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At least 379 records · Page 21

Integrated System and Application Continuous Performance Monitoring and Analysis Capability (Final)

Scientific applications run on high-performance computing (HPC) systems are critical for many national security missions within Sandia and the NNSA complex. However, these applications often face performance degradation and even failures that are challenging to diagnose. To provide unprecedented insight into these issues, the HPC Development, HPC Systems, Computational Science, and Plasma Theory & Simulation departments at Sandia crafted and completed their FY21 ASC Level 2 milestone entitled "Integrated System and Application Continuous Performance Monitoring and Analysis Capability." The milestone created a novel integrated HPC system and application monitoring and analysis capability by extending Sandia’s Kokkos application portability framework, Lightweight Distributed Metric Service (LDMS) monitoring tool, and scalable storage, analysis, and visualization pipeline. The extensions to Kokkos and LDMS enable collection and storage of application data during run time, as it is generated, with negligible overhead. This data is combined with HPC system data within the extended analysis pipeline to present relevant visualizations of derived system and application metrics that can be viewed at run time or post run. This new capability was evaluated using several week-long, 290-node runs of Sandia’s ElectroMagnetic Plasma In Realistic Environments (EMPIRE) modeling and design tool and resulted in 1TB of application data and 50TB of system data. EMPIRE developers remarked this capability was incredibly helpful for quickly assessing application health and performance alongside system state. In short, this milestone work built the foundation for expansive HPC system and application data collection, storage, analysis, visualization, and feedback framework that will increase total scientific output of Sandia’s HPC users.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Interactive automated Bragg peak identification with 3D neutron scattering data

Neutron scattering experiments have undergone significant technological development through large area detectors with concurrent enhancements in neutron transport and electronic functionality. Data collected for neutron events include detector pixel location in 3D, time and associated metadata, such as, sample orientation, neutron wavelength, and environmental conditions. RadiaSoft and Oak Ridge National Laboratory personnel are considering single-crystal diffraction data from the TOPAZ instrument. We are leveraging a new method for rapid, interactive analysis of neutron data using NVIDIA’s IndeX 3D volumetric visualization framework. We have implemented machine learning techniques to automatically identify Bragg peaks and separate them from diffuse backgrounds and analyze the crystalline lattice parameters for further analysis. The implementation of automatic peak identification into IndeX allows scientists to visualize and analyze data in real-time. Our methods include a robust comparison with current analysis techniques which show improvement in a variety of aspects. These improvements will be incorporated into IndeX for visualization to allow scientists an interactive tool for crystal analysis.

Kilpatrick, Matthew↗

Tools for Analysis and Visualization of Large Time-Varying CFD Data Sets

In the second year, we continued to built upon and improve our scanline-based direct volume renderer that we developed in the first year of this grant. This extremely general rendering approach can handle regular or irregular grids, including overlapping multiple grids, and polygon mesh surfaces. It runs in parallel on multi-processors. It can also be used in conjunction with a k-d tree hierarchy, where approximate models and error terms are stored in the nodes of the tree, and approximate fast renderings can be created. We have extended our software to handle time-varying data where the data changes but the grid does not. We are now working on extending it to handle more general time-varying data. We have also developed a new extension of our direct volume renderer that uses automatic decimation of the 3D grid, as opposed to an explicit hierarchy. We explored this alternative approach as being more appropriate for very large data sets, where the extra expense of a tree may be unacceptable. We also describe a new approach to direct volume rendering using hardware 3D textures and incorporates lighting effects. Volume rendering using hardware 3D textures is extremely fast, and machines capable of using this technique are becoming more moderately priced. While this technique, at present, is limited to use with regular grids, we are pursuing possible algorithms extending the approach to more general grid types. We have also begun to explore a new method for determining the accuracy of approximate models based on the light field method described at ACM SIGGRAPH '96. In our initial implementation, we automatically image the volume from 32 equi-distant positions on the surface of an enclosing tessellated sphere. We then calculate differences between these images under different conditions of volume approximation or decimation. We are studying whether this will give a quantitative measure of the effects of approximation. We have created new tools for exploring the differences between images produced by various rendering methods. Images created by our software can be stored in the SGI RGB format. Our idtools software reads in pair of images and compares them using various metrics. The differences of the images using the RGB, HSV, and HSL color models can be calculated and shown. We can also calculate the auto-correlation function and the Fourier transform of the image and image differences. We will explore how these image differences compare in order to find useful metrics for quantifying the success of various visualization approaches. In general, progress was consistent with our research plan for the second year of the grant.

Wilhelms, Jane↗

National Climate Assessment - Land Data Assimilation System (NCA-LDAS) Data and Services at NASA GES DISC

The National Climate Assessment-Land Data Assimilation System (NCA-LDAS) is an Integrated Terrestrial Water Analysis, and is one of NASAs contributions to the NCA of the United States. The NCA-LDAS has undergone extensive development, including multi-variate assimilation of remotely-sensed water states and anomalies as well as evaluation and verification studies, led by the Goddard Space Flight Centers Hydrological Sciences Laboratory (HSL). The resulting NCA-LDAS data have recently been released to the general public and include those from the Noah land-surface model (LSM) version 3.3 (Noah-3.3) and the Catchment LSM version Fortuna-2.5 (CLSM-F2.5). Standard LSM output variables including soil moistures temperatures, surface fluxes, snow cover depth, groundwater, and runoff are provided, as well as streamflow using a river routing system. The NCA-LDAS data are archived at and distributed by the NASA Goddard Earth Sciences Data and Information Services Center (GES DISC). The data can be accessed via HTTP, OPeNDAP, Mirador search and download, and NASA Earth data Search. To further facilitate access and use, the NCA-LDAS data are integrated into the NASA Giovanni, for quick visualization and analysis, and into the Data Rods system, for retrieval of time series of long time periods. The temporal and spatial resolutions of the NCA-LDAS data are, respectively, daily-averages and 0.125x0.125 degree, covering North America (25N 53N; 125W 67W) and the period January 1979 to December 2015. The data files are in self-describing, machine-independent, CF-compliant netCDF-4 format.

data assimiliation↗

The Weather Analysis Display (WAND) Tool: Developing a Meteorological Data Display Tool for Situational Awareness During Day-Of-Launch of Space Launch Vehicles Using Python

Atmospheric conditions are an important driver in the design and operation of space launch vehicles. The Profile Envision and Splicing Tool (PRESTO) was developed by NASA’s Marshall Space Flight Center (MSFC) Natural Environments Branch (NE) to generate vertically complete atmospheric profiles from various data sources at NASA’s Kennedy Space Center (KSC), co-located on the United States Air Force (USAF) Eastern Range (ER), for NASA’s Space Launch System (SLS) day-of-launch (DOL) loads and trajectory analysis. PRESTO was designed solely to generate a vertically complete atmospheric profile (Orcutt et al., 2017). However, NE has also been tasked to provide a quality assessment of meteorological data examined on DOL, which goes beyond PRESTO’s utility. Thus, NE developed the Weather Analysis Display (WAND) to visualize data from all available observation systems in conjunction with climatological databases. WAND can display data from various sources in multiple ways, including Skew-T Log-P plots, time-height cross sections, and time series. WAND was developed in Python 3 taking advantage of common packages, such as NumPy for data handling, SciPy for mathematical functions, Matplotlib for data visualization, and Tkinter for the execution of the Graphical User Interface (GUI).

Orcutt, John M.↗

Another Set of Python Tools for Visualizing and Manipulating Small-Angle Neutron Scattering Data: Descriptions and Examples

The GP-SANS, Bio-SANS and EQ-SANS instruments at ORNL utilize drtsans for data reduction. drtsans is built on Python, and it can be run using python scripts and Jupyter notebooks. The flexibility afforded by Python makes it possible to incorporate additional actions into the scripts used for data reduction, such as analysis and visualization. Here, a new set of tools for visualizing and manipulating SANS data that can be incorporated into the data reduction scripts for the ORNL SANS instruments, or employed during post–processing, is presented that expands the capabilities of the two previously-released tool sets.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

On evaluating the accuracy of SAR sea-ice classification using multifrequency polarimetric AIRSAR data

We investigate how multifrequency and polarimetric synthetic aperture radar (SAR) imagery enhances present capability to discriminate different ice conditions in single-frequency, single-polarization satellite SAR data. Frequencies considered are C- (lambda = 5.6cm), L- (lambda = 24cm) and P- (lambda = 68cm) band. Radar backscatter characteristics of six radiometrically and polarimetrically distinct ice types are selected from a cluster analysis of the multifrequency polarimetric SAR data and used to classify SAR images. Validation of these ice conditions is based on information provided by aerial photos, weather and ice surface measurements acquired at an ice camp, together with airborne passive microwave imagery, and visual analysis of the SAR data. The six identified sea-ice types are: (1) multiyear sea-ice; (2) compressed first year ice; (3) first year rubble and ridges; (4) first year rough ice; (5) first year smooth ice; and (6) thin ice. Open water is absent in all analyzed data. Classification of the SAR imagery into those six ice types is performed using a Bayesian Maximum A Posteriori classifier. Two complete scenes acquired at different dates in different locations are classified. The scenes were chosen such that they are representative of typical ice conditions in the Beaufort Sea in March 1988 and because ancillary information is available for validating the segmentation of various ice surface conditions.

Drinkwater, Mark R.↗

RE Data Explorer: Informing Variable Renewable Energy Grid Integration for Low Emission Development

The RE Data Explorer, developed by the National Renewable Energy Laboratory, is an innovative web-based analysis tool that utilizes geospatial and spatiotemporal renewable energy data to visualize, execute, and support analysis of renewable energy potential under various user-defined scenarios. This analysis can inform high-level prospecting, integrated planning, and policy making to enable low emission development.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

Online Visualization and Analysis of NASA Satellite-Based Global and Regional Precipitation Products Through Giovanni

Observational data are essential for Earth science research and applications. Traditional ground-based observations suffer from many limitations (e.g. costly deployment). As a result, data are often sparse and inconsistent, especially over vast oceans that cover nearly 71% of the Earth's surface, and for remote continents. Precipitation is one of the important physical parameters in the global hydrological cycle and other disciplines. Each year, severe floods and droughts happen in different parts of the world and cause significant damage to the economy, as well as human casualties (e.g. Hurricane Katrina, the Dust Bowl). Accurate and timely precipitation observations and predictions are important for research and applications. However, ground-based precipitation observations are quite limited, especially in remote and mountainous regions. Since the satellite era began, satellite-based precipitation products have gained popularity in Earth science research, applications, and education. Accessing satellite products can be a daunting task to many users, especially those who do not have prior experience or knowledge with satellite data. Recognizing this obstacle, the NASA Goddard Earth Sciences and Data and Information Services Center (GES DISC), home to data archives for the NASA-JAXA Tropical Rainfall Measuring Mission (TRMM) and Global Precipitation Measurement (GPM), has developed data services including an online visualization and analysis tool, Giovanni (the Geospatial Interactive Online Visualization ANd aNalysis Infrastructure), enabling users at different levels to access, explore, and evaluate NASA satellite-based data products without downloading either data and software, or requiring coding. Currently, global and regional precipitation products from different satellite missions (TRMM, GPM) and projects (e.g. the Modern Era Retrospective-analysis for Research and Applications Version 2 (MERRA-2), and the North American Land Data Assimilation System (NLDAS)), ranging from half-hourly to monthly temporal resolution, are available in Giovanni. There are over 1900 variables in Giovanni, covering measurements in precipitation, hydrology, atmospheric dynamics, atmospheric chemistry, etc. In this poster presentation, we will provide a live demonstration of Giovanni and its latest development, including precipitation-related variables, and new basic features such as polar projections. The session will also provide a Q&A opportunity for attendees.

Giovanni↗

Grid Data Crossing Platform (GriD-Xing)

This project is to develop a data management and analytics platform called Grid Data Crossing (GriD-Xing) that integrates data processing, storage, analysis, and visualization functionalities for users at industry (e.g., EMS and DMS) and universities. It intends to increase the applicability of large set of multi-source data (e.g., SCADA, PMU, μPMU, AMI, inverter, load/DER forecasting, and cyber data) and eventually improve the resilience, reliability, and security of critical energy infrastructure. GriD-Xing also intends to be a research platform to identify the usefulness of large multi-source data via case studies of interest to industry (e.g., 2011 southwest cold weather and 2016 Blue Cut fire events). In the first year, the team focused on the development and demonstration of large multi-source data (e.g., PMU, μPMU, SCADA, AMI, and cyber data) processing, storage, and analysis. Specifically, the team designed GriD-Xing framework in functional and structural aspects, developed GriD-Xing algorithms for large multi-source grid data processing, storage, and analysis, and finally demonstrated GriD-Xing prototype algorithms performance through a series of tests and case studies using real-world and simulation data.

24 POWER TRANSMISSION AND DISTRIBUTION↗

NASA Giovanni Portals for NLDAS/GLDAS Online Visualization, Analysis, and Intercomparison

The North American Land Data Assimilation System (NLDAS) and Global Land Data Assimilation System (GLDAS) are generating a series of land surface forcing (e.g., precipitation, surface meteorology, and radiation), state (e.g., soil moisture and temperature, and snow), and flux (e.g., evaporation and sensible heat flux) products, simulated by several land surface models. To date, NLDAS and GLDAS have generated more than 30 (1979 - present) and 60 (1948 - present) years of data, respectively. To further facilitate data accessibility and utilization, three new portals in the NASA Giovanni system have been made available for NLDAS and GLDAS online visualization, analysis, and intercomparison.

Rui, Hualan↗

Photospheric origins of chromospheric and coronal activity

This contract is for a two-year research study of the origins of activity in the upper atmosphere of the sun. The approach is to collect high resolution images of the lower atmosphere on observing runs at the Swedish Solar Observatory on La Palma, Canary Islands, Spain. The best observations are analyzed and compared with data from other telescopes and/or theoretical models, to study magnetic flux emergence, coronal heating, and various dynamic phenomena and transients. Software for analysis and visualization of the data is developed as needed. The contract is being performed by the Solar and Astrophysics Laboratory, part of the Lockheed Palo Alto Research Laboratory (LPARL) of the Research and Development Division (RDD) of Lockheed Missiles and Space Co., Inc. (LMSC).

Tarbell, Theodore↗

Hydrological Data at the NASA GES DISC: Current Capabilities and New Opportunities

The NASA Goddard Earth Sciences Data and Information Services Center (GES DISC) is one of twelve NASA Earth science data centers that document, process, archive and distribute data from Earth observation missions and projects. GES DISC maintains an archive of several hydrology datasets, including the Land Data Assimilation Systems (LDAS) and the Gravity Recovery and Climate Experiment (GRACE) Data Assimilation for Drought Monitoring (GRACE-DA-DM) data products. These datasets include model output of heat fluxes, rain, snow, soil temperature, soil moisture, and runoff; and observational forcing data, including surface pressure, temperature, precipitation, downward shortwave and longwave radiation, humidity, and wind. The temporal resolution of the hydrology data at GES DISC ranges from hourly to monthly, and spatial resolutions range from 0.1° to 1.0°. The GES DISC provides services which enable users to aggregate, temporally and spatially subset, regrid, and visualize archived data including the GES DISC Subsetter, Hydrology Data Rods, and the Geospatial Interactive Online Visualization and Analysis Infrastructure (GIOVANNI). The Hydrology Data Rods service optimally reorganizes large hydrological data sets as extended time series, providing more efficient access for the hydrological community. The time series data (aka “data rods”) were integrated into hydrology community tools, such as the Data Rods Explorer on HydroShare. Furthermore, the GES DISC is in the process of migrating its data and services to the cloud. Hydrological data available at the GES DISC are now available in the Amazon Web Services (AWS) cloud (us-west-2 region) providing users Direct S3 data access and the capability for cloud computing operations. In this presentation, the hydrology data products and services currently available at the GES DISC will be summarized. Also discussed are the migration to the cloud, user support through this transition, and the status of migrating the data rods service to the cloud.

Ashley Heath↗

MOSAIC: Software for creating mosaics from collections of images

We have developed a powerful, versatile image processing and analysis software package called MOSAIC, designed specifically for the manipulation of digital astronomical image data obtained with (but not limited to) two-dimensional array detectors. The software package is implemented using the Interactive Data Language (IDL), and incorporates new methods for processing, calibration, analysis, and visualization of astronomical image data, stressing effective methods for the creation of mosaic images from collections of individual exposures, while at the same time preserving the photometric integrity of the original data. Since IDL is available on many computers, the MOSAIC software runs on most UNIX and VAX workstations with the X-Windows or Sun View graphics interface.

Varosi, F.↗

Detection of regional air pollution episodes utilizing satellite data in the visual range

A comparative analysis of satellite-observed haze patterns and ground-based aerosol measurements is carried out for July 20-23, 1978. During this period, a significant regional air pollution episode existed across the northeastern United States, accompanied by widespread haze, reduced surface visibility, and elevated sulfate levels measured by the Sulfate Regional Experiment (SURE) network. The results show that the satellite-observed haze patterns correlate closely with the area of reported low surface visibility (less than 4 mi) and high sulfate levels. Quantitative information on total aerosol loading derived from the satellite-digitized data, using an atmospheric radiative transfer model, agrees well with the results obtained from the ground-based measurements.

Bowley, C. J.↗

Explore Earth Science Datasets for STEM with the NASA GES DISC Online Visualization and Analysis Tool, Giovanni

The NASA Goddard Earth Sciences (GES) Data and Information Services Center(DISC) is one of twelve NASA Science Mission Directorate (SMD) Data Centers that provide Earth science data, information, and services to users around the world including research and application scientists, students, citizen scientists, etc. The GESDISC is the home (archive) of remote sensing datasets for NASA Precipitation and Hydrology, Atmospheric Composition and Dynamics, etc. To facilitate Earth science data access, the GES DISC has been developing user-friendly data services for users at different levels in different countries. Among them, the Geospatial Interactive Online Visualization ANd aNalysis Infrastructure (Giovanni, http:giovanni.gsfc.nasa.gov) allows users to explore satellite-based datasets using sophisticated analyses and visualization without downloading data and software, which is particularly suitable for novices (such as students) to use NASA datasets in STEM (science, technology, engineering and mathematics) activities. In this presentation, we will briefly introduce Giovanni along with examples for STEM activities.

precipitation↗

Scalable Adaptive Graphics Environment (SAGE) Software for the Visualization of Large Data Sets on a Video Wall

The use of collaborative scientific visualization systems for the analysis, visualization, and sharing of "big data" available from new high resolution remote sensing satellite sensors or four‐dimensional numerical model simulations is propelling the wider adoption of ultra‐resolution tiled display walls interconnected by high speed networks. These systems require a globally connected and well‐integrated operating environment that provides persistent visualization and collaboration services. This abstract and subsequent presentation describes a new collaborative visualization system installed for NASA's Shortterm Prediction Research and Transition (SPoRT) program at Marshall Space Flight Center and its use for Earth science applications. The system consists of a 3 x 4 array of 1920 x 1080 pixel thin bezel video monitors mounted on a wall in a scientific collaboration lab. The monitors are physically and virtually integrated into a 14' x 7' for video display. The display of scientific data on the video wall is controlled by a single Alienware Aurora PC with a 2nd Generation Intel Core 4.1 GHz processor, 32 GB memory, and an AMD Fire Pro W600 video card with 6 mini display port connections. Six mini display‐to‐dual DVI cables are used to connect the 12 individual video monitors. The open source Scalable Adaptive Graphics Environment (SAGE) windowing and media control framework, running on top of the Ubuntu 12 Linux operating system, allows several users to simultaneously control the display and storage of high resolution still and moving graphics in a variety of formats, on tiled display walls of any size. The Ubuntu operating system supports the open source Scalable Adaptive Graphics Environment (SAGE) software which provides a common environment, or framework, enabling its users to access, display and share a variety of data‐intensive information. This information can be digital‐cinema animations, high‐resolution images, high‐definition video‐teleconferences, presentation slides, documents, spreadsheets or laptop screens. SAGE is cross‐platform, community‐driven, open‐source visualization and collaboration middleware that utilizes shared national and international cyberinfrastructure for the advancement of scientific research and education.

Jedlovec, Gary↗