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At least 37 records · Page 2

Application of chord length distributions and principal component analysis for quantification and representation of diverse polycrystalline microstructures

Highlights: • Microstructure quantification based on directional chord length distribution and principal component analysis is presented • A boundary-based algorithm of calculations of chord length distributions is introduced • Utility of the quantification framework is shown in three case studies on synthetic, experimental, and simulation datasets • Angularly resolved chord length distribution captures essential details of grain size and shape in diverse microstructures • Low-dimensional representations of directional chord length distributions are obtained using principal component analysis - Abstract: Quantification of mesoscale microstructures of polycrystalline materials is important for a range of practical tasks of materials design and development. The current protocols of quantifying grain size and morphology often rely on microstructure metrics (e.g., mean grain diameter) that overlook important details of the mesostructure. In this work, we present a quantification framework based on directionally resolved chord length distribution and principal component analysis as a means of extracting additional information from 2-D microstructural maps. Towards this end, we first present in detail a method for calculating chord length distribution based on boundary segments available in modern digital datasets (e.g., from microscopy post-processing) and their low-rank representations by principal component analysis. The utility of the proposed framework for capturing grain size, morphology, and their anisotropy for efficient visualization, representation, and specification of polycrystalline microstructures is then demonstrated in case studies on datasets from synthetic generation, experiments (on Ni-base superalloys), and simulations (on steel during recrystallization).

36 MATERIALS SCIENCE↗

VizBrick: A GUI-based Interactive Tool for Authoring Semantic Metadata for Building Datasets

Brick ontology is a unified semantic metadata schema to address the stand-ardization problem of buildings' physical, logical, and virtual assets and the relationships between them. Creating a Brick model for a building dataset means that the dataset's contents are semantically described using the standard terms defined in the Brick ontology. It will enable the benefits of data standardization, without having to recollect or reorganize the data and opens the possibility of automation leveraging the machine readability of the semantic metadata. The problem is that authoring Brick models for building datasets often requires knowledge of semantic technology (e.g., on-tology declarations and RDF syntax) and leads to repeated manual trial and error processes, which can be time-consuming and challenging to do with-out an interactive visual representation of the data. We developed VizBrick, a tool with a graphical user interface that can assist users in creating Brick models visually and interactively without having to understand the Re-source Description Framework (RDF) syntax. VizBrick provides handy ca-pabilities such as keyword search for easy find of relevant brick concepts and relations to their data columns and automatic suggestions of concept mapping. In this demonstration, we present a use-case of VizBrick to show-case how a Brick model can be created for a real-world building dataset.

Lee, Sangkeun (Matt)↗

An Interactive Visual Analytics Framework for Multi-Field Data in a Geo-Spatial Context

Climate research produces a wealth of multivariate data. These data often have a geospatial reference and so it is of interest to show them within their geospatial context. One can consider this configuration as a multi field visualization problem, where the geospace provides the expanse of the field. However, there is a limit on the amount of multivariate information that can be fit within a certain spatial location, and the use of linked multivari ate information displays has previously been devised to bridge this gap. In this paper we focus on the interactions in the geographical display, present an implementation that uses Google Earth, and demonstrate it within a tightly linked parallel coordinates display. Several other visual representations, such as pie and bar charts are integrated into the Google Earth display and can be interactively manipulated. Further, we also demonstrate new brushing and visualization techniques for parallel coordinates, such as fixedwindow brushing and correlationenhanced display. We conceived our system with a team of climate researchers, who already made a few important discov eries using it. This demonstrates our system’s great potential to enable scientific discoveries, possibly also in oth er domains where data have a geospatial reference.

Environmental Molecular Sciences Laboratory↗

The Lund jet plane

Lund diagrams, a theoretical representation of the phase space within jets, have long been used in discussing parton showers and resummations. We point out that they can be created for individual jets through repeated Cambridge/Aachen declustering, providing a powerful visual representation of the radiation within any given jet. Concentrating here on the primary Lund plane, we outline some of its analytical properties, highlight its scope for constraining Monte Carlo simulations and comment on its relation with existing observables such as the zg variable and the iterated soft-drop multiplicity. We then examine its use for boosted electroweak boson tagging at high momenta. It provides good performance when used as an input to machine learning. Much of this performance can be reproduced also within a transparent log-likelihood method, whose underlying assumption is that different regions of the primary Lund plane are largely decorrelated. This suggests a potential for unique insight and experimental validation of the features being used by machine-learning approaches.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Online Interactive Platform for COVID-19 Literature Visual Analytics: Platform Development Study

Background Papers on COVID-19 are being published at a high rate and concern many different topics. Innovative tools are needed to aid researchers to find patterns in this vast amount of literature to identify subsets of interest in an automated fashion. Objective We present a new online software resource with a friendly user interface that allows users to query and interact with visual representations of relationships between publications. Methods We publicly released an application called PLATIPUS (Publication Literature Analysis and Text Interaction Platform for User Studies) that allows researchers to interact with literature supplied by COVIDScholar via a visual analytics platform. This tool contains standard filtering capabilities based on authors, journals, high-level categories, and various research-specific details via natural language processing and dozens of customizable visualizations that dynamically update from a researcher’s query. Results PLATIPUS is available online and currently links to over 100,000 publications and is still growing. This application has the potential to transform how COVID-19 researchers use public literature to enable their research. Conclusions The PLATIPUS application provides the end user with a variety of ways to search, filter, and visualize over 100,00 COVID-19 publications.</:p>

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Creating an Interprocedural Analyst-Oriented Data Flow Representation for Binary Analysts (CIAO)

National security missions require understanding third-party software binaries, a key element of which is reasoning about how data flows through a program. However, vulnerability analysts protecting software lack adequate tools for understanding data flow in binaries. To reduce the human time burden for these analysts, we used human factors methods in a rolling discovery process to derive user-centric visual representation requirements. We encountered three main challenges: analysis projects span weeks, analysis goals significantly affect approaches and required knowledge, and analyst tools, techniques, conventions, and prioritization are based on personal preference. To address these challenges, we initially focused our human factors methods on an attack surface characterization task. We generalized our results using a two-stage modified sorting task, creating requirements for a data flow visualization. We implemented these requirements partially in manual static visualizations, which we informally evaluated, and partially in automatically generated interactive visualizations, which have yet to be integrated into workflows for evaluation. Our observations and results indicate that 1) this data flow visualization has the potential to enable novel code navigation, information presentation, and information sharing, and 2) it is an excellent time to pursue research applying human factors methods to binary analysis workflows.

42 ENGINEERING↗

RE-EXAMINING SUNSPOT TILT ANGLE TO INCLUDE ANTI-HALE STATISTICS

Sunspot groups and bipolar magnetic regions (BMRs) serve as an observational diagnostic of the solar cycle. We use Debrecen Photohelographic Data (DPD) from 1974-2014 that determined sunspot tilt angles from daily white light observations, and data provided by Li and Ulrich that determined sunspot magnetic tilt angle using Mount Wilson magnetograms from 1974-2012. The magnetograms allowed for BMR tilt angles that were anti-Hale in configuration, so tilt values ranged from 0 to 360° rather than the more common ±90°. We explore the visual representation of magnetic tilt angles on a traditional butterfly diagram by plotting the mean area-weighted latitude of umbral activity in each bipolar sunspot group, including tilt information. The large scatter of tilt angles over the course of a single cycle and hemisphere prevents Joy's law from being visually identified in the tilt-butterfly diagram without further binning. The average latitude of anti-Hale regions does not differ from the average latitude of all regions in both hemispheres. The distribution of anti-Hale sunspot tilt angles are broadly distributed between 0 and 360° with a weak preference for east-west alignment 180° from their expected Joy's law angle. The anti-Hale sunspots display a log-normal size distribution similar to that of all sunspots, indicating no preferred size for anti-Hale sunspots. We report that 8.4% ± 0.8% of all bipolar sunspot regions are misclassified as Hale in traditional catalogs. This percentage is slightly higher for groups within 5° of the equator due to the misalignment of the magnetic and heliographic equators.

79 ASTRONOMY AND ASTROPHYSICS↗

Slycat™ User Manual

Slycat™ is a web-based system for performing data analysis and visualization of potentially large quantities of remote, high-dimensional data. Slycat™ specializes in working with ensemble data. An ensemble is a group of related data sets, which typically consists of a set of simulation runs exploring the same problem space. An ensemble can be thought of as a set of samples within a multi-variate domain, where each sample is a vector whose value defines a point in high-dimensional space. To understand and describe the underlying problem being modeled in the simulations, ensemble analysis looks for shared behaviors and common features across the group of runs. Additionally, ensemble analysis tries to quantify differences found in any members that deviate from the rest of the group. The Slycat™ system integrates data management, scalable analysis, and visualization. Results are viewed remotely on a user’s desktop via commodity web clients using a multi-tiered hierarchy of computation and data storage, as shown in Figure 1. Our goal is to operate on data as close to the source as possible, thereby reducing time and storage costs associated with data movement. Consequently, we are working to develop parallel analysis capabilities that operate on High Performance Computing (HPC) platforms, to explore approaches for reducing data size, and to implement strategies for staging computation across the Slycat™ hierarchy. Within Slycat™, data and visual analysis are organized around projects, which are shared by a project team. Project members are explicitly added, each with a designated set of permissions. Although users sign-in to access Slycat™, individual accounts are not maintained. Instead, authentication is used to determine project access. Within projects, Slycat™ models capture analysis results and enable data exploration through various visual representations. Although for scientists each simulation run is a model of real-world phenomena given certain conditions, we use the term model to refer to our modeling of the ensemble data, not the physics. Different model types often provide complementary perspectives on data features when analyzing the same data set. Each model visualizes data at several levels of abstraction, allowing the user to range from viewing the ensemble holistically to accessing numeric parameter values for a single run. Bookmarks provide a mechanism for sharing results, enabling interesting model states to be labeled and saved.

97 MATHEMATICS AND COMPUTING↗

Exploring Time-Varying Multivariate Volume Data Using Matrix of Isosurface Similarity Maps

We present a novel visual representation and interface named the matrix of isosurface similarity maps (MISM) for effective exploration of large time-varying multivariate volumetric data sets. MISM synthesizes three types of similarity maps (i.e., self, temporal, and variable similarity maps) to capture the essential relationships among isosurfaces of different variables and time steps. Additionally, it serves as the main visual mapping and navigation tool for examining the vast number of isosurfaces and exploring the underlying time-varying multivariate data set. We present temporal clustering, variable grouping, and interactive filtering to reduce the huge exploration space of MISM. In conjunction with the isovalue and isosurface views, MISM allows users to identify important isosurfaces or isosurface pairs and compare them over space, time, and value range. More importantly, we introduce path recommendation that suggests, animates, and compares traversal paths for effectively exploring MISM under varied criteria and at different levels-of-detail. A silhouette-based method is applied to render multiple surfaces of interest in a visually succinct manner. We demonstrate the effectiveness of our approach with case studies of several time-varying multivariate data sets and an ensemble data set, and evaluate our work with two domain experts.

97 MATHEMATICS AND COMPUTING↗

The Cosmic V-Web

The network of filaments with embedded clusters surrounding voids, which has been seen in maps derived from redshift surveys and reproduced in simulations, has been referred to as the cosmic web. A complementary description is provided by considering the shear in the velocity field of galaxies. The eigenvalues of the shear provide information regarding whether or not a region is collapsing in three dimensions, which is the condition for a knot, expanding in three dimensions, which is the condition for a void, or in the intermediate condition of a filament or sheet. The structures that are quantitatively defined by the eigenvalues can be approximated by iso-contours that provide a visual representation of the cosmic velocity (V) web. The current application is based on radial peculiar velocities from the Cosmicflows-2 collection of distances. The three-dimensional velocity field is constructed using the Wiener filter methodology in the linear approximation. Eigenvalues of the velocity shear are calculated at each point on a grid. Here, knots and filaments are visualized across a local domain of diameter ∼0.1c.

79 ASTRONOMY AND ASTROPHYSICS↗

Distributed Neural Representation for Reactive In Situ Visualization

Implicit neural representations (INRs) have emerged as a powerful tool for compressing large-scale volume data. This opens up new possibilities for in situ visualization. However, the efficient application of INRs to distributed data remains an underexplored area. Here, in this work, we develop a distributed volumetric neural representation and optimize it for in situ visualization. Our technique eliminates data exchanges between processes, achieving state-of-the-art compression speed, quality and ratios. Our technique also enables the implementation of an efficient strategy for caching large-scale simulation data in high temporal frequencies, further facilitating the use of reactive in situ visualization in a wider range of scientific problems. We integrate this system with the Ascent infrastructure and evaluate its performance and usability using real-world simulations.

Wu, Qi↗

The VAST Challenge: History, Scope, and Outcomes: An introduction to the Special Issue

Visual analytics aims to facilitate human insight from complex data via a combination of visual representations, interaction techniques, and supporting algorithms. To create new tools and techniques that achieve this goal requires that researchers have an understanding of analytical questions to be addressed, data that illustrates the complexities and ambiguities found in realistic analytic settings, and methods for evaluating whether the plausible insights are gained through use of the new methods. However, researchers do not, generally speaking, have access to analysts who can articulate their problems or operational data that is used for analysis. To fill this gap, the Visual Analytics Science and Technology (VAST) Challenge has been held annually since 2006. The VAST Challenge provides an opportunity for researchers to experiment with realistic but not real problems, using realistic synthetic data with known events embedded. Since its inception, the VAST Challenge has evolved along with the visual analytics research community to pose more complex challenges, ranging from text analysis to video analysis to large scale network log analysis. The seven years of the VAST Challenge have seen advancements in research and development, education, evaluation, and in the challenge process itself. This special issue of Information Visualization highlights some of the noteworthy advancements in each of these areas. Some of these papers focus on important research questions related to the challenge itself, and other papers focus on innovative research that has been shaped by participation in the challenge. This paper describes the VAST Challenge process and benefits in detail. It also provides an introduction to and context for the remaining papers in the issue.

visual analytics, sensemaking, evaluation, crowdso↗

A Visual Understanding of Circular Dichroism Spectroscopy

Mapping chemical and structural properties to electronic and magnetic responses is critical to many applications such as quantum information science, where the precise storage and transmission of unique information is paramount. Specifically, constructing molecules and materials that provide strong polarized responses at tunable frequencies and with large anisotropies is key to optical processing of quantum information. Chiral molecules provide chiroptical response to circularly polarized light, making them attractive for quantum information science and other applications related to sensing, polarized photodetectors, and spintronics. Predicting a molecular design, a priori, with large anisotropies to circularly polarized light is challenging due to the complex interplay between electric and magnetic components of the optical response. In this work, we explore a visual representation of the electronic chiroptical response by decomposing the rotary strength into its constituent components. Here, we make use of the intuitive electronic oscillator framework to develop classical intuition regarding the rotary strength and its constituents. We explore three model chemical systems that exhibit local and global chirality. Our analysis reveals that local chirality necessarily exhibits competition between the local chiral center and chirality induced in other fragments of the molecule, resulting in both unexpected nonmonotonic trends and sign flips in chemically adjacent geometries. Furthermore, we can visually distinguish between local and global chirality via examination of the transition chiral tensor. Interestingly, we make strong connections to ferromagnetic and antiferromagnetic spin systems in that chiroptically inactive transitions exhibit antiferromagnetic-like alternating orbital patterns while active transitions show domain formation in an ferromagnetic-like alignment that produces a net chiroptical response.

36 MATERIALS SCIENCE↗

Human Factors Principles in Information Dashboard Design

When planning for control room upgrades, nuclear power plants have to deal with a multitude of engineering and operational impacts. This will inevitably include several human factors considerations, including physical ergonomics of workstations, viewing angles, lighting, seating, new communication requirements, and new concepts of operation. In helping nuclear power utilities to deal with these challenges, the Idaho National Laboratory (INL) has developed effective methods to manage the various phases of the upgrade life cycle. These methods focus on integrating human factors engineering processes with the plant’s systems engineering process, a large part of which is the development of end-state concepts for control room modernization. Such an end-state concept is a description of a set of required conditions that define the achievement of the plant’s objectives for the upgrade. Typically, the end-state concept describes the transition of a conventional control room, over time, to a facility that employs advanced digital automation technologies in a way that significantly improves system reliability, reduces human and control room-related hazards, reduces system and component obsolescence, and significantly improves operator performance. To make the various upgrade phases as concrete and as visible as possible, an end-state concept would include a set of visual representations of the control room before and after various upgrade phases to provide the context and a framework within which to consider the various options in the upgrade. This includes the various control systems, human-system interfaces to be replaced, and possible changes to operator workstations. This paper describes how this framework helps to ensure an integrated and cohesive outcome that is consistent with human factors engineering principles and also provide substantial improvement in operator performance. The paper further describes the application of this integrated approach in the strategic modernization program at a nuclear power plant where legacy systems are upgraded to advanced digital technologies through a systematic process that links human factors principles to the systems engineering process. This approach will help to create an integrated control room architecture beyond what is possible for individual subsystem upgrades alone. In addition, several human factors design and evaluation methods were used to develop the end-state concept, including interactive sessions with operators in INL’s Human System Simulation Laboratory, three-dimensional modeling to visualize control board changes.

3D Modeling↗

Use of XRF to characterize pre-Hanford orchards in the 100-OL-1 operable unit - 15717

Prior to 1943, Hanford site included several small towns with approximately 5,000 acres of orchards; at the time lead arsenate (PbHAsO{sub 4}) was the most commonly used pesticide. High concentration of lead and arsenic have been recorded where trees and stumps are still visible. Pre-Hanford orchards have been designated as 100-OL-1 Operable Unit. An Optimization study evaluated optimal counting time and position of the XRF from soils collected at the site. A Pilot Study included the evaluation of a field portable x-ray fluorescence (XRF) analyzer determining if performance results meet quality assurance criteria for cleanup. XRF has only previously been used as a screening tool. Four Decision Units (DUs) are to be analyzed: Ol-14. OL-32. OL-IU6-4 and OL-FR2-1. The DUs vary in size and have had distinct historic activities; such as 46.4 acres OL-14 having a military camp in the 1950's unlike OL-FR2-1 having been disturbed as it is near the F area reactor. Together the DUs provide an adequate representation of the Operable Unit. Screening criteria for lead (250 mg/kg) and arsenic (20 mg/kg). Six samples were collected ranging above, at, and below the screening criteria of 250 mg/kg for Pb and 20 mg/kg for As at the Decision Units OL-14 and OL-IU6-4, and labeled respectively. Samples were hand sieved, homogenized and placed in sample cups. Three replicates were prepared for each sample. Each sample cup was analyzed 3 times for 30 sec. A Standard Reference Material (SRM) was analyzed after every 20 readings. Three samples were selected for 15, 30, 45, 60, 90, 120, 150 and 180 second fixed and variable analysis. Two transects at OL-14, and one at OL-IU6-4 were created by selecting locations 90. around ground zero at distances of 0.5, 1, 2, 4, 8 and 12 feet (16 ft for OL-14). Locations were scanned in triplicate for 60 seconds each. 4 Decision Units spanning roughly 370 acres were chosen to represent 100-OL-1 Operable Unit. 40 locations within each DU were selected using Visual Sample Plan (VSP) with a random start and systematic grid pattern. Each location would be analyzed with 3 replicates and a 60 second count time. The Standard Reference Material (SRM) and blank are analyzed after every 20 counts to ensure accuracy. Data is extracted from XRF to be implemented in GIS for visual representation of site with 1943 and 2013 aerial imagery. Discussion/Conclusion: - XRF provided a good indication of precision and accuracy relative to ICP with a linear correlation R{sup 2} value higher than anticipated at .9735; - MDL proved the detection limit is significantly lower than the screening criteria; - When comparing results from the first 40 locations of OL-14 to the total 80 locations of OL-14, the same variability was seen; - We expect high concentrations of Pb and As to be where past orchards are present though this does not occur as all sites. Significance: - XRF is competent for decision making as values fall within ±20% ICP data; - The highest concentrations are not where expected, which may be an issue for sites outside of Hanford that have had more development; - The size of the DU does not affect the number of samples measured. Future Work: - Verification and validation of the XRF Data (QA/QC); - Revise conceptual site model; - Statistical evaluations to investigate: Estimation of variability in surface soils, appropriate size for DU, and sample size per DU; - Coordinating sample results through CORE; - Displaying sample results in PHOENIX (GIS tool)

12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗

An optimization-based web application for synthesis and analysis of biomass-to-fuel strategies: An optimization-based web application for synthesis and analysis of biomass-to-fuel strategies

We develop an optimization-based web application for assessing biomass-to-fuels strategies based on the Biomass Utilization Superstructure (BUS) framework. This web application allows researchers with limited knowledge of optimization to assess different technologies employed at different strategies and identify the major cost drivers. The user must only provide the necessary parameters and create an optimization run after identifying the question to be addressed and the assessment metric. The web application generates visual representations of the results once the optimal solution is obtained. Finally, we demonstrate the applicability of the web application through an example.

09 BIOMASS FUELS↗

Atomic Movies of Laser-Induced Structural and Phase Transformations from Molecular Dynamics Simulations

Molecular dynamics (MD) simulations of laser-materials interactions are playing an important role in investigation of complex and highly non-equilibrium processes involved in short pulse laser processing and surface modification. This role is defined by the ability of MD simulations to reveal in-depth information on the structural and phase transformations induced by the laser excitation and, at the same time, to provide clear visual representations, or “atomic movies,” of laser-induced dynamic processes. This chapter provides a brief overview of recent progress in the description of laser coupling and relaxation of photo-excited states in metals, semiconductors, insulators and molecular systems within the general framework of the classical MD technique and presents several examples of MD simulations of laser melting, generation of crystal defects, photomechanical spallation, explosive boiling and molecular entrainment in laser ablation. Possible directions of future progress in atomistic modeling of laser-materials interactions and the potential role of MD simulations in the design of an integrated multiscale computational model capable of accounting for interrelations between processes occurring at different time- and length-scales are discussed.

Classical Molecular Dynamic↗

Interface Metaphors for Interactive Machine Learning

To promote more interactive and dynamic machine learn- ing, we revisit the notion of user-interface metaphors. User-interface metaphors provide intuitive constructs for supporting user needs through interface design elements. A user-interface metaphor provides a visual or action pattern that leverages a user’s knowledge of another domain. Metaphors suggest both the visual representations that should be used in a display as well as the interactions that should be afforded to the user. We argue that user-interface metaphors can also offer a method of extracting interaction-based user feedback for use in machine learning. Metaphors offer indirect, context-based information that can be used in addition to explicit user inputs, such as user-provided labels. Implicit information from user interactions with metaphors can augment explicit user input for active learning paradigms. Or it might be leveraged in systems where explicit user inputs are more challenging to obtain. Each interaction with the metaphor provides an opportunity to gather data and learn. We argue this approach is especially important in streaming applications, where we desire machine learning systems that can adapt to dynamic, changing data.

Interactive machine learning↗