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At least 397 records · Page 22

Annual Research Briefs

This report contains the 1997 annual progress reports of the research fellows and students supported by the Center for Turbulence Research (CTR). Titles include: Invariant modeling in large-eddy simulation of turbulence; Validation of large-eddy simulation in a plain asymmetric diffuser; Progress in large-eddy simulation of trailing-edge turbulence and aeronautics; Resolution requirements in large-eddy simulations of shear flows; A general theory of discrete filtering for LES in complex geometry; On the use of discrete filters for large eddy simulation; Wall models in large eddy simulation of separated flow; Perspectives for ensemble average LES; Anisotropic grid-based formulas for subgrid-scale models; Some modeling requirements for wall models in large eddy simulation; Numerical simulation of 3D turbulent boundary layers using the V2F model; Accurate modeling of impinging jet heat transfer; Application of turbulence models to high-lift airfoils; Advances in structure-based turbulence modeling; Incorporating realistic chemistry into direct numerical simulations of turbulent non-premixed combustion; Effects of small-scale structure on turbulent mixing; Turbulent premixed combustion in the laminar flamelet and the thin reaction zone regime; Large eddy simulation of combustion instabilities in turbulent premixed burners; On the generation of vorticity at a free-surface; Active control of turbulent channel flow; A generalized framework for robust control in fluid mechanics; Combined immersed-boundary/B-spline methods for simulations of flow in complex geometries; and DNS of shock boundary-layer interaction - preliminary results for compression ramp flow.

Spinks, Debra↗

Comparing Global Spray Combustion Characteristics and Local Shot-to-Shot Variations in a Reacting n -Heptane Spray

In support of efforts to develop improved models of turbulent spray behavior and combustion in diesel engines, experimental data and analysis must be obtained for guidance and validation. For Reynolds-averaged Navier–Stokes (RANS)-based Computational fluid dynamics (CFD) modeling approaches, representative ensemble average experimental results are important. For high-fidelity models such as large eddy simulations (LES)-based CFD, precise individual experimental results are desirable. However, making comparisons between a given experiment and LES is a challenge since local parameters cannot be directly compared. In this work, an optically accessible constant pressure flow rig (CPFR) is utilized to acquire diesel-like fuel injection and reaction behavior simultaneously with three optical diagnostic techniques: rainbow Schlieren deflectometry (RSD), OH* chemiluminescence (OH*), and two-color pyrometry (2CP). The CPFR allows a large number of repeated injection experiments to be performed for statistical analysis and convergence using ensemble-averaging techniques, while maintaining highly repeatable test conditions. Even for stable test conditions, variations in local turbulent fuel–air mixing introduce variability, which manifests as significant differences in OH* and 2CP results. Experimental measurements of characteristic parameters including liquid and vapor jet penetration, liftoff length, soot temperature and concentration, and turbulent flame speed, along with the shot-to-shot variability of each dataset, are presented and discussed. Finally, a statistical method is utilized to analyze the extent of this variability, and to identify superlative injections within the dataset for discussion and analysis of shot-to-shot variations.

42 ENGINEERING↗

Cloud Modeling Using Field Project Data for the Study of Precipitation Processes

The use of cloud-resolving models (CRMs) in the study of precipitation process and their relation to the large-scale environment can be generally categorized into two approaches. The first approach is so called "cloud ensemble modeling". In this approach, many clouds of different size in various stages of their lifecycles can be present at any model simulation time. Large-scale effects are derived from observations and imposed into the model as the main forcing. The advantage of this approach is that the modeled convection will be forced to have the same intensity, thermodynamic budget and organization as the obserations.This approach will also allow CRMs to perform multi-day or multi-week time integrations. The second approach usually requires initial temperature and water vapor profiles that have a medium to large CAPE, and open lateral boundary conditions are used. The modeled clouds could be termed "self-forced convection". Model improvements, such as in the microphysics, are achieved using the second approach. In cloud ensemble modeling, accurate large-scale advective tendencies for temperature and water vapor are the main forcing for the CRMs. We found that the large-scale advective terms for temperature and water vapor are not always consistent, For example, large-scale forcing could indicate strong drying which would produce cooling in the model through evaporation but not contain large-scale advective heating to compensate. This discrepancy in forcing would cause differences between the observed and modeled latent heating profiles. Good measurements of other quantities (i.e., surface fluxes and radiation) are also required to perform variational objective analysis that computes and minimizes a "cost function" that constrains the difference between the large-scale advective forcing in temperature and water vapor. With self-forced convection, accurate vertical distributions of temperature, moisture (water vapor), and horizontal winds are required. The timing of the measurements relative to cloud development is crucial (i.e., prior to cloud triggering). Microphysical measurements (i.e., the cloud number concentration and size distribution) can also be used in this second approach but are of secondary importance with cloud ensemble modeling. In this paper, data collected during TRMM field campaigns (FCs; i.e., SCSMEX, LBA and KWAJEX) which were aimed at validating TRMM products (i.e., rainfall and the vertical distribution of latent heating) will be used to examine the impact of errors in the initial conditions (e.g.., soundings an large-scale forcing) on simulated rainfall distributions and brightness. Rainfall and precipitations simulated from a CRM will also be compared with those estimated by a schocastic model.

Tao, W.-K.↗

On-demand indistinguishable single photons from an efficient and pure source based on a Rydberg ensemble

Single photons coupled to atomic systems have shown to be a promising platform for developing quantum technologies. Yet a bright on-demand, highly pure, and highly indistinguishable single-photon source compatible with atomic platforms is lacking. In this work, we demonstrate such a source based on a strongly interacting Rydberg system. The large optical nonlinearities in a blockaded Rydberg ensemble convert coherent light into a single collective excitation that can be coherently retrieved as a quantum field. We simultaneously observe a fully single-mode (spectral, temporal, spatial, and polarization) efficiency up to 0.098(2), a detector-background-subtracted g ( 2 ) = 5.0 ( 1.6 ) × <#comment/> 10 − <#comment/> 4 , and indistinguishability of 0.980(7), at an average photon production rate of 1.18 ( 2 ) × <#comment/> 10 4 s − <#comment/> 1 . All of these make this system promising for scalable quantum information applications. Furthermore, we investigate the effects of contaminant Rydberg excitations on the source efficiency and observed single-mode efficiencies up to 0.18(2) for lower photon rates. Finally, recognizing that many quantum information protocols require a single photon in a fully single mode, we introduce metrics that take into account all degrees of freedom to benchmark the performance of on-demand sources.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Ensemble modeling of watershed-scale hydrologic effects of short-rotation woody crop production

Short-rotation woody crop (SRWC) production involves a set of silvicultural practices that aim to produce large volumes of biomass over relatively short time frames. The area over which these practices are employed is likely to increase in the coming decades as the demand for bioenergy increases, but the potential effects of this change in land management, including the hydrologic effects, are largely unknown. Here we outline the results from an ensemble modeling study that was developed to forecast the range of potential hydrological responses to the implementation of SRWC production over areas that are large (>1000 ha) relative to the size of individual clearcuts. The three models, SWAT, MIKE-SHE, and Envision-SRS, a physically based model designed to represent watersheds with dynamic land cover, represent a range of simulation tools that include hydrological response to landcover change. Results suggest that SRWC production will affect the hydrologic balance, primarily through changes in the volume of transpired water associated with the rapidly growing young stands. In particular, average annual actual evapotranspiration (ET) rates tend to decline under SRWC production in response to the less mature vegetation. These reductions in ET are balanced in the hydrological cycle through elevated groundwater recharge, expressed in the model results as elevated annual stream discharge.

09 BIOMASS FUELS↗

Insight into molecular basis and dynamics of full-length CRaf kinase in cellular signaling mechanisms

Raf kinases play key roles in signal transduction in cells for regulating proliferation, differentiation, and survival. Despite decades of research into functions and dynamics of Raf kinases with respect to other cytosolic proteins, understanding Raf kinases is limited by the lack of their full-length structures at the atomic resolution. Here, we present the first model of the full-length CRaf kinase obtained from artificial intelligence/machine learning algorithms with a converging ensemble of structures simulated by large-scale temperature replica exchange simulations. Our model is validated by comparing simulated structures with the latest cryo-EM structure detailing close contacts among three key domains and regions of the CRaf. Our simulations identify potentially new epitopes of intramolecule interactions within the CRaf and reveal a dynamical nature of CRaf kinases, in which the three domains can move back and forth relative to each other for regulatory dynamics. The dynamic conformations are then used in a docking algorithm to shed insight into the paradoxical effect caused by vemurafenib in comparison with a paradox breaker PLX7904. In this study, we propose a model of Raf-heterodimer/KRas-dimer as a signalosome based on the dynamics of the full-length CRaf.

59 BASIC BIOLOGICAL SCIENCES↗

Unraveling the implications of finite specimen size on the interpretation of dynamic experiments for polycrystalline aluminum through direct numerical simulations

Normal and Pressure-shear plate impact (NPI and PSPI) experiments are popular experimental techniques for studying the mean-field macroscopic behavior of polycrystalline metals under high-rate dynamic loading. However, since both configurations rely upon geometry for subjecting the specimen to high strain rates, these experiments often involve a limited specimen size. Moreover, because of the inherent heterogeneities present within polycrystalline metals, it is difficult to ascertain if the size of the specimen and/or regions where measurements are made are sufficiently large for making representative inferences about the mean-field macroscopic properties from single-point velocity measurements. In the present study, we quantify the expected measurement variability on observable point measurements in NPI and PSPI experiments by carrying out direct numerical simulations (DNS) of statistically representative polycrystalline microstructures subjected to dynamic compression and compression-shear loading. In particular, we consider the role of specific material heterogeneities (e.g. the grain-to-grain difference in size, crystallographic orientation) on dispersion in the normal and transverse particle velocity records and on local fluctuations in key state variables (e.g. velocity, accumulated plastic strain) by incorporating these effects directly into a representative synthetic microstructure geometry and crystalline description of pure polycrystalline aluminum. The form of the present study is a large parametric investigation, consisting of ten ensembles of one hundred simulations. Each of the thousand simulations reflects a randomly realized synthetic microstructure in one of five cases of decreasing average grain size for the two loading configurations. Our analysis of the DNS results demonstrates that for both of these experimental configurations, the grain size directly correlates with the coefficient of variation (CV) in simulated point measurements, showing a convergent decrease in CV to zero (i.e. particle velocity record approaches the mean-field value) with decreasing grain size. Remarkably, the magnitude of variations in the particle velocity record is shown to be largest where the deviatoric stresses are most significant. In the case of NPI, this occurs at the elastic and plastic wavefront, whereas, in the case of PSPI, the magnitude of fluctuations are approximately constant throughout the experimental window time. The reasoning for the scatter in particle velocity due to the heterogeneous microstructure is demonstrated to be dependent on the mechanisms for accommodating deformation and on the interaction of reflection waves generated at sites of heterogeneities occurring at the scale of grains. Lastly, we develop a power-law description for the magnitude of scattering versus characteristic length, which provides a statistical framework for assessing the required number of grains per characteristic specimen dimension for minimizing scatter within these two experimental configurations (NPI, PSPI).

36 MATERIALS SCIENCE↗

Unraveling the Growth Mechanism of Strongly Confined CsPbBr 3 Perovskite Quantum Dots under Thermodynamic Equilibrium Control

Size-confined lead halide perovskite quantum dots (PQDs) are promising materials for optoelectronic devices. Large quantities of PQDs with high ensemble uniformity are often needed for device fabrication. The thermodynamic-equilibrium-controlled synthesis can produce PQDs with good size and shape uniformity. Unfortunately, scaling up this synthesis often produces unwanted perovskite nanoplatelets (NPLs). To date, the PQD and NPL growth mechanism under thermodynamic equilibrium control remains unexplored. We discovered that the growth of size-confined CsPbBr 3 PQDs is mediated by ultrasmall (~ 2.4 nm) metastable nanoclusters. These nanoclusters can eventually grow into PQDs when sufficient Cs-precursors are provided. Otherwise, the unreacted nanoclusters will self-assemble and fuse into NPLs during the synthesis and/or PQD purification. Furthermore, by controlling the homogeneous growth of nanoclusters, strongly confined (≤ 5 nm) PQDs with high size uniformity can be produced at the gram scale.

77 NANOSCIENCE AND NANOTECHNOLOGY↗

Evaluation of top-down and bottom-up global terrestrial respiration estimates and their mismatch with model simulations

Terrestrial respiration is one of the most poorly understood processes in the global carbon cycle, making respiration predictions uncertain. However, expanding observations and machine learning approaches have led to a proliferation of estimates. We compiled total ecosystem and heterotrophic respiration estimates derived from top-down atmospheric inversions and bottom-up upscaling of ecosystem observations and compared them with dynamic vegetation models (DGVM) simulations over the 1980-2020 period. Our analysis revealed a convergence in mean annual global total ecosystem respiration estimates between top-down 97.1 (± SD 6.8) PgC yr-1 and bottom-up 98.5 (+/-13.4) PgC yr-1, which were both significantly lower than the ensemble mean from DGVMs estimates 133.7 (±4.7) PgC yr-1. We also found similar temporal trends between top-down estimates with a mean of 0.075 (±0.05) PgC yr-2, and bottom-up estimates of 0.05 (±0.05) PgC yr-2, which were 5 to 7 times smaller than the ensemble mean trend of 0.34 PgC yr-2 simulated by DGVMs. Global heterotrophic respiration showed much less agreement, ranging from top-down estimates of 42.7 (±4.0) PgC yr-1 to bottom-up estimates of 51.5 (±4.0) PgC yr-1 and a significantly larger ensemble model mean estimate of 60.8 PgC yr-1 (±1.9). The temporal trends in observation-based bottom-up estimates of heterotrophic respiration of 0.03 PgC yr-2 were five times lower than the model ensemble mean 0.15 PgC yr-2. Large regional disagreements in heterotrophic respiration estimates and simulations were evident in tropical and boreal latitudes. Therefore, improved regional and heterotrophic respiration estimates are necessary to reduce uncertainties regarding the future vulnerability of soil carbon.

Ballantyne, Ashley↗

Full structural ensembles of intrinsically disordered proteins from unbiased molecular dynamics simulations

Abstract Molecular dynamics (MD) simulation is widely used to complement ensemble-averaged experiments of intrinsically disordered proteins (IDPs). However, MD often suffers from limitations of inaccuracy. Here, we show that enhancing the sampling using Hamiltonian replica-exchange MD (HREMD) led to unbiased and accurate ensembles, reproducing small-angle scattering and NMR chemical shift experiments, for three IDPs of varying sequence properties using two recently optimized force fields, indicating the general applicability of HREMD for IDPs. We further demonstrate that, unlike HREMD, standard MD can reproduce experimental NMR chemical shifts, but not small-angle scattering data, suggesting chemical shifts are insufficient for testing the validity of IDP ensembles. Surprisingly, we reveal that despite differences in their sequence, the inter-chain statistics of all three IDPs are similar for short contour lengths (< 10 residues). The results suggest that the major hurdle of generating an accurate unbiased ensemble for IDPs has now been largely overcome.

59 BASIC BIOLOGICAL SCIENCES↗

Semiclassical shell-structure micro-macroscopic approach for the level density

Level density ρ(E,A) is derived for a one-component nucleon system with a given energy E and particle number A within the mean-field semiclassical periodic-orbit theory beyond the saddle-point method of the Fermi gas model. We obtain ρ∝I ν (S)/S ν , with I ν (S) being the modified Bessel function of the entropy S. Within the micro-macro-canonical approximation (MMA), for a small thermal excitation energy U, with respect to rotational excitations E rot , one obtains ν = 3/2 for ρ(E,A). In the case of excitation energy U larger than E rot but smaller than the neutron separation energy, one finds a larger value of ν = 5/2. A role of the fixed spin variables for rotating nuclei is discussed. The MMA level density ρ reaches the well-known grand-canonical ensemble limit (Fermi gas asymptote) for large S related to large excitation energies, and also reaches the finite micro-canonical limit for small combinatorial entropy S at low excitation energies (the constant “temperature” model). Fitting the ρ(E,A) of the MMA to the experimental data for low excitation energies, taking into account shell and, qualitatively, pairing effects, one obtains for the inverse level density parameter K a value which differs essentially from that parameter derived from data on neutron resonances.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Enhancing weak lensing redshift distribution characterization by optimizing the Dark Energy Survey Self-Organizing Map Photo-z method

Characterization of the redshift distribution of ensembles of galaxies is pivotal for large scale structure cosmological studies. In this work, we focus on improving the Self-Organizing Map (SOM) methodology for photometric redshift estimation (SOMPZ), specifically in anticipation of the Dark Energy Survey Year 6 (DES Y6) data. This data set, featuring deeper and fainter galaxies than DES Year 3 (DES Y3), demands adapted techniques to ensure accurate recovery of the underlying redshift distribution. We investigate three strategies for enhancing the existing SOM-based approach used in DES Y3: 1) Replacing the Y3 SOM algorithm with one tailored for redshift estimation challenges; 2) Incorporating $\textit{g}$-band flux information to refine redshift estimates (i.e. using $\textit{griz}$ fluxes as opposed to only $\textit{riz}$); 3) Augmenting redshift data for galaxies where available. These methods are applied to DES Y3 data, and results are compared to the Y3 fiducial ones. Our analysis indicates significant improvements with the first two strategies, notably reducing the overlap between redshift bins. By combining strategies 1 and 2, we have successfully managed to reduce redshift bin overlap in DES Y3 by up to 66$\%$. Conversely, the third strategy, involving the addition of redshift data for selected galaxies as an additional feature in the method, yields inferior results and is abandoned. Our findings contribute to the advancement of weak lensing redshift characterization and lay the groundwork for better redshift characterization in DES Year 6 and future stage IV surveys, like the Rubin Observatory.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Measuring the Mass of the Large Magellanic Cloud with Stellar Streams Observed by S $^{5}$

Stellar streams are excellent probes of the underlying gravitational potential in which they evolve. In this work, we fit dynamical models to five streams in the Southern Galactic hemisphere, combining observations from the Southern Stellar Stream Spectroscopic Survey (S $^{5}$), Gaia EDR3, and the Dark Energy Survey, to measure the mass of the Large Magellanic Cloud (LMC). With an ensemble of streams, we find a mass of the LMC ranging from ∼14–19 × 10$^{10}$ M $_{⊙}$, probed over a range of closest approach times and distances. With the most constraining stream (Orphan–Chenab), we measure an LMC mass of , probed at a closest approach time of 310 Myr and a closest approach distance of 25.4 kpc. This mass is compatible with previous measurements, showing that a consistent picture is emerging of the LMC’s influence on structures in the Milky Way. Using this sample of streams, we find that the LMC’s effect depends on the relative orientation of the stream and LMC at their point of closest approach. To better understand this, we present a simple model based on the impulse approximation and we show that the LMC’s effect depends both on the magnitude of the velocity kick imparted to the stream and the direction of this kick.

79 ASTRONOMY AND ASTROPHYSICS↗

Long-term evolution of 1991 DA: A dynamically evolved extinct Halley-type comet

The long-term dynamical evolution of 21 variational orbits for the intermediate-period asteroid 1991 DA was followed for up to +/-10(exp 5) years from the present. 1991 DA is close to the 2:7 resonance with Jupiter; it has avoided close encounters, within 1 AU, with this planet for at least the past 30,000 years, even at the node crossing. The future evolution typically shows no close encounters with Jupiter within at least 50,000 years. This corresponds to the mean time between node crossings with either Jupiter or Saturn. Close encounters with Saturn and Jupiter lead to a chaotic evolution for the whole ensemble, while secular perturbations cause large-amplitude swings in eccentricity and inclination (the latter covering the range 15 deg approximately less than i approximately less than 85 deg) which correlate with deep excursions of the perihelion distance to values much less than 1 AU. These variations are similar to those found in P/Machholz and a variety of other high-inclination orbits, e.g., P/Hartley-IRAS. We emphasize the connection between the orbital evolution of 1991 DA and that of Halley-type comets. If 1991 DA was once a comet, it is not surprising that it is now extinct.

Hahn, Gerhard↗

Modeling of the Tau and Muon Neutrino-induced Optical Cherenkov Signals from Upward-moving Extensive Air Showers

We present a detailed modeling and computation methodology to determine the optical Cherenkovsignals produced by upward-moving extensive air showers (EASs) induced byτ-leptons and muons,sourced from the interaction of high-energy astrophysical neutrinos interacting in the Earth. Fol-lowing and extending the physics modeling and Cherenkov signal simulations performed in [1], thisscheme encompasses a new, state-of-the-art computation of the muon neutrino propagation insidethe Earth and the contribution to theτ-lepton muon decay channel. The modeling takes into ac-count all possibleτ-lepton decay and muon energy loss channels that feed the optical Cherenkovemission, produced by both tau and muon initiated EASs. The EAS modeling uses the electronenergy, angular, and lateral distributions in the EAS and their evolution as well as the wavelengthdependence of the Cherenkov emission and its atmospheric attenuation. The results presented hereare focused on the detection capabilities of sub-orbital (balloon-borne) and orbital (satellite) basedinstruments. The latter case was calculated for POEMMAato compare to that presented in [1],specifically including the muon-decay channel ofτ-leptons and the muonic EAS Cherenkov signalfrom muon neutrino interactions in the Earth. By detailing all these individual contributions tothe optical Cherenkov emission and detection, we show how the ensemble that includes muonicchannels provides a large detection capability for space-based, high-energy cosmic neutrino detec-tion. Specifically, we show that for neutrino energies∼<10 PeV, the upward-EAS sensitivity due tomuon neutrino interactions in the Earth begin to dominate over that for tau neutrino interactions,effectively extending the neutrino sensitivity to lower energies.

A L Cummings↗

Assimilation of SMAP Products for Improving Streamflow Simulations over Tropical Climate Region—Is Spatial Information More Important Than Temporal Information?

Streamflow is one of the key variables in the hydrological cycle. Simulation and forecasting of streamflow are challenging tasks for hydrologists, especially in sparsely gauged areas. Coarse spatial resolution remote sensing soil moisture products (equal to or larger than 9 km) are often assimilated into hydrological models to improve streamflow simulation in large catchments. This study uses the Ensemble Kalman Filter (EnKF) technique to assimilate SMAP soil moisture products at the coarse spatial resolution of 9 km (SMAP 9 km), and downscaled SMAP soil moisture product at the higher spatial resolution of 1 km (SMAP 1 km), into the Soil and Water Assessment Tool (SWAT) to investigate the usefulness of different spatial and temporal resolutions of remotely sensed soil moisture products in streamflow simulation and forecasting. The experiment was set up for eight catchments across the tropical climate of Vietnam, with varying catchment areas from 267 to 6430 km^2 during the period 2017–2019. We comprehensively evaluated the EnKF-based SWAT model in simulating streamflow at low, average, and high flow. Our results indicated that high-spatial resolution of downscaled SMAP 1 km is more beneficial in the data assimilation framework in aiding the accuracy of streamflow simulation, as compared to that of SMAP 9 km, especially for the small catchments. Our analysis on the impact of observation resolution also indicates that the improvement in the streamflow simulation with data assimilation is more significant at catchments where downscaled SMAP 1 km has fewer missing observations. This study is helpful for adding more understanding of performances of soil moisture data assimilation based hydrological modelling over the tropical climate region, and exhibits the potential use of remote sensing data assimilation in hydrology.

soil moisture↗

Ensemble Simulations on Leadership Computing Systems

Scientific productivity can be enhanced through workflow management tools, relieving large High Performance Computing (HPC) system users from the tedious tasks of scheduling and designing the complex computational execution of scientific applications. This paper presents a study on the usage of ensemble workflow tools to accelerate science using the Summit and Frontier supercomputing systems. The research aims to connect science domain simulations using Oak Ridge Leadership Computing Facility (OLCF) supercomputing platforms with ensemble workflow methods in order to accelerate HPC-enabled discovery and boost scientific impact. We present the coupling, porting and optimization of Radical-Cybertools on three applications: Chroma, NAMD and LAMMPS. The tools augment traditional HPC monolithic runs with a pilot scheduler. Lessons-learned are discussed for physics, biology and materials science applications. We discuss intrinsic limitations of coupling and porting ensemble workflow tools to applications that run on large HPC systems. The origins of technical challenges and their solutions developed during the implementation process are discussed. Data management strategies, OLCF’s policies for ensembles, and natively supported workflow tools are also summarized.

Georgiadou, Antigoni [ORNL] (ORCID:000000020977631↗