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At least 37 records · Page 2

NASA's Biomass Production Chamber: a testbed for bioregenerative life support studies

The Biomass Production Chamber (BPC) located at Kennedy Space Center, FL, USA provides a large (20 m2 area, 113 m3 vol.), closed environment for crop growth tests for NASA's Controlled Ecological Life Support System (CELSS) program. Since the summer of 1988, the chamber has operated on a near-continuous basis (over 1200 days) without any major failures (excluding temporary power losses). During this time, five crops of wheat (64-86 days each), three crops of soybean (90 to 97 days), five crops of lettuce (28-30 days), and four crops of potato (90 to 105 days were grown, producing 481 kg of dry plant biomass, 196 kg edible biomass, 540 kg of oxygen, 94,700 kg of condensed water, and fixing 739 kg of carbon dioxide. Results indicate that total biomass yields were close to expected values for the given light input, but edible biomass yields and harvest indices were slightly lower than expected. Stand photosynthesis, respiration, transpiration, and nutrient uptake rates were monitored throughout growth and development of the different crops, along with the build-up of ethylene and other volatile organic compounds in the atmosphere. Data were also gathered on system hardware maintenance and repair, as well as person-hours required for chamber operation. Future tests will include long-term crop production studies, tests in which nutrients from waste treatment systems will be used to grow new crops, and multi-species tests.

NASA Center KSC↗

The Northeast Monsoon's Impact on Mixing, Phytoplankton Biomass and Nutrient Cycling in the Arabian Sea

In the northern Arabian Sea, atmospheric conditions during the Northeast (winter) Monsoon lead to deep convective mixing. Due to the proximity of the permanent pyncnocline to the sea surface, this mixing does not penetrate below 125 m. However, a strong nitracline is also present and the deep convection results in significant nitrate flux into the surface waters. This leads to nitrate concentrations over the upper 100 m that exceed 4 micrometers toward the end of the Monsoon. During the 1994/1995 US JGOFS/Arabian Sea expedition, the mean areal gross primary production over two successive Northeast Monsoons was determined to be 1.35gC/sq m/d. Thus, despite the deep penetrative convection, high rates of primary productivity were maintained. An interdisciplinary model was developed to elucidate the biogeochemical processes involved in supporting the elevated productivity. This model consists of a 1-D mixed-layer model coupled to a set of equations that tracked phytoplankton growth and the concentration of the two major nutrients (nitrate and ammonium). Zooplankton grazing was parameterized by rate constant determined by shipboard experiments. Model boundary conditions consist of meteorological time-series measured from the surface buoy that was part of the ONR Arabian Sea Experiment's central mooring. Our numerical experiments show that elevated surface evaporation, and the associated salinization of the mixed layer, strongly contributes to the frequency and penetration depth of the observed convective mixing. Cooler surface temperatures, increased nitrate entrainment, reduced water column stratification, and lower near-surface chlorophyll a concentrations all result from this enhanced mixing. The model also captured a dependence on regenerated nitrogen observed in nutrient uptake experiments performed during the Northeast Monsoon. Our numerical experiments also indicate that variability in mean pycnocline depth causes up to a 25% reduction in areal chlorophyll a concentration. We hypothesize that such shifts in pycnocline depth may contribute to the interannual variations in primary production and surface chlorophyll a concentration that have been previously observed in this region.

Wiggert, J. D.↗

Amino acids as a source of organic nitrogen in Antarctic endolithic microbial communities

In the Antarctic Dry Valleys, cryptoendolithic microbial communities occur within porous sandstone rocks. Current understanding of the mechanisms of physiological adaptation of these communities to the harsh Antarctic environment is limited, because traditional methods of studying microbial physiology are very difficult to apply to organisms with extremely low levels of metabolic activity. In order to fully understand carbon and nitrogen cycling and nutrient uptake in cryptoendolithic communities, and the metabolic costs that the organisms incur in order to survive, it is necessary to employ molecular geochemical techniques such as amino acid analysis in addition to physiological methods.

Antarctica↗

Comparison of Two Bioinformatics Tools Used to Characterize the Microbial Diversity and Predictive Functional Attributes of Microbial Mats from Lake Obersee, Antarctica

In this study, using NextGen sequencing of the collective 16S rRNA genes obtained from two sets of samples collected from Lake Obersee, Antarctica, we compared and contrasted two bioinformatics tools, PICRUSt and Tax4Fun. We then developed an R script to assess the taxonomic and predictive functional profiles of the microbial communities within the samples. Taxa such as Pseudoxanthomonas, Planctomycetaceae, Cyanobacteria Subsection III, Nitrosomonadaceae, Leptothrix, and Rhodobacter were exclusively identified by Tax4Fun that uses SILVA database; whereas PICRUSt that uses Greengenes database uniquely identified Pirellulaceae, Gemmatimonadetes A1-B1, Pseudanabaena, Salinibacterium and Sinibacteraceae. Predictive functional profiling of the microbial communities using Tax4Fun and PICRUSt separately revealed common metabolic capabilities, while also showing specific functional IDs not shared between the two approaches. Combining these functional predictions using a customized R script revealed a more inclusive metabolic profile, such as hydrolases, oxidoreductases, transferases; enzymes involved in carbohydrate and amino acid metabolisms; and membrane transport proteins known for nutrient uptake from the surrounding environment. Our results present the first molecular-phylogenetic characterization and predictive functional profiles of the microbial mat communities in Lake Obersee, while demonstrating the efficacy of combining both the taxonomic assignment information and functional IDs using the R script created in this study for a more streamlined evaluation of predictive functional profiles of microbial communities.

Hyunmin Koo↗

Nutrient management effects on sweetpotato genotypes under controlled environment

Sweetpotato is one of several crops recommended by National Aeronautics and Space Administration (NASA) for bioregenerative life support studies. One of the objectives of the Tuskegee University NASA Center is to optimize growth conditions for adaptability of sweetpotatoes for closed bioregenerative systems. The role of nutrient solution management as it impacts yield has been one of the major thrusts in these studies. Nutrient solution management protocol currently used consists of a modified half Hoagland solution that is changed at 14-day intervals. Reservoirs are refilled with deionized water if the volume of the nutrient solution was reduced to 8 liters or less before the time of solution change. There is the need to recycle and replenish nutrient solution during crop growth, rather than discard at 14 day intervals as previously done, in order to reduce waste. Experiments were conducted in an environmental growth room to examine the effects of container size on the growth of several sweetpotato genotypes grown under a nutrient replenishment protocol. Plants were grown from vine cuttings of 15cm length and were planted in 0.15 x 0.15 x 1.2m growth channels using a closed nutrient film technique system. Nutrient was supplied in a modified half strength Hoagland's solution with a 1:2.4 N:K ratio. Nutrient replenishment protocol consisted of daily water replenishment to a constant volume of 30.4 liters in the small containers and 273.6 liters in the large container. Nutrients were replenished as needed when the EC of the nutrient solution fell below 1200 mhos/cm. The experimental design used was a split-plot with the main plot being container size and genotypes as the subplot. Nine sweetpotato genotypes were evaluated. Results showed no effect of nutrient solution container size on storage root yield, foliage fresh and dry mass, leaf area or vine length. However, plants grown using the large nutrient solution container accumulated more storage root dry mass than those with the small containers. Although plants grown with the smaller containers showed greater water uptake, plant nutrient uptake was lower than with the larger container. All genotypes evaluated showed variation in their responses to all parameters measured.

Solanaceae/genetics/growth & development↗

A Data Base of Nutrient Use, Water Use, CO2 Exchange, and Ethylene Production by Soybeans in a Controlled Environment

A data set is given describing daily nutrient and water uptake, carbon dioxide (CO2) exchange, ethylene production, and carbon and nutrient partitioning from a 20 sq m stand of soybeans (Glycine max (L.) Merr. cv. McCall] for use in bioregenerative life support systems. Stand CO2 exchange rates were determined from nocturnal increases in CO2 (respiration) and morning drawdowns (net photosynthesis) to a set point of 1000 micromol/ mol each day (i.e., a closed system approach). Atmospheric samples were analyzed throughout growth for ethylene using gas chromatography with photoionization detection (GC/PH)). Water use was monitored by condensate production from the humidity control system, as well as water uptake from the nutrient solution reservoirs each day. Nutrient uptake data were determined from daily additions of stock solution and acid to maintain an EC of 0.12 S/m and pH of 5.8. Dry mass yields of seeds, pods (without seeds), leaves, stems, and roots are provided, as well as elemental and proximate nutritional compositions of the tissues. A methods section is included to qualify any assumptions that might be required for the use of the data in plant growth models, along with a daily event calendar documenting set point adjustments and the occasional equipment or sensor failure.

Wheeler, R. M.↗

Calcification and photosynthesis of the coral acropora cervicornis under calcium limited conditions

Differing hypothesis about the function of calcification are based on an interesting dilemma. Is the purpose of calcification mainly a structural and protective one or does calcification serve other functions? Does photosynthesis increase carbonate ion activity and cause calcification or does calcification increase CO2 levels and stimulate photsynthesis? It is proposed that calcification in corals is not dependent upon photosynthesis but upon calcium levels in the water. Under normal ocean conditions, corals convert a certain percentage of energy to photosynthesis and respiration and another percentage to calcification. As corals become nutrient stressed, particularly calcium limited, the ratio of photosynthesis to calcification shifts towards calcification in order to generate protons. The protons generated during calcification may stimulate photosynthesis and aid in the uptake of nutrients and biocarbonates. The results of the calcification experiment show a trend towards increased calcification and decreased photosynthesis when the coral Acropora cervicornis is calcium limited, but the data are inconclusive and further research is needed.

Rathfon, Megan↗

The uptake of NO3-, NO2-, and NH4+ by intact wheat (Triticum aestivum) seedlings. I. Induction and kinetics of transport systems

The inducibility and kinetics of the NO3-, NO2-, and NH4+ transporters in roots of wheat seedlings (Triticum aestivum cv Yercora Rojo) were characterized using precise methods approaching constant analysis of the substrate solutions. A microcomputer-controlled automated high performance liquid chromatography system was used to determine the depletion of each N species (initially at 1 millimolar) from complete nutrient solutions. Uptake rate analyses were performed using computerized curve-fitting techniques. More precise estimates were obtained for the time required for the extent of the induction of each transporter. Up to 10 and 6 hours, respectively, were required to achieve apparent full induction of the NO3- and NO2- transporters. Evidence for substrate inducibility of the NH4+ transporters requiring 5 hours is presented. The transport of NO3- was mediated by a dual system (or dual phasic), whereas only single systems were found for transport of NO2- and NH4+. The Km values for NO3-, NO2-, and NH4+ were, respectively, 0.027, 0.054, and 0.05 millimolar. The Km for mechanism II of NO3- transport could not be defined in this study as it exhibited only apparent first order kinetics up to 1 millimolar.

NASA Program CELSS↗

Design of an elemental analysis system for CELSS research

The results of experiments conducted with higher plants in tightly sealed growth chambers provide definite evidence that the physical closure of a chamber has significant effects on many aspects of a plant's biology. One of these effects is seen in the change in rates of uptake, distribution, and re-release or nutrient elements by the plant (mass balance). Experimental data indicates that these rates are different from those recorded for plants grown in open field agriculture, or in open growth chambers. Since higher plants are a crucial component of a controlled ecological life support system (CELSS), it is important that the consequences of these rate differences be understood with regard to the growth and yield of the plants. A description of a system for elemental analysis which can be used to monitor the mass balance of nutrient elements in CELSS experiments is given. Additionally, data on the uptake of nutrient elements by higher plants grown in a growth chamber is presented.

Schwartzkopf, Steven H.↗

Nutrient Limitation Predisposes A Cultivate of Burkholderia Contaminans From the ISS Water Processor Assembly to Biofilm Formation Under Simulated Microgravity.

The International Space Station (ISS) Water Processor Assembly (WPA) experiences intermittent dormancy between water recycling events thus promoting biofilm formation within the system. In this work we aimed to gain a deeper understanding of the impact of nutrient limitation on bacterial growth and biofilm formation under microgravity in support of biofilm mitigation efforts in exploration water recovery systems. A representative species of bacteria that is commonly cultured from the ISS WPA was cultured in an WPA influent water ersatz formulation tailored for microbiology studies. Burkholderia contaminans was cultured under a simulated microgravity (SµG) treatment in a vertically rotating high-aspect rotating vessel (HARV), with a rotating control (R) in the horizontal plane at the determined optimal rpm of 15 along with a stationary (S) control. At different time points, the bacterial culture and ersatz were harvested for bacterial counts, transcriptomic and nutrient content analyses. Under the test conditions, the culture under SµG treatment consumed the essential nutrients faster than the R and S control cultures in the early stage of growth, thus approaching a nutrient limited growth condition earlier than the controls. The rapid uptake and subsequent depletion of essential nutrients was further illustrated in the transcriptomic response of the SµG culture when compared to the transcriptomic response of the R and S control conditions. The observed starvation response may serve as one element to explain a moderate enhancement of biofilm formation in the SµG treatment. One implication of this investigation is that biofilm mitigation in the ISS environment could be supported by ensuring a steady flow of water as a vehicle for essential nutrients within the WPA to avoid complete consumption which occurs in times of no flow lending to undesired biofilm formation.

Angie Diaz↗

Effect of Fresh Poultry Litter and Compost on Soil Physical and Chemical Properties

Application of poultry litter and compost as a substitute for fertilizer not only uses unwanted waste and decreases expenditures for commercial fertilizer, it adds nutrients to soil for plant uptake. The properties of soil affected by poultry litter were analyzed to determine the positive and negative aspects of using this substitute fertilizer. This study focused on changes associated with saturated hydraulic conductivity, bulk density, nitrate concentrations, and pH after application of varying concentrations of poultry litter and compost. Soil samples from Tennessee Valley Substation in Alabama were analyzed in a laboratory at Alabama A&M University. As a result of the application of fresh poultry litter and compost, we found that the saturated hydraulic conductivity increased and the bulk density decreased, while the pH was generally not affected. Using poultry litter and compost as an alternative commercial fertilizers could be adapted by the farming community to protect the sustainability of our environment. Unwanted waste is used productively and soil is enriched for farming.

Carr, Stacy↗

Cyclic variations in nitrogen uptake rate of soybean plants: ammonium as a nitrogen source

When NO3- is the sole nitrogen source in flowing solution culture, the net rate of nitrogen uptake by nonnodulated soybean (Glycine max L. Merr. cv Ransom) plants cycles between maxima and minima with a periodicity of oscillation that corresponds with the interval of leaf emergence. Since soybean plants accumulate similar quantities of nitrogen when either NH4+ or NO3- is the sole source in solution culture controlled at pH 6.0, an experiment was conducted to determine if the oscillations in net rate of nitrogen uptake also occur when NH4+ is the nitrogen source. During a 21-day period of vegetative development, net uptake of NH4+ was measured daily by ion chromatography as depletion of NH4+ from a replenished nutrient solution containing 1.0 millimolar NH4+. The net rate of NH4+ uptake oscillated with a periodicity that was similar to the interval of leaf emergence. Instances of negative net rates of uptake indicate that the transition between maxima and minima involved changes in influx and efflux components of net NH4+ uptake.

NASA Discipline Life Support Systems↗

A Numerical Study of the Effect of Periodic Nutrient Supply on Pathways of Carbon in a Coastal Upwelling Regime

A size-based ecosystem model was modified to include periodic upwelling events and used to evaluate the effect of episodic nutrient supply on the standing stock, carbon uptake, and carbon flow into mesozooplankton grazing and sinking flux in a coastal upwelling regime. Two ecosystem configurations were compared: a single food chain made up of net phytoplankton and mesozooplankton (one autotroph and one heterotroph, A1H1), and three interconnected food chains plus bacteria (three autotrophs and four heterotrophs, A3H4). The carbon pathways in the A1H1 simulations were under stronger physical control than those of the A3H4 runs, where the small size classes are not affected by frequent upwelling events. In the more complex food web simulations, the microbial pathway determines the total carbon uptake and grazing rates, and regenerated nitrogen accounts for more than half of the total primary production for periods of 20 days or longer between events. By contrast, new production, export of carbon through sinking and mesozooplankton grazing are more important in the A1H1 simulations. In the A3H4 simulations, the turnover time scale of the autotroph biomass increases as the period between upwelling events increases, because of the larger contribution of slow-growing net phytoplankton. The upwelling period was characterized for three upwelling sites from the alongshore wind speed measured by the NASA Scatterometer (NSCAT) and the corresponding model output compared with literature data. This validation exercise for three upwelling sites and a downstream embayment suggests that standing stock, carbon uptake and size fractionation were best supported by the A3H4 simulations, while the simulated sinking fluxes are not distinguishable in the two configurations.

Carr, Mary-Elena↗

Phytoplankton and Climate

Ocean phytoplankton supply about half of the oxygen that humans utilize to sustain life. In this lecture, we will explore how phytoplankton plays a critical role in modulating the Earth's climate. These tiny organisms are the base of the Ocean's food web. They can modulate the rate at which solar heat is absorbed by the ocean, either through direct absorption or through production of highly scattering cellular coverings. They take up and help sequester carbon dioxide, a key greenhouse gas that modulated the Earth's climate. They are the source of cloud nucleation gases that are key to cloud formation/processes. They are also able to modify the nutrient budgets of the ocean through active uptake of inert atmospheric nitrogen. Climate variations have a pronounced impact on phytoplankton dynamics. Long term variations in the climate have been studied through geological interpretations on its influence on phytoplankton populations. The presentation will focus on presenting the numerous linkages that have been observed between climate and phytoplankton and further discuss how present climate change scenarios are likely to impact phytoplankton populations as well as present findings from several studies that have tried to understand how the climate might react to the feedbacks from these numerous climate-phytop|ankton linkages.

Moisan, John R.↗

Nitrogen uptake by wheat seedlings, interactive effects of four nitrogen sources: NO3-, NO2-, NH4+, and urea

The net influx (uptake) rates of NO3-, NH4+, NO2-, and urea into roots of wheat (Triticum aestivum cv Yecora Rojo) seedlings from complete nutrient solutions containing all four compounds were monitored simultaneously. Although urea uptake was too slow to monitor, its presence had major inhibitory effects on the uptake of each of the other compounds. Rates of NO3-, NH4+, and NO2- uptake depended in a complex fashion on the concentration of all four N compounds. Equations were developed which describe the uptake rates of each of the compounds, and of total N, as functions of concentrations of all N sources. Contour plots of the results show the interactions over the range of concentrations employed. The coefficients of these equations provide quantitative values for evaluating primary and interactive effects of each compound on N uptake.

NASA Discipline Number 61-10↗

Root-zone acidity affects relative uptake of nitrate and ammonium from mixed nitrogen sources

Soybean plants (Glycine max [L.] Merr. cv Ransom) were grown for 21 days on 4 sources of N (1.0 mM NO3-, 0.67 mM NO3- plus 0.33 mM NH4+, 0.33 mM NO3- plus 0.67 mM NH4+, and 1.0 mM NH4+) in hydroponic culture with the acidity of the nutrient solution controlled at pH 6.0, 5.5, 5.0, and 4.5. Dry matter and total N accumulation of the plants was not significantly affected by N-source at any of the pH levels except for decreases in these parameters in plants supplied solely with NH4+ at pH 4.5. Shoot-to-root ratios increased in plants which had an increased proportion [correction of proporiton] of NH4(+)-N in their nutrient solutions at all levels of root-zone pH. Uptake of NO3- and NH4+ was monitored daily by ion chromatography as depletion of these ions from the replenished hydroponic solutions. At all pH levels the proportion of either ion that was absorbed increased as the ratio of that ion increased in the nutrient solution. In plants which were supplied with sources of NO3- plus NH4+, NH4+ was absorbed at a ratio of 2:1 over NO3- at pH 6.0. As the pH of the root-zone declined, however, NH4+ uptake decreased and NO3- uptake increased. Thus, the NH4+ to NO3- uptake ratio declined with decreases in root-zone pH. The data indicate a negative effect of declining root-zone pH on NH4+ uptake and supports a hypothesis that the inhibition of growth of plants dependent on NH4(+)-N at low pH is due to a decline in NH4+ uptake and a consequential limitation of growth by N stress.

NASA Discipline Life Support Systems↗

Diurnal changes in net uptake rate of nitrate are associated with changes in estimated export of carbohydrates to roots

The rate of NO3- uptake by soybean (Glycine max [L.] Merrill) roots generally declines during the night in association with progressive depletion of the nonstructural carbohydrate pool in the shoot as well as the concentration of carbohydrates in roots. To determine if NO3- uptake rate changes in response to variations in translocation rate of carbohydrates from shoot to roots per se or to carbohydrate status of the roots, the night period was interrupted with a low light level from incandescent lamps to alter the diurnal pattern of NO3- uptake by roots and export of carbohydrate from shoots of nonnodulated soybean. Depletion of NO3- from replenished, complete nutrient solutions containing 1 mM NO3- was measured by ion chromatography and rates of NO3- uptake were calculated. Changes in export of carbohydrates from shoot to roots during intervals of the night period were calculated as the differences between rates of disappearance in contents of nonstructural carbohydrates and their estimated rates of utilization in shoot respiration and growth. A positive, significant correlation occurred between changes in calculated rates of carbohydrate export from shoots and NO3- uptake rates. Conversely, there was no significant correlation between concentrations of nonstructural carbohydrates in roots and NO3- uptake rates. These results support the hypothesis that carbohydrate flux from shoot to roots has a direct role in regulation of nitrogen uptake by the whole plant.

Non-NASA Center↗

The Southern Ocean Carbon and Climate Observations and Modeling (SOCCOM) Project: A Review

The Southern Ocean serves as the primary gateway through which the intermediate, deep, and bottom waters of the ocean interact with the surface ocean (and thus the atmosphere), and it has a profound influence on the oceanic uptake of anthropogenic carbon and heat as well as nutrient resupply from the abyss to the surface. Yet it has been the least observed and understood region of the world ocean. The Southern Ocean Carbon and Climate Observations and Modeling (SOCCOM) project was implemented in 2014 with a goal to help remedy this deficit in observations and understanding. The SOCCOM project is based on two major advances that have the potential to transform understanding of the Southern Ocean. The first is the development of new biogeochemical sensors mounted on autonomous profiling floats that allow sampling of ocean biogeochemistry in 3-dimensional space. Floats may detect processes with a temporal resolution that ranges from hours to years. The second is that the climate modeling community finally has the computational resources and physical understanding to develop fully coupled climate models that can represent crucial, mesoscale processes in the Southern Ocean, as well as corresponding models that assimilate observations to produce a state estimate. The observational component, based on deployment of profiling floats with oxygen, nitrate, pH and bio-optical sensors, is generating vast amounts of new biogeochemical data that provide a year-round view of the Southern Ocean from the surface to 2000 m. The modeling effort is applying these observations and enhancing our understanding of the current ocean, and reducing uncertainty in projections of future carbon and nutrient cycles and climate. After nine years of operation, including a project renewal in the sixth year, the SOCCOM project has deployed more than 260 profiling floats. These floats have collected over 27,000 vertical profiles throughout the Southern Ocean. A data-assimilating biogeochemical state estimate model has been implemented. Here, the design of the SOCCOM project is reviewed and the scientific results that have been obtained are described. The project’s capability to help meet the observing system priorities outlined for a notional UN Decade for Ocean Sciences Southern Ocean observing system is assessed.

Jorge L. Sarmiento↗