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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 361 records · Page 20

Enhancing Biopreparedness through a Model System to Understand the Molecular Mechanisms that Lead to Pathogenesis and Disease Transmission: NW-BRaVE

The science of biopreparedness to counter biological threats hinges on understanding the fundamental principles and molecular mechanisms that lead to pathogenesis and disease transmission. Our vision to address this challenge is to create a powerful and user-friendly platform to elucidate the fundamental principles of how molecular interactions drive pathogen-host relationships and host shifts. We will enable groundbreaking discoveries by integrating a wide range of structural, genomics, proteomics, and other advanced omics measurements, along with evolutionary and artificial intelligence predictions. To make sure the system is applicable to real-world problems, we will develop it in the context of a tractable model system, the small, abundant, and accessible photosynthetic cyanobacteria and their constantly co-adapting viral pathogens, cyanophages. This model will maintain the system’s applicability to real-world problems and techniques, but the overall focus will be on elucidating general principles of detecting, assessing, and surveilling molecular interaction, adaptation, and coevolution that are system agnostic and therefore extensible to other viral-host interactions. Our overall objectives are to (1) identify the molecular complexes that comprise the cyanobacteria redox macromolecular subsystem and how they dynamically change with bacteriophage infection in situ, using cryo-electron tomography; (2) profile regulatory changes during infection using proteomics, multiomics, and experimental validation, and integrate the data with in situ structures; (3) use genomics and metagenomics to determine environmental and population factors across time scales that impact the interactions between marine cyanobacteria and their cyanophage parasites, predicting the evolutionary origins of in situ structural and functional interactions, convergence and coevolution; and (4) develop a data integration and transformation platform that facilitates the integration of in situ, proteomic, and evolutionary measurements of molecular interactions to surveil diverse hosts and parasites in various environmental contexts. These objectives address Focus Area 2 Reveal Molecular Interactions Across Biological Scales for Design of Targeted Interventions. Our powerful and user-friendly platform will enhance connections between the often-siloed fields of structure, molecular phenotype, and evolutionary genomics that are key to biopreparedness, but in need of integration (Figure 1). We will build an integrated navigation tool to facilitate the effective use of globally distributed experimental data for integrated analysis and predictive modeling. The project will develop, implement, and test a platform to assess host-pathogen molecular interactions, adaptation to hosts and host shifts, and coevolution between hosts and pathogens, successfully impacting the research community by revolutionizing abilities to study any host-pathogen interaction, encourage diverse community contributions, and gain fundamental insights into how proteins adapt to new contexts. This ability will be critical for designing early interventions to address future threats. We will build surveillance training capability, aiming for a fair and equitable response to future pandemics and biothreats.

59 BASIC BIOLOGICAL SCIENCES↗

The X-ray spectra of the Vela and Puppis supernova remnants and the shock-wave model of supernova remnants

The structure and spectrum of the Vela and Puppis supernova remnants (SNRs) were observed in soft (0.1 to 1.5 keV) X rays from a rocket. The spectral data of both objects below 1.5 keV are consistent with thermal radiation from a hot plasma and are not consistent with a simple power-law function. Fitting the data to a Tucker-Koren model results in values of T = (4.3 plus or minus 0.3) x 1,000,000 K for Vela and T = (7 plus or minus 1) x 1,000,000 K for Puppis. The present data, earlier data from the Cygnus Loop, and results on Cas A and Tycho reported by others are considered within the context of a simple model in which X rays are thermally produced as a result of a shock wave expanding into the interstellar medium. X-ray data on the temperature, intrinsic diameter, and intrinsic luminosity of the five SNRs are used to compute the age, energy release, and initial interstellar density for each one. From measurements of X-ray absorption along the line of sight, and also from shock-wave model interpretations of temperature-diameter-luminosity relations, it is concluded that the average density of interstellar material is about 0.1 per cu cm between the sun and the nearest X-ray emitting SNR, Vela.

Gorenstein, P.↗

White paper on light sterile neutrino searches and related phenomenology

This white paper provides a comprehensive review of our present understanding of experimental neutrino anomalies that remain unresolved, charting the progress achieved over the last decade at the experimental and phenomenological level, and sets the stage for future programmatic prospects in addressing those anomalies. It is purposed to serve as a guiding and motivational "encyclopedic" reference, with emphasis on needs and options for future exploration that may lead to the ultimate resolution of the anomalies. We see the main experimental, analysis, and theory-driven thrusts that will be essential to achieving this goal being: 1) Cover all anomaly sectors -- given the unresolved nature of all four canonical anomalies, it is imperative to support all pillars of a diverse experimental portfolio, source, reactor, decay-at-rest, decay-in-flight, and other methods/sources, to provide complementary probes of and increased precision for new physics explanations; 2) Pursue diverse signatures -- it is imperative that experiments make design and analysis choices that maximize sensitivity to as broad an array of these potential new physics signatures as possible; 3) Deepen theoretical engagement -- priority in the theory community should be placed on development of standard and beyond standard models relevant to all four short-baseline anomalies and the development of tools for efficient tests of these models with existing and future experimental datasets; 4) Openly share data -- Fluid communication between the experimental and theory communities will be required, which implies that both experimental data releases and theoretical calculations should be publicly available; and 5) Apply robust analysis techniques -- Appropriate statistical treatment is crucial to assess the compatibility of data sets within the context of any given model.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Conservation equations and physical models for hypersonic air flows in thermal and chemical nonequilibrium

The conservation equations for simulating hypersonic flows in thermal and chemical nonequilibrium and details of the associated physical models are presented. These details include the curve fits used for defining thermodynamic properties of the 11 species air model, curve fits for collision cross sections, expressions for transport properties, the chemical kinetics models, and the vibrational and electronic energy relaxation models. The expressions are formulated in the context of either a two or three temperature model. Greater emphasis is placed on the two temperature model in which it is assumed that the translational and rotational energy models are in equilibrium at the translational temperature, T, and the vibrational, electronic, and electron translational energy modes are in equilibrium at the vibrational temperature, T sub v. The eigenvalues and eigenvectors associated with the Jacobian of the flux vector are also presented in order to accommodate the upwind based numerical solutions of the complete equation set.

Peter A. Gnoffo↗

Limits on Large Extra Dimensions Based on Observations of Neutron Stars with the Fermi-LAT

We present limits for the compactification scale in the theory of Large Extra Dimensions (LED) proposed by Arkani-Hamed, Dimopoulos, and Dvali. We use 11 months of data from the Fermi Large Area Telescope (Fermi-LAT) to set gamma ray flux limits for 6 gamma-ray faint neutron stars (NS). To set limits on LED we use the model of Hannestad and Raffelt (HR) that calculates the Kaluza-Klein (KK) graviton production in supernova cores and the large fraction subsequently gravitationally bound around the resulting NS. The predicted decay of the bound KK gravitons to should contribute to the flux from NSs. Considering 2 to 7 extra dimensions of the same size in the context of the HR model, we use Monte Carlo techniques to calculate the expected differential flux of gamma-rays arising from these KK gravitons, including the effects of the age of the NS, graviton orbit, and absorption of gamma-rays in the magnetosphere of the NS. We compare our Monte Carlo-based differential flux to the experimental differential flux using maximum likelihood techniques to obtain our limits on LED. Our limits are more restrictive than past EGRET-based optimistic limits that do not include these important corrections. Additionally, our limits are more stringent than LHC based limits for 3 or fewer LED, and comparable for 4 LED. We conclude that if the effective Planck scale is around a TeV, then for 2 or 3 LED the compactification topology must be more complicated than a torus.

Ferrara, E. C.↗

Analysis of gamma-ray burst spectra with cyclotron lines

Motivated by the recent developments in the cyclotron resonance upscattering of soft photons or CUSP model of Gamma Ray Burst (GBR) continuum spectra, we revisit a select database of GRBs with credible cyclotron absorption features. We measure the break energy of the continuum, the slope below the break and deduce the soft photon energy or the electron beam Lorentz factor cutoff. We study the correlation (or lack of) between various parameters in the context of the CUSP model. One surprise result is that there appears to be marginal correlation between the break energy and the spectral index below the break.

Kargatis, Vincent↗

Explaining word embeddings with perfect fidelity: a case study in predicting research impact

The best-performing approaches for scholarly document quality prediction are based on embedding models. In addition to their performance when used in classifiers, embedding models can also provide predictions even for words that were not contained in the labelled training data for the classification model, which is important in the context of the ever-evolving research terminology. Although model-agnostic explanation methods, such as Local interpretable model-agnostic explanations, can be applied to explain machine learning classifiers trained on embedding models, these produce results with questionable correspondence to the model. We introduce a new feature importance method, Self-Model Entities Rated (SMER), for logistic regression-based classification models trained on word embeddings. We show that SMER has theoretically perfect fidelity with the explained model, as the average of logits of SMER scores for individual words (SMER explanation) exactly corresponds to the logit of the prediction of the explained model. Quantitative and qualitative evaluation is performed through five diverse experiments conducted on 50,000 research articles (papers) from the CORD-19 corpus. In conclusion, through an AOPC curve analysis, we experimentally demonstrate that SMER produces better explanations than LIME, SHAP and global tree surrogates.

Coarse-grained models↗

A parametric analysis of performance characteristics of satellite-borne multiple-beam antennas

An analytical and empirical model is presented for parametric study of multiple beam antenna frequency reuse capacity and interbeam isolation. Two types of reflector antennas, the axisymmetric parabolic and the offset-parabolic reflectors, are utilized to demonstrate the model. The parameters of the model are introduced and their limitations are discussed in the context of parabolic reflector antennas. The model, however, is not restricted to analysis of reflector antenna performance. Results of the analyses are covered in two tables. The model parameters, objectives, and descriptions are given, multiple-beam antenna frequency reuse capacity and interbeam isolation analysis of the two types of reflectors are discussed as well as future developments of the program model.

Salmasi, A. B.↗

Lower-Stratospheric Tracer Trends and Variability from Reanalyses

Previous studies have robustly identified a decrease since 1998 in lower stratospheric ozone in the Northern Hemisphere (NH). While this ozone decrease is qualitatively explained as resulting from changes in the large-scale circulation, there is not yet a quantitative mechanistic explanation of these changes. Here we explore the drivers of recent ozone changes using two different configurations of the Goddard Earth Observing System (GEOS) general circulation model. The first configuration of GEOS includes a full chemistry module and is constrained with meteorological fields from the MERRA-2 reanalysis. This configuration (M2GMI) is used to analyze an idealized tracer that covaries closely with ozone on interannual and decadal timescales, revealing that recent ozone decreases in the NH subtropics are associated with a poleward expansion of upwelling in the NH LS, with reduced (enhanced) downwelling over northern subtropics (midlatitudes). The second configuration of GEOS is a free-running version of the GEOS Chemistry-Climate Model (CCM) that is used to perform a ten-member ensemble of free-running simulations. Comparisons of the two configurations reveal that, while the free-running model can produce negative ozone changes in the NH LS, the magnitude of these changes is significantly weaker, relative to both M2GMI and MERRA-2; moreover, these weaker ozone decreases are consistent with weaker simulated changes in the residual circulation. Finally, we examine the GEOS model results in the broader context of the hindcast simulations performed as part of Phase 1 of the Chemistry Climate Modeling Initiative. We show that the majority of the free-running simulations considered here also exhibit weaker long-term residual circulation changes, compared to reanalyses.

Wargan, Kris↗

Mechanisms Linked to Recent Ozone Decreases in the Northern Hemisphere Lower Stratosphere

Previous studies have robustly identified a decrease since 1998 in lower stratospheric (LS) ozone in the Northern Hemisphere (NH). While this ozone decrease is qualitatively explained as resulting from changes in the large‐scale circulation, there is not yet a quantitative mechanistic explanation of these changes. Here we explore the drivers of recent ozone changes using two different configurations of the Goddard Earth Observing System (GEOS) general circulation model. The first configuration of GEOS includes a full chemistry module and is constrained with meteorological fields from the Modern‐Era Retrospective analysis for Research and Applications, Version 2 (MERRA‐2). This configuration (M2GMI) is used to analyze an idealized tracer that covaries closely with ozone on interannual and decadal timescales, revealing that recent ozone decreases in the NH subtropics are associated with a poleward expansion of upwelling in the NH LS, with reduced (enhanced) downwelling over northern subtropics (midlatitudes). The second configuration of GEOS is a free‐running version of the GEOS Chemistry‐Climate Model (CCM) that is used to perform a ten‐member ensemble of free‐running simulations. Comparisons of the two configurations reveal that, while the free‐running model can produce negative ozone changes in the NH LS, the magnitude of these changes is significantly weaker, relative to both M2GMI and MERRA‐2; moreover, these weaker ozone decreases are consistent with weaker simulated changes in the residual circulation. Finally, we examine the GEOS model results in the broader context of the hindcast simulations performed as part of Phase 1 of the Chemistry Climate Modeling Initiative. We show that the majority of the free‐running simulations considered here also exhibit weaker long‐term residual circulation changes, compared to reanalyses.

Ozone↗

Gallery of soft modes: Theory and experiment at a ferromagnetic quantum phase transition

We examine the low-energy excitations in the vicinity of the quantum critical point in LiHoF4, a physical realization of the Transverse Field Ising Model, focusing on the long-range fluctuations which soften to zero energy at the ferromagnetic quantum phase transition. Microwave spectroscopy in tunable loop-gap resonator structures identifies and characterizes the electronuclear soft mode and higher-energy electronuclear states as a function of frequency and magnetic fields applied transverse and parallel to the Ising axis. These are understood in the context of a theoretical model of a soft electronuclear mode that interacts with soft photons as well as soft phonons. We identify competing infrared divergences at the quantum critical point, coming from the photons and the electronuclear soft mode. It is an incomplete cancellation of these divergences that leads to the muted but distinct signatures observed in the experiments. The application of a longitudinal magnetic field gaps the soft mode. As a result, measurements well away from the quantum critical point reveal a set of "Walker'' modes associated with ferromagnetic domain dynamics.

Dipolar interaction↗

The possibility of steady state nonionization equilibrium conditions in soft X-ray flare plasmas

The possibility of the existence in soft X-ray flare plasmas of conditions that result in a steady state departure of ion abundances from ionization equilibrium values is considered. The observed flare plasma is assumed to be a result of many small 'elementary bursts' that occur on time scales comparable to the ionization and recombination times of highly ionized atoms of iron and calcium. Specific models are adopted, the time-dependent equations for ion abundances are solved numerically, and X-ray line intensities and line ratios are computed and averaged over the effective time of a single burst. The computed results are compared to observed variations for a number of different line ratios. Although the behavior of certain line ratios can be explained in the context of the burst models considered in this paper, the behavior of the set of all the available line ratios cannot be explained in this manner. The observed departures of line ratios from equilibrium values that can be explained in terms of a burst scenario can also be accounted for by uncertainties in the atomic physics.

Doschek, G. A.↗

On fast X-ray rotators with long-term periodicities

The support of previous SAS 3 spacecraft observations by new data gathered by the Monitor Proportional Counter aboard the HEAO 2 spacecraft indicates that the pulse period history of the 13.5 sec-pulsing X-ray source LMC X-4 is consistent with standard accretion and torque models only if LMC X-4 is a fast rotator for which the accretion torques nearly cancel. This result leads to a neutron star magnetic field strength estimate of about 1.2 x 10 to the 13th G. Strong evidence is noted for Her X-1's status as a fast rotator, while SMC X-1 is probably an intermediate-to-fast rotator. In the context of slaved disk models for these objects, it is noted that the precession periods expected for the companion stars are significantly longer than the observed 1-2 month time scales; slaved disk models are thereby undermined.

Naranan, S.↗

Power spectra of quasi-periodic oscillations in luminous X-ray stars

A variety of partial random processes are considered in order to study the effects on the power-density spectrum of several physical phenomena that may occur in the beat-frequency modulated accretion (BFMA) model of QPOs. The relevant physical properties of BFMA model are summarized, and the class of random processes used to represent the X-ray intensity time series predicted by the model are introduced. The dependence of the power-density spectrum on pulse shape is discussed. Pulse-lifetime and orbital-frequency distributions are introduced, illustrating how these affect the power-density spectrum. The effect of nonuniform initial-pulse phase distributions and of nonuniform pulse-time distributions are considered. The effects of a particular type of pulse-to-pulse correlation that may be natural in the context of the BFMA model and that greatly increases the power of the oscillations relative to that in the red noise is analyzed.

Shibazaki, N.↗

New giant planet beyond the snow line for an extended MOA exoplanet microlens sample

Characterizing a planet detected by microlensing is hard if the planetary signal is weak or the lens-source relative trajectory is far from caustics. However, statistical analyses of planet demography must include those planets to accurately determine occurrence rates. As part of a systematic modelling effort in the context of a >10-yr retrospective analysis of MOA’s survey observations to build an extended MOA statistical sample, we analyse the light curve of the planetary microlensing event MOA-2014-BLG-472. This event provides weak constraints on the physical parameters of the lens, as a result of a planetary anomaly occurring at low magnification in the light curve. We use a Bayesian analysis to estimate the properties of the planet, based on a refined Galactic model and the assumption that all Milky Way’s stars have an equal planet-hosting probability. We find that a lens consisting of a 1.9(+2.2,−1.2)M(J) giant planet orbiting a 0.31(+0.36,−0.19)Mꙩ host at a projected separation of 0.75±0.24au is consistent with the observations and is most likely, based on the Galactic priors. The lens most probably lies in the Galactic bulge, at 7.2(+0.6,−1.7)kpc from Earth. The accurate measurement of the measured planet-to-host star mass ratio will be included in the next statistical analysis of cold planet demography detected by microlensing.

Clément Ranc↗

Ion partitioning in the hot Io torus - The influence of S2 outgassing

An alternative time-independent model of the ion partitioning in the hot Io torus is proposed which introduces the ratio of sulfur to oxygen in the neutral source as a free parameter. Measurements of the ion abundances in the torus plasma are presented and discussed, noting some ambiguities and identifying the features that are well established. Physical processes important to the understanding of the ion partitioning calculation are reviewed. The results of the model are discussed in the context of observational constraints, and spectroscopic constraints are discussed. It is concluded that a bimodal source model, together with a small percentage of hot electrons and a relatively short diffusion time scale, can account for the principal observational features without invoking significant time variability. In particular, the O III deficiency observed in 1981 can be obtained in a model that produces other aspects of the torus ion partitioning measured during the Voyager 1 encounter.

Moreno, M. A.↗

Consequences of the Breakout Model for Particle Acceleration in CMEs and Flares

The largest and most efficient particle accelerators in the solar system are the giant events consisting of a fast coronal mass ejection (CME) and an intense X-class solar flare. Both flares and CMEs can produce l0(exp 32) ergs or more in nonthermal particles. Two general processes are believed to be responsible: particle acceleration at the strong shock ahead of the CME, and reconnection-driven acceleration in the flare current sheet. Although shock acceleration is relatively well understood, the mechanism by which flare reconnection produces nonthermal particles is still an issue of great debate. We address the question of CME/flare particle acceleration in the context of the breakout model using 2.5D MHD simulations with adaptive mesh refinement (AMR). The AMR capability allows us to achieve ultra-high numerical resolution and, thereby, determine the detailed structure and dynamics of the flare reconnection region. Furthermore, we employ newly developed numerical analysis tools for identifying and characterizing magnetic nulls, so that we can quantify accurately the number and location of magnetic islands during reconnection. Our calculations show that flare reconnection is dominated by the formation of magnetic islands. In agreement with many other studies, we find that the number of islands scales with the effective Lundquist number. This result supports the recent work by Drake and co-workers that postulates particle acceleration by magnetic islands. On the other hand, our calculations also show that the flare reconnection region is populated by numerous shocks and other indicators of strong turbulence, which can also accelerate particles. We discuss the implications of our calculations for the flare particle acceleration mechanism and for observational tests of the models.

Antiochos, S. K.↗

Hard Burst Emission from the Soft Gamma Repeater SGR 1900+14

We present evidence for burst emission from SGR 1900+14 with a power-law high energy spectrum extending beyond 500 kev. Unlike previous detections of high energy photons during bursts from SGRS, these emissions are not associated with high-luminosity burst intervals. Not only is the emission hard, but the spectra are better fit by Band's GRB function rather than by the traditional optically-thin thermal bremsstrahlung model. We find that the spectral evolution within these hard events obeys a hardness/intensity anti-correlation. Temporally, these events are distinct from typical SGR burst emissions in that they are longer (about 1 s) and have relatively smooth profiles. Despite a difference in peak luminosity of > 1E+ll between these bursts from SGR 1900+14 and cosmological GRBS, there are striking temporal and spectral similarities between the two kinds of bursts, aside from spectral evolution. We outline an interpretation of these events in the context of the magnetar model.

Duncan, Robert D.↗