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At least 37 records · Page 2

Single-Cell Genomics of Novel Actinobacteria With the Wood–Ljungdahl Pathway Discovered in a Serpentinizing System

Serpentinite-hosted systems represent modern-day analogs of early Earth environments. In these systems, water-rock interactions generate highly alkaline and reducing fluids that can contain hydrogen, methane, and low-molecular-weight hydrocarbons-potent reductants capable of fueling microbial metabolism. In this study, we investigated the microbiota of Hakuba Happo hot springs (~50°C; pH~10.5–11), located in Nagano (Japan), which are impacted by the serpentinization process. Analysis of the 16S rRNA gene amplicon sequences revealed that the bacterial community comprises Nitrospirae (47%), “Parcubacteria” (19%), Deinococcus-Thermus (16%), and Actinobacteria (9%), among others. Notably, only 57 amplicon sequence variants (ASV) were detected, and fifteen of these accounted for 90% of the amplicons. Among the abundant ASVs, an early-branching, uncultivated actinobacterial clade identified as RBG-16-55-12 in the SILVA database was detected. Ten single-cell genomes (average pairwise nucleotide identity: 0.98–1.00; estimated completeness: 33–93%; estimated genome size: ~2.3 Mb) that affiliated with this clade were obtained. Taxonomic classification using single copy genes indicates that the genomes belong to the actinobacterial class-level clade UBA1414 in the Genome Taxonomy Database. Based on metabolic pathway predictions, these actinobacteria are anaerobes, capable of glycolysis, dissimilatory nitrate reduction and CO 2 fixation via the Wood–Ljungdahl (WL) pathway. Several other genomes within UBA1414 and two related class-level clades also encode the WL pathway, which has not yet been reported for the Actinobacteria phylum. For the Hakuba actinobacterium, the energy metabolism related to the WL pathway is likely supported by a combination of the Rnf complex, group 3b and 3d [NiFe]-hydrogenases, [FeFe]-hydrogenases, and V-type (H + /Na + pump) ATPase. The genomes also harbor a form IV ribulose 1,5-bisphosphate carboxylase/oxygenase (RubisCO) complex, also known as a RubisCO-like protein, and contain signatures of interactions with viruses, including clustered regularly interspaced short palindromic repeat (CRISPR) regions and several phage integrases. This is the first report and detailed genome analysis of a bacterium within the Actinobacteria phylum capable of utilizing the WL pathway. The Hakuba actinobacterium is a member of the clade UBA1414/RBG-16-55-12, formerly within the group “OPB41.” We propose to name this bacterium ‘Candidatus Hakubanella thermoalkaliphilus.'

59 BASIC BIOLOGICAL SCIENCES↗

Evaluation of Contact Resistance and Fin Effectiveness of Enhanced, Brazed "Dogbone" Fin and Serpentine Tube Heat Exchangers for Air Conditioning and Heat Pump Applications

The energy consumption due to air conditioning is projected to increase by 1.3 and 4.5 times by 2050 compared to 2010 for members and non-members of the Organization of Economic Coordination and Development (OECD), respectively. Greenhouse Gas (GHG) emissions must be carefully managed to minimize their hazardous contribution to climate change. Air conditioners (AC) and heat pumps (HP) contribute with direct GHG emissions through systemic refrigerant leakage, which consequently degrades the system’s performance and therefore increases its indirect GHG emissions as well. To address this issue, the goals of new systems include minimizing leakage risk, using low global warming potential (GWP) refrigerants such as natural refrigerants, and increasing system efficiency. This paper presents part of the efforts in the development of a brazed “dogbone” fin to continuous serpentine tube heat exchanger (HX) for AC/HP applications. The main advantages of such technology are: 1) The potential to reduce 90% or more of the tube return-bends brazed joints compared to conventional tube-fin heat exchangers, thus minimizing leakage vulnerability, enabling the use of natural refrigerants like Propane and Ammonia that carry other concerning risks of flammability and toxicity ; and 2) The brazed fin to the tube joints should yield very low contact resistance. In order to quantify and estimate the impacts of contact resistance and fin effectiveness, a numerical-experimental study is investigated. The novel enhanced brazed “dog-bone” fin is compared to an equivalent pressure expanded fin. The results showed that the expanded fin has consistently greater effective heat transfer but greater contact resistance as well. Furthermore, the brazed fins have up to 20% lower pressure drop. The trade-off comparison shows that the thermal-hydraulic ratio between the two fins is equivalent for air velocities below 2m/s; for greater velocities, however, the expanded fin is favored since it has less fin efficiency penalty. For HVAC&R applications, the air velocities are typically low which makes the proposed technology competitive and a viable option in the pursuit of refrigerant leakage reduction.

30 DIRECT ENERGY CONVERSION↗

Experimental Investigation of a Phase Change Material Charged Serpentine Heat Exchanger with Louvered Fins

Phase change material heat exchangers (PCM-HX) can be used as a latent heat thermal energy storage (LHTES) component in heat pump applications to further enhance the efficiency of a heat pump as well as to yield financial savings by peak-load shifting. In this paper, a low-cost commercially available aluminum serpentine heat exchanger with louvered fins was experimentally investigated to check its thermal performance as a PCM-HX. A transparent rectangular box fabricated from acrylic plates served as a PCM container. Two cameras were used to capture the phase change process of the PCM on the front and top sides of the container during the experiment. A total of 88 installed temperature sensors throughout the test setup and a mass flow meter enabled a quantitative analysis of the PCM-HX as well. The energy balance deviation between the estimated theoretical and experimentally calculated PCM storage was ±14% considering the often-neglected heat loss and thermal mass of the PCM-HX. PCM temperature profiles, charge and discharge rates, and energy densities under different test conditions were also investigated.

42 ENGINEERING↗

Insights into the physiological and genomic characterization of three bacterial isolates from a highly alkaline, terrestrial serpentinizing system

The terrestrial serpentinite-hosted ecosystem known as “The Cedars” is home to a diverse microbial community persisting under highly alkaline (pH ~ 12) and reducing (Eh < -550 mV) conditions. This extreme environment presents particular difficulties for microbial life, and efforts to isolate microorganisms from The Cedars over the past decade have remained challenging. Herein, we report the initial physiological assessment and/or full genomic characterization of three isolates: Paenibacillus sp. Cedars (‘Paeni-Cedars’), Alishewanella sp. BS5-314 (‘Ali-BS5-314’), and Anaerobacillus sp. CMMVII (‘Anaero-CMMVII’). Paeni-Cedars is a Gram-positive, rod-shaped, mesophilic facultative anaerobe that grows between pH 7–10 (minimum pH tested was 7), temperatures 20–40°C, and 0–3% NaCl concentration. The addition of 10–20 mM CaCl 2 enhanced growth, and iron reduction was observed in the following order, 2-line ferrihydrite > magnetite > serpentinite ~ chromite ~ hematite. Genome analysis identified genes for flavin-mediated iron reduction and synthesis of a bacillibactin-like, catechol-type siderophore. Ali-BS5-314 is a Gram-negative, rod-shaped, mesophilic, facultative anaerobic alkaliphile that grows between pH 10–12 and temperatures 10–40°C, with limited growth observed 1–5% NaCl. Nitrate is used as a terminal electron acceptor under anaerobic conditions, which was corroborated by genome analysis. The Ali-BS5-314 genome also includes genes for benzoate-like compound metabolism. Anaero-CMMVII remained difficult to cultivate for physiological studies; however, growth was observed between pH 9–12, with the addition of 0.01–1% yeast extract. Anaero-CMMVII is a probable oxygen-tolerant anaerobic alkaliphile with hydrogenotrophic respiration coupled with nitrate reduction, as determined by genome analysis. Based on single-copy genes, ANI, AAI and dDDH analyses, Paeni-Cedars and Ali-BS5-314 are related to other species (P. glucanolyticus and A. aestuarii, respectively), and Anaero-CMMVII represents a new species. The characterization of these three isolates demonstrate the range of ecophysiological adaptations and metabolisms present in serpentinite-hosted ecosystems, including mineral reduction, alkaliphily, and siderophore production.

59 BASIC BIOLOGICAL SCIENCES↗

Effects of exogenous citric acid on the concentration and spatial distribution of Ni, Zn, Co, Cr, Mn and Fe in leaves of Noccaea caerulescens grown on a serpentine soil

The aim of this study was to show the potential of citric acid in increasing the concentration of Ni, Zn, Co, Cr, Mn and Fe in leaves of the hyperaccumulator Noccaea caerulescens. Synchrotron x-ray fluorescence (μ-XRF) images were collected to assess the distribution of metals in leaves. Applying citric acid (20 mmol kg -1 ) to soil increased in 14-, 10-, 7-, 2- and 1.4- fold the concentration of Mn, Fe, Co, Ni, and Cr, respectively, compared to the control. The μ-XRF imaging revealed that Ni and Zn were not spatially correlated across the leaf. We observed a clear partitioning of Zn between veins and surrounding leaf cells while Ni was more evenly distributed between veins and leaf blade. The accumulation of metals in citric acid treated plants did not change the Ni and Zn distribution pattern in leaves but altered the Mn distribution. It seems that Mn reached toxic concentrations in leaves and we hypothesize that a mechanism driven by transpiration through the xylem was used to excrete the metal. Our results show that citric acid can enhance metal accumulation by N. caerulescens and have impact for soil remediation by either decreasing the time for clean up or increasing the access to non-labile pools of metals in soil.

54 ENVIRONMENTAL SCIENCES↗

Triple oxygen and hydrogen stable isotope composition of hydroxyl water in Orgueil (CI-type) and Tagish Lake (C2-type) carbonaceous chondrites

The primitive carbonaceous chondrites are of interest to cosmochemical science because they contain relatively large amounts of ‘water’ (H 2 O and/or OH – ) within phyllosilicate minerals. This water is evidence for the accretion of ices by their parent planetesimals, and thus represents an archive of the isotopic compositions of H 2 O in the protoplanetary environments. Here, in this study, we used thermogravimetry-enabled laser spectroscopy (TGA-IRIS) analyses of the Orgueil and Tagish Lake meteorites to make δ 2 H, δ 18 O, and Δ′ 17 O measurements of the H 2 O and OH – contained in the different hydrous minerals that comprise each meteorite. In Orgueil, we measured mass-weighted averages of OH – in the saponite and serpentine phyllosilicate matrix to be δ 2 H = 192 ‰, δ 18 O = 1.5 ‰, which are unquestionably of extraterrestrial origin with Δ′ 17 O = 1.0 ‰. For Tagish Lake, analogous values of OH– in the saponite and serpentine phyllosilicate matrix are δ 2 H = 704 ‰, δ 18 O = 11.3 ‰, and are similarly unambiguously extraterrestrial with Δ′ 17 O = 0.82 ‰. We estimate that the parent H 2 O involved in aqueous alteration of Orgueil had δ 18 O value ≥ +23 ‰. In Orgueil, we interpret the phyllosilicate petrographic relationships, and the δ 18 O values of OH – in saponite and serpentine to indicate that saponite formed first, at a lower temperature by 35 to 53 °C than serpentine. This suggests that the Orgueil parent body experienced increasing temperature during the phase of active aqueous alteration (prograde) which set the δ 18 O OH values of the serpentine and saponite. In the case of Tagish Lake, serpentine formed at a lower temperature by 32 to 60 °C than saponite, for the simplest case with constant δ 18 O H2O values. If serpentine formed first, followed by saponite formation at 32 to 60 °C °C higher temperature, this suggests that Tagish Lake sample TL1 underwent prograde aqueous alteration as the parent body heated up. We find evidence that the parent H 2 O for Orgueil, Tagish Lake sample TL1, and Murchison (based on data from a previous study) may have had Δ′ 17 O values of >0.64 ‰.

Aqueous alteration↗

29 Si solid state MAS NMR study on leaching behaviors and chemical stability of different Mg-silicate structures for CO 2 sequestration

Silicon is one of the most earth abundant elements, and thus, the fate and reactivity of silicate materials are often important for various energy and environmental technologies including carbon sequestration, where CO 2 is captured and stored as a thermodynamically stable solid carbonate phase. Thus, understanding the structures and chemistries of different silicate phases has become an important research aim. Here in this study, the changes in the silicate structures (Q 0 –Q 4 ) of heat-treated Mg-bearing mineral (serpentine) exposed to a CO 2 -water system (carbonic acid) was investigated using 29 Si MAS NMR, XRPD and ICP-OES and the identified structures were employed to explain complex leaching behaviors of silicate materials. The 29 Si MAS NMR and XRPD analysis indicated that the heat-treated serpentine is a mixture of amorphous (Q 1 : dehydroxylate I, Q 2 : enstatite, Q 4 : silica) and crystalline (Q 0 : forsterite, Q 3 : dehydroxylate II and serpentine) phase, while natural serpentine mineral has single crystalline Q 3 silicate structure. The leaching experiments showed that both Mg and Si in the amorphous silicate structures (Q 1 : dehydroxylate I, Q 2 : enstatite) are more soluble than those in crystalline phase (Q 0 : forsterite, Q 3 : dehydroxylate II and serpentine). Therefore, tuning the silicate structure towards Q 1 and Q 2 would significantly improve carbon sequestration potential of silicate minerals, whereas silicate materials with Q 3 structure would provide great chemical stabilities in acidic conditions. The solubilities of silicate structures were in the order of Q 1 (dehydroxylate I) > Q2 (enstatite) >> Q0 (forsterite) > Q3 (dehydroxylate II) > Q 3 (serpentine) and this finding can be used to better design a wide range of energy and environmental materials and reaction systems.

25 ENERGY STORAGE↗

In situ deformation of antigorite-olivine two-phase mixtures: Implications for dynamics and seismic anisotropy in the mantle wedge

Water released from hydrous minerals in subducting slabs reacts with the overlying plate, resulting in widespread serpentinization in the mantle wedge. Deformation of serpentinized peridotites has been invoked to explain forearc seismic anisotropy, yet studies of the mechanical properties and deformation behaviors of serpentine-bearing multiphase aggregates remain limited. Here we deformed olivine-antigorite mixtures containing 70, 50, and 20 vol.% of antigorite at 2.5 – 7.6 GPa, 673 K and strain rates of ∼10 –5 –10 –4 s –1 . Elasto-viscoplastic self-consistent simulations, constrained by synchrotron X-ray diffraction (XRD) data, were used to estimate lattice strain, stress–strain partitioning, crystallographic preferred orientations (CPO) development, and aggregate strength. Selected run products were also analyzed by electron backscatter diffraction for comparison with the CPO results obtained from XRD experiments. We found olivine transitions from A- or B-type to C-type when antigorite fraction drops to 20 vol.%, coinciding with a microstructural change from interconnected weak layers to a load-bearing framework (LBF). An additional run on a sample Atg50/Ol50 with preexisting microstructures suggested the formation of LBF was promoted by these microstructures, although the preexisting antigorite CPO has been overprinted at 20.8 % strain and could be erased completely by subsequent deformation in nature. Estimated viscosity of the two-phase mixtures suggests that low-degree serpentinization (≤20 %) in the mantle wedge may increase the strength of olivine-rich peridotite and hinder slab-mantle decoupling, whereas high-degree serpentinization (≥50–70 %) weakens the peridotite and favors decoupling if sufficient viscosity contrast (>10) develops. Seismic anisotropy shows a nonlinear dependence on antigorite fraction: antigorite CPO governs the anisotropy of the mixtures with ≥50 vol.% antigorite, whereas olivine CPO dominates at low fractions (∼20 vol.%). The presence of pre-existing microstructures reduces seismic anisotropy of the deformed mixtures, however the persistence of pre-existing CPO in actively subducting slabs remains uncertain, making their significance over geological timescales questionable.

Crystallographic preferred orientation↗

Flow field design for zero-gap microbial electrolysis cells using synthetic and real wastewater

Increasing performance in microbial electrolysis cells (MECs) requires the development of optimized reactor configurations with minimal internal resistance and capable to operate with real wastewater. Here, the impact of two different flow fields (serpentine and circular) was examined in zero-gap MECs with synthetic and real wastewaters. The serpentine flow field enabled a uniform distribution of the electrolyte in the anode chamber, resulting in larger current densities at lower flow rates compared to the circular flow field. Electrochemical tests using synthetic media with high buffer capacity revealed more stable and higher performance with the serpentine flow field compared to the circular flow path, producing larger current density (23.7 ± 0.8 A/m 2 vs 21.9 ± 5.6 A/m 2 ), hydrogen production rate (75.8 ± 4.1 L/L-d vs 54.3 ± 2.4 L/L-d), cathodic coulombic efficiency (>91 % vs >50 %), and an overall lower internal resistance (12.5 ± 0.5 mΩm 2 vs 14.8 ± 3.7 mΩm 2 ). Continuous operation for over 30 days with real wastewater indicated higher tolerance of the MECs with serpentine flow field toward media with large concentration of suspended solids, producing a current density of 5.4 ± 1.1 A/m 2 and a hydrogen production rate of 22.2 ± 6.2 L/L-d. Furthermore, the results presented here underscore the importance of reactor design and architecture in optimizing MEC performance for hydrogen production from liquid wastes.

flow path↗

Stimulated geologic hydrogen: from mechanistic control to engineered rock transformation

Geologic hydrogen (GeoH 2 ) generated from subsurface iron-rich rock–water reaction (i.e., serpentinization) is emerging as a promising candidate for the next primary energy source. Yet, accelerating GeoH 2 production from geological to human timescales via enhanced serpentinization remains a formidable scientific and technical challenge. Here, in this Review, we decipher the mechanistic control and explore strategies for accelerating in situ, engineered iron-rich rock transformation into carbon-free GeoH 2 by orders of magnitude. Serpentinization rate is hindered by low porosity and permeability of source rocks, suboptimal temperatures, unfavorable water chemistry, inefficient Fe 2+ -to-Fe 3+ conversion, thermodynamic constraints, and low reactive surface area. While closed-system experiments provide valuable mechanistic insights, open-system conditions with fluid circulation are more crucial for economically viable GeoH 2 production. We assess stimulation techniques from enhanced hydrocarbon and geothermal recovery as tools to be adopted or adapted for increasing reactive surface areas for stimulated GeoH2 production. We estimate that 7.40 × 10 5 to 1.73 × 10 6 million metric tons (Mt) of hydrogen could be engineered over 20 to 50 years from about 10% iron-rich rocks within 10 km depth of continental crust. Enabling GeoH 2 as a viable energy source requires not only advancing scientific frontiers but also forming a global GeoH 2 research network and innovation ecosystem to address the critical scientific, technical, societal, economic, and policy challenges.

08 HYDROGEN↗

Citric acid-assisted accumulation of Ni and other metals by Odontarrhena muralis: Implications for phytoextraction and metal foliar distribution assessed by μ-SXRF

Odontarrhena muralis is one of the most promissing plant species for Ni phytomining, and soil amendments can further increase its Ni phytoextraction ability. Here we investigated whether Ni phytomining/phytoremediation using this Ni hyperaccumulator can benefit from applying citric acid to a serpentine soil that is naturally enriched in Ni (>1000 mg kg -1 ). Synchrotron micro X-ray fluorescence (μ-SXRF) was used to image Ni and other metal distributions in whole fresh leaves of O. muralis. Leaf Ni accumulation in plants grown on citric acid-amended soil increased up to 55% while Co, Cr, Fe, Mn, and Zn concentrations were 4-, 14-, 6-, 7- and 1.3-fold higher than the control treatment. O. muralis presented high bioconcentration factors (leaf to soil concentration ratio) to Ni and Zn whereas Cr was seemingly excluded from uptake. The μ-SXRF images showed a uniform distribution of Ni, preferential localization of Co in the leaf tip, and clear concentration of Mn in the base of trichomes. The citric acid treatments strongly increased the Co fluoerescence intensity in the leaf tip and altered the spatial distribution of Mn across the leaf, but there was no difference in Ni fluorescence counts between the trichome-base region and the bulk leaf. Our data from a serpentine soil suggests that citrate treatment enhances Ni uptake, but Co is excreted from leaves even in low leaf concentrations, which can make Co phytoming using O. muralis unfeasible in natural serpentine soils.

54 ENVIRONMENTAL SCIENCES↗

Geologic hydrogen as an emerging fuel: experimental insights, thermodynamics, kinetics, and reactive transport modeling

Geologic hydrogen (GeoH 2 ) is emerging as a viable clean energy source. It is largely produced through serpentinization, a geological process in which ultramafic rocks react with water under suitable temperature and pressure. Here, this review synthesizes the current understanding of H 2 generation by serpentinization, with an emphasis on reaction mechanisms, kinetics, and thermodynamics, as well as on modeling flow and transport of reacting fluids in geological formations. We describe the role of mineral assemblages, such as olivine and pyroxene, fluid-rock interactions, and catalytic surfaces, in influencing GeoH 2 yield and reaction rates. By integrating models of reaction kinetics, subsurface reactive flow and transport, and the serpentinization process, and by accounting for the thermodynamic state of the system, this review aims to guide future GeoH 2 research and to evaluate the potential of natural hydrogen as a sustainable clean energy source.

Moradi, Rasoul [Univ. of Southern California, Los ↗

Mass transport limitations in polymer electrolyte water electrolyzers using spatially-resolved current measurement

Here this work utilizes spatially-resolved current measurements to provide insight into mass transport limitations in electrolyzers that are not observable from traditional polarization measurement. In this study, two types of flow-fields (parallel and triple-serpentine) and two types of diffusion media (patterned porous thin titanium foil LGDLs and Ir-coated titanium felt PTLs) were examined. A non-uniform current distribution dominated by mass transport limitations was observed to be instigated by the restriction of liquid water transport to catalyst sites. Additionally, conditions are revealed which yield similar polarization performance but dissimilar current distributions. In such cases, the transport limitations for different architectures and porous media affect polarization in different regions of the active area. Furthermore, the triple-serpentine flow-field used in this study performs better than the parallel flow-field under mass transport limited operating conditions. This indicates that the parallel flow-field used in this study is more susceptible to starvation than the triple-serpentine flow-field for the electrolyzer studied.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗