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At least 397 records · Page 22

A statistical mechanics framework for polymer chain scission, based on the concepts of distorted bond potential and asymptotic matching

To design increasingly tough, resilient, and fatigue-resistant elastomers and hydrogels, the relationship between controllable network parameters at the molecular level (bond type, non-uniform chain length, entanglement density, etc.) to macroscopic quantities that govern damage and failure must be established. Many of the most successful constitutive models for elastomers have been rooted in statistical mechanical treatments of polymer chains. Typically, such constitutive models have used variants of the freely jointed chain model with rigid links. However, since the free energy state of a polymer chain is dominated by enthalpic bond distortion effects as the chain approaches its rupture point, bond extensibility ought to be accounted for if the model is intended to capture chain rupture. To that end, a new bond potential is supplemented to the freely jointed chain model (as derived in the u FJC framework of Buche and Silberstein (2021) and Buche et al. (2022)), which we have extended to yield a tractable, closed-form model of single chain behavior that should be amenable to continuum-level constitutive model development. Inspired by the asymptotically matched u FJC model response in both the low/intermediate chain force and high chain force regimes, a simple, quasi-polynomial bond potential energy function is derived. This bond potential exhibits harmonic behavior near the equilibrium state and anharmonic behavior for large bond stretches tending to a characteristic energy plateau (akin to the Lennard-Jones and Morse bond potentials). Using this bond potential, approximate yet highly-accurate analytical functions for bond stretch and chain force dependent upon chain stretch are established. Then, using this polymer chain model, a stochastic thermal fluctuation-driven chain rupture framework is developed. This framework is based upon a force-modified tilted bond potential that accounts for distortional bond potential energy, allowing for the derivation and subsequent calculation of the dissipated chain scission energy. Here, the cases of rate-dependent and rate-independent scission are accounted for throughout the rupture framework. The impact of Kuhn segment number on chain rupture behavior is also investigated. The model is fit to single chain mechanical response data collected from atomic force microscopy tensile tests for validation and to glean deeper insight into the molecular physics taking place. Due to their analytical nature, this polymer chain model and the associated rupture framework can in the future be implemented in finite element models accounting for fracture and fatigue in polydisperse elastomer networks.

36 MATERIALS SCIENCE↗

Radiative transition probabilities of neutral and singly ionized Europium estimated by laser-induced breakdown spectroscopy (LIBS)

Laser-induced breakdown spectroscopy (LIBS) is a versatile technique for compositional analysis for solids, liquids, or gasses. LIBS is an asset for the quantitative or qualitative analysis of resource limited materials like actinides and rare earths because it is quasi-nondestructive. Two Eu 2 O 3 pellets were synthesized to be a test and validation set, respectively. Spectral lines identified from the National Institute of Standards and Technology database with fundamental data reported were used to form Saha-Boltzmann plots. The Saha-Boltzmann plots were used to determine the plasma temperatures and electron densities of the laser-induced plasmas for both samples. These Saha-Boltzmann plots were then used to calculate previously unreported transition probabilities associated with identified peaks. Additionally, the transition probabilities presented in this paper provide the capability for calibration free LIBS to be performed more readily on europium samples and the spectroscopic analysis of stellar bodies. Eight previously unreported transition probabilities are presented in this paper; five for Eu I and three for Eu II. The transition probabilities for Eu I ranged from 0.172 to 7.38 × 10 7 s -1 and those for Eu II ranged from 1.56 to 6.75 × 10 7 s -1 .

47 OTHER INSTRUMENTATION↗

Revisiting Bayesian constraints on the transport coefficients of QCD

Multistage models based on relativistic viscous hydrodynamics have proven successful in describing hadron measurements from relativistic nuclear collisions. These measurements are sensitive to the shear and the bulk viscosities of QCD and provide a unique opportunity to constrain these transport coefficients. Bayesian analyses can be used to obtain systematic constraints on the viscosities of QCD, through methodical model-to-data comparisons. In this manuscript, we discuss recent developments in Bayesian analyses of heavy ion collision data. Furthermore, we highlight the essential role of closure tests in validating a Bayesian analysis before comparison with measurements. We discuss the role of the emulator that is used as proxy for the multistage theoretical model. We use an ongoing Bayesian analysis of soft hadron measurements by the JETSCAPE Collaboration as context for the discussion.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

$\gamma$-Unstable Bohr Hamiltonian with sextic potential for odd-A nuclei

We report in this paper, odd-A nuclei in the vibrational to γ-soft transitional region are studied in the collective model, in which the odd-A system is described by the Bohr Hamiltonian with the quasi exactly solvable sextic β-part potential for the even-even core coupled with a single nucleon in a j = 3/2 orbit via the β-independent five-dimensional spin-orbit interaction and the total angular momentum degeneracy breaking term. To test the validity of the coupling scheme, we use the model to reproduce experimentally available level energies and B(E2) values of 187,189,191,193,195 Ir. It is clearly shown from both the level energies and the known B(E2) values for 191,193I r fitted that the model with the β-independent five-dimensional spin-orbit interaction and the total angular momentum degeneracy breaking term seems adequate to describe the low-lying level pattern and the structure of these odd-A nuclei.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

A deep learning-based battery sizing optimization tool for hybridizing generation plants

Hybrid generation and energy storage systems offer the ability to increase flexibility of the combined asset. This flexibility can be used to increase provision of services already provided by the generation asset, such as timing sale of electricity to the energy market during high price periods, and also enable provision of additional services, such as ancillary services or contribute to resource adequacy. From a generation asset owner perspective, the decision to hybridize includes selecting an energy storage system that, among other factors, maximizes financial performance of the energy storage investment. Yet, existing tools to optimize energy storage sizing are either too rudimentary (i.e., based on “rules of thumb”) or too complex to implement (i.e., require specialized engineering and software knowledge and a high-performance computer to run). This work presents a novel deep learning-based battery sizing optimization tool that is designed to help generation asset owners easily assess preliminary sizing considerations for potential battery investments to hybridize their generation facility. The tool uses deep learning to predict revenue over a broad search space of potential battery sizes, estimates capital and operating costs (including accounting for battery degradation), and computes financial performance of each potential battery system investment, recommending a system with maximum financial performance. The tool is tested and validated for hydropower assets. Finally, this tool will help a greater cross-section of industry consider investments in battery systems, increasing their revenue and helping them compete in rapidly evolving electrify markets.

13 HYDRO ENERGY↗

Towards fast and accurate predictions of radio frequency power deposition and current profile via data-driven modelling: applications to lower hybrid current drive

Three machine learning techniques (multilayer perceptron, random forest and Gaussian process) provide fast surrogate models for lower hybrid current drive (LHCD) simulations. A single GENRAY/CQL3D simulation without radial diffusion of fast electrons requires several minutes of wall-clock time to complete, which is acceptable for many purposes, but too slow for integrated modelling and real-time control applications. The machine learning models use a database of more than 16 000 GENRAY/CQL3D simulations for training, validation and testing. Latin hypercube sampling methods ensure that the database covers the range of nine input parameters ( $n_{e0}$ , $T_{e0}$ , $I_p$ , $B_t$ , $R_0$ , $n_{\|}$ , $Z_{{\rm eff}}$ , $V_{{\rm loop}}$ and $P_{{\rm LHCD}}$ ) with sufficient density in all regions of parameter space. The surrogate models reduce the inference time from minutes to $\sim$ ms with high accuracy across the input parameter space.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Advanced surrogate model for electron-scale turbulence in tokamak pedestals

We derive an advanced surrogate model for predicting turbulent transport at the edge of tokamaks driven by electron temperature gradient (ETG) modes. Our derivation is based on a recently developed sensitivity-driven sparse grid interpolation approach for uncertainty quantification and sensitivity analysis at scale, which informs the set of parameters that define the surrogate model as a scaling law. Our model reveals that ETG-driven electron heat flux is influenced by the safety factor q, electron beta β e and normalized electron Debye length λ D , in addition to well-established parameters such as the electron temperature and density gradients. To assess the trustworthiness of our model's predictions beyond training, we compute prediction intervals using bootstrapping. The surrogate model's predictive power is tested across a wide range of parameter values, including within-distribution testing parameters (to verify our model) as well as out-of-bounds and out-of-distribution testing (to validate the proposed model). Overall, validation efforts show that our model competes well with, or can even outperform, existing scaling laws in predicting ETG-driven transport.

fusion plasma↗

Analytic model for neutral penetration and plasma fueling

Neutral atoms recycled from wall interaction interact with confined plasma, thereby refuelling it, most strongly in the region closest to the wall. This occurs near the X-point in diverted configurations, or else near the wall itself in limited configurations. A progression of analytic models is developed for neutral density in the vicinity of a planar or linear source in an ionising domain. First-principles neutral transport simulations with DEGAS2 are used throughout to test the validity and limits of the model when using equivalent sources. The model is further generalised for strong plasma gradients or the inclusion of charge exchange. An important part of the problem of neutral fuelling from recycling is thereby isolated and solved with a closed-form analytic model. A key finding is that charge exchange with the confined plasma can be significantly simplified with a reasonable sacrifice of accuracy by treating it as a loss. The several assumptions inherent to the model (and the simulations with which it is compared) can be adapted according to the particular behaviour of neutrals in the divertor and the manner in which they cross the separatrix.

fusion plasma↗

Comparative Assessment of Pose Prediction Accuracy in RNA–Ligand Docking

Structure-based virtual high-throughput screening is used in early-stage drug discovery. Over the years, docking protocols and scoring functions for protein–ligand complexes have evolved to improve the accuracy in the computation of binding strengths and poses. In the past decade, RNA has also emerged as a target class for new small-molecule drugs. However, most ligand docking programs have been validated and tested for proteins and not RNA. Here, we test the docking power (pose prediction accuracy) of three state-of-the-art docking protocols on 173 RNA–small molecule crystal structures. The programs are AutoDock4 (AD4) and AutoDock Vina (Vina), which were designed for protein targets, and rDock, which was designed for both protein and nucleic acid targets. AD4 performed relatively poorly. For RNA targets for which a crystal structure of a bound ligand used to limit the docking search space is available and for which the goal is to identify new molecules for the same pocket, rDock performs slightly better than Vina, with success rates of 48% and 63%, respectively. However, in the more common type of early-stage drug discovery setting, in which no structure of a ligand–target complex is known and for which a larger search space is defined, rDock performed similarly to Vina, with a low success rate of ~27%. Further, Vina was found to have bias for ligands with certain physicochemical properties, whereas rDock performs similarly for all ligand properties. Thus, for projects where no ligand–protein structure already exists, Vina and rDock are both applicable. However, the relatively poor performance of all methods relative to protein–target docking illustrates a need for further methods refinement.

59 BASIC BIOLOGICAL SCIENCES↗

Local Atomic Structure in Photo-isomerized Ruthenium Sulfur Dioxide Complexes Revealed by Pair Distribution Function Analysis

SO 2 linkage photoisomerization in crystalline ruthenium-based complexes has demonstrated nanophotonic phenomena such as optical switching and nano-optomechanical transduction. Molecular insights into these materials have been explored largely via the characterization of their photoinduced crystal structures via in situ single-crystal X-ray diffraction, known as photocrystallography. Photoinduced molecular disorder is present, which photocrystallography can model to the extent that it is confined within the periodic boundary of a unit cell. However, non-periodic molecular disorder is suspected to exist as well. In situ total scattering experiments were therefore carried out on finely powdered crystals of four ruthenium-sulfur dioxide complexes. Data were modeled using light-minus-dark' difference pair distribution function analysis, which afforded photoinduced structural changes exclusively. This revealed structural features that were first compared against models of photoinduced crystal structures known a priori from photocrystallography. Furthermore, statistical inference was then employed, which evidenced generally good agreement between the total scattering data and the photocrystallographic models, while revealing real differences that are indicative of a structure with only a short-range order. Overall, our findings demonstrate that in situ light-induced total scattering experiments on finely powdered crystals are able to reveal the photoinduced structure. Overall, the evidence suggests that such structure could include a short-range order as well as photocrystallographic content. Our demonstration experiment offers a pathway to develop studies that capture the short-range order in linkage photoisomers, while we have outlined the procedure for testing the validity of associated structural models.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Forecasting Megaelectron-Volt Electrons Inside Earth's Outer Radiation Belt: PreMevE 2.0 Based on Supervised Machine Learning Algorithms

We present the recent progress in upgrading a predictive model for megaelectron-volt (MeV) electrons inside the Earth's outer Van Allen belt. This updated model, called PreMevE 2.0, provides improved forecasts, particularly at outer L-shells, by adding upstream solar wind speeds to the model's input parameter list that originally includes precipitating electrons observed at low Earth orbits and MeV electron fluxes in situ measured by a geosynchronous satellite. Furthermore, based on several kinds of linear and artificial neural networks algorithms, a list of models was constructed, trained, validated, and tested with 42-month MeV electron observations from Van Allen Probes. Out-of-sample test results from these models show that, with optimized model hyperparameters and input parameter combinations, the top performer from each category of models has the similar capability of making reliable 1-day (2-day) forecasts of 1-MeV electron flux distributions with performance efficiency values ~0.87 (~0.82) averaged over the L-shell range of 2.8–6.6, significantly outperforming the previous version of PreMevE particularly at L-shells > ~4.5. Interestingly, the linear regression model is often the most successful when compared to other models, which suggests the relationship between dynamics of trapped 1-MeV electrons and precipitating electrons is dominated by linear components. Results also show that PreMevE 2.0 can reasonably well predict the onsets of MeV electron events in 2-day forecasts. PreMevE 2.0 is designed to be driven by observations from longstanding space infrastructure to make high-fidelity forecasts for MeV electrons, thus can be an invaluable space weather forecasting tool for the future.

79 ASTRONOMY AND ASTROPHYSICS↗

Scaling of Electron Heating by Magnetization During Reconnection and Applications to Dipolarization Fronts and Super-Hot Solar Flares

Electron ring velocity space distributions have previously been seen in numerical simulations of magnetic reconnection exhausts and have been suggested to be caused by the magnetization of the electron outflow jet by the compressed reconnected magnetic fields (Shuster et al., 2014, https://doi. org/10.1002/2014GL060608). Here, we present a theory of the dependence of the major and minor radii of the ring distributions solely in terms of upstream (lobe) plasma conditions, thereby allowing a prediction of the associated temperature and temperature anisotropy of the rings in terms of upstream parameters. We test the validity of the prediction using 2.5-dimensional particle-in-cell (PIC) simulations with varying upstream plasma density and temperature, finding excellent agreement between the predicted and simulated values. We confirm the Shuster et al. suggestion for the cause of the ring distributions, and also find that the ring distributions are located in a region marked by a plateau, or shoulder, in the reconnected magnetic field profile. The predictions of the temperature are consistent with observed electron temperatures in dipolarization fronts, and may provide an explanation for the generation of plasma with temperatures in the 10s of MK in super-hot solar flares. A possible extension of the model to dayside reconnection is discussed. Since ring distributions are known to excite whistler waves, the present results should be useful for quantifying the generation of whistler waves in reconnection exhausts.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

International database of reference gamma spectra for nuclear safeguards applications

Nuclear safeguards missions use gamma spectroscopy as a non-destructive measurement technique for examining nuclear materials. Despite advances in the development of detection equipment as well as software codes, one of the concerns is the lack of well-documented spectra needed to test and validate isotopic analysis codes for their applicability. To address this need, this work introduces IDB, an international database of the reference gamma spectra of uranium, plutonium and mixed oxide nuclear material samples. IDB provides access to well-characterized sets of gamma spectra described by rich metadata, including information on the sample, measurement configuration and detector specifications. These spectra are accessible in different formats, also compatible with analysis code standards, thus promoting their sustainability and maintenance.

None, Dipti [International Atomic Energy Agency (I↗

An approach for the measurement of the bulk temperature of single crystal diamond using an X-ray free electron laser

We present a method to determine the bulk temperature of a single crystal diamond sample at an X-Ray free electron laser using inelastic X-ray scattering. The experiment was performed at the high energy density instrument at the European XFEL GmbH, Germany. The technique, based on inelastic X-ray scattering and the principle of detailed balance, was demonstrated to give accurate temperature measurements, within 8% for both room temperature diamond and heated diamond to 500 K. Here, the temperature was increased in a controlled way using a resistive heater to test theoretical predictions of the scaling of the signal with temperature. The method was tested by validating the energy of the phonon modes with previous measurements made at room temperature using inelastic X-ray scattering and neutron scattering techniques. This technique could be used to determine the bulk temperature in transient systems with a temporal resolution of 50 fs and for which accurate measurements of thermodynamic properties are vital to build accurate equation of state and transport models.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Full structural ensembles of intrinsically disordered proteins from unbiased molecular dynamics simulations

Abstract Molecular dynamics (MD) simulation is widely used to complement ensemble-averaged experiments of intrinsically disordered proteins (IDPs). However, MD often suffers from limitations of inaccuracy. Here, we show that enhancing the sampling using Hamiltonian replica-exchange MD (HREMD) led to unbiased and accurate ensembles, reproducing small-angle scattering and NMR chemical shift experiments, for three IDPs of varying sequence properties using two recently optimized force fields, indicating the general applicability of HREMD for IDPs. We further demonstrate that, unlike HREMD, standard MD can reproduce experimental NMR chemical shifts, but not small-angle scattering data, suggesting chemical shifts are insufficient for testing the validity of IDP ensembles. Surprisingly, we reveal that despite differences in their sequence, the inter-chain statistics of all three IDPs are similar for short contour lengths (< 10 residues). The results suggest that the major hurdle of generating an accurate unbiased ensemble for IDPs has now been largely overcome.

59 BASIC BIOLOGICAL SCIENCES↗

The cosmic DANCe of Perseus

Context. Star-forming regions are excellent benchmarks for testing and validating theories of star formation and stellar evolution. The Perseus star-forming region, being one of the youngest (< 10 Myr), closest (280-320 pc), and most studied in the literature, is a fundamental benchmark. Aims. We aim to study the membership, phase-space structure, mass, and energy (kinetic plus potential) distribution of the Perseus star-forming region using public catalogues (Gaia, APOGEE, 2MASS, and Pan-STARRS). Methods. We used Bayesian methodologies that account for extinction to identify the Perseus physical groups in the phase-space, retrieve their candidate members, derive their properties (age, mass, 3D positions, 3D velocities, and energy), and attempt to reconstruct their origin. Results. We identify 1052 candidate members in seven physical groups (one of them new) with ages between 3 and 10 Myr, dynamical super-virial states, and large fractions of energetically unbounded stars. Their mass distributions are broadly compatible with that of Chabrier for masses ≳0.1 M ⊙ and do not show hints of over-abundance of low-mass stars in NGC 1333 with respect to IC 348. These groups’ ages, spatial structure, and kinematics are compatible with at least three generations of stars. Future work is still needed to clarify if the formation of the youngest was triggered by the oldest. Conclusions. The exquisite Gaia data complemented with public archives and mined with comprehensive Bayesian methodologies allow us to identify 31% more members than previous studies, discover a new physical group (Gorgophone: 7 Myr, 191 members, and 145 M ⊙ ), and confirm that the spatial, kinematic, and energy distributions of these groups support the hierarchical star formation scenario.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Inference of the optical depth to reionization τ from Planck CMB maps with convolutional neural networks

The optical depth to reionization, τ, is the least constrained parameter of the cosmological Λ cold dark matter (ΛCDM) model. To date, its most precise value is inferred from large-scale polarized cosmic microwave background (CMB) power spectra from the High Frequency Instrument (HFI) aboard the Planck satellite. These maps are known to contain significant contamination by residual non-Gaussian systematic effects, which are hard to model analytically. Therefore, robust constraints on τ are currently obtained through an empirical cross-spectrum likelihood built from simulations. In this paper, we present a likelihood-free inference of τ from polarized Planck HFI maps which, for the first time, is fully based on neural networks (NNs). NNs have the advantage of not requiring an analytical description of the data and can be trained on state-of-the-art simulations, combining the information from multiple channels. By using Gaussian sky simulations and Planck SRoll2 simulations, including CMB, noise, and residual instrumental systematic effects, we trained, tested, and validated NN models considering different setups. We inferred the value of τ directly from Stokes Q and U maps at ~4° pixel resolution, without computing angular power spectra. On Planck data, we obtained τ NN = 0.0579 ± 0.0082, which is compatible with current EE cross-spectrum results but with a ~30% larger uncertainty, which can be assigned to the inherent nonoptimality of our estimator and to the retraining procedure applied to avoid biases. While this paper does not improve on current cosmological constraints on τ, our analysis represents a first robust application of NN-based inference on real data, and highlights its potential as a promising tool for complementary analysis of near-future CMB experiments, also in view of the ongoing challenge to achieve the first detection of primordial gravitational waves.

79 ASTRONOMY AND ASTROPHYSICS↗

Density determination of the thermonuclear fuel region in inertial confinement fusion implosions

Understanding of the thermonuclear burn in an inertial confinement fusion implosion requires knowledge of the local deuterium–tritium (DT) fuel density. Neutron imaging of the core now provides this previously unavailable information. Two types of neutron images are required. The first is an image of the primary 14-MeV neutrons produced by the D +T fusion reaction. The second is an image of the 14-MeV neutrons that leave the implosion hot spot and are downscattered to lower energy by elastic and inelastic collisions in the fuel. These neutrons are measured by gating the detector to record the 6–12 MeV neutrons. Using the reconstructed primary image as a nonuniform source, a set of linear equations is derived that describes the contribution of each voxel of the DT fuel region to a pixel in the downscattered image. Using the measured intensity of the 14-MeV neutrons and downscattered images, the set of equations is solved for the density distribution in the fuel region. The method is validated against test problems and simulations of high-yield implosions. The calculated DT density distribution from one experiment is presented.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗