 26, 012307 (2019)]. In this paper, we present algorithms for the two formulations of electromagnetic gyrokinetics: the Hamiltonian and the symplectic. We describe each formulation and show results of benchmark tests. Although our scheme works for the Hamiltonian formulation, the presence of spurious numerical modes for high-β and large $k^2_⊥ρ^2_s$ regimes shows that the symplectic formulation is more robust. We then review our recent algorithm for the symplectic formulation [Mandell et al., J. Plasma Phys. 86, 905860109 (2020)], along with example application of this new capability. Maintaining positivity of the distribution function can be challenging, and we describe a new and novel exponential recovery based algorithm to address this.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2022

Metriplectic foundations of gyrokinetic Vlasov–Maxwell–Landau theory

Here, this Letter reports on a metriplectic formulation of a collisional, nonlinear full-f electromagnetic gyrokinetic theory compliant with energy conservation and monotonic entropy production. In an axisymmetric background magnetic field, the toroidal angular momentum is also conserved. Notably, a new collisional current, contributing to the gyrokinetic Maxwell–Ampère equation and the gyrokinetic charge conservation law, is discovered.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2022

Global gyrokinetic study of shaping effects on electromagnetic modes at NSTX aspect ratio with ad hoc parallel magnetic perturbation effects

Plasma shaping may have a stronger effect on global turbulence in tight-aspect-ratio tokamaks than in conventional-aspect-ratio tokamaks due to the higher toroidicity and more acute poloidal asymmetry in the magnetic field. In addition, previous local gyrokinetic studies have shown that it is necessary to include parallel magnetic field perturbations in order to accurately compute growth rates of electromagnetic modes in tight-aspect-ratio tokamaks. In this work, the effects of elongation and triangularity on global, ion-scale, linear electromagnetic modes are studied at National Spherical Torus Experiment (NSTX) aspect ratio and high plasma β using the global gyrokinetic particle-in-cell code XGC. The effects of compressional magnetic perturbations are approximated via a well-known modification to the particle drifts that was developed for flux-tube simulations [Joiner et al., Phys. Plasmas 17, 072104 (2010)], without proof of its validity in a global simulation, with the gyrokinetic codes GENE and GEM being used for local verification and global cross-verification. Magnetic equilibria are re-constructed for each distinct plasma profile that is used. Coulomb collision effects are not considered. Within the limitations imposed by the present study, it is found that linear growth rates of electromagnetic modes (collisionless microtearing modes and kinetic ballooning modes) are significantly reduced in a high-elongation and high-triangularity NSTX-like geometry compared to a circular NSTX-like geometry. For example, growth rates of kinetic ballooning modes at high- β are reduced to the level of that of collisionless trapped electron modes.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2026

Validation of the GFS model for gyrokinetic stability of NSTX pedestal data

This study presents a large database validation of the gyro fluid system (GFS) model for linear gyrokinetic stability for high-mode (H-mode) edge transport barrier conditions in the national spherical torus experiment (NSTX) tokamak. The database of linear stability calculations with the CGYRO gyrokinetic code was produced using plasma profile measurements from NSTX discharges to identify kinetic ballooning modes (KBM), trapped electron modes (TEM), and micro-tearing modes (MTM) that limit the pressure profile gradient in the H-mode barrier. A novel Bayesian optimization approach determines optimal resolution parameters for GFS specifically for spherical tokamak pedestal conditions. Our results demonstrate that GFS, with optimized resolution, can achieve accurate linear stability analysis in NSTX pedestal conditions for reduced resolution compared to CGYRO. GFS can accurately find the KBM, TEM, and MTM instability branches. Parametric analysis reveals that GFS accuracy in this extreme pedestal parameter range is degraded for low magnetic shear and near the separatrix conditions. These findings establish GFS as a fast linear eigenmode solver for spherical tokamak pedestal gyrokinetic stability and demonstrate a systematic methodology for determining the optimum resolution settings.

Yang, Minglei [Oak Ridge National Laboratory (ORNL↗
DOE OSTI2022

Global gyrokinetic simulations of ASDEX Upgrade up to the transport timescale with GENE–Tango

An accurate description of turbulence up to the transport timescale is essential for predicting core plasma profiles and enabling reliable calculations for designing advanced scenarios and future devices. Here, we exploit the gap separation between turbulence and transport timescales and couple the global gyrokinetic code GENE to the transport-solver Tango, including kinetic electrons, collisions, realistic geometries, toroidal rotation and electromagnetic effects for the first time. This approach overcomes gyrokinetic codes' limitations and enables high-fidelity profile calculations in experimentally relevant plasma conditions, significantly reducing the computational cost. We present numerical results of GENE–Tango for two ASDEX Upgrade discharges, one of which exhibits a pronounced peaking of the ion temperature profile not reproduced by TGLF–ASTRA. We show that GENE–Tango can correctly capture the ion temperature peaking observed in the experiment. By retaining different physical effects in the GENE simulations, e.g., collisions, toroidal rotation and electromagnetic effects, we show that the ion temperature profile's peaking can be linked to electromagnetic effects of submarginal (stable) KBM modes. Furthermore, based on these results, the expected GENE–Tango speedup for the ITER standard scenario is larger than two orders of magnitude compared to a single gyrokinetic simulation up to the transport timescale, possibly making first-principles ITER simulations feasible on current computing resources.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2022

An E and B gyrokinetic simulation model for kinetic Alfvén waves in tokamak plasmas

The gyrokinetic particle simulation is a powerful tool for studies of transport, nonlinear phenomenon, and energetic particle physics in tokamak plasmas. While most gyrokinetic simulations make use of the scalar and vector potentials, a new model (GK-E&B) has been developed by using the E and B field in a general form and has been implemented in simulating kinetic Alfvén waves in uniform plasma. In our work, the Chen et al. GK-E&B model has been expressed, in general, tokamak geometry using the local orthogonal coordinates and general tokamak coordinates. Its reduction for uniform plasma is verified, and the numerical results show good agreement with the original work. The theoretical dispersion relation and numerical results in the local model in screw pinch geometry are also in excellent agreement. Numerical results show excellent performance in a realistic parameter regime of burning plasmas with high values of β/(M e k$^{2}_{⊥}$ρ$^{2}_{i}$), which is a challenge for traditional methods due to the “cancellation” problem. As one application, the GK-E&B model is implemented with kinetic electrons in the local single flux surface limit. With the matched International Tokamak Physics Activity-Toroidicity-induced Alfvén Eigenmodes parameters adopted, numerical results show the capability of the GK-E&B in treating the parallel electron Landau damping for realistic tokamak plasma parameters. As another application, the global GK-E&B model has been implemented with the dominant electron contribution in the cold electron limit. Its capability in simulating the finite E || due to the finite electron mass is demonstrated.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

Geometry dependence of the fluctuation intensity in gyrokinetic turbulence

The findings of an investigation into the properties of the three dimensional (3D) saturated fluctuation intensity of the electric potential in gyrokinetic turbulence simulations is presented. Scans in flux surface elongation and Shafranov shift are used to isolate the tokamak geometric dependencies. The potential intensity required in order to compute exact fluxes by a quasilinear method is determined using linear eigenmodes computed with the gyrokinetic code. A model of this non-linear intensity is constructed using the linear eigenmode properties and the geometry shape functions obtained from the 3D intensity spectrum. The model computes the poloidal wavenumber spectrum of the electron and ion energy fluxes with unprecedented accuracy. In conclusion, new insights are gained into the way zonal flow mixing saturates ion-scale turbulence by controlling the radial wavenumber width of the turbulence spectrum.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2022

Modelling of electrostatic ion-scale turbulence in divertor tokamaks with the gyrokinetic code $\mathrm{COGENT}$

Here, continuum gyrokinetic simulations of electrostatic ion scale turbulence are presented for the case of a diverted (single-null) tokamak geometry. The simulation model, implemented in the finite-volume code COGENT, solves the long-wavelength limit of the full-F gyrokinetic equation for ion species coupled to a vorticity equation for electrostatic potential variations, where a fluid model is used for an electron response. The model describes the ion scale ion temperature gradient (ITG) and resistive drift modes as well as neoclassical ion physics effects. Different turbulence regimes are observed depending on the plasma profiles, and the roles of a self-consistent background electric field and an X-point geometry are explored. In particular, increasing the pedestal density gradient and the corresponding radial electric field is demonstrated to suppress the ITG turbulence, whereas the same edge plasma background can still be destabilized by the resistive modes when the plasma resistivity is increased. The effects of X-point geometry are assessed by comparing cross-separatrix simulations with counterpart calculations performed for a toroidal annulus geometry. For the simulation parameters considered, similar global behaviour is observed in both cases, whereas strong local suppression of turbulence fluctuations is demonstrated near the X-point for the case of a single-null geometry.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2024

Development of an implicit electromagnetic capability for a hybrid gyrokinetic ion-fluid electron model

Here we report on the development and implementation of a hybrid kinetic ion–fluid electron model for electromagnetic COGENT simulations of edge plasmas. COGENT is a finite-volume gyrokinetic code that employs a locally field-aligned coordinate system combined with a mapped multi-block grid technology to handle strongly anisotropic edge plasma turbulence. The simulation model involves the long-wavelength limit of the ion gyrokinetic equation coupled to the vorticity and Ohm's law equations for the electromagnetic field perturbations. In order to handle the fast Alfvén wave time scales, an implicit-explicit time integration approach with a physics-based preconditioner is used. The model is successfully applied to the simulations of ion-scale resistive-drift ballooning turbulence in a toroidal annulus geometry. Substantial speed-up over a fully explicit time integration approach is observed.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2025

Global Gyrokinetic Simulations of Isotope Effects under Ambipolar Electric Fields and Advances Toward Whole-Volume Modeling

We review global gyrokinetic simulation studies on plasma transport in the Large Helical Device using XGC-S. XGC-S is an extended version of X-point Gyrokinetic Code for stellarators and has been progressively verified throughout the code development process. Verification tests of neoclassical transport successfully demonstrate the generation of an ambipolar electric field due to ripple-trapped particles. We perform quasi-linear analyses of the ion temperature gradient mode under the influence of the ambipolar electric field. The results reveal that the ambipolar electric field and the heavy hydrogen component in mixed isotope plasmas can lead to the favorable isotope effect observed in recent deuterium experiments. We also present recent efforts in code development toward whole-volume simulations, including the helical divertor region. A mesh generation scheme based on field-line tracing and the construction of curved surfaces perpendicular to the magnetic field would be promising for global field calculations in the whole-volume simulations.

Basic Plasma Phenomena and Gas Discharges↗
DOE OSTI2023

EUTERPE: A global gyrokinetic code for stellarator geometry

The current state of the EUTERPE code is described with emphasis on the implemented models and their numerical implementation. The code solves the multi-species electromagnetic gyrokinetic equations in the full volume of a three-dimensional domain. Noise reduction of the particle-in-cell method is achieved by using a δf-method and Fourier filters. The field equations are discretized with B-splines and the resulting system of equations is solved iteratively. For linear simulations a phase-factor transformation is applied in order to strongly reduce the necessary grid resolution. Apart from the full gyrokinetic model, other numerically less expensive hybrid models are also implemented. They are mainly tailored for comparison with fluid theory and for studying the interaction of the bulk plasma with fast particles. The code is parallelized for CPUs by particle and domain decomposition. Good scalability up to several thousand nodes is demonstrated.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2020

First implementation of gyrokinetic exact linearized Landau collision operator and comparison with models

Gyrokinetic simulations are fundamental to understanding and predicting turbulent transport in magnetically confined fusion plasmas. Previous simulations have used model collision operators with approximate field-particle terms of unknown accuracy and/or have neglected collisional finite Larmor radius (FLR) effects. We have implemented the linearized Fokker–Planck collision operator with exact field-particle terms and full FLR effects in a gyrokinetic code (GENE). The new operator, referred to as “exact” in this paper, allows the accuracy of model collision operators to be assessed. The conservative Landau form is implemented because its symmetry underlies the conservation laws and the H-theorem, and enables numerical methods to preserve this conservation, independent of resolution. The implementation utilizes the finite-volume method recently employed to discretize the Sugama collision model in GENE, allowing direct comparison between the two operators. Results show that the Sugama model appears accurate for the growth rates of trapped electron modes (TEMs) driven only by density gradients, but appreciably underestimates the growth rates as the collisionality and electron temperature gradient increase. The TEM turbulent fluxes near the nonlinear threshold using the exact operator are similar to the Sugama model for the n e = d ln T e /d ln n e = 0 case, but substantially larger than the Sugama model for the n e = 1 case. The FLR effects reduce the growth rates increasingly with wavenumber deepening a “valley” at the intermediate binormal wavenumber as the unstable mode extends from the TEM regime to the electron temperature gradient instability regime. Application to the Hinton–Rosenbluth problem shows that zonal flows decay faster as the radial wavenumber increases and the exact operator yields weaker decay rates.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗
DOE OSTI2020

Verification of local electrostatic gyrokinetic simulation of driftwave instability in field-reversed configuration

Local linear simulations of ion temperature gradient (ITG) instabilities using a gyrokinetic particle code GKD1D have been verified by comparing with the analytic dispersion relation in the slab geometry and by benchmarking with a global gyrokinetic code GTC-X in a realistic field-reversed configuration (FRC). Results of ITG simulations using either adiabatic or kinetic electrons exhibit excellent agreements between the two codes for linear frequencies, growth rates, and mode structures. The ITG modes in the FRC scrape-off layer region are mostly dominated by the poloidal m = 1 harmonic. Kinetic electrons enhance the subdominant m = 2 harmonic and the even parity dominates the ITG mode structure. Kinetic electrons increase the growth rates for the low-n modes, but decrease the growth rates for the high-n modes.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗
DOE OSTI2021

Spatial coupling of gyrokinetic simulations, a generalized scheme based on first-principles

In this paper, we present a scheme that spatially couples two gyrokinetic codes using first-principles. Coupled equations are presented and a necessary and sufficient condition for ensuring accuracy is derived. This new scheme couples both the field and the particle distribution function. The coupling of the distribution function is only performed once every few time-steps, using a five-dimensional (5D) grid to communicate the distribution function between the two codes. This 5D grid interface enables the coupling of different types of codes and models, such as particle and continuum codes, or delta-f and total-f models. Transferring information from the 5D grid to the marker particle weights is achieved using a new resampling technique. Demonstration of the coupling scheme is shown using two XGC gyrokinetic simulations for both the core and edge. We also apply the coupling scheme to two continuum simulations for a one-dimensional advection–diffusion problem.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗