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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 397 records · Page 22
All sourcesNASA NTRSDOE OSTI
DOE OSTI2021

Evolutionary Diversification of Host-Targeted Bartonella Effectors Proteins Derived from a Conserved FicTA Toxin-Antitoxin Module

Proteins containing a FIC domain catalyze AMPylation and other post-translational modifications (PTMs). In bacteria, they are typically part of FicTA toxin-antitoxin modules that control conserved biochemical processes such as topoisomerase activity, but they have also repeatedly diversified into host-targeted virulence factors. Among these, Bartonella effector proteins (Beps) comprise a particularly diverse ensemble of FIC domains that subvert various host cellular functions. However, no comprehensive comparative analysis has been performed to infer molecular mechanisms underlying the biochemical and functional diversification of FIC domains in the vast Bep family. Here, we used X-ray crystallography, structural modelling, and phylogenetic analyses to unravel the expansion and diversification of Bep repertoires that evolved in parallel in three Bartonella lineages from a single ancestral FicTA toxin-antitoxin module. Our analysis is based on 99 non-redundant Bep sequences and nine crystal structures. Inferred from the conservation of the FIC signature motif that comprises the catalytic histidine and residues involved in substrate binding, about half of them represent AMP transferases. A quarter of Beps show a glutamate in a strategic position in the putative substrate binding pocket that would interfere with triphosphate-nucleotide binding but may allow binding of an AMPylated target for deAMPylation or another substrate to catalyze a distinct PTM. The β-hairpin flap that registers the modifiable target segment to the active site exhibits remarkable structural variability. The corresponding sequences form few well-defined groups that may recognize distinct target proteins. The binding of Beps to promiscuous FicA antitoxins is well conserved, indicating a role of the antitoxin to inhibit enzymatic activity or to serve as a chaperone for the FIC domain before translocation of the Bep into host cells. Taken together, our analysis indicates a remarkable functional plasticity of Beps that is mostly brought about by structural changes in the substrate pocket and the target dock. These findings may guide future structure–function analyses of the highly versatile FIC domains.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

Catching Tidal Dwarf Galaxies at a Later Evolutionary Stage with ALFALFA

We present deep optical imaging and photometry of four objects classified as “Almost-Dark” galaxies in the Arecibo Legacy Fast Arecibo L-band Feed Array (ALFALFA) survey because of their gas-rich nature and extremely faint or missing optical emission in existing catalogs. They have H I masses of 10 7 –10 9 M ⊙ and distances of ~9–100 Mpc. Observations with the WIYN 3.5 m telescope and One Degree Imager reveal faint stellar components with central surface brightnesses of ~24–25 m - ag arcsec 2 in the g band. We also present the results of H I synthesis observations with the Westerbork Synthesis Radio Telescope. These Almost-Dark galaxies have been identified as possible tidal dwarf galaxies (TDGs) based on their proximity to one or more massive galaxies. We demonstrate that AGC 229398 and AGC 333576 likely have the low dark matter content and large effective radii representative of TDGs. They are located much farther from their progenitors than previously studied TDGs, suggesting they are older and more evolved. AGC 219369 is likely dark matter dominated, while AGC 123216 has a dark matter content that is unusually high for a TDG, but low for a normal dwarf galaxy. We consider possible mechanisms for the formation of the TDG candidates such as a traditional major merger scenario and gas ejection from a high-velocity flyby. Blind H I surveys like ALFALFA enable the detection of gas-rich, optically faint TDGs that can be overlooked in other surveys, thereby providing a more complete census of the low-mass galaxy population and an opportunity to study TDGs at a more advanced stage of their life cycle.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

Stability of Cool Cores during Galaxy Cluster Growth: A Joint Chandra/SPT Analysis of 67 Galaxy Clusters along a Common Evolutionary Track Spanning 9 Gyr

We present the results of a joint analysis of Chandra X-ray and South Pole Telescope (SPT) Sunyaev–Zel’dovich (SZ) observations targeting the first sample of galaxy clusters at 0.3 < z < 1.3, selected to be the progenitors of well-studied nearby clusters based on their expected accretion rate. We develop a new procedure in order to tackle the analysis challenge that is estimating the intracluster medium (ICM) properties of low-mass and high-redshift clusters with ~150 X-ray counts. One of the dominant sources of uncertainty on the ICM density profile estimated with a standard X-ray analysis with such shallow X-ray data is due to the systematic uncertainty associated with the ICM temperature obtained through the analysis of the background-dominated X-ray spectrum. We show that we can decrease the uncertainty on the density profile by a factor varying between 2 and 8 with a joint deprojection of the X-ray surface brightness profile measured by Chandra and the SZ-integrated Compton parameter available in the SPT cluster catalog. We apply this technique to the whole sample of 67 clusters in order to track the evolution of the ICM core density during cluster growth. We confirm that the evolution of the gas density profile is well modeled by the combination of a fixed core and a self-similarly evolving non-cool-core profile. We show that the fraction of cool cores in this sample is remarkably stable with redshift although clusters have gained a factor of ~4 in total mass over the past ~9 Gyr.

79 ASTRONOMY AND ASTROPHYSICS↗