Search NASA⌕ Search

SEARCH · Search NASA

Results for “chlorophyll”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 379 records · Page 21

Analysis of testbed airborne multispectral scanner data from Superflux II

A test bed aircraft multispectral scanner (TBAMS) was flown during the James Shelf, Plume Scan, and Chesapeake Bay missions as part of the Superflux 2 experiment. Excellent correlations were obtained between water sample measurements of chlorophyll and sediment and TBAMS radiance data. The three-band algorithms used were insensitive to aircraft altitude and varying atmospheric conditions. This was particularly fortunate due to the hazy conditions during most of the experiments. A contour map of sediment, and also chlorophyll, was derived for the Chesapeake Bay plume along the southern Virginia-Carolina coastline. A sediment maximum occurs about 5 nautical miles off the Virginia Beach coast with a chlorophyll maximum slightly shoreward of this. During the James Shelf mission, a thermal anomaly (or front) was encountered about 50 miles from the coast. There was a minor variation in chlorophyll and sediment across the boundary. During the Chesapeake Bay mission, the Sun elevation increased from 50 degrees to over 70 degrees, interfering with the generation of data products.

Bowker, D. E.↗

Analysis of ocean color scanner data from the Superflux III Experiment

The scanner collected data on October 15, 20, and 22, 1980. Single-channel gray-scale data products generated 5 minutes after the scanner were collected and showed details of the Chesapeake plume structure, suggesting that this quick-look capability could have potential use for experiments in real time. The Chesapeake Bay plume extended offshore about 5 nautical miles on October 15, and 7 nautical miles on October 20. Using the October 15 1980, data, a correlation coefficient of r = 0.889 was obtained between chlorophyll 'A' and the ratio of band 7 (664-684 nanometers) to band 9 (746-766 nanometers). This ratio was then used to calculate the average surface chlorophyll 'A' concentration of the water flowing out of the Chesapeak Bay. A ratio from the Ocean Color Scanner bands was created to simulate the ratio that the Multichannel Ocean Color Sensor uses to calculate chlorophyll A concentrations. Using the October 15, 1980, data set, this ratio has a correlation coefficient of r = -0.739 with the log of the chlorophyll 'A' and the ratio of band 2 minus band 4 to band 2 plus band 4 of the Ocean Color Scanner. No correlation is found between the Ocean Color Scanner data and total suspended solid measurements made on October 15, 1980.

Ohlhorst, C. W.↗

Detection of hidden mineral deposits by airborne spectral analysis of forest canopies

Data from field surveys and biogeochemical tests conducted in Maine, Montana, and Washington strongly correlate with results obtained using high resolution airborne spectroradiometer which detects an anomalous spectral waveform that appears definitely associated with sulfide mineralization. The spectral region most affected by mineral stress is between 550 nm and 750 nm. Spectral variations observed in the field occur on the wings of the red chlorophyll band centered at about 690 nm. The metal-stress-induced variations on the absorption band wing are most successfully resolved in the high spectral resolution field data using a waveform analysis technique. The development of chlorophyll pigments was retarded in greenhouse plants doped with copper and zinc in the laboratory. The lowered chlorophyll production resulted in changes on the wings of the chlorophyll bands of reflectance spectra of the plants. The airborne spectroradiometer system and waveform analysis remains the most sensitive technique for biogeochemical surveys.

Collins, W.↗

Coastal Zone Color Scanner data of rich coastal waters

Comparisons of chlorophyll concentrations and diffuse attenuation coefficients measured from ships off the central California coast were made with satellite derived estimates of the same parameters using data from the Coastal Zone Color Scanner. Very high chlorophyll concentrations were encountered in Monterey Bay. Although lower chlorophyll values acquired off Pt. Sur agreed satisfactorily with the satellite data, the high chlorophyll values departed markedly from agreement. Two possible causes for the disagreement are suggested. Comparison of diffuse attenuation coefficients from the same data sets showed closer agreement.

Wrigley, R. C.↗

Active-passive airborne ocean color measurement. II - Applications

Reported here for the first time is the use of a single airborne instrument to make concurrent measurements of oceanic chlorophyll concentration by (1) laser-induced fluorescence, (2) passive upwelling radiance, and (3) solar-induced chlorophyll fluorescence. Results from field experiments conducted with the NASA airborne oceanographic lidar (AOL) in the New York Bight demonstrate the capability of a single active-passive instrument to perform new and potentially important ocean color studies related to (1) active lidar validation of passive ocean color in-water algorithms, (2) chlorophyll a in vivo fluorescence yield variability, (3) calibration of active multichannel lidar systems, (4) effect of sea state on passive and active ocean color measurements, (5) laser/solar-induced chlorophyll fluorescence investigations, and (6) subsequent improvement of satellite-borne ocean color scanners. For validation and comparison purposes a separate passive ocean color sensor was also flown along with the new active-passive sensor during these initial field trials.

Hoge, F. E.↗

Coupling of Coastal Zone Color Scanner data to a physical-biological model of the southeastern U.S. continental shelf ecosystem. I - CZCS data description and Lagrangian particle tracing experiments. II - An Eulerian model. III - Nutrient and phytoplankton fluxes and CZCS data assimilation

Surface phytoplankton biomass of the southeastern U.S. continental shelf area is discussed based on coastal zone color scanner (CZCS) images obtained in April 1980. Data of chlorophyll distributions are analyzed in conjunction with concurrent flow and temperature fields. Lagrangian particle tracing experiments show that the particles move consistently with the evolution of the chlorophyll patterns. A four-component physical-biological model for a horizontal plane at a nominal depth of 17 m is presented. Model simulations using various physical-biological dynamics and boundary conditions show that the variability of chlorophyll distributions is controlled by horizontal advection. Phytoplankton and nutrient fluxes, calculated using the model, show considerable variability with time. The chlorophyll distributions obtained from the CZCS images are assimilated into the model to improve the phytoplankton flux estimates.

Ishizaka, Joji↗

Dynamics of the transition zone in coastal zone color scanner-sensed ocean color in the North Pacific during oceanographic spring

A transition zone in phytoplankton concentration running across the North Pacific basin at 30 deg to 40 deg north latitude corresponds to a basin-wide front in surface chlorophyll observed in a composite of coastal zone color scanner (CZCS) images for May, June, and July 1979-1986. This transition zone with low chlorophyll to the south and higher chlorophyll to the north can be simulated by a simple model of the concentration of phytoplankton, zooplankton, and dissolved nutrient (nitrate) in the surface mixed layer of the ocean applied to the North Pacific basin for the climatological conditions during oceanographic springtime (May, June, and July). The model is initialized with a 1 deg x 1 deg gridded estimate of wintertime (February, March, and April) mixed layer nitrate concentrations calculated from an extensive nutrient database and a similarly gridded mixed layer depth data set. Comparison of model predictions with CZCS data provides a means of evaluating the dynamics of the transition zone. We conclude that in the North Pacific, away from major boundary currents and coastal upwelling zones, wintertime vertical mixing determines the total nutrient available to the plankton ecosystem in the spring. The transition zone seen in basin-scale CZCS images is a reflection of the geographic variation in the wintertime mixed layer depth and the nitracline, leading to a latitudinal gradient in phytoplankton chlorophyll.

Glover, David M.↗

A numerical analysis of shipboard and coastal zone color scanner time series of new production within Gulf Stream cyclonic eddies in the South Atlantic Bight

Eddy-induced upwelling occurs along the western edge of the Gulf Stream between Cape Canaveral, Florida, and Cape Hatteras, North Carolina, in the South Atlantic Bight (SAB). Coastal zone color scanner images of 1-km resolution spanning the period April 13-21, 1979, were processed to examine these eddy features in relation to concurrent shipboard and current/temperature measurements at moored arrays. A quasi-one-dimensional (z), time dependent biological model, using only nitrate as a nutrient source, has been combined with a three-dimensional physical model in an attempt to replicate the observed phytoplankton field at the northward edge of an eddy. The model is applicable only to the SAB south of the Charleston Bump, at approximately 31.5 deg N, since no feature analogous to the bump exists in the model bathymetry. The modeled chlorophyll, nitrate, and primary production fields of the euphotic zone are very similar to those obtained from the satellite and shipboard data at the leading edges of the observed eddies south of the Charleston Bump. The horizontal and vertical simulated fluxes of nitrate and chlorophyll show that only approximately 10% of the upwelled nitrate is utilized by the phytoplankton of the modeled grid box on the northern edge of the cyclone, while approximately 75% is lost horizontally, with the remainder still in the euphotic zone after the 10-day period of the model. Loss of chlorophyll due to sinking is very small in this strong upwelling region of the cyclone. The model is relatively insensitive to variations in the sinking parameterization and the external nitrate and chlorophyll fields but is very sensitive to a reduction of the maximum potential growth rate to half that measured. Given the success of this model in simulating the new production of the selcted upwelling region, other upwelling regions for which measurements or successful models of physical and biological quantities and rates exist could be modeled similarly.

Pribble, J. Raymond↗

The effects of temporal variability of mixed layer depth on primary productivity around Bermuda

Temporal variations in primary production and surface chlorophyll concentrations, as measured by ship and satellite around Bermuda, were simulated with a numerical model. In the upper 450 m of the water column, population dynamics of a size-fractionated phytoplankton community were forced by daily changes of wind, light, grazing stress, and nutrient availability. The temporal variations of production and chlorophyll were driven by changes in nutrient introduction to the euphotic zone due to both high- and low-frequency changes of the mixed layer depth within 32 deg-34 deg N, 62 deg-64 deg W between 1979 and 1984. Results from the model derived from high-frequency (case 1) changes in the mixed layer depth showed variations in primary production and peak chlorophyll concentrations when compared with results from the model derived from low-frequency (case 2) mixed layer depth changes. Incorporation of size-fractionated plankton state variables in the model led to greater seasonal resolution of measured primary production and vertical chlorophyll profiles. The findings of this study highlight the possible inadequacy of estimating primary production in the sea from data of low-frequency temporal resolution and oversimplified biological simulations.

Bissett, W. Paul↗

Ocean color and atmospheric dimethyl sulfide: On their mesoscale variability

The mesoscale variability of dimethyl sulfide (DMS) and ocean color is explored to determine the feasibility of a predictive relationship. During NASA's Global Tropospheric Experiment/Chemical Instrumentation Test and Evaluation (GTE/CITE 3), simultaneous shipboard and aircraft studies were carried out in the North Atlantic, followed by aircraft studies in the South Atlantic. Surface concentrations of chlorophyll alpha were measured with an airborne spectroradiometer, the Ocean Data Acquisition System (ODAS), with simultaneous determinations of tropospheric DMS. Shipboard measurements of DMS in air and water as well as in situ chlorophyll alpha were taken in the North Atlantic. No relation was observed between shipboard aquatic DMS and chlorophyll alpha or primary productivity. Higher levels of aqueous DMS were not always reflected by atmospheric DMS, although shipboard and aircraft measurements of atmospheric DMS agreed very well. A significant relationship between atmospheric DMS and ocean color was seen once at low altitudes in both the North and South Atlantic only under clean air conditions. Atmospheric DMS levels during the North Atlantic experiment were probably lowered by the presence of mostly polluted air masses in the study area and were, overall, probably not representative of the in situ sea-to-air flux of DMS. Changes in concentration of aircraft-sensed chlorophyllous pigments were not reflected by atmospheric DMS. If a predictive algorithm is to be found, phytoplankton blooms should probably be the first place to study an ocean color-DMS relationship.

Matrai, Patricia A.↗

[MODIS Investigation]

We are responsible for the delivery of two at-launch products for AM-1: Fluorescence line height (FLH) and chlorophyll fluorescence efficiency (CFE). In our last report we had planned to combine the two separate algorithms into a single piece of code. However, after discussions with Bob Evans, it was decided that it was best to leave the two algorithms separate. They have been integrated into the MOCEAN processing system, and given their low computational requirements, it easier to keep them separate. In addition, there remain questions concerning the specific chlorophyll product that will be used for the CFE calculation. Presently, the CFE algorithm relies on the chlorophyll product produced by Ken Carder. This product is based on a reflectance model, and is theoretically different than the chlorophyll product being provided by Dennis Clark (NOAA). These two products will be compared systematically in the coming months. If we decide to switch to the Clark product, then it will be simpler to modify the CFE algorithm if it remains separate from the FLH algorithm. Our focus for the next six months is to refine the quality flags that were delivered as part of the algorithm last summer. A description of these flags was provided to Evans for the MOCEAN processing system. A summary was included in the revised ATBD. Some of the flags depend on flags produced by the input products so coordination will be required.

Abbott, Mark R.↗

OCTS And Seawifs Bio-Optical Algorithm and Product Vaildattion and Intercomparison in US Coastal Waters

Monitoring the health of U.S. coastal waters is an important goal of the National Oceanic and Atmospheric Administration (NOAA). Satellite sensors are capable of providing daily synoptic data of large expanses of the U.S. coast. Ocean color sensor, in particular, can be used to monitor the water quality of coastal waters on an operational basis. To appraise the validity of satellite-derived measurements, such as chlorophyll concentration, the bio-optical algorithms used to derive them must be evaluated in coastal environments. Towards this purpose, over 21 cruises in diverse U.S. coastal waters have been conducted. Of these 21 cruises, 12 have been performed in conjunction with and under the auspices of the NASA/SIMBIOS Project. The primary goal of these cruises has been to obtain in-situ measurements of downwelling irradiance, upwelling radiance, and chlorophyll concentrations in order to evaluate bio-optical algorithms that estimate chlorophyll concentration. In this Technical Memorandum, we evaluate the ability of five bio-optical algorithms, including the current SeaWiFS algorithm, to estimate chlorophyll concentration in surface waters of the South Atlantic Bight (SAB). The SAB consists of a variety of environments including coastal and continental shelf regimes, Gulf Stream waters, and the Sargasso Sea. The biological and optical characteristics of the region is complicated by temporal and spatial variability in phytoplankton composition, primary productivity, and the concentrations of colored dissolved organic matter (CDOM) and suspended sediment. As such, the SAB is an ideal location to test the robustness of algorithms for coastal use.

Brow, Chirstopher↗

OCTS and SeaWiFS Bio-Optical Algorithm and Product Validation and Intercomparison in US Coastal Waters

Monitoring the health of US coastal waters is an important goal of the National Oceanic and Atmospheric Administration (NOAA). Satellite sensors are capable of providing daily synoptic data of large expanses of the US coast. Ocean color sensors, in particular, can be used to monitor the water quality of coastal waters on an operational basis. To appraise the validity of satellite-derived measurements, such as chlorophyll concentration, the bio-optical algorithms used to derive them must be evaluated in coastal environments. Towards this purpose, over 21 cruises in diverse US coastal waters have been conducted. Of these 21 cruises, 12 have been performed in conjunction with and under the auspices of the NASA/Sensor Intercomparison and Merger for Biological and Interdisciplinary Oceanic Studies (SIMBIOS) Project. The primary goal of these cruises has been to obtain in-situ measurements of downwelling irradiance, upwelling radiance, and chlorophyll concentrations in order to evaluate bio-optical algorithms that estimate chlorophyll concentration. In this Technical Memorandum, we evaluate the ability of five bio-optical algorithms, including the current Sea-Viewing Wide Field-of-view Sensor (SeaWiFS) algorithm, to estimate chlorophyll concentration in surface waters of the South Atlantic Bight (SAB). The SAB consists of a variety of environments including coastal and continental shelf regimes, Gulf Stream waters, and the Sargasso Sea. The biological and optical characteristics of the region is complicated by temporal and spatial variability in phytoplankton composition, primary productivity, and the concentrations of colored dissolved organic matter (CDOM) and suspended sediment. As such, the SAB is an ideal location to test the robustness of algorithms for coastal use.

Brown, Christopher W.↗

Response of Grape Leaf Spectra to Phylloxera Infestation

During the 1993 growing season, leaf reflectance and chlorophyll concentrations were monitored with respect to phylloxera (root-louse) infestation in a Napa Valley (California) vineyard. Study plots were established in areas of severely infested, mildly infested, and uninfested sections of the vineyard. A handheld chlorophyll meter, measuring leaf transmittance of near-infrared and red light, confirmed that reduced foliar chlorophyll concentrations were symptomatic of phylloxera stress in the sample vines. Bidirectional reflectance measurements of green and near-infrared light, taken on fresh leaves with a laboratory spectrophotometer, were related to chlorophyll concentration but did not allow discrimination of mildly infested from uninfested vines.

Johnson, Lee F.↗

Comparing SeaWiFS Reprocessing Versions (R3 vs. R4)

Satellite observations of global ocean chlorophyll from SeaWiFS were recently reprocessed to incorporate calibration and algorithm improvements. Here, comparisons are made between the newly reprocessed SeaWiFS Level-3 chlorophyll product and the previous version using in situ measurements. The results show that the newly reprocessed SeaWiFS data matches up better with the surface measurements than the previous version did. Globally, the slope of the match-ups improves to 0.85 from 0.78 in log-log scale. A significant trend that contributed to this improvement was the overall decrease in SeaWiFS chlorophyll levels less than 1.0 mg m(exp -3). Regional analyses reveal that the matchups improve in every oceanic basin, except the Antarctic. However, SeaWiFS continues to exhibit poor correspondence with in situ data in the North Atlantic where the match-ups have a slope of 0.54. Also, an examination of monthly images for May 1999 revealed that the number and magnitude of high-value chlorophyll pixels had increased in the high-latitude open ocean of the South Pacific.

Casey, Nancy W.↗

Optical Reflectance and Fluorescence for Detecting Nitrogen Needs in Zea mays L.

Nitrogen (N) status in field grown corn (Zea mays L.) was assessed using spectral techniques. Passive reflectance remote sensing and, both passive and active fluorescence sensing methods were investigated. Reflectance and fluorescence methods are reported to detect changes in the primary plant pigments (chlorophylls a and b; carotenoids) in higher plant species. As a general rule, foliar chlorophyll a (Chl a) and chlorophyll b (Chl b) usually exist in approx.3:l ratio. In plants under stress, Chl b content is affected before Chl a reductions occur. For reflectance, a version of the chlorophyll absorption in reflectance index (CARI) method was tested with narrow bands from the Airborne Imaging Spectroradiometer for Applications (ASIA). CARI minimizes the effects of soil background on the signal from green canopies. A modified CARI (MCARI) was used to track total Chl a levels in the red dip of the spectrum from the corn canopy. A second MCARI was used to track the auxiliary plant pigments (Chl b and the carotenoids) in the yellow/orange/red edge part of the reflectance spectrum. The difference between these two MCARI indices detected variations in N levels across the field plot canopies using ASIA data. At the leaf level, ratios of fluorescence emissions in the blue, green, red and far-red wavelengths sensed responses that were associated with the plant pigments, and were indicative of energy transfer in the photosynthetic process. N stressed corn stands could be distinguish from those with optimally applied N with fluorescence emission spectra obtained from individual corn leaves. Both reflectance and fluorescence methods are sensitive in detecting corn N needs and may be especially powerful in monitoring crop conditions if both types of information can be combined.

McMurtrey, J. E.↗

Glycine betaine accumulation, ionic and water relations of red-beet at contrasting levels of sodium supply

Exposure of plants to sodium (Na) and salinity may increase glycine betaine accumulation in tissues. To study this, red-beet cvs. Scarlet Supreme and Ruby Queen, were grown for 42 days in a growth chamber using a re-circulating nutrient film technique with 0.25 mmol/L K and either 4.75 mmol/L (control) or 54.75 mmol/L (saline) Na (as NaCl). Plants were harvested at weekly intervals and measurements were taken on leaf water relations, leaf photosynthetic rates, chlorophyll fluorescence, chlorophyll levels, glycine betaine levels, and tissue elemental composition. Glycine betaine accumulation increased under salinity and this accumulation correlated with higher tissue levels of Na in both cultivars. Na accounted for 80 to 90% of the total cation uptake under the saline treatment. At final harvest (42 days), K concentrations in laminae ranged from approximately 65-95 micromoles g-1 dry matter (DM), whereas Na in shoot tissue ranged from approximately 3000-4000 micromoles g-1. Leaf sap osmotic potential at full turgor [psi(s100)] increased as lamina Na content increased. Glycine betaine levels of leaf laminae showed a linear relationship with leaf sap [psi(s100)]. Chlorophyll levels, leaf photosynthetic rates, and chlorophyll fluorescence were not affected by Na levels. These results suggest that the metabolic tolerance to high levels of tissue Na in red-beet could be due to its ability to synthesize and regulate glycine betaine production, and to control partitioning of Na and glycine betaine between the vacuole and the cytoplasm.

NASA Center KSC↗

Origin of petroporphyrins. 2. Evidence from stable carbon isotopes

Compared with the carbon-13 isotopic composition of the ubiquitous C32DPEP (DPEP, deoxophylloerythroetioporphyrin) the heavy but equivalent carbon-13 isotopic composition for the porphyrin structures 15(2)-methyl-15,17-ethano-17-nor-H-C30DPEP and 15,17-butano-, 13,15-ethano-13(2),17-propano-, and 13(1)-methyl-13,15-ethano-13(2),17-propanoporphyrin suggests a common precursor, presumably chlorophyll c, for these petroporphyrins isolated from the marine Julia Creek oil shale and the lacustrine Condor oil shale. Similarly, the heavy but variable carbon-13 isotopic composition of 7-nor-H-C31DPEP compared with C32DPEP is consistent with an origin from both chlorophyll b and chlorophyll c3. The equivalent carbon-13 isotopic composition for 13(2)-methyl-C33DPEP compared with C32DPEP suggests a common origin resulting from a weighted average of chlorophyll inputs.

NASA Program Exobiology↗