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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 379 records · Page 21
All sourcesNASA NTRSDOE OSTI
DOE OSTI2020

A genoscape–network model for conservation prioritization in a migratory bird

Migratory animals are declining worldwide and coordinated conservation efforts are needed to reverse current trends. We devised a novel genoscape-network model that combines genetic analyses with species distribution modeling and demographic data to overcome challenges with conceptualizing alternative risk factors in migratory species across their full annual cycle. We applied our method to the long distance, Neotropical migratory bird, Wilson's Warbler (Cardellina pusilla). Despite a lack of data from some wintering locations, we demonstrated how the results can be used to help prioritize conservation of breeding and wintering areas. For example, we showed that when genetic, demographic, and network modeling results were considered together it became clear that conservation recommendations will differ depending on whether the goal is to preserve unique genetic lineages or the largest number of birds per unit area. More specifically, if preservation of genetic lineages is the goal, then limited resources should be focused on preserving habitat in the California Sierra, Basin Rockies, or Coastal California, where the 3 most vulnerable genetic lineages breed, or in western Mexico, where 2 of the 3 most vulnerable lineages overwinter. Alternatively, if preservation of the largest number of individuals per unit area is the goal, then limited conservation dollars should be placed in the Pacific Northwest or Central America, where densities are estimated to be the highest. Overall, our results demonstrated the utility of adopting a genetically based network model for integrating multiple types of data across vast geographic scales and better inform conservation decision-making for migratory animals.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

Assessing the exposure of three diving bird species to offshore wind areas on the U.S. Atlantic Outer Continental Shelf using satellite telemetry

Abstract Aim The United States Atlantic Outer Continental Shelf (OCS) has considerable offshore wind energy potential. Capturing that resource is part of a broader effort to reduce CO 2 emissions. While few turbines have been constructed in U.S. waters, over a dozen currently planned offshore wind projects have the potential to displace marine birds, potentially leading to effective habitat loss. We focused on three diving birds identified in Europe to be vulnerable to displacement. Our research aimed to determine their potential exposure to areas designated or proposed for offshore wind development along the Atlantic OCS. Methods Satellite tracking technology was used to determine the spatial and temporal use and movement patterns of Surf Scoters ( Melanitta perspicillata ), Red‐throated Loons ( Gavia stellata ) and Northern Gannets ( Morus bassanus ), and calculate their exposure to each offshore wind area. We tagged 236 adults in 2012–2015 on the Atlantic OCS from New Jersey to North Carolina; an additional 147 birds tagged in previous tracking studies were integrated into our analyses. Tracking data were analysed in two‐week intervals using dynamic Brownian bridge movement models to develop composite spatial utilization distributions. For each species, these distributions were then used to calculate the spatio‐temporal exposure to each offshore wind area. Results Surf Scoters and Red‐throated Loons were exposed to offshore wind areas almost exclusively during migration because these species were distributed among coastal and inshore waters during winter months. In contrast, Northern Gannets ranged over a much larger area, reaching farther offshore and south in winter, thus exhibited the greatest exposure to extant offshore wind areas. Conclusions Results of this study provide better understanding of how diving birds use current and potential future offshore wind areas on the Atlantic OCS, and can inform permitting, risk assessment and pre‐ and post‐construction impact assessments of offshore energy infrastructure.

Stenhouse, Iain J.↗
DOE OSTI2021

A general theory of avian migratory connectivity

Birds exhibit a remarkable array of seasonal migrations. Despite much research describing migratory behaviour, the underlying forces driving how a species’ breeding and wintering populations redistribute each year, that is, migratory connectivity, remain largely unknown. Here, we test the hypothesis that birds migrate in a way that minimises energy expenditure while considering intraspecific competition for energy acquisition, by developing a modelling framework that simulates an optimal redistribution of individuals between breeding and wintering areas. Using 25 species across the Americas, we find that the model accurately predicts empirical migration patterns, and thus offers a general explanation for migratory connectivity based on first ecological and energetic principles. Our model provides a strong basis for exploring additional processes underlying the ecology and evolution of migration, but also a framework for predicting how migration impacts local adaptation across seasons and how environmental change may affect population dynamics in migratory species.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2023

Understanding the Computing and Analysis Needs for Resiliency of Power Systems from Severe Weather Impacts

As the frequency and intensity of severe weather has increased, its effect on the electric grid has manifested in the form of significantly more and larger outages in the United States. This has become especially true for regions that were previously isolated from weather extremes. In this paper, we analyze the weather impacts on the electric power grid across a variety of weather conditions, draw correlations, and provide practical insights into the operational state of these systems. High resolution computational modeling of specific meteorological variables, computational approaches to solving power system models under these conditions, and the types of resiliency needs are highlighted as goal-oriented computing approaches are being built to address grid resiliency needs. An example analysis correlating outages to 1km day-ahead weather from two historical winter storms, calculated on a large cluster using a combination of interpolated and extrapolated inputs from multiple instrumented sites to workflows that produce primary meteorological outputs, is shown as initial proof of concept.

analysis↗
DOE OSTI2024

Modeling Spatial Asymmetries in Teleconnected Extreme Temperatures

Abstract Combining strengths from deep learning and extreme value theory can help describe complex relationships between variables where extreme events have significant impacts (e.g., environmental or financial applications). Neural networks learn complicated nonlinear relationships from large datasets under limited parametric assumptions. By definition, the number of occurrences of extreme events is small, which limits the ability of the data-hungry, nonparametric neural network to describe rare events. Inspired by recent extreme cold winter weather events in North America caused by atmospheric blocking, we examine several probabilistic generative models for the entire multivariate probability distribution of daily boreal winter surface air temperature. We propose metrics to measure spatial asymmetries, such as long-range anticorrelated patterns that commonly appear in temperature fields during blocking events. Compared to vine copulas, the statistical standard for multivariate copula modeling, deep learning methods show improved ability to reproduce complicated asymmetries in the spatial distribution of ERA5 temperature reanalysis, including the spatial extent of in-sample extreme events.

Krock, Mitchell L.↗
DOE OSTI2022

Observing, Measuring, and Assessing the Consequences of Snow Drought

Warmer and shorter winters from climate change will reduce snowpacks in most seasonally snow-covered regions of the world, with consequences for freshwater availability in spring and summer when people and ecosystems demand water most. Recent record-low snowpacks, such as those in the winters of 2013/14 and 2014/15 in the western United States, have led to a surge in research on “snow droughts,” which are pointed to as harbingers of global warming that pose significant societal hazards. Yet, despite the importance of understanding snow droughts to best prepare for their attendant impacts, the concept remains amorphous, with no agreed-upon definition of what they are, how best to measure them, and how such snow droughts connect to warm-season impacts. These knowledge gaps limit our understanding of the risks posed by snow droughts in the present and future, and thus our preparedness for their differential impacts on freshwater resources. To address these issues, we compile a hemispheric ensemble of in situ, satellite, and reanalysis snowpack datasets. We use this ensemble to evaluate the scientific challenges and uncertainties arising from differences in defining and measuring snow droughts, and to identify opportunities to leverage this information to better understand the significance of snow droughts. We show that a clearer quantification of what constitutes a snow drought, including its uncertainties, improves our ability to anticipate costly and disruptive warm-season droughts, which is vital for informing risk management and adaptation to changing snow regimes.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Climate Dynamics Preceding Summer Forest Fires in California and the Extreme Case of 2018

Recent record-breaking wildfire seasons in California prompt an investigation into the climate patterns that typically precede anomalous summer burned forest area. Using burned-area data from the U.S. Forest Service’s Monitoring Trends in Burn Severity (MTBS) product and climate data from the fifth major global reanalysis produced by the European Centre for Medium-Range Weather Forecasts (ERA5) over 1984–2018, relationships between the interannual variability of antecedent climate anomalies and July California burned area are spatially and temporally characterized. Lag correlations show that antecedent high vapor pressure deficit (VPD), high temperatures, frequent extreme high temperature days, low precipitation, high subsidence, high geopotential height, low soil moisture, and low snowpack and snowmelt anomalies all correlate significantly with July California burned area as far back as the January before the fire season. Seasonal regression maps indicate that a global midlatitude atmospheric wave train in late winter is associated with anomalous July California burned area. July 2018, a year with especially high burned area, was to some extent consistent with the general patterns revealed by the regressions: low winter precipitation and high spring VPD preceded the extreme burned area. However, geopotential height anomaly patterns were distinct from those in the regressions. Extreme July heat likely contributed to the extent of the fires ignited that month, even though extreme July temperatures do not historically significantly correlate with July burned area. While the 2018 antecedent climate conditions were typical of a high-burned-area year, they were not extreme, demonstrating the likely limits of statistical prediction of extreme fire seasons and the need for individual case studies of extreme years.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

The impacts of horizontal resolution on the seasonally-dependent biases of the northeastern Pacific ITCZ in coupled climate models.

Double-ITCZ has puzzled climate model community for more than two decades. Here, we found that over the eastern Pacific, precipitation and sea surface temperature (SST) biases in the NCAR CESM1 are seasonally-dependent, with positive (negative) precipitation/SST biases during boreal summer/fall (winter/spring), although the easterly wind bias persists around the year. This seasonally-dependent bias of precipitation/SST is found to be caused by the failure of the model to reproduce the climatological seasonal wind reversal of North American monsoon. During winter/spring, the climatological easterly wind dominates, so the stronger wind speed in the model enhances the evaporation and lowers the SST. It is opposite when the climatological wind turns to westerly during summer/fall. The easterly wind bias also occurs in the atmospheric model when the observation SST is prescribed, suggesting it is of atmospheric origin. Further, the easterly wind bias is mainly evident in the lower troposphere and quite independent of time, implying the effect of complex and narrow-ranged Central American topography, which is not depicted well in the coarse model resolution. When the model resolution is doubled, both SST and precipitation are improved with the reduced easterly wind bias. During boreal spring, when ITCZ bias is most significant, the northern and southern ITCZ can be improved by 29% and 18.8% respectively in the higher resolution. Finally, we suggest that these seasonally-dependent biases over the eastern Pacific are quite universal among 37 CMIP5 coupled models, and the ongoing CMIP6 project will provide a valuable opportunity to examine whether the bias can be reduced by increasing model resolution.

Song, Fengfei↗
DOE OSTI2020

On the oceanic origin for the enhanced seasonal cycle of SST in the midlatitudes under global warming

Climate models project an enhancement in SST seasonal cycle over the midlatitude oceans under global warming. However, the maintaining mechanism for this enhancement is still under debate. This study investigates the SST seasonal cycle enhancement under quadrupling CO2 using a set of partially coupled experiments, in which the contribution from direct CO2 forcing (without the effect of wind changes) and wind effects can be isolated. Results indicate that both the direct CO2 and total wind effects contribute to the enhancement in the SST seasonal cycle, with the former (latter) effect being more important in the Northern Hemisphere (Southern Hemisphere). Further decomposition of the wind effect into the wind stress feedback and wind-evaporation-SST (WES) feedback through the change of wind speed reveals the importance of the wind stress-driven ocean response in the change of SST seasonal cycle, a result in contrast to a previous study that ascribed the midlatitude SST seasonal cycle change to the thermodynamic WES feedback. The direct CO2 effect regulates SST seasonal cycle mainly through the mediating effects of the ocean mixed layer depth (MLD): i) the CO2 induced warming leads to MLD shoaling, thus reducing its effective heat capacity; ii) the climatological MLD is greater in winter than summer, given the same amount of energy flux from the surface, SST warming in winter should be smaller. Notably, the surface wind seasonal cycle change due solely to the direct CO2 effect is found to bear a great resemblance to the full wind response, implicating that the direct CO2 effect is the root source for the enhancement of the midlatitude SST seasonal cycle. This is further supported by an ocean-alone experiment that replicates the SST seasonal cycle enhancement under a spatially and temporally homogeneous surface thermal forcing into the ocean.

Liu, Fukai↗
DOE OSTI2021

The Effect of an Equatorial Continent on the Tropical Rain Belt. Part 1: Annual Mean Changes in the ITCZ

The TRACMIP (Tropical Rain Belts with an Annual Cycle and Continent Model Intercomparison Project) ensemble includes slab-ocean aquaplanet controls and experiments with a highly idealized tropical continent, characterized by modified aquaplanet grid cells with increased evaporative resistance, increased albedo, reduced heat capacity, and no ocean heat transport (zero Q-flux). In the annual mean, an equatorial cold tongue develops west of the continent and induces dry anomalies and a split in the oceanic intertropical convergence zone (ITCZ). Ocean cooling is initiated by advection of cold, dry air from the winter portion of the continent; warm, humid anomalies in the summer portion are restricted to the continent by anomalous surface convergence. The surface energy budget suggests that ocean cooling persists and intensifies because of a positive feedback between a colder surface, drier and colder air, reduced downwelling longwave (LW) flux, and enhanced net surface LW cooling (LW feedback). A feedback between wind, evaporation, and SST (so-called WES feedback) also contributes to the establishment and maintenance of the cold tongue. Simulations with a gray-radiation model and simulations that diverge from protocol (with negligible winter cooling) confirm the importance of moist-radiative feedbacks and of rectification effects on the seasonal cycle. This mechanism coupling the continental and oceanic climate might be relevant to the double ITCZ bias. The key role of the LW feedback suggests that the study of interactions between monsoons and oceanic ITCZs requires full-physics models and a hierarchy of land models that considers evaporative processes alongside heat capacity as a defining characteristic of land.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Changes in Aerosols, Meteorology, and Radiation in the Southeastern U.S. Warming Hole Region during 2000 to 2019

Abstract Surface air temperatures in the southeastern United States that did not change from the climatological mean from 1900 to 2000 have increased since the year 2000. Analyzed herein are factors modulating the surface air temperatures in the region for a 20-yr period (2000–19) using space- and surface-based observations, and output from a reanalysis model. The 20-yr period is segregated into two decades, 2000–09 and 2010–19, corresponding to different tropospheric chemical regimes. Changes in seasonal and decadal averages are examined. The later decade experienced higher average surface air temperatures with significant warming during summer and fall seasons. Decadal and seasonal averages of cloud properties, column water vapor, rain rates, and top-of-atmosphere outgoing longwave radiation did not exhibit statistically significant differences between the two decades. The region experienced strong warm and moist advection during the winter months and very weak advection during the summer months. The later decade exhibited higher low-level moisture advection during the winter months than the earlier decade with insignificant changes in the temperature advection between the two decades. The later decade had significantly lower aerosol dry and liquid water mass during all seasons, along with lower aerosol optical depth, higher single scattering albedo, and lower top-of-the-atmosphere outgoing shortwave radiation during cloud-free conditions in the summer season. Collectively, these results suggest that changes in the aerosol direct radiative forcing are responsible for warming during summer months that experience weak advection and highlight seasonal differences in the temperature controlling mechanisms in the region.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

Understanding Observed Precipitation Change and the New Climate Normal from the Perspective of Daily Weather Types in the Southeast United States

Abstract Observed precipitation changes in the Southeast United States (SEUS) are spatially heterogeneous. Most of the inland SEUS and eastern Gulf Coast become drier, and the East Coast north of Charleston, South Carolina, and southern Florida become wetter from the old 30-yr period of 1961–90 to the recent period of 1991–2020. The observed climate change is examined from the perspective of daily weather types (WTs). A k -means clustering analysis has been conducted using daily 850-hPa circulation for 1948–2021. The obtained 10 WTs peak in different seasons, respectively. The frequencies and precipitation intensity of the WTs have been analyzed. A winter WT characterized by a western Appalachian trough (WAT) and a summer WT featuring North Atlantic subtropical high (NASH) have a rising trend of annual frequency from 1948 to 2021. An Appalachian high in the autumn has a decreasing frequency but becomes drier and stronger. Some precipitation intensity change and small location shift have also been observed. The drying up on the eastern Gulf Coast and the inland area of the SEUS is mainly caused by the weakened southwesterly low-level jet (LLJ) on the western flank of the NASH that reduces rain in the spring, the less frequent but stronger and drier Appalachian high in the summer and autumn, and the weaker and more western located Plains trough (PT) in the winter, spring, and autumn. The precipitation increase in the East Coast and southern Florida is majorly due to more frequent, stronger, and rainier troughs along the western Appalachian as well as the East Coast.

Qian, Jian-Hua↗
DOE OSTI2021

Response of U.S. West Coast Mountain Snowpack to Local Sea Surface Temperature Perturbations: Insights from Numerical Modeling and Machine Learning

Sea surface temperature (SST) significantly modulates the precipitation and temperature over land, with important consequences on land surface processes such as snowpack. Compared to the impact of remote SST, the effect of nearshore/local SST is less well understood. In this study, the impact of local SST on the mountain snowpack of the U.S. West Coast is investigated using two 6-km regional climate simulations driven by the same lateral boundary conditions but with time-varying versus time-invariant and warmer local SSTs during 2003–15. Results show that local SST warming leads to warmer winter with more precipitation over the mountains. Meanwhile, the removal of SST temporal variability results in reduced temperature variability but increased precipitation variability. As a result, winter snow accumulation decreases by ~200 mm per season in the Cascade Mountains in the north but increases by ~100 mm per season in the Sierra Nevada in the south. Such a dipole response results from the competing effects of precipitation and temperature change at different elevations and are amplified by the enhanced atmospheric river moisture transport. To further delineate the relative contributions of different meteorological factors to the snowpack response, two neural network models were developed to predict the snow behaviors at seasonal and monthly scales. These models reveal the dominant influence of the total amount and the average temperature of precipitation on the snowpack response. Furthermore, these findings highlight the sensitivity of mountain snowpack to local SST in the western United States and underscore the importance of local SST and atmospheric rives to accurate snowpack estimations for water management.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

X-Band Radar and Surface-Based Observations of Cold-Season Precipitation in Western Colorado’s Complex Terrain

Abstract Hydrologic processes associated with intermountain cold-season precipitation in the Upper Colorado River basin have important impacts on avalanche forecasting and water resource management. However, traditional weather radar networks struggle with observations in this complex terrain. Data collected during the Study of Precipitation, the Lower Atmosphere, and the Surface for Hydrometeorology (SPLASH) and its sister campaign, Surface Atmosphere Integrated Field Laboratory (SAIL) in the East River watershed of western Colorado, are used to examine a multistorm period from 23 December 2021 to 1 January 2022 that contributed 35% of the total winter precipitation in this watershed. Dual-polarization X-band radar and disdrometer measurements show ∼30-mm differences in precipitation amount at two sites in proximity over four distinct storm events within the period. Wind patterns, synoptic forcings, microphysical characteristics of precipitation, and surface meteorology are analyzed to explain the observed spatial variability of cold-season precipitation in complex mountainous terrain. Analysis shows that differences over time within this event are mainly accounted for by synoptic forcings, such as frontal passages; differences between sites are accounted for by the impact of variations in local wind patterns on precipitation microphysics. Patterns of surface precipitation intensity are compared and found to be correlated with X-band radar signatures; a relationship between a strong dendritic growth stage and intense low-density surface precipitation is reinforced by this study. This relationship demonstrates the importance of particle growth mechanisms on surface snowfall patterns in high-altitude complex terrain, underscoring the importance of realistic microphysical parameterizations. Significance Statement The amount and density of snowpack from western Colorado winter storms have significant impacts on water resources in the Upper Colorado River basin. Snowpack characteristics are affected by small-scale differences in how snow forms in the atmosphere. These differences are hard to study in the complex terrain of the Rockies, but data from the SPLASH and SAIL field campaigns allows us to investigate how snow crystal formation and mountain-driven wind patterns affect snow near the surface. Our study finds that snow crystal growth varies over small space and time scales and is likely controlled by the terrain beneath a given location and resultant local wind patterns. These results imply that predicting snowpack in the Rockies requires properly representing local wind patterns and crystal growth processes in models.

Heflin, Stella↗
DOE OSTI2024

Tornadoes in Southeast South America: Mesoscale to Planetary-Scale Environments

Abstract A multiscale analysis of the environment supporting tornadoes in southeast South America (SESA) was conducted based on a self-constructed database of 74 reports. Composites of environmental and convective parameters from ERA5 were generated relative to tornado events. The distribution of the reported tornadoes maximizes over the Argentine plains, while events are rare close to the Andes and south of Sierras de Córdoba. Events are relatively common in all seasons except in winter. Proximity environment evolution shows enhanced instability, deep-layer vertical wind shear, storm-relative helicity, reduced convective inhibition, and a lowered lifting condensation level before or during the development of tornadic storms in SESA. No consistent signal in low-level wind shear is seen during tornado occurrence. However, a curved hodograph with counterclockwise rotation is present. The Significant Tornado Parameter (STP) is also maximized prior to tornadogenesis, most strongly associated with enhanced CAPE. Differences in the convective environment between tornadoes in SESA and the U.S. Great Plains are discussed. On the synoptic scale, tornado events are associated with a strong anomalous trough crossing the southern Andes that triggers lee cyclogenesis, subsequently enhancing the South American low-level jet (SALLJ) that increases moisture advection to support deep convection. This synoptic trough also enhances vertical shear that, along with enhanced instability, sustains organized convection capable of producing tornadic storms. At planetary scales, the tornadic environment is modulated by Rossby wave trains that appear to be forced by convection near northern Australia. Madden–Julian oscillation phase 3 preferentially occurs 1–2 weeks ahead of tornado occurrence. Significance Statement The main goal of this study is to describe what atmospheric conditions (from local to global scales) are present prior to and during tornadic storms impacting southeast South America (SESA). Increasing potential for deep convection, wind shear, and potential for rotating updrafts, as well as reducing convective inhibition and cloud-base height, are predominant a few hours before and during the events in connection to low-level northerly winds enhancing moisture transport to the region. Remote convective activity near northern Australia appears to influence large-scale atmospheric circulation that subsequently triggers convective storms supporting tornadogenesis 1–2 weeks later in SESA. Our findings highlight the importance of accounting for atmospheric processes occurring at different scales to understand and predict tornado occurrences.

Meteorology & Atmospheric Sciences↗
DOE OSTI2023

Evaluation of an open forecasting challenge to assess skill of West Nile virus neuroinvasive disease prediction

Abstract Background West Nile virus (WNV) is the leading cause of mosquito-borne illness in the continental USA. WNV occurrence has high spatiotemporal variation, and current approaches to targeted control of the virus are limited, making forecasting a public health priority. However, little research has been done to compare strengths and weaknesses of WNV disease forecasting approaches on the national scale. We used forecasts submitted to the 2020 WNV Forecasting Challenge, an open challenge organized by the Centers for Disease Control and Prevention, to assess the status of WNV neuroinvasive disease (WNND) prediction and identify avenues for improvement. Methods We performed a multi-model comparative assessment of probabilistic forecasts submitted by 15 teams for annual WNND cases in US counties for 2020 and assessed forecast accuracy, calibration, and discriminatory power. In the evaluation, we included forecasts produced by comparison models of varying complexity as benchmarks of forecast performance. We also used regression analysis to identify modeling approaches and contextual factors that were associated with forecast skill. Results Simple models based on historical WNND cases generally scored better than more complex models and combined higher discriminatory power with better calibration of uncertainty. Forecast skill improved across updated forecast submissions submitted during the 2020 season. Among models using additional data, inclusion of climate or human demographic data was associated with higher skill, while inclusion of mosquito or land use data was associated with lower skill. We also identified population size, extreme minimum winter temperature, and interannual variation in WNND cases as county-level characteristics associated with variation in forecast skill. Conclusions Historical WNND cases were strong predictors of future cases with minimal increase in skill achieved by models that included other factors. Although opportunities might exist to specifically improve predictions for areas with large populations and low or high winter temperatures, areas with high case-count variability are intrinsically more difficult to predict. Also, the prediction of outbreaks, which are outliers relative to typical case numbers, remains difficult. Further improvements to prediction could be obtained with improved calibration of forecast uncertainty and access to real-time data streams (e.g. current weather and preliminary human cases). Graphical Abstract

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2021

Remarkably coherent population structure for a dominant Antarctic Chlorobium species

Background: In Antarctica, summer sunlight enables phototrophic microorganisms to drive primary production, thereby “feeding” ecosystems to enable their persistence through the long, dark winter months. In Ace Lake, a stratified marine-derived system in the Vestfold Hills of East Antarctica, a Chlorobium species of green sulphur bacteria (GSB) is the dominant phototroph, although its seasonal abundance changes more than 100-fold. Here, we analysed 413 Gb of Antarctic metagenome data including 59 Chlorobium metagenome-assembled genomes (MAGs) from Ace Lake and nearby stratified marine basins to determine how genome variation and population structure across a 7-year period impacted ecosystem function. Results: A single species, Candidatus Chlorobium antarcticum (most similar to Chlorobium phaeovibrioides DSM265) prevails in all three aquatic systems and harbours very little genomic variation (≥ 99% average nucleotide identity). A notable feature of variation that did exist related to the genomic capacity to biosynthesize cobalamin. The abundance of phylotypes with this capacity changed seasonally ~ 2-fold, consistent with the population balancing the value of a bolstered photosynthetic capacity in summer against an energetic cost in winter. The very high GSB concentration (> 10 8 cells ml –1 in Ace Lake) and seasonal cycle of cell lysis likely make Ca. Chlorobium antarcticum a major provider of cobalamin to the food web. Analysis of Ca. Chlorobium antarcticum viruses revealed the species to be infected by generalist (rather than specialist) viruses with a broad host range (e.g., infecting Gammaproteobacteria) that were present in diverse Antarctic lakes. The marked seasonal decrease in Ca. Chlorobium antarcticum abundance may restrict specialist viruses from establishing effective lifecycles, whereas generalist viruses may augment their proliferation using other hosts. Conclusion: The factors shaping Antarctic microbial communities are gradually being defined. In addition to the cold, the annual variation in sunlight hours dictates which phototrophic species can grow and the extent to which they contribute to ecosystem processes. The Chlorobium population studied was inferred to provide cobalamin, in addition to carbon, nitrogen, hydrogen, and sulphur cycling, as critical ecosystem services. The specific Antarctic environmental factors and major ecosystem benefits afforded by this GSB likely explain why such a coherent population structure has developed in this Chlorobium species.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Data from Managing Flowering Time in Miscanthus and Sugarcane to Facilitate Intra- and Intergeneric Crosses

Miscanthus is a close relative of saccharum and a potentially valuable genetic resource for improving sugarcane. Differences in flowering time within and between miscanthus and saccharum hinders intra- and interspecific hybridizations. A series of greenhouse experiments were conducted over three years to determine how to synchronize flowering time of saccharum and miscanthus genotypes. We found that day length was an important factor influencing when miscanthus and saccharum flowered. Sugarcane could be induced to flower in a central Illinois greenhouse using supplemental lighting to reduce the rate at which days shortened during the autumn and winter to 1 min d-1, which allowed us to synchronize the flowering of some sugarcane genotypes with Miscanthus genotypes primarily from low latitudes. In a complementary growth chamber experiment, we evaluated 33 miscanthus genotypes, including 28 M. sinensis , 2 M. floridulus , and 3 M. ×giganteus collected from 20.9° S to 44.9° N for response to three day lengths (10 h, 12.5 h, and 15 h). High latitude-adapted M. sinensis flowered mainly under 15 h days, but unexpectedly, short days resulted in short, stocky plants that did not flower; in some cases, flag leaves developed under short days but heading did not occur. In contrast, for M. sinensis and M. floridulus from low latitudes, shorter day lengths typically resulted in earlier flowering, and for some low latitude genotypes, 15 h days resulted in no flowering. However, the highest ratio of reproductive shoots to total number of culms was typically observed for 12.5 h or 15 h days. Latitude of origin was significantly associated with culm length, and the shorter the days, the stronger the relationship. Nearly all entries achieved maximal culm length under the 15 h treatment, but the nearer to the equator an accession originated, the less of a difference in culm length between the short-day treatments and the 15 h day treatment. Under short days, short culms for high-latitude accessions was achieved by different physiological mechanisms for M. sinensis genetic groups from the mainland in comparison to those from Japan; for mainland accessions, the mechanism was reduced internode length, whereas for Japanese accessions the phyllochron under short days was greater than under long days. Thus, for M. sinensis , short days typically hastened floral induction, consistent with the expectations for a facultative short-day plant. However, for high latitude accessions of M. sinensis , days less than 12.5 h also signaled that plants should prepare for winter by producing many short culms with limited elongation and development; moreover, this response was also epistatic to flowering. Thus, to flower M. sinensis that originates from high latitudes synchronously with sugarcane, the former needs day lengths >12.5 h (perhaps as high as 15 h), whereas that the latter needs day lengths <12.5 h.

Feedstock Production↗