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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 379 records · Page 21

A Novel and Secure Pseudovirus Reporter System Based Assay for Neutralizing and Enhancing Antibody Assay Against Marburg Virus

Marburg virus (MARV) is one of the principal members of the filovirus family, which can cause fatal hemorrhagic fever in humans. There are currently no prophylactic and therapeutic drugs on the market, and the high pathogenicity and infectivity of MARV make its research highly dependent on biosafety level 4 conditions, severely hindering the development of vaccines and therapies. Therefore, the development of medicines, such as MARV serological diagnosis, vaccines, and therapeutic antibody drugs, urgently needs a safe, convenient, and biosafety level 2 detection method to measure the neutralizing activity of MARV antibodies. To this end, we report a neutralization assay relying on a Rabies virus (RABV) reverse genetic operating system. We constructed infectious clones carrying the eGFP reporter gene and the full length of the original unmodified MARV GP gene. Based on the critical parameters of phylogenetic analysis, recombinant viruses targeting representative strains in the two major MARV lineages were successfully rescued. These pseudoviruses are safe in mice, and their inability to infect cells after being neutralized by antibodies can be visualized under a fluorescence microscope. We tested the system using the neutralizing antibody MR191. MR191 can significantly block the infection of BSR cells with pseudovirus. We compared it with the traditional lentivirus-type pseudovirus system to verify the system’s credibility and obtained the same results as reported in the literature. In general, we have established a safe and visualized method for evaluating the neutralizing activity of MARV antibodies. Compared with traditional methods, it has the advantages of convenient operation, short cycle, and low cost. It is a candidate method that can replace actual viruses for a neutralization assay.

Bi, Jinhao↗

Eagle Take Minimization System

Laufer Wind (LW) has developed a prototype Eagle Take Minimization System that shows capabilities for autonomously detecting, tracking, and visually identifying eagles and other protected avians out to approximately 1 km range with no human-in-the-loop. This type of detection system is important for animals that fly too close to facilities that can harm them, such as large wind turbine farms. The Eagle Take Minimization System consists of networked and sensor-fused commercial-off-the-shelf (COTS) X-band radars, PZT visible cameras and a Central Controller computer that can be interfaced with a wind facility SCADA. The intended design of the Eagle Take System is to detect and reliably identify eagles at far enough range so that proximate turbines can be stopped to greatly reduce the risk of eagle injury or death. These curtailed turbines would be released when eagles have moved away. Other wind turbines that are not in close proximity to eagles would continue producing electricity as usual throughout the process.

17 WIND ENERGY↗

Urban Energy Systems: Research at Oak Ridge National Laboratory

In the coming decades, our planet will witness unprecedented urban population growth in both established and emerging communities. The development and maintenance of urban infrastructures are highly energy-intensive. Urban areas are dictated by complex intersections among physical, engineered, and human dimensions that have significant implications for traffic congestion, emissions, and energy usage. In this chapter, we highlight recent research and development efforts at Oak Ridge National Laboratory (ORNL), the largest multipurpose science laboratory within the U.S. Department of Energy’s (DOE) national laboratory system, that characterizes the interactions between the human dynamics and critical infrastructures in conjunction with the integration of four distinct components: data, critical infrastructure models, and scalable computation and visualization, all within the context of physical and social systems. Discussions focus on four key topical themes: population and land use, sustainable mobility, the energy-water nexus, and urban resiliency, that are mutually aligned with DOE’s mission and ORNL’s signature science and technology capabilities. Using scalable computing, data visualization, and unique datasets from a variety of sources, the institute fosters innovative interdisciplinary research that integrates ORNL expertise in critical infrastructures including energy, water, transportation, and cyber, and their interactions with the human population.

Bhaduri, Budhu↗

Monitoring the daily evolution and extent of snow drought

Abstract. Snow droughts are commonly defined as below-average snowpack at a point in time, typically 1 April in the western United States (wUS). This definition is valuable for interpreting the state of the snowpack but obscures the temporal evolution of snow drought. Borrowing from dynamical systems theory, we applied phase diagrams to visually examine the daily evolution of snow water equivalent (SWE) and accumulated precipitation conditions in maritime, intermountain, and continental snow climates in the wUS using station observations as well as spatially distributed estimates of SWE and precipitation. Using a percentile-based drought definition, phase diagrams of SWE and precipitation highlighted decision-relevant aspects of snow drought such as onset, evolution, and termination. The phase diagram approach can be used in tandem with spatially distributed estimates of daily SWE and precipitation to reveal variability in snow drought type and extent. When combined with streamflow or other environmental data, phase diagrams and spatial estimates of snow drought conditions can help inform drought monitoring and early warning systems and help link snow drought type and evolution to impacts on ecosystems, water resources, and recreation. A web tool is introduced allowing users to create real-time or historic snow drought phase diagrams.

54 ENVIRONMENTAL SCIENCES↗

Grid Modernization of Cooperatives and Municipal Utilities via Breakthrough System Monitoring, Control and Optimization

Develop and validate new grid visualization, control paradigms, and business models for Holy Cross Energy (HCE) through integration of grid-friendly intelligent DER assets. Project Impact: Enable cooperatives and municipally-owned utilities to fully leverage DERs as part of their strategies for providing safe, reliable, and affordable electric services. Meets U.S. Department of Energy (DOE) grid modernization goal of achieving at least 10% active devices to provide grid flexibility by 2035.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Towards Semantic Search in Building Sensor Data

This paper presents a search engine system for sensor time series data and metadata in the context of building management. It takes natural language queries as input, retrieves sensor time series data, ranks them with respect to their relevance to a given query, and visualizes the time series as search results. In addition, the system allows users to interact with the search results: they can define events of interest in the visualized results and search across sensor data for similar events, i.e., the search by example scheme. Quantitative evaluations and user studies demonstrate the value of this system for managing building sensor data.

96 KNOWLEDGE MANAGEMENT AND PRESERVATION↗

Foxtail mosaic virus-induced gene silencing (VIGS) in switchgrass (Panicum virgatum L.)

Abstract Background Although the genome for the allotetraploid bioenergy crop switchgrass ( Panicum virgatum ) has been established, limitations in mutant resources have hampered in planta gene function studies toward crop optimization. Virus-induced gene silencing (VIGS) is a versatile technique for transient genetic studies. Here we report the implementation of foxtail mosaic virus (FoMV)-mediated gene silencing in switchgrass in above- and below-ground tissues and at different developmental stages. Results The study demonstrated that leaf rub-inoculation is a suitable method for systemic gene silencing in switchgrass. For all three visual marker genes, Magnesium chelatase subunit D ( ChlD ) and I ( ChlI ) as well as phytoene desaturase ( PDS ), phenotypic changes were observed in leaves, albeit at different intensities. Gene silencing efficiency was verified by RT-PCR for all tested genes. Notably, systemic gene silencing was also observed in roots, although silencing efficiency was stronger in leaves (~ 63–94%) as compared to roots (~ 48–78%). Plants at a later developmental stage were moderately less amenable to VIGS than younger plants, but also less perturbed by the viral infection. Conclusions Using FoMV-mediated VIGS could be achieved in switchgrass leaves and roots, providing an alternative approach for studying gene functions and physiological traits in this important bioenergy crop.

59 BASIC BIOLOGICAL SCIENCES↗

LongBondEliminator: A Molecular Simulation Tool to Remove Ring Penetrations in Biomolecular Simulation Systems

We develop a workflow, implemented as a plugin to the molecular visualization program VMD, that can fix ring penetrations with minimal user input. LongBondEliminator, detects ring piercing artifacts by the long, strained bonds that are the local minimum energy conformation during minimization for some assembled simulation system. The LongBondEliminator tool then automatically treats regions near these long bonds using multiple biases applied through NAMD. By combining biases implemented through the collective variables module, density-based forces, and alchemical techniques in NAMD, LongBondEliminator will iteratively alleviate long bonds found within molecular simulation systems. Through three concrete examples with increasing complexity, a lignin polymer, an viral capsid assembly, and a large, highly glycosylated protein aggrecan, we demonstrate the utility for this method in eliminating ring penetrations from classical MD simulation systems. The tool is available via gitlab as a VMD plugin, and has been developed to be generically useful across a variety of biomolecular simulations.

59 BASIC BIOLOGICAL SCIENCES↗

System and method of managing large data files

Disclosed are systems and software that provide a high-performance, extensible file format and web API for remote data access and a visual interface for data viewing, query, and analysis. The described system can support storage of raw spectroscopic data such as neural recording data, MSI data, metadata, and derived analyses in a single, self-describing format that may be compatible by a large range of analysis software.

Bowen, Benjamin P.↗

Integrated positron emission particle tracking (PEPT) and X-ray computed tomography (CT) imaging of flow phenomena in twisted tape swirl flow

Abstract A combined positron emission particle tracking (PEPT) and X-ray computed tomography (CT) technique is presented, and its utility is demonstrated through investigation of flow in a pipe with twisted tape swirl insert with varying flow conditions (diameter-based Reynolds numbers 16,300–63,300). A description of this technique is given, as well as data handling practices used to relate geometric information captured by CT to fluid flow data gathered via PEPT. It is found that the CT component is readily capable of capturing the stainless steel insert geometry in this present system, but the use of combined plastic and metal materials leads to artifacts in imaging of the plastic surface. Nonetheless, CT data are related to PEPT flow measurements, and average velocity fields are calculated via a pseudo-framing and interpolation scheme and used to visualize and interrogate key flow phenomena within the system. Radial velocity profiles of the mean flow characteristics are seen to collapse to a nearly common form across all flow conditions considered. Helical vortices are seen propagating through the flow field, generated by bypass flow around the gap between the insert and pipe wall, with additional coherent secondary flow structures seen in the higher Reynolds number cases. These findings enhance the understanding of the mixing mechanisms in these swirl flows and encourage the continued development of PEPT-CT methodologies for 3D flow measurements in optically inaccessible systems.

42 ENGINEERING↗

Expansion of the Fuel Motion Monitoring System

The Idaho National Laboratory (INL) Transient Reactor Test Facility (TREAT) Fuel Motion Monitoring System (FMMS) is a diagnostic tool used to visualize the movement and location of fuel within the nuclear reactor during transient experiments. TREAT is designed to test the behavior of nuclear fuel under accident conditions, such as a rapid power increase. The TREAT FMMS, also referred to as the “hodoscope” because of the system’s massive steel collimator component, is located on the North beam port of the reactor. While the FMMS system is capable of incorporating a total of 360 sensors, initial refurbishment efforts resulted in a array of 96 fast neutron detectors. This initial array was configured to provide a narrow (2 channels) full-length view of experiment vessels with an extended 4-channel–wide region in the center of the array capable of providing a full view of all initially planned experiments. Planning and efforts to expand the FMMS array began immediately following the restart of TREAT. An additional 96 detectors were evaluated, characterized, and prepared for installation at TREAT during the summer of 2018. Unfortunately, funding reductions forced the project towards a 5-year hiatus. In October of 2023 funding from the Department of Energy’s Nuclear Science User Facilities enabled the expansion to recommence. This report serves to document the activities performed to expand the FMMS detector array to 192 channels in order to provide a broader view of the larger and more sophisticated test capsules currently planned for future irradiation in the TREAT reactor. This expansion also included doubling the data acquisition capability, addressing the new heat load on the system, and synchronizing the time for all digital components.

11 - NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

Interactive Visualization of Complex Seismic Data and Models Using Bokeh

Visualizing multidimensional data and models becomes more challenging as the volume and resolution of seismic data and models increase. But thanks to the development of powerful and accessible computer systems, a model web browser can be used to visualize complex scientific data and models dynamically. In this paper, we present four examples of seismic model visualization using an open-source Python package Bokeh. One example is a visualization of a surface-wave dispersion data set, another presents a view of three-component seismograms, and two illustrate methods to explore a 3D seismic-velocity model. Unlike other 3D visualization packages, our visualization approach has a minimum requirement on users and is relatively easy to develop, provided you have reasonable programming skills. Finally, utilizing familiar web browsing interfaces, the dynamic tools provide us an effective and efficient approach to explore large data sets and models.

58 GEOSCIENCES↗

Visualization of Multi-Dimensional Imaging Data for the DIII-D National Fusion Facility

With funding provided from the Office of Fusion Energy Science’s program on Diagnostic Systems for Magnetic Fusion Energy Sciences, the PI and his team have pioneered the development of microwave imaging systems for magnetic fusion plasma diagnostics. Specifically, electron cyclotron emission (ECE) imaging [1], a passive radiometric technique, measures electron temperature fluctuations; and microwave imaging reflectometry (MIR) [2], an active radar imaging technique, measures electron density fluctuations. These microwave imaging diagnostic instruments developed by UC Davis have made important contributions to fusion science in a relatively short period of time from their original installation on DIII-D. The microwave imaging diagnostic technique has matured considerably since the beginning of a fruitful collaboration with DIII-D and PPPL, and has also been adopted at preeminent tokamak facilities worldwide. As discussed in detail in the following, this has continued with the development of revolutionary microwave diagnostic instruments employing monolithic millimeter wave integrated circuit (MMIC) system-on-chip (SoC) technology. Specifically, “chip” receivers mounted in liquid crystal polymer (LCP) modules have been demonstrated to dramatically improve the performance of the electron cyclotron emission imaging (ECEI) system including: 30x improvement in noise temperature thereby permitting absolute 2-D electron temperature images, outstanding shielding against out-of-band interference including microwave bursting which had plagued previous ELM studies using the old quasi-optical mini-lens ECEI system, and independent modules facilitating flexible repair and replacement. Under the “Visualization of multi-dimensional imaging data for the DIII-D National Fusion Facility” program, funding was provided for a research scientist postdoc and a Ph.D. student to support physics studies at DIII-D employing these instruments. This endeavor is synergistic with our current grant under the DOE Fusion Energy Sciences (FES) program on Diagnostic Systems for Magnetic Fusion Energy Sciences. This support considerably increased the scientific output of the diagnostics. The activities were strongly focused in the areas of pedestal and ELM stability, energetic particle confinement, and the early detection and avoidance of tokamak disruptions employing the microwave imaging diagnostic instruments developed under the advanced diagnostics program where imaging of the ELM crash was made possible by the elimination of the interference from the associated microwave “bursts”

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

A Typology of Decision-Making Tasks for Visualization

Despite decision-making being a vital goal of data visualization, little work has been done to differentiate decision-making tasks within the field. While visualization task taxonomies and typologies exist, they often focus on more granular analytical tasks that are too low-level to describe large complex decisions, which can make it difficult to reason about and design decision-support tools. In this paper, we contribute a typology of decision-making tasks that were iteratively refined from a list of design goals distilled from a literature review. Our typology is concise and consists of only three tasks: CHOOSE, ACTIVATE, and CREATE. Although decision types originating in other disciplines exist, we provide definitions for these tasks that are suitable for the visualization community. Our proposed typology offers two benefits. First, the ability to compose and hierarchically organize the tasks enables flexible and clear descriptions of decisions with varying levels of complexities. Second, the typology encourages productive discourse between visualization designers and domain experts by abstracting the intricacies of data, thereby promoting clarity and rigorous analysis of decision-making processes. We demonstrate the benefits of our typology through four case studies, and present an evaluation of the typology from semi-structured interviews with experienced members of the visualization community who have contributed to developing or publishing decision support systems for domain experts. Our interviewees used our typology to delineate the decision-making processes supported by their systems, demonstrating its descriptive capacity and effectiveness. Finally, we present preliminary findings on the usefulness of our typology for visualization design.

97 MATHEMATICS AND COMPUTING↗

Enhancing the applicability of multicomponent time-dependent density functional theory

The multicomponent extension of time-dependent density functional theory (TDDFT) within the nuclear-electronic orbital (NEO) framework enables the calculation of both electronic and vibrational excitations simultaneously. In this NEO-TDDFT approach, all electrons and select nuclei, typically protons, are treated quantum mechanically on the same level. Herein, the dependence of the proton vibrational excitation energies on the nuclear and electronic basis sets is examined. Protonic basis sets that include f basis functions in conjunction with substantial electronic basis sets for the quantum hydrogen are found to produce accurate proton vibrational excitation energies that are mostly within ~30 cm -1 of reference values for the molecules studied. The NEO-TDDFT approach is shown to be effective for open-shell as well as closed-shell systems. Additionally, an approach for computing and visualizing the nuclear transition densities associated with the proton vibrational excitations is implemented. These nuclear transition densities are important for characterizing the proton vibrational excitations and determining the spatial orientations of the corresponding vibrational modes. These capabilities are essential for a variety of applications, including the incorporation of anharmonic effects into molecular vibrational frequency calculations.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

CityBES v2021

City Buildings, Energy, and Sustainability (CityBES) is a web-based data and computing platform, focusing on energy modeling and analysis of a city's building stock to support district or city-scale building energy efficiency programs. CityBES uses an international open data standard, CityGML, to represent and exchange 3D city models. CityBES employs EnergyPlus to simulate building energy use and savings from energy efficient retrofits. Other CityBES features include energy benchmarking, district heating and cooling system modeling, rooftop PV analysis, building performance visualization, heat resilience modeling, as well as urban scale mapping of microclimate and heat vulnerability at census tract level. Different from other tools, CityBES uses integrated open and standard 3D city building data and models each individual building using EnergyPlus. CityBES can be used by urban planners, city energy managers, building owners, utilities, energy consultants and researchers.

Hong, Tianzhen↗

WELLS Database

The Wellbore Exploration and Location Logistic System (WELLS) is a living national wellbore database - created and maintained by the National Energy Technology Laboratory (NETL). This resource contains more than seven million public wellbore records from state, federal, and tribal resources. Sourced from over 65 authoritative, yet disparate resources, the WELLS Database combines and synthesizes well data from oil, gas, underground injection, research, geothermal, geotechnical, groundwater and other types of wells in a single, unified system. This resource can be explored and visualized through the WELLS Interactive Application, also on EDX: https://edx.netl.doe.gov/dataset/wells-interactive-application The WELLS Database (formerly titled CO2-Locate) is an integrated national well dataset, representing open-source wellbore data from disparate state, tribal, and federal entities. The database provides publicly available well header data with key attributes such as well age, depth, and status. The database contains a fully integrated CSV file with all values in numerical columns, such as depth, converted into numbers. This version has a NETL derived API (American Petroleum Institute) number column and has been handled for redundancies, resulting in one record for every unique API number. The database also contains a fully integrated CSV file, where all original data are kept as text values. Additionally, the database includes a shapefile containing key attributes and coordinates from the integrated dataset, reformatted public wells CSV files, and a proprietary well density grid shapefile. Notes for consideration: The WELLS Database will be updated periodically with new datasets and information. A field dictionary with field (i.e., attribute) coverage across acquired public well resources, and the resulting integrated public well datasets are available in the spreadsheet, WELLS_Field_Dictionary.xlsx. Summary layers provided in this database are derived from proprietary layers and do not always contain key features (status, type, true vertical depth, or spud year) and therefore might not be shown when data are queried for those features.

AS↗

Laboratory Evaluation of Tunable White LEDs for Circadian Lighting in Commercial Offices

Tunable white Light-Emitting Diode (LED) systems that allow users to control Correlated Color Temperature (CCT) are often marketed for circadian health, which is an emerging priority in commercial office lighting. However, the energy impacts of meeting circadian criteria with standard non-tunable LEDs and with tunable white LEDs are not well understood. The goals of this project were to implement select commercial lighting systems, including tunable white LEDs, to meet visual and circadian criteria in an office environment, and to quantify lighting performance and energy usage. Most recent studies on tunable white LEDs, circadian lighting strategies, and energy impacts have relied on computer simulations and models. While little research has directly measured tunable LED energy usage for circadian criteria, EPRI has recently published results from a lab-based evaluation of illuminance, spectral output, and energy consumption for several LED products marketed for circadian performance. The research presented here contributes to the field by quantifying the performance of market-available technologies through detailed monitoring of performance parameters (such as illuminance, spectral output, glare, and energy consumption) in a physical space (an office environment).

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗