Optimizing cathodoluminescence microscopy of buried interfaces through nanoscale heterostructure design
Spatial resolution and brightness in cathodoluminescence can be tuned by nanoscale design of samples.
Francaviglia, Luca↗
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Normative Ranges for Oculomotor and Reaction Time Tests in U.S. Military Service Members and Veterans
AbstractBackground Oculomotor and reaction time tests are frequently used assessments of vestibular symptoms, traumatic brain injury (TBI), or other neurological disorders in both clinical and research contexts. When interpreting these tests it is important to have a reference interval (RI) as a comparison for what constitutes a typical/expected response; however, the current body of research has only limited information regarding normative ranges calculated according to established standards or for a military-specific sample.Purpose The purpose of the present study was to describe RIs for oculomotor and reaction time tests in a cohort of service members and veterans (SMVs) for use as comparators by clinicians and scientists.Research Design Descriptive.Study Sample Participants were prospectively enrolled in the Defense and Veterans Brain Injury Center-Traumatic Brain Injury Center of Excellence 15-year Longitudinal Traumatic Brain Injury Study. Only SMVs without a history of TBI or blast exposure were included in the RI calculations.Data Collection and Analysis The test paradigms included in this analysis were: smooth pursuit, prosaccades, antisaccades, saccades and reaction time, predictive saccades, optokinetic nystagmus, auditory reaction time, and visual reaction time. Nonparametric methods, based on the U.S. Food and Drug Administration's recognized consensus standards, were used to calculate 95% RIs. A comparison between the calculated RIs and those available from previously published research is provided.Results Summary statistics and RIs were calculated for 47 outcome parameters from 13 oculomotor and reaction time tests. Sample sizes and age ranges varied across outcome parameters depending on the availability of reference values for RI calculations. The sample sizes used to calculate RIs ranged from 51 to 69. The age of SMVs included in each RI ranged from 19 to 61 years with mean ages ranging from 37 to 39 years. Similarities/differences between the RIs in the present study and those in previously published research are highly dependent on the outcome parameter; however, in general, the RIs in the present study tended to be somewhat wider.Conclusion The RIs provided in this paper can serve as comparisons for clinicians and scientists who are utilizing these oculomotor and reaction time testing paradigms in similar cohorts of patients or research participants.
Audiology & Speech-Language Pathology↗
Enhanced configurational sampling with hybrid non-equilibrium molecular dynamics–Monte Carlo propagator
Molecular dynamics (MD) trajectories based on classical equations of motion can be used to sample the configurational space of complex molecular systems. However, brute-force MD often converges slowly due to the ruggedness of the underlying potential energy surface. Several schemes have been proposed to address this problem by effectively smoothing the potential energy surface. However, in order to recover the proper Boltzmann equilibrium probability distribution, these approaches must then rely on statistical reweighting techniques or generate the simulations within a Hamiltonian tempering replica-exchange scheme. The present work puts forth a novel hybrid sampling propagator combining Metropolis-Hastings Monte Carlo (MC) with proposed moves generated by non-equilibrium MD (neMD). This hybrid neMD-MC propagator comprises three elementary elements: (i) an atomic system is dynamically propagated for some period of time using standard equilibrium MD on the correct potential energy surface; (ii) the system is then propagated for a brief period of time during what is referred to as a “boosting phase,” via a time-dependent Hamiltonian that is evolved toward the perturbed potential energy surface and then back to the correct potential energy surface; (iii) the resulting configuration at the end of the neMD trajectory is then accepted or rejected according to a Metropolis criterion before returning to step 1. A symmetric two-end momentum reversal prescription is used at the end of the neMD trajectories to guarantee that the hybrid neMD-MC sampling propagator obeys microscopic detailed balance and rigorously yields the equilibrium Boltzmann distribution. The hybrid neMD-MC sampling propagator is designed and implemented to enhance the sampling by relying on the accelerated MD and solute tempering schemes. It is also combined with the adaptive biased force sampling algorithm to examine. Illustrative tests with specific biomolecular systems indicate that the method can yield a significant speedup.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Radiation furnace for synchrotron dark-field x-ray microscopy experiments
We present a multi-purpose radiation furnace designed for x-ray experiments at synchrotrons. The furnace is optimized specifically for dark-field x-ray microscopy (DFXM) of crystalline materials at beamline ID06 of the European Synchrotron Radiation Facility. The furnace can reach temperatures above 1200 °C with a thermal stability better than 10 °C, with heating and cooling rates up to 30 K/s. The non-contact heating design enables samples to be heated either in air or in a controlled atmosphere contained within a capillary tube. The temperature was calibrated via the thermal expansion of an α-iron grain. Temperature profiles in the y and z axes were measured by scanning a thermocouple through the focal spot of the radiation furnace. In the current configuration of the beamline, this furnace can be used for DFXM, near-field x-ray topography, bright-field x-ray nanotomography, high-resolution reciprocal space mapping, and limited powder diffraction experiments. As a first application, we present a DFXM case study on isothermal heating of a commercially pure single crystal of aluminum.
Yildirim, C. (ORCID:0000000249690685)↗
Machine-learning approach to the design of OSDAs for zeolite beta
We report a machine-learning strategy for design of organic structure directing agents (OSDAs) for zeolite beta. We use machine learning to replace a computationally expensive molecular dynamics evaluation of the stabilization energy of the OSDA inside zeolite beta with a neural network prediction. We train the neural network on 4,781 candidate OSDAs, spanning a range of stabilization energies. We find that the stabilization energies predicted by the neural network are highly correlated with the molecular dynamics computations. We further find that the evolutionary design algorithm samples the space of chemically feasible OSDAs thoroughly. In total, we find 469 OSDAs with verified stabilization energies below -17 kJ/(mol Si), comparable to or better than known OSDAs for zeolite beta, and greatly expanding our previous list of 152 such predicted OSDAs. We expect that these OSDAs will lead to syntheses of zeolite beta.
42 ENGINEERING↗
Genomes to ecosystem function: Targeting critical knowledge gaps in methanogenesis and translation to updated global biogeochemical models (Wrighton Ohio State Report -- Early Career Department of Energy)
In 2018 our key deliverable was a temporally and spatially resolved investigation of the microbial community across wetland soils. As part of this experimental design we sampled 3 land coverage types at a total of 10 sites: Mud (Mud-1, Mud-2, Mud-3), Plant (Nelumbo-1, Nelumbo-2, Nelumbo-3, Typha-1), Open water (Open Water-1, Open Water-2, Open Water-3). Within each site we collected 3-5 soil cores, sub-sampled at the surface (0-5 cm), middle (10- 15 cm), and deep (25-30 cm) depths. Additionally in August, during peak methane emission, we conducted a higher-resolved depth sampling at 5 cm intervals: 0-5, 5-10, 10-15, 15-20, 20-25 and 25-30 cm depths. In total, from a single field season, we collected over 950 samples for paired microbial, geochemical, and metabolite data. Additionally, all measurements were paired to in situ soil greenhouse gas measurements, and emission chamber measurements.
54 ENVIRONMENTAL SCIENCES↗
Ice Cryo-Encapsulation Balloon (Project ICEBall) Field Campaign Report
The Ice Cryo-Encapsulation Balloon (ICEBall) field campaign was designed to sample the ice crystals that compose high-altitude cirrus with a passive device. The campaign made use of a new instrument, ICEBall, which is a balloon-borne ice crystal sampling system. The ice crystal sounding system is capable of measuring ice crystal concentration, temperature, atmospheric pressure, ice crystal habit, aerosol particle morphology, and residual composition. The 3-kg instrument is carried upwards at 5 m s-1 by a high-altitude balloon. The instrument can be cut down from the balloon at any altitude up to 20 km, and the apparatus returns to the surface by parachute. Basic measurements such as temperature and pressure are recorded onboard, and high-frequency Global Positioning System (GPS) records altitude and latitude/longitude. Ice crystal concentrations are measured through the use of a high-resolution video camera mounted on the device. Ice crystals are collected through an open aperture leading to insulated collection chambers cooled with dry ice. Upon exiting the top of the cloud system, the chamber aperture is closed, and the ~1 mm3 sample cell is magnetically sealed and isolated at -78 °C, ensuring that ice particles do not sublimate or grow after collection. Once the crystals are returned to the surface, they are double-sealed and immersed at liquid nitrogen temperature in “dry-cryo shippers” before being transported back to the laboratory. Dr. Magee’s laboratory at The College of New Jersey contains a cryo-stage scanning electron microscope (SEM), which was used to interrogate the crystals and aerosol particles. The main purpose of this pilot field campaign was to provide an unprecedented level of detail on the crystal habits and ice surface complexity in mid-latitude cirrus, which may help resolve issues associated with habit identification and classification in cirrus. The ICEBall campaign was originally scheduled to run from March 28 to April 18 of 2021 at the U.S. Department of Energy Atmospheric Radiation Measurement (ARM) Southern Great Plains observatory. The COVID-19 pandemic intervened and caused us to shift the dates of the experiment to October 16-November 6 of 2021. This period is also climatologically favorable for cirrus. The approximately six-month gap between our original field campaign dates and the actual dates afforded us the opportunity to build two new ICEBall payload instruments. These instruments were tested during an August 2021 trip to The College of New Jersey. During this field testing phase, we decided to launch the ICEBall payload upstream from the ARM SGP site with the goal of landing in the vicinity of the site. Our goal was to sample the ice crystals before the cirrus were advected over the remote-sensing instruments at the SGP site. The team assembled for the field campaign consisted of the Principle Investigator (PI) and Co-Principle Investigator (Co-PI) (Drs. Harrington and Magee), The Pennsylvania State University research scientist Dr. Alfred Moyle, and two graduate students (Ms. Marley Majetic and Gwenore Pokrifka). The team operated out of a house rented in Enid, Oklahoma. We successfully sampled seven cirrus cloud systems during the three-week field campaign (October 21, 23-26, 31, and November 1). This was a much higher success rate than either of the PIs anticipated (our goal was closer to sampling three or four cases). The balloon was typically launched from oil pads or farm fields northwest of Enid and the payload was typically retrieved somewhat north of the SGP site. We never landed directly at the SGP site, and so did not need regular access to the SGP facilities. Our greatest concern going into the field campaign was the longer-term storage of crystals in the -196°C cryo dry-shipper dewars and the subsequent transport across the country. We had tested storage and transport prior to the field campaign, but we had never stored crystals for a few weeks nor had we transported the dewars over long distances. To our great relief, the storage and transport worked flawlessly and we were able to image a large number of crystals from six of the seven cases. Working with the staff at the ARM SGP office was excellent. They not only helped us find the sources we needed for helium, liquid nitrogen, and other materials, but also helped with contacts within the Federal Aviation Administration (FAA) and Vance Air Force Base. One goal of our field project was to tie the in situ measurements of ice crystal habits to the radar signatures derived from the Ka-band ARM Zenith-pointing Radar (KAZR). Unfortunately KAZR was down for the duration of our experiment. However, the Ka-band Scanning ARM Cloud Radar (KASACR) was put into vertically pointing mode during the ICEBall campaign and those data, along with Doppler lidar measurements, have proved very useful.
54 ENVIRONMENTAL SCIENCES↗
Cryogenic Control Circuitry for Superconducting Qubits
Superconducting qubits have reached the point where system designers are worried about the heat that control wiring brings into the cryostat. To continue scaling cryogenic quantum systems, control solutions that work inside the cold space must be explored. One possibility is to use control electronics that is native to superconductivity, so called single-flux-quantum (SFQ) circuitry, to form an interface between qubits and whatever other electronics is needed to control eventual quantum systems. To begin exploring the utility of SFQ as control circuitry, we performed modeling and experiments on qubit readout using ballistic fluxons which are SFQ in the limit of ballistic fluxon transport. Our modeling results show that a flavor of qubit, the fluxonium, can be read out using ballistic fluxons. We designed test samples to prove some of the key concepts needed for such a readout but were ultimately unable to getting a working demonstration. The lack of testing success was due to challenges in fabrication and running short of time to perform testing rather than a fundamental problem with our analysis.
75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗
Development of an L-Edge X-ray Absorbance Spectrometer for Monitoring Dissolver Solutions in H-Canyon
Savannah River National Laboratory has developed a monitor to measure plutonium and uranium concentrations in solutions of dissolved nuclear fuel. The monitor will be installed in the sample aisle location for the 6.3D Dissolver in the Savannah River Site’s H-Canyon and used in support of the electrolytic dissolution such as Fast Critical Assembly fuel. The monitor is based on the atomic absorbance of x-rays. Elements are differentiated by the appearance of absorbance features at specific energies of the x-ray spectrum that correspond to L-edge transitions of inner core electrons. Hence, the technique is called L-Edge X-Ray Absorbance Spectroscopy (L-XRAS). The technique is suitable for nuclear fuel processing due to its relative insensitivity to other components of the dissolver solution, such as nitric acid, transition metals (Fe, Cr, Ni, Mn) such as those from stainless steel, particulates, and catalysts and additives. The instrumentation consists of a commercially available x-ray source and detector, a sample cell designed to interface with the airlift sampler associated with H-Canyon Tank 6.3D, and a stainless steel enclosure. SRNL wrote instrument control software and developed chemometric models to interpret x-ray intensity spectra and estimate analyte concentrations and uncertainties in real time.
12 MANAGEMENT OF RADIOACTIVE AND NON-RADIOACTIVE W↗
Making an s1G Self-Preserving Environmental DNA (eDNA) Filter from Sustainable Materials
Environmental DNA (eDNA) sampling of aquatic environments is a powerful new tool for resource managers to use in detecting the presence of rare and endangered species. The use of eDNA for species detection is quickly becoming an industry-standard methodology in environmental science, and the technology sector is moving quickly to create purpose-built tools for eDNA sampling. Smith-Root, Inc. pioneered the new technology of self-preserving eDNA filters that automatically preserve the DNA captured on filters by desiccating the internal filter membrane. This capability saves the sampling technician significant time in the field and drastically reduces the potential for sample contamination. One main constraint of this new technology, however, is the necessity of single-use plastics for eDNA sampling. Single-use designs are employed because sampling equipment must be devoid of potential contaminating DNA, and the time required to sterilize equipment is often not cost-effective for practitioners. Thus, this technology is creating a significant new source of plastic waste—something that eDNA practitioners, and society, would like to avoid. This project explores the use of alternative bio based polymers and composites as replacements for incumbent industrial standards for eDNA filtration systems, with an emphasis on ease of processing and biodegradable options. 8 candidate materials, 3 for the top filter housing and 5 for the bottom filter housing, were investigated to replace incumbent housing materials. Of the 8 candidates, 2 materials were identified for future investigation which met performance requirements, were bio-based and could potentially offer better disposal options like soil degradation or composting, features sought by the customers of these products. The top housing candidate, material 1, has comparable performance to the incumbent material and equally manufacturable. The bottom housing candidate, material 6, improved desiccation performance by 81% after 1 hour in comparison to the incumbent material, is 100% bio-based, compostable and can be sourced domestically throughout the U.S.A.
36 MATERIALS SCIENCE↗
A Graphics Processing Unit (GPU) Approach to Large Eddy Simulation (LES) for Transport and Contaminant Dispersion
Recent advances in the development of large eddy simulation (LES) atmospheric models with corresponding atmospheric transport and dispersion (AT&D) modeling capabilities have made it possible to simulate short, time-averaged, single realizations of pollutant dispersion at the spatial and temporal resolution necessary for common atmospheric dispersion needs, such as designing air sampling networks, assessing pollutant sensor system performance, and characterizing the impact of airborne materials on human health. The high computational burden required to form an ensemble of single-realization dispersion solutions using an LES and coupled AT&D model has, until recently, limited its use to a few proof-of-concept studies. An example of an LES model that can meet the temporal and spatial resolution and computational requirements of these applications is the joint outdoor-indoor urban large eddy simulation (JOULES). A key enabling element within JOULES is the computationally efficient graphics processing unit (GPU)-based LES, which is on the order of 150 times faster than if the LES contaminant dispersion simulations were executed on a central processing unit (CPU) computing platform. JOULES is capable of resolving the turbulence components at a suitable scale for both open terrain and urban landscapes, e.g., owing to varying environmental conditions and a diverse building topology. In this paper, we describe the JOULES modeling system, prior efforts to validate the accuracy of its meteorological simulations, and current results from an evaluation that uses ensembles of dispersion solutions for unstable, neutral, and stable static stability conditions in an open terrain environment.
54 ENVIRONMENTAL SCIENCES↗
Void-Engineered Metamaterial Delay Line with Built-In Impedance Matching for Ultrasonic Applications
Metamaterials exhibit unique ultrasonic properties that are not always achievable with traditional materials. However, the structures and geometries needed to achieve such properties are often complex and difficult to obtain using common fabrication techniques. In the present research work, we report a novel metamaterial acoustic delay line with built-in impedance matching that is fabricated using a common 3D printer. Delay lines are commonly used in ultrasonic inspection when signals need to be separated in time for improved sensitivity. However, if the impedance of the delay line is not perfectly matched with those of both the sensor and the target medium, a strong standing wave develops in the delay line, leading to a lower energy transmission. The presented metamaterial delay line was designed to match the acoustic impedance at both the sensor and target medium interfaces. This was achieved by introducing graded engineered voids with different densities at both ends of the delay line. The measured impedances of the designed metamaterial samples show a good match with the theoretical predictions. The experimental test results with concrete samples show that the acoustic energy transmission is increased by 120% and the standing wave in the delay line is reduced by over a factor of 2 compared to a commercial delay line.
36 MATERIALS SCIENCE↗
45 GeV e-p collisions, SM type, PCSIM generator: gev45ep_pcsim_upsilon
Upsilon(1S) production to e+e-. Collision energy: E(p)=100 GeV and E(e-)=5 GeV. CM energy is 44.7 GeV. There samples are designed for detector studies, and are not be expected to be realistic in terms of the cross sections. The cross section includes the original cross section times the branching ratio Upsilon(1S) to electrons.
72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
45 GeV e-p collisions, SM type, PCSIM generator: gev45ep_pcsim_jpsi
J/Psi production to e+e-. Collision energy: E(p)=100 GeV and E(e-)=5 GeV. CM energy is 44.7 GeV. The cross section includes the original cross section times the branching ratio J/Psi to electrons. There samples are designed for detector studies, and are not be expected to be realistic in terms of the cross sections.
72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
The DESI Survey Validation: Results from Visual Inspection of Bright Galaxies, Luminous Red Galaxies, and Emission-line Galaxies
The Dark Energy Spectroscopic Instrument (DESI) Survey has obtained a set of spectroscopic measurements of galaxies to validate the final survey design and target selections. To assist in these tasks, we visually inspect DESI spectra of approximately 2500 bright galaxies, 3500 luminous red galaxies (LRGs), and 10,000 emission-line galaxies (ELGs) to obtain robust redshift identifications. We then utilize the visually inspected redshift information to characterize the performance of the DESI operation. Based on the visual inspection (VI) catalogs, our results show that the final survey design yields samples of bright galaxies, LRGs, and ELGs with purity greater than 99%. Moreover, we demonstrate that the precision of the redshift measurements is approximately 10 km s –1 for bright galaxies and ELGs and approximately 40 km s –1 for LRGs. The average redshift accuracy is within 10 km s –1 for the three types of galaxies. The VI process also helps improve the quality of the DESI data by identifying spurious spectral features introduced by the pipeline. Finally, we show examples of unexpected real astronomical objects, such as Ly α emitters and strong lensing candidates, identified by VI. These results demonstrate the importance and utility of visually inspecting data from incoming and upcoming surveys, especially during their early operation phases.
79 ASTRONOMY AND ASTROPHYSICS↗
Effects of gas–wall partitioning in Teflon tubing and instrumentation on time-resolved measurements of gas-phase organic compounds
Recent studies have demonstrated that organic compounds can partition from the gas phase to the walls in Teflon environmental chambers and that the process can be modeled as absorptive partitioning. Here these studies were extended to investigate gas–wall partitioning of organic compounds in Teflon tubing and inside a proton-transfer-reaction mass spectrometer (PTR-MS) used to monitor compound concentrations. Rapid partitioning of C 8 –C 14 2-ketones and C 11 –C 16 1-alkenes was observed for compounds with saturation concentrations ( c * ) in the range of 3 × 10 4 to 1 × 10 7 µg m -3 , causing delays in instrument response to step-function changes in the concentration of compounds being measured. These delays vary proportionally with tubing length and diameter and inversely with flow rate and c * . The gas–wall partitioning process that occurs in tubing is similar to what occurs in a gas chromatography column, and the measured delay times (analogous to retention times) were accurately described using a linear chromatography model where the walls were treated as an equivalent absorbing mass that is consistent with values determined for Teflon environmental chambers. The effect of PTR-MS surfaces on delay times was also quantified and incorporated into the model. The model predicts delays of an hour or more for semivolatile compounds measured under commonly employed conditions. These results and the model can enable better quantitative design of sampling systems, in particular when fast response is needed, such as for rapid transients, aircraft, or eddy covariance measurements. They may also allow estimation of c * values for unidentified organic compounds detected by mass spectrometry and could be employed to introduce differences in time series of compounds for use with factor analysis methods. Best practices are suggested for sampling organic compounds through Teflon tubing.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
Generating porosity during olivine carbonation via dissolution channels and expansion cracks
Abstract. The olivine carbonation reaction, in which carbon dioxide is chemically incorporated to form carbonate, is central to the emerging carbon sequestration method using ultramafic rocks. The rate of this retrograde metamorphic reaction is controlled, in part, by the available reactive surface area: as the solid volume increases during carbonation, the feasibility of this method ultimately depends on the maintenance of porosity and the creation of new reactive surfaces. We conducted in situ dynamic X-ray microtomography and nanotomography experiments to image and quantify the porosity generation during olivine carbonation. We designed a sample setup that included a thick-walled cup (made of porous olivine aggregates with a mean grain size of either ∼ 5 or ∼ 80 µm) filled with loose olivine sands with grain sizes of 100–500 µm. The whole sample assembly was reacted with a NaHCO 3 aqueous solution at 200 °C, under a constant confining pressure of 13 MPa and a pore pressure of 10 MPa. Using synchrotron-based X-ray microtomography, the three-dimensional (3-D) pore structure evolution of the carbonating olivine cup was documented until the olivine aggregates became disintegrated. The dynamic microtomography data show a volume reduction in olivine at the beginning of the reaction, indicating a vigorous dissolution process consistent with the disequilibrium reaction kinetics. In the olivine cup with a grain size of ∼ 80 µm (coarse-grained cup), dissolution planes developed within 30 h, before any precipitation was observed. In the experiment with the olivine cup of ∼ 5 µm mean grain size (fine-grained cup), idiomorphic magnesite crystals were observed on the surface of the olivine sands. The magnesite shows a near-constant growth throughout the experiment, suggesting that the reaction is self-sustained. Large fractures were generated as the reaction proceeded and eventually disintegrated the aggregate after 140 h. Detailed analysis show that these are expansion cracks caused by the volume mismatch in the cup walls, between the expanding interior and the near-surface which keeps a nearly constant volume. Nanotomography images of the reacted olivine cup reveal pervasive etch pits and wormholes in the olivine grains. We interpret this perforation of the solids to provide continuous fluid access, which is likely key to the complete carbonation observed in nature. Reactions proceeding through the formation of nano- to micron-scale dissolution channels provide a viable microscale mechanism in carbon sequestration practices. For the natural peridotite carbonation, a coupled mechanism of dissolution and reaction-induced fracturing should account for the observed self-sustainability of the reaction.
37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗