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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 397 records · Page 22
All sourcesNASA NTRSDOE OSTI
DOE OSTI2025

Impact of Storage Conditions on the Quality and Viability of Switchgrass as a Bioenergy Crop

With growing energy demands and climate concerns, advancements in bioenergy have become imperative. Biofuels promote energy independence, reduce fossil fuel reliance, and cut greenhouse gas emissions. Switchgrass (Panicum virgatumis) is an ideal bioenergy crop due to its ability to thrive on marginal lands unsuitable for food crops and its drought tolerance, rendering it a low-maintenance, high-yield option. In the bioenergy industry, energy crops are typically stored to facilitate supply chain management and ensure a continuous supply despite seasonal availability. However, the effective utilization of bioenergy crops is typically contingent upon addressing the challenges associated with biomass storage. These challenges include high moisture content that promotes biological degradation of the biomass leading to increased risk of pathogenic microbes, and chemical degradation that increases the ratio of inconvertible, inorganic materials. These issues lead to a reduction of feedstock value, diminishing the biomass-to-biofuel conversion efficacy, making switchgrass and other bioenergy crops less effective as fuel sources. This project aims to improve the storage of purpose-grown energy crops. Aerobic storage trials were conducted under varying moisture contents to stimulate real-world environmental exposure. Switchgrass samples were rewetted to 30% or 35% and stored in a bioreactor for approximately one month, or until cellular respiration ceased. Degradation indicators, such as dry matter loss, temperature changes, and cellular respiration, were measured throughout this process. Samples for compositional analysis, 16S, and ITS were taken at three different time points: before, during, and after storage, to monitor changes in biomass, microbial communities, and metabolites over time. Preliminary data indicate that dry matter loss is proportional to cellular respiration, with higher moisture content (35%) leading to higher temperatures and elevated dry matter loss. Compositional analysis and microbial community analysis are in progress. This research will provide a comprehensive understanding of storage, helping to identify stability factors in energy crops and improve best management practices for biomass producers.

09 - BIOMASS FUELS↗
DOE OSTI2022

Multifunctional Charge and Hydrogen-Bond Effects of Second-Sphere Imidazolium Pendants Promote Capture and Electrochemical Reduction of CO 2 in Water Catalyzed by Iron Porphyrins

Microenvironments tailored by multifunctional secondary coordination sphere groups can enhance catalytic performance at primary metal active sites in natural systems. In this work, we capture this biological concept in synthetic systems by developing a family of iron porphyrins decorated with imidazolium (im) pendants for the electrochemical CO 2 reduction reaction (CO 2 RR), which promotes multiple synergistic effects to enhance CO 2 RR and enables the disentangling of second-sphere contributions that stem from each type of interaction. Fe-ortho-im(H), which poises imidazolium units featuring both positive charge and hydrogen-bond capabilities proximal to the active iron center, increases CO 2 binding affinity by 25-fold and CO 2 RR activity by 2000-fold relative to the parent Fe tetraphenylporphyrin (Fe-TPP). Comparison with monofunctional analogs reveals that through-space charge effects have a greater impact on catalytic CO 2 RR performance compared to hydrogen bonding in this context.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗
DOE OSTI2022

Space flight associated changes in astronauts’ plasma-derived small extracellular vesicle microRNA: Biomarker identification

This pilot study suggests relatively short (median 12 days long) low-Earth orbit (LEO) spaceflight induces changes in circulating plasma small extracellular vesicle (sEV) microRNA expression. Normalization of small RNA sequencing (sRNAseq) data and quantitative polymerase chain reaction (qPCR) validation confirmed miR-4732-3p is significantly upregulated up to 3 days post-landing, and enrichment analysis suggests this miRNA is expressed in various central nervous system tissues and hematopoietic cells and may be linked to different organ disorders.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2023

Structural Determinants of the Binding and Activation of Estrogen Receptor α by Phenolic Thieno[2,3- d ]pyrimidines

Synthetic, structural, and computational approaches were used to solve the puzzle as to how a phenolic nonsteroidal estrogen 1 with only a single H-bond to its receptor was more potent than an isomer 2 which formed an intricate network of H-bonds. Synthesis of a series of substituted phenols revealed that pK a was not a determinant of estrogenic activity. First-principles calculation also failed to explain the difference in activity of 1 and 2. Molecular dynamics revealed that 1 formed a more stable receptor complex compared to 2, which may explain its increased activity despite forming fewer apparent H-bonds with the protein.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Novel small molecule inhibitor of Kpnβ1 induces cell cycle arrest and apoptosis in cancer cells

Karyopherin beta 1 (Kpnβ1) is a major nuclear import receptor that mediates the import of cellular cargoes into the nucleus. Recently it has been shown that Kpnβ1 is highly expressed in several cancers, and its inhibition by siRNA induces apoptotic cancer cell death, while having little effect on non-cancer cells. This study investigated the effect of a novel small molecule, Inhibitor of Nuclear Import-60 (INI-60), on cancer cell biology, as well as nuclear import activities associated with Kpnβ1, and cancer progression in vivo using cervical and oesophageal cancer cell lines. INI-60 treatment resulted in the inhibition of cancer cell proliferation, colony formation, migration and invasion, and induced a G1/S cell cycle arrest, followed by cancer cell death via apoptosis. Non-cancer cells were minimally affected by INI-60 at concentrations that inhibited cancer cells. INI-60 treatment altered the localisation of Kpnβ1 and its cargoes, NFκB/p65, NFAT and AP-1, and the overexpression of Kpnβ1 reduced INI-60 cytotoxicity. INI-60 also inhibited KYSE 30 oesophageal cancer cell line growth in vivo. Taken together, these results show that INI-60 inhibits the nuclear import of Kpnβ1 cargoes and interferes with cancer cell biology. INI-60 presents as a potential therapeutic approach for cancers of different tissue origins and warrants further investigation as a novel anti-cancer agent.

60 APPLIED LIFE SCIENCES↗
DOE OSTI2020

Manipulation of the Gut Microbiome Alters Acetaminophen Biodisposition in Mice

The gut microbiota is a vast and diverse microbial community that has co-evolved with its host to perform a variety of essential functions involved in the utilization of nutrients and the processing of xenobiotics. Shifts in the composition of gut microbiota can disturb the balance of organisms which can infuence the biodisposition of orally administered drugs. To determine how changes in the gut microbiome can alter drug disposition, the pharmacokinetics (PK), and biodistribution of acetaminophen were assessed in C57Bl/6 mice after treatment with the antibiotics ciprofoxacin, amoxicillin, or a cocktail of ampicillin/neomycin. Altered PK, and excretion profles of acetaminophen were observed in antibiotic exposed animals. Plasma C max was signifcantly decreased in antibiotic treated animals suggesting decreased bioavailability. Urinary metabolite profles revealed decreases in acetaminophen-sulfate metabolite levels in both the amoxicillin and ampicillin/neomycin treated animals. The ratio between urinary and fecal excretion was also altered in antibiotic treated animals. Analysis of gut microbe composition revealed that changes in microbe content in antibiotic treated animals was associated with changes in acetaminophen biodisposition. These results suggest that exposure to amoxicillin or ampicillin/neomycin can alter the biodisposition of acetaminophen and that these alterations could be due to changes in gut microbiome composition.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2025

An Innovative High Throughput Genome Releaser for Rapid and Efficient PCR Screening

High-throughput PCR screening is vital in synthetic biology and metabolic engineering as it allows researchers to rapidly analyze and detect numerous targeted genetic mutation in the genome. Current challenges for high-throughput PCR screening in synthetic biology include efficiently preparing genomic DNA, optimizing protocols for diverse sample types, managing contamination risks, and effectively analyzing the large volumes of data generated while ensuring consistent and accurate results. In this study, we present the development of a High Throughput Genome Releaser (HTGR), an innovative device addressing common challenges in screening PCR. This genome DNA releaser is designed based on a squash method for rapid, cost-effective, and efficient DNA release, optimized for subsequent PCR reactions. After experimenting with various synthetic materials, we selected a plastic that closely replicates the smooth surface and compression properties of microscope slides, ensuring reliable performance. We engineered a device featuring a 96-Well Plate and a shear applicator, operable both manually and automatically, and compatible with standard liquid-handling robot platform. This compatibility enhances ease of use in high-throughput PCR workflows. Additionally, we developed software to support its automatic functions. Our results demonstrated that the specially engineered 96-Well Plate and HTGR can effectively squash fungal spores , which release enough genome DNA for PCR screening. The genome releaser facilitates the preparation of PCR-amplifiable genomic DNA substrate from 96 samples within minutes, eliminates the need for extraction buffers, and is adaptable to a wide range of microorganisms and cells, which could significantly advance biomanufacturing processes.

Yuan, Guoliang [BATTELLE (PACIFIC NW LAB)]↗
DOE OSTI2023

Electron Scattering from 1-Methyl-5-Nitroimidazole: Cross-Sections for Modeling Electron Transport through Potential Radiosensitizers

In this study, we present a complete set of electron scattering cross-sections from 1-Methyl-5-Nitroimidazole (1M5NI) molecules for impact energies ranging from 0.1 to 1000 eV. This information is relevant to evaluate the potential role of 1M5NI as a molecular radiosensitizers. The total electron scattering cross-sections (TCS) that we previously measured with a magnetically confined electron transmission apparatus were considered as the reference values for the present analysis. Elastic scattering cross-sections were calculated by means of two different schemes: The Schwinger multichannel (SMC) method for the lower energies (below 15 eV) and the independent atom model-based screening-corrected additivity rule with interferences (IAM-SCARI) for higher energies (above 15 eV). The latter was also applied to calculate the total ionization cross-sections, which were complemented with experimental values of the induced cationic fragmentation by electron impact. Double differential ionization cross-sections were measured with a reaction microscope multi-particle coincidence spectrometer. Using a momentum imaging spectrometer, direct measurements of the anion fragment yields and kinetic energies by the dissociative electron attachment are also presented. Cross-sections for the other inelastic channels were derived with a self-consistent procedure by sampling their values at a given energy to ensure that the sum of the cross-sections of all the scattering processes available at that energy coincides with the corresponding TCS. This cross-section data set is ready to be used for modelling electron-induced radiation damage at the molecular level to biologically relevant media containing 1M5NI as a potential radiosensitizer. Nonetheless, a proper evaluation of its radiosensitizing effects would require further radiobiological experiments.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2025

Finch: Toxicity Dose Response Curve Prediction of Chemical Compounds and Mixtures

A paradigm shift in chemical risk assessment is emphasizing mixture testing over single compound analysis, eliminating animal testing, and adopting advanced modeling approaches to understand mixture activity profiles. However, existing computational models largely focus on single chemicals, with few effective solutions for modeling complex mixtures that account for synergistic or antagonistic effects and multiple Modes of Action (MoA). Conventional methods like concentration addition (CA) and independent action (IA) are insufficient for this task as they are designed for simplistic interactions and struggle to account for the dynamic and multifaceted nature of chemical mixtures, such as overlapping MoA and non-linear interactions. Finch offers a novel approach utilizing deep learning (DL) embeddings and multi-task quantitative structure-activity relationship (QSAR) models to improve chemical exposure prediction. By leveraging molecular descriptors, physiochemical properties, and large language model (LLM) embeddings from SMILES inputs, Finch preserves critical information in a latent space thereby enhancing predictive accuracy. The multi-task learning aspect of Finch is highly advantageous, as it simultaneously optimizes multiple loss functions, leveraging all available data across tasks to develop generalized representations that effectively capture complex ingredient interactions within mixtures.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2026

Quantitative Evaluation of Potassium Iodide Implementation Strategies for Emergency Preparedness and Response

This study evaluates the effectiveness of potassium iodide (KI) distribution strategies in mitigating exposure to radioiodine during severe nuclear power plant accidents. This analysis quantitatively compares various KI distribution methods (pre-distributed versus stockpiles), including scenarios with and without KI administration. The results indicate that differences in distribution strategies impact the projected thyroid dose by at least an order of magnitude. The results also indicate that the timing of KI administration is critical, as expected. For scenarios involving delayed releases of significant quantities of radionuclides, evacuation is the most effective protection strategy regardless of KI distribution method. For scenarios involving rapid releases, retrieving KI from stockpiles can have a detrimental effect. Pre-distributed KI is potentially the most effective approach when used as a supplement to evacuation and sheltering. However, these model results are based on idealized conditions for KI distribution and administration; the actual benefits of KI prophylaxis are likely to be less than estimated in this report due to many variables. The results highlight the importance of considering the cost and rigor of different distribution programs and public compliance with emergency instructions. This report includes suggested research to explore KI distribution plans for advanced reactors.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

2020 State of the Science Report, Chapter 2: Marine Renewable Energy: Environmental Effects and Monitoring Strategies

As we learn more about interactions between marine renewable energy (MRE) devices, the animals and habitats near them, and the oceanographic processes with which they interact, we need to clarify the language used to discuss those interactions. For example, if an MRE device or system negatively affected a number of animals, we could say that the device or the system of foundations, anchors, and mooring lines had an impact on the population, and take steps to avoid the impact or, in some cases, mitigate the impact. However, at this stage in MRE development, there are few, if any, cases in which a negative impact has been observed or measured. Instead, we are developing the building blocks that support investigations of interactions and potential impacts. https://tethys.pnnl.gov/publications/state-of-the-science-2020-chapter-2-environmental-effects

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2024

East Tennessee Technology Park Biological Monitoring and Abatement Program - 2024 Fiscal Year Report

In FY 2024, the East Tennessee Technology Park’s (ETTP’s) Biological Monitoring and Abatement Program (BMAP) consisted of two tasks that reflect different but complementary approaches to evaluating the effects of ETTP effluents on the ecological integrity of waters near ETTP. These tasks included (1) fish and clam bioaccumulation monitoring and (2) fish and benthic macroinvertebrate species richness and density monitoring. The sampling and analysis requirements for the ETTP BMAP in FY 2024 are outlined in the sampling and analysis plan (UCOR 2023).

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

HIV Env assembling is tightly modulated by lipid composition and cytoplasmic tail integrity

HIV envelope glycoprotein (Env) is a homotrimeric transmembrane protein which binds to receptors CD4, CCR5- CXCR4, leading to a cascade of conformational changes ultimately resulting in the entrance of the virus into the host cell. Its whole structure comprises an extracellular region, a transmembrane domain and a cytoplasmic region. While many efforts are carried in order to develop an effective vaccine specifically targeting the extracellular domain, less efforts are focus into regions close to the transmembrane region; mostly limited by the lack of structural knowledge within this domain. Thus, it is desirable to have a molecular description of the trimeric association of the transmembrane domain, as well as the membrane properties affecting their structure. We have carried molecular dynamic (MD) simulations of HIV transmembrane region in different lipid environments, mimicking the complex viral membrane. Our results indicate that the lipid environment heavily affects the dynamics and association of the transmembrane helices, modulating its structure. In addition, we have investigated the effect of the cytoplasmic tail (CT). Unexpectedly, this region has a tremendous effect on the lateral organization of the transmembrane. These results clearly highlights the importance of this region in the overall structure of the Env protein and point towards its key role for the in-silico design of effective vaccines towards this domain.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2021

Life cycle of carbon in macroalgae for various products

This paper seeks to understand the life cycle and permanence of carbon sequestration for the many possible products of offshore cultivated macroalgae, compared to natural growth, habitat restoration, and intentional sinking. The paper will systematically review existing life cycle analyses (LCAs) for various macroalgae products to identify information gaps and compare the carbon sequestration potential throughout each product life cycle. The sequestration potential of macroalgae is well documented (e.g. Chung et al., 2011; Krause-Jensen & Duarte, 2016) but the permanence of the capture is not understood for harvested macroalgae or end products, which may or may not release the stored carbon dioxide in processing or consumption. This information is necessary to avoid overestimating the benefit and impacts of federal investment in large-scale seaweed aquaculture. The goal of this report is to: 1) Review published LCAs for various macroalgae products and uses; 2) Identify knowledge gaps (experiments and monitoring) to understand the flow of carbon on various time scales; 3) Develop preliminary ranking of macroalgae products by carbon capture effectiveness and permanence.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2020

Bioenergy Consortia: The Spirit of National Laboratory Collaboration

The U.S. Department of Energy’s (DOE’s) National Laboratories collaborate on cutting-edge research and development (R&D) projects through the use of multi-lab consortia. DOE’s Office of Energy Efficiency’s Bioenergy Technologies Office (BETO) funds seven bioenergy industry consortia across the United States. Each bioenergy consortium is devoted to advancing technologies needed to drive the expansion of competitive, cost-effective, and scalable fuels and products made from renewable biomass.

ChemCatBio, biological engineering↗