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Hierarchical Model for Bayesian Hypothesis Testing

A common problem in data analysis is testing a point hypothesis. For example, one might test whether or not the mean of a distribution is zero. We describe the standard Bayesian approach, which requires the choice of a width parameter to define a prior distribution for an alternative hypothesis. Standard practice is to choose this width parameter to be the least favorable choice for the original, point hypothesis. This approach, however, is ad-hoc and not informed by the data. We examine this practice in more detail than in previous work by constructing a hierarchical model, where the width parameter is an unknown value subject to inference. This yields a marginal posterior distribution for the width parameter. We then show that using the median of this marginal posterior distribution as the width parameter in the Bayesian comparison between the hypotheses gives results which are very similar to those obtained from the existing approaches. This gives a more rigorous and data-informed justification for the standard practice of choosing a width parameter which is least favorable to the point hypothesis.

97 MATHEMATICS AND COMPUTING↗

Failure of Taylor's hypothesis in the atmospheric surface layer and its correction for eddy-covariance measurements

Taylors’ frozen turbulence hypothesis suggests that all turbulent eddies are advected by the mean streamwise velocity, without changes in their properties. This hypothesis has been widely invoked to compute Reynolds’ averaging using temporal turbulence data measured at a single point in space. However, in the atmospheric surface layer, the exact relationship between convection velocity and wavenumber k has not been fully revealed since previous observations were limited by either their spatial resolution or by the sampling length. Using Distributed Temperature Sensing (DTS), acquiring turbulent temperature fluctuations at high temporal and spatial frequencies, we computed convection velocities across wavenumbers using a phase spectrum method. We found that convection velocity decreases as k –1/3 at the higher wavenumbers of the inertial subrange instead of being independent of wavenumber as suggested by Taylor's hypothesis. We further corroborated this result using large eddy simulations. Applying Taylor's hypothesis thus systematically underestimates turbulent spectrum in the inertial subrange. As a result, a correction is proposed for point-based eddy-covariance measurements, which can improve surface energy budget closure and estimates of CO 2 fluxes.

54 ENVIRONMENTAL SCIENCES↗

The channel-source hypothesis: Empirical evidence for in-channel sourcing of dissolved organic carbon to explain hysteresis in a headwater mountain stream

Catchment hydrologists have long puzzled over the question: How can catchments rapidly generate storm flows and pulses of solutes in response to storm events? Conceptual models viewing catchments as composed of discrete source areas generating flow at unique time scales and with unique chemical characteristics have been used to explain the observed changes in flow and water chemistry. Surprisingly, those conceptual models usually do not treat the stream channel as one of the potential source areas. We propose the channel-source hypothesis in which the stream itself should be considered as a potential source with the same rigour as other contributing areas. We pose this in the spirit of the scientific use of the word: a hypothesis is not a proven idea but rather a provisional supposition serving as the basis for further study. We suggest that the channel should be considered as a potential source for dissolved organic carbon (DOC). Channels store substantial amounts of organic matter, and stream ecologists have long studied stream carbon cycling. From those studies, we know that leaching and decomposition can generate DOC from particulate organic carbon (POC). Further, POC is stored in channel ‘dead-zones’—regions of low flow velocity - that can be activated as flow velocity increases, thus releasing accumulated DOC during storms. All catchments are different; there is no reason to assume that channel sources are always important, in every catchment, in every storm. Thus, the channel-source hypothesis does not replace existing conceptual models. Instead, it adds another potential mechanism that may explain DOC dynamics observed in streams. The channel-source hypothesis has substantial implications for catchment studies examining sources of DOC in stream water or using DOC as a tracer to determine the locations of, and proportional contributions of, different source areas for streamflow generation.

54 ENVIRONMENTAL SCIENCES↗

A latitude-dependent analysis of the leptonic hypothesis for the Fermi Bubbles

The Fermi Bubbles are giant Galactic structures observed in both gamma-rays and microwaves. Recent studies have found support for the hypothesis that the gamma-ray and microwave emission can both be understood as arising from a hard cosmic ray electron population within the volume of the Bubbles, via inverse Compton scattering and synchrotron radiation, respectively. The relative rates of these processes are set by the relative energy density of the interstellar radiation field and the magnetic field within the Bubbles; consequently, under the hypothesis of a common origin, the combination of the gamma-ray and microwave measurements can be used to estimate the magnetic field within the Bubbles. We revisit the consistency of this hypothesis on a latitude-by-latitude basis, using data from Fermi, WMAP and Planck; estimate the variation of the electron spectrum within the Bubbles; and infer bounds on the magnetic field within the Bubbles as a function of distance from the Galactic plane. We find that while the microwave and gamma-ray spectra are generally consistent with the leptonic hypothesis for few-microGauss magnetic fields, there appears to be a preference for spectral hardening in the microwaves at mid-latitudes (especially in the $|b|$ ~ 25°–35° range) that is not mirrored in the gamma-rays. This result may hint at a non-leptonic contribution to the gamma-ray spectra; however, the discrepancy can be reconciled in purely leptonic models if the cut-off energy for the electrons is lower in this latitude range and the spectrum below the cut-off is harder.

79 ASTRONOMY AND ASTROPHYSICS↗

Modified Brink-Axel hypothesis for astrophysical Gamow-Teller transitions

Weak interaction charged current transition strengths from highly excited nuclear states are fundamental ingredients for accurate modeling of compact object composition and dynamics, but are difficult to obtain either from experiment or theory. For lack of alternatives, calculations have often fallen back upon a generalized Brink-Axel hypothesis, that is, assuming the strength function (transition probability) is independent of the initial nuclear state but depends only upon the transition energy and the weak interaction properties of the parent nucleus ground state. Here we present numerical evidence for a modified “local” Brink-Axel hypothesis for Gamow-Teller transitions for pf-shell nuclei relevant to astrophysical applications. Specifically, while the original Brink-Axel hypothesis does not hold globally, strength functions from initial states nearby in energy are similar within statistical fluctuations. This agrees with previous work on strength function moments. Using this modified hypothesis, we can tackle strength functions at previously intractable initial energies, using semiconverged initial states at arbitrary excitation energy. Our work provides a well-founded method for computing accurate thermal weak transition rates for medium-mass nuclei at temperatures occurring in stellar cores near collapse. We finish by comparing results to previous calculations of astrophysical rates.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

The QT interval in lightning injury with implications for the cessation of metabolism hypothesis

An hypothesis is presented to provide an alternative to the Cessation of Metabolism hypothesis often invoked in lightning injury. Cessation of Metabolism has been proposed to explain the observation of good recovery after a prolonged period in cardiac arrest in some lightning injured patients. Reevaluation of EEGs from lightning injured patients show a high incidence of QT prolongation. Reexamination of the cases used to support Cessation of Metabolism also reveals little evidence to justify the hypothesis. The finding of QT prolongation coupled with the hyperadrenergic state said to exist in lightning injury, may promote a state of episodic induction of and recovery from Torsade de Pointes Ventricular Tachycardia (VT). Histological examination of the myocardium supports the new hypothesis. This the first concerted description of lightning injury as one of the general causes of QT prolongation. It appears to occur frequently after lightning injury, is a prerequisite of and predisposes to episodes of Torsade de Pointes VT. These electrocardiographic abnormalities explain Cessation of Metabolism and recognition may change management and lead to greater survival.

Andrews, Christopher J.↗

Comments on "The "Elevated Heat Pump" Hypothesis for the Aerosol-Monsoon Hydroclimate Link: "Grounded" in Observations?" by S. Nigam and M. Bollasina

In their recent paper Nigam and Bollasina [2010, hereafter NB] claimed to have found observational evidences that are at variance with the Elevated Heat Pump (EHP) hypothesis regarding the possible impacts of absorbing aerosols on the South Asian summer monsoon [Lau et al., 2006; Lau and Km 2006). We found NB's arguments and inferences against the EHP hypothesis flawed, stemming from a lack of understanding and an out-of-context interpretation of the hypothesis. It was argued that the simultaneous negative correlation of aerosol with rainfall, and correlations with other quantities in May as evidences against the EHP hypothesis. They cannot be more wrong in that argument. First, Lau and Kim [2006, hereafter, LKO6] never stated that the main rainfall response to EHP is in May. Second, the EHP is about responses of the entire Indian monsoon system that are non-local in space and time with respect to the aerosol forcing. Third, the correlation maps shown in NB, including the increased convection over the Bay of Bengal is not the response to EHP but rather represents the large-scale circulation that provides the build-up of the aerosols, before the onset of the monsoon rainfall over India. Because aerosol can only accumulate where there is little or no wash-out by rain, the negative correlation is a necessary condition for increased atmospheric loading of aerosols.

Lau, K. M.↗

Comment on "'Elevated Heat Pump' Hypothesis for the Aerosol-Monsoon Hydroclimate Link: 'Grounded' in Observations?" by S. Nigam and M. Bollasina

In their recent paper, Nigam and Bollasina [2010] (hereinafter NB) claimed to have found observational evidences that are at variance with the elevated heat pump (EHP) hypothesis regarding the possible impacts of absorbing aerosols on the South Asian summer monsoon [Lau et al., 2006; Lau and Kim, 2006]. We found NB's arguments and inferences against the EHP hypothesis flawed, stemming from their own out of context interpretation of the hypothesis. NB argued that the simultaneous negative correlation of aerosol with rainfall, and correlations with other quantities in May, are evidence against the EHP hypothesis. Their argument cannot be justified. First, Lau and Kim [2006] (hereinafter LK06) never stated that the main rainfall response to EHP is in May. Second, the EHP is about responses of the entire Indian monsoon system that are nonlocal in space and time with respect to the aerosol forcing. As shown in Figure 4 of LK06, while the aerosol anomalies are strongest in April-May, the strongest rainfall response is in June-July, with the enhanced rainfall fed by an induced thermally driven circulation which brings additional moisture from the ocean to the Indian subcontinent. Third, the increased rainfall over the Bay of Bengal as shown in Figure 1a of NB and the increased low-level convergence in Figure 1f of NB do not necessarily reflect responses associated with EHP but rather the large ]scale circulation that provides the buildup of the aerosols before the onset of the monsoon rainfall over India. Because aerosol can only accumulate where there is little or no washout by rain, the negative correlation is a necessary condition for increased atmospheric loading of aerosols. For the same reason, the spatial distributions of rainfall and aerosol generally are offset with each other, i.e., high aerosol in regions of low rainfall. This is evident in Figure 1, which shows the climatological mean of the MODIS aerosol optical depth (AOD), and TRMM rainfall over India in May. The maximum AOD is found over the Indo-Gangetic Plain and the desert regions of northwest India and Pakistan

Lau, K. M.↗

Cell migration or cytokinesis and proliferation? – Revisiting the “go or grow” hypothesis in cancer cells in vitro

The mortality of patients with solid tumors is mostly due to metastasis that relies on the interplay between migration and proliferation. The “go or grow” hypothesis postulates that migration and proliferation spatiotemporally excludes each other. We evaluated this hypothesis on 35 cell lines (12 mesothelioma, 13 melanoma and 10 lung cancer) on both the individual cell and population levels. Following three-day-long videomicroscopy, migration, proliferation and cytokinesis-length were quantified. We found a significantly higher migration in mesothelioma cells compared to melanoma and lung cancer while tumor types did not differ in mean proliferation or duration of cytokinesis. Strikingly, we found in melanoma and lung cancer a significant positive correlation between mean proliferation and migration. Furthermore, non-dividing melanoma and lung cancer cells displayed slower migration. In contrast, in mesothelioma there were no such correlations. Interestingly, negative correlation was found between cytokinesis-length and migration in melanoma. FAK activation was higher in melanoma cells with high motility. We demonstrate that the cancer cells studied do not defer proliferation for migration. Of note, tumor cells from various organ systems may differently regulate migration and proliferation. Furthermore, our data is in line with the observation of pathologists that highly proliferative tumors are often highly invasive. - Highlights: • We investigated the “go or grow” hypothesis in human cancer cells in vitro. • Proliferation and migration positively correlate in melanoma and lung cancer cells. • Duration of cytokinesis and migration shows inverse correlation. • Increased FAK activation is present in highly motile melanoma cells.

60 APPLIED LIFE SCIENCES↗

Improving the space surveillance telescope's performance using multi-hypothesis testing

The Space Surveillance Telescope (SST) is a Defense Advanced Research Projects Agency program designed to detect objects in space like near Earth asteroids and space debris in the geosynchronous Earth orbit (GEO) belt. Binary hypothesis test (BHT) methods have historically been used to facilitate the detection of new objects in space. In this paper a multi-hypothesis detection strategy is introduced to improve the detection performance of SST. In this context, the multi-hypothesis testing (MHT) determines if an unresolvable point source is in either the center, a corner, or a side of a pixel in contrast to BHT, which only tests whether an object is in the pixel or not. The images recorded by SST are undersampled such as to cause aliasing, which degrades the performance of traditional detection schemes. The equations for the MHT are derived in terms of signal-to-noise ratio (S/N), which is computed by subtracting the background light level around the pixel being tested and dividing by the standard deviation of the noise. A new method for determining the local noise statistics that rejects outliers is introduced in combination with the MHT. An experiment using observations of a known GEO satellite are used to demonstrate the improved detection performance of the new algorithm over algorithms previously reported in the literature. The results show a significant improvement in the probability of detection by as much as 50% over existing algorithms. In addition to detection, the S/N results prove to be linearly related to the least-squares estimates of point source irradiance, thus improving photometric accuracy.

79 ASTRONOMY AND ASTROPHYSICS↗

Hypothesis tests for the detection of constant speed radiation moving sources

Radiation Portal Monitors are deployed in linear network to detect radiological material in motion. As a complement to single and multichannel detection algorithms, inefficient under too low signal to noise ratios, temporal correlation algorithms have been introduced. Test hypothesis methods based on empirically estimated mean and variance of the signals delivered by the different channels have shown significant gain in terms of a tradeoff between detection sensitivity and false alarm probability. This paper discloses the concept of a new hypothesis test for temporal correlation detection methods, taking advantage of the Poisson nature of the registered counting signals, and establishes a benchmark between this test and its empirical counterpart. The simulation study validates that in the four relevant configurations of a pedestrian source carrier under respectively high and low count rate radioactive background, and a vehicle source carrier under the same respectively high and low count rate radioactive background, the newly introduced hypothesis test ensures a significantly improved compromise between sensitivity and false alarm, while guaranteeing the stability of its optimization parameter regardless of signal to noise ratio variations between 2 to 0.8. (authors)

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Multi‐hypothesis comparison of Farquhar and Collatz photosynthesis models reveals the unexpected influence of empirical assumptions at leaf and global scales

Abstract Mechanistic photosynthesis models are at the heart of terrestrial biosphere models (TBMs) simulating the daily, monthly, annual and decadal rhythms of carbon assimilation ( A ). These models are founded on robust mathematical hypotheses that describe how A responds to changes in light and atmospheric CO 2 concentration. Two predominant photosynthesis models are in common usage: Farquhar (FvCB) and Collatz (CBGB). However, a detailed quantitative comparison of these two models has never been undertaken. In this study, we unify the FvCB and CBGB models to a common parameter set and use novel multi‐hypothesis methods (that account for both hypothesis and parameter variability) for process‐level sensitivity analysis. These models represent three key biological processes: carboxylation, electron transport, triose phosphate use (TPU) and an additional model process: limiting‐rate selection. Each of the four processes comprises 1–3 alternative hypotheses giving 12 possible individual models with a total of 14 parameters. To broaden inference, TBM simulations were run and novel, high‐resolution photosynthesis measurements were made. We show that parameters associated with carboxylation are the most influential parameters but also reveal the surprising and marked dominance of the limiting‐rate selection process (accounting for 57% of the variation in A vs. 22% for carboxylation). The limiting‐rate selection assumption proposed by CBGB smooths the transition between limiting rates and always reduces A below the minimum of all potentially limiting rates, by up to 25%, effectively imposing a fourth limitation on A . Evaluation of the CBGB smoothing function in three TBMs demonstrated a reduction in global A by 4%–10%, equivalent to 50%–160% of current annual fossil fuel emissions. This analysis reveals a surprising and previously unquantified influence of a process that has been integral to many TBMs for decades, highlighting the value of multi‐hypothesis methods.

54 ENVIRONMENTAL SCIENCES↗

Toward Joint Hypothesis-Tests Seismic Event Screening Analysis: Ms|mb and Event Depth

Well established theory can be used to combine single-phenomenology hypothesis tests into a multi-phenomenology event screening hypothesis test (Fisher's and Tippett's tests). Commonly used standard error in Ms:mb event screening hypothesis test is not fully consistent with physical basis. Improved standard error - Better agreement with physical basis, and correctly partitions error to include Model Error as a component of variance, correctly reduces station noise variance through network averaging. For 2009 DPRK test - Commonly used standard error 'rejects' H0 even with better scaling slope ({beta} = 1, Selby et al.), improved standard error 'fails to rejects' H0.

58 GEOSCIENCES↗

Revisiting streamside trees that do not use stream water: can the two water worlds hypothesis and snowpack isotopic effects explain a missing water source?: Riparian tree water sources

We revisit a classic ecohydrological study that showed streamside riparian trees in a semiarid mountain catchment did not use perennial stream water. The original study suggested that mature individuals of Acer negundo, Acer grandidentatum, and other species were dependent on water from “deeper strata,” possibly groundwater. We used a dual stable isotope approach (δ 18 O and δ 2 H) to further examine the water sources of these trees. We tested the hypothesis that groundwater was the main tree water source, but found that neither groundwater nor stream water matched the isotope composition of xylem water during two growing seasons. Soil water (0–1 m depth) was closest to and periodically overlapped with xylem water isotope composition, but overall, xylem water was isotopically enriched compared to all measured water sources. The “two water worlds” hypothesis postulates that soil water comprises isotopically distinct mobile and less mobile pools that do not mix, potentially explaining this disparity. We further hypothesized that isotopic effects during snowpack metamorphosis impart a distinct isotope signature to the less mobile soil water that supplies summer transpiration. Depth trends in water isotopes following snowmelt were consistent with the two water worlds hypothesis, but snow metamorphic isotope effects could not explain the highly enriched xylem water. Thus, the dual isotope approach did not unambiguously determine the water source(s) of these riparian trees. Further exploration of physical, geochemical, and biological mechanisms of water isotope fractionation and partitioning is necessary to resolve these data, highlighting critical challenges in the isotopic determination of plant water sources.

54 ENVIRONMENTAL SCIENCES↗

Statistical significance of the sterile-neutrino hypothesis in the context of reactor and gallium data

We evaluate the statistical significance of the 3+1 sterile-neutrino hypothesis using $v_e$ and $\bar{v}_e$ disappearance data from reactor, solar and gallium radioactive source experiments. Concerning the latter, we investigate the implications of the recent BEST results. For reactor data we focus on relative measurements independent of flux predictions. For the problem at hand, the usual χ 2 -approximation to hypothesis testing based on Wilks’ theorem has been shown in the literature to be inaccurate. We therefore present results based on Monte Carlo simulations, and find that this typically reduces the significance by roughly 1σ with respect to the naïve expectation. We find no significant indication in favor of sterile-neutrino oscillations from reactor data. On the other hand, gallium data (dominated by the BEST result) show more than 5σ of evidence supporting the sterile-neutrino hypothesis, favoring oscillation parameters in agreement with constraints from reactor data. This explanation is, however, in significant tension (~3 σ) with solar neutrino experiments. In order to assess the robustness of the signal for gallium experiments we present a discussion of the impact of cross-section uncertainties on the results.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Generalized logarithmic scaling for high-order moments of the longitudinal velocity component explained by the random sweeping decorrelation hypothesis

Expressions for the logarithmic variations of the normalized turbulent longitudinal velocity ($\overline{u^2p}^+$)1/p with normalized distance z/δ from a boundary for high-order (p) moments in the intermediate region of wall bounded flows characterized by thickness δ are derived. The ansatz that ($\overline{u^2p}^+$)1/p variation in ln(z/δ) originates from a compound effect of random sweeping and -1 power-law scaling in the longitudinal velocity spectrum E u (k) is discussed, where k is the wavenumber. Using velocity time series sampled above a uniform ice sheet, an E u (k) ~ k-1 scaling is confirmed for kz < 1 and kδ > 1. The data were then used to analyze assumptions required for the utility of the random sweeping decorrelation (RSD) hypothesis connecting the k-1 power-law with log-scaling in ($\overline{u^2p}^+$)1/p. It has been found out that while the RSD hypothesis is operationally applicable to scales associated with attached eddies bounded by kz < 1 and kδ > 1, significant interactions among high-order turbulent velocity and velocity increments lead to the conclusion that the RSD hypothesis cannot be exactly valid. Lastly, its operational utility stems from the observations that some of the interaction terms among the high-order velocity and velocity increments act in opposite directions thereby canceling their additive effects in RSD.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

TESTING THE HYPOTHESIS THAT METHANOL MASER RINGS TRACE CIRCUMSTELLAR DISKS: HIGH-RESOLUTION NEAR-INFRARED AND MID-INFRARED IMAGING

Milliarcsecond very long baseline interferometry maps of regions containing 6.7 GHz methanol maser emission have lead to the recent discovery of ring-like distributions of maser spots and the plausible hypothesis that they may be tracing circumstellar disks around forming high-mass stars. We aimed to test this hypothesis by imaging these regions in the near- and mid-infrared at high spatial resolution and compare the observed emission to the expected infrared morphologies as inferred from the geometries of the maser rings. In the near-infrared we used the Gemini North adaptive optics system of ALTAIR/NIRI, while in the mid-infrared we used the combination of the Gemini South instrument T-ReCS and super-resolution techniques. Resultant images had a resolution of {approx}150 mas in both the near-infrared and mid-infrared. We discuss the expected distribution of circumstellar material around young and massive accreting (proto)stars and what infrared emission geometries would be expected for the different maser ring orientations under the assumption that the masers are coming from within circumstellar disks. Based upon the observed infrared emission geometries for the four targets in our sample and the results of spectral energy distribution modeling of the massive young stellar objects associated with the maser rings, we do not find compelling evidence in support of the hypothesis that methanol masers rings reside in circumstellar disks.

79 ASTRONOMY AND ASTROPHYSICS↗

THE VIOLATION OF THE TAYLOR HYPOTHESIS IN MEASUREMENTS OF SOLAR WIND TURBULENCE

Motivated by the upcoming Solar Orbiter and Solar Probe Plus missions, qualitative and quantitative predictions are made for the effects of the violation of the Taylor hypothesis on the magnetic energy frequency spectrum measured in the near-Sun environment. The synthetic spacecraft data method is used to predict observational signatures of the violation for critically balanced Alfvénic turbulence or parallel fast/whistler turbulence. The violation of the Taylor hypothesis can occur in the slow flow regime, leading to a shift of the entire spectrum to higher frequencies, or in the dispersive regime, in which the dissipation range spectrum flattens at high frequencies. It is found that Alfvénic turbulence will not significantly violate the Taylor hypothesis, but whistler turbulence will. The flattening of the frequency spectrum is therefore a key observational signature for fast/whistler turbulence.

79 ASTRONOMY AND ASTROPHYSICS↗