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At least 397 records · Page 22

An efficient second-order adaptive procedure for inserting CAD geometries into hexahedral meshes using volume fractions

Here, this paper is concerned with inserting three-dimensional computer-aided design (CAD) geometries into meshes composed of hexahedral elements using a volume fraction representation. An adaptive procedure for doing so is presented. The procedure consists of two steps. The first step performs spatial acceleration using a k-d tree. The second step involves subdividing individual hexahedra in an adaptive mesh refinement (AMR)-like fashion and approximating the CAD geometry linearly (as a plane) at the finest subdivision. The procedure requires only two geometric queries from a CAD kernel: determining whether or not a queried spatial coordinate is inside or outside the CAD geometry and determining the closest point on the CAD geometry’s surface from a given spatial coordinate. We prove that the procedure is second-order accurate for sufficiently smooth geometries and sufficiently refined background meshes. We demonstrate the expected order of accuracy is achieved with several verification tests and illustrate the procedure’s effectiveness for several exemplar CAD geometries.

Adaptive↗

Electrospray Generated from the Tip-Sealed Fine Glass Capillary Inserted with an Acupuncture Needle Electrode

In electrospray, excess charges are supplied to a sample solution by the occurrence of electrochemical reactions. Recently, different versions of electrospray, e.g., dielectric barrier electrospray ionization, inductive desorption electrospray ionization, and electrostatic-ionization driven by dielectric polarization, have been reported in which the sample solution was not in direct contact with the metal electrode but separated by dielectric materials. The objective of the current work is to elucidate the mechanism of dielectric barrier electrospray. A sealed borosilicate glass capillary inserted with a fine acupuncture needle was used as a probe. A sample solution (~ 400 nL) was captured on the glass capillary tip and a positive high voltage (HV) pulse (+ 4.5 kV) was applied to the internal metal electrode. Mass spectra were measured as a function of the HV pulse width from μs to 10 s. Ions started to be detected with the pulse width of ~ 5 ms. The ion intensities increased slowly with time and reached a plateau in a few seconds. The charge distribution of cytochrome c [M + nH]{sup n+} shifted to higher n values from a few ms to seconds. In addition to cone-jet mode normal electrospray that lasted until all the liquid sample was depleted from the glass tip, the polarization-induced electrospray ionization was observed at the early stage of the HV application. .

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

pH low insertion peptide mediated cell division cycle-associated protein 1 -siRNA transportation for prostatic cancer therapy targeted to the tumor microenvironment

Highlights: • Expression of CDCA1 in prostatic cancer cells and tissues. • Intracellular translocation of CDCA1-siRNA mediated by pHLIP. • pHLIP-CDCA1-siRNA suppresses xenograft prostatic tumor growth in vivo. • pHLIP-CDCA1-siRNA promote xenograft prostatic tumor cells apoptosis in vivo. Prostate cancer (PCa) is a common malignancy in male urinary system. Cell division cycle-associated protein 1 (CDCA1) is expressed highly in many cancer cells. Yet, whether CDCA1 play an important role in PCa progression is uncertain. pH low insertion peptide (pHLIP), a PH-induced transmembrane structure, can pass through the cell membrane into intracellular in an acidic environment. In this study, we try to confirm the expression status of CDCA1 in the PCa patients' tissues and PCa cell line. In addition, to make the CDCA1-siRNA efficiently targeting the PCa cells, pHLIP and CDCA1-siRNA were combined with disulfide bond to become effector molecules. By the characteristics of the pHLIP allosteric occurring in cancer tissue acidic microenvironment, CDCA1-siRNA may be transported specificity into prostatic cancer cells and released in the cytoplasm. The interference effect of the effector molecules on the CDCA1 was detected in vitro and in vivo. The results showed that CDCA1 was highly expressed in PCa cell line and human PCa clinical samples. Knock down CDCA1 significantly inhibit the growth and promote the apoptosis of prostatic cancer cells. In the intracellular translocation experiment, CDCA1-siRNA could be delivered into cytoplasma at pH 6.2, but not at pH 7.4. In the in vivo test, the tumor size was reduced obviously in the NOD/SCID mice treated with pHLIP-CDCA1-siRNA compared to the CDCA1-siRNA and the bioluminescent signal of Cy5-pHLIP-CDCA1-siRNA was focused detected in the tumor site. Our findings indicated that CDCA1 might be a very key molecule regulating survival and proliferation of PCa. pHLIP-CDCA1-siRNA might be a promising targeting therapy for PCa.

60 APPLIED LIFE SCIENCES↗

Forces on Nascent Polypeptides during Membrane Insertion and Translocation via the Sec Translocon

During ribosomal translation, nascent polypeptide chains (NCs) undergo a variety of physical processes that determine their fate in the cell. This study utilizes a combination of arrest peptide experiments and coarse-grained molecular dynamics to measure and elucidate the molecular origins of forces that are exerted on NCs during cotranslational membrane insertion and translocation via the Sec translocon. The approach enables deconvolution of force contributions from NC-translocon and NC-ribosome interactions, membrane partitioning, and electrostatic coupling to the membrane potential. In particular, we show that forces due to NC-lipid interactions provide a readout of conformational changes in the Sec translocon, demonstrating that lateral gate opening only occurs when a sufficiently hydrophobic segment of NC residues reaches the translocon. The combination of experiment and theory introduced here provides a detailed picture of the molecular interactions and conformational changes during ribosomal translation that govern protein biogenesis.

59 BASIC BIOLOGICAL SCIENCES↗

Numerical analysis of modified Central Solenoid insert design

The United States ITER Project Office (USIPO) is responsible for fabrication of the Central Solenoid (CS) for ITER project. The ITER machine is currently under construction by seven parties in Cadarache, France. The CS Insert (CSI) project should provide a verification of the conductor performance in relevant conditions of temperature, field, currents and mechanical strain. The US IPO designed the CSI that will be tested at the Central Solenoid Model Coil (CSMC) Test Facility at JAEA, Naka. To validate the modified design we performed three-dimensional numerical simulations using coupled solver for simultaneous structural, thermal and electromagnetic analysis. Thermal and electromagnetic simulations supported structural calculations providing necessary loads and strains. According to current analysis design of the modified coil satisfies ITER magnet structural design criteria for the following conditions: (1) room temperature, no current, (2) temperature 4K, no current, (3) temperature 4K, current 60 kA direct charge, and (4) temperature 4K, current 60 kA reverse charge. Fatigue life assessment analysis is performed for the alternating conditions of: temperature 4K, no current, and temperature 4K, current 45 kA direct charge. Results of fatigue analysis show that parts of the coil assembly can be qualified for up to 1 million cycles. Distributions of the Current Sharing Temperature (TCS) in the superconductor were obtained from numerical results using parameterization of the critical surface in the form similar to that proposed for ITER. Lastly, special ADPL scripts were developed for ANSYS allowing one-dimensional representation of TCS along the cable, as well as three-dimensional fields of TCS in superconductor material. Published by Elsevier B.V.

42 ENGINEERING↗

Galvanostatic interruption of lithium insertion into magnetite: Evidence of surface layer formation

Magnetite is a known lithium intercalation material, and the loss of active, nanocrystalline magnetite can be inferred from the open-circuit potential relaxation. Specifically, for current interruption after relatively small amounts of lithium insertion, the potential first increases and then decreases, and the decrease is hypothesized to be due to a formation of a surface layer, which increases the solid-state lithium concentration in the remaining active material. Comparisons of simulation to experiment suggest that the reactions with the electrolyte result in the formation of a thin layer of electrochemically inactive material, which is best described by a nucleation and growth mechanism. Simulations are consistent with experimental results observed for 6, 8 and 32-nm crystals. As a result, simulations capture the experimental differences in lithiation behavior between the first and second cycles.

25 ENERGY STORAGE↗

Lithium insertion properties of Li{sub x}TiNb{sub 2}O{sub 7} investigated by neutron diffraction and first-principles modelling

TiNb{sub 2}O{sub 7}, a good candidate as anode in lithium batteries, was treated with n-butyllithium to synthesize Li{sub x}TiNb{sub 2}O{sub 7} phases similar to those formed during electrochemical reactions. The Li{sub 2.67}TiNb{sub 2}O{sub 7} and Li{sub 3.33}TiNb{sub 2}O{sub 7} compounds, monoclinic C2/m, were studied by time-of-flight powder neutron diffraction. Their crystal structures, containing 3×3 blocks of (Ti,Nb)O{sub 6} octahedra, were Rietveld refined including Li positions. The Li atoms are distributed in similar amounts over sites with (Li–O) Coordination Numbers 5 and 4, although CN=5 should be preferred for having lower energy. Quantum-mechanical calculations were also performed, determining the average charge–discharge voltages to be 1.415 and 1.571 V for Li{sub 3.33}TiNb{sub 2}O{sub 7} and Li{sub 2.67}TiNb{sub 2}O{sub 7}, respectively, in good agreement with experimental results. An analysis of the theoretical charge distribution shows that, on lithiation, the chemical reduction of Ti and Nb atoms concentrates in the more condensed peripheral octahedra of the 3×3 block. This corresponds to electrons moving into a partly spin-polarized small band which gives rise to semi-metallic conductivity. - Graphical abstract: Structure of monoclinic Li{sub 3.33}TiNb{sub 2}O{sub 7}, and corresponding electron density of states. - Highlights: • Lithium was chemically inserted into the battery anode material TiNb{sub 2}O{sub 7}. • Li atoms are distributed over four- and fivefold oxygen coordinated sites. • On lithiation Nb and Ti atoms are reduced according to a peculiar structural pattern. • Theoretically predicted charge–discharge voltages fit experiments very well.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Coalescence growth mechanism of inserted tin dioxide belts in polycrystalline SnO2-based ceramics

Highlights: • Grain growth in SnO{sub 2}-based varistors was studied. • The growth of 1D SnO{sub 2} belts in the SnO{sub 2}-CoO-Cr{sub 2}O{sub 3}-Nb{sub 2}O{sub 5} system occurs by coalescence process. • Cross-Section and Tomography images showed tridimensional and pore free “giant grains”. • TEM was used to prove the alignment of the grains towards the SnO{sub 2} belt. • The coalescence growth just occurs with 1D structure and grains having the same crystal structure. - Abstract: SnO{sub 2}-based varistors have been considered promising technological devices. However their practical application is usually stated as limited to high voltage circuits based on the high breakdown electric field exhibited by these ceramics. Recently, authors have shown that the insertion of one-dimensional (1D) SnO{sub 2} belts allows overcoming this limitation. In this work, we present a detailed study of the growth mechanism of the belts inside varistors using electron microscopy techniques. We were able to show that mass transport has an intrinsic dependence on the sintering time and requires similar crystalline structure between the belts and the matrix. Dual beam and high-resolution transmission electron microscopy techniques permitted determining that 3D growth of belts occurs by coalescence.

36 MATERIALS SCIENCE↗

Coarse-grained methods for heterogeneous vesicles with phase-separated domains: Elastic mechanics of shape fluctuations, plate compression, and channel insertion

We develop coarse-grained particle approaches for studying the elastic mechanics of vesicles with heterogeneous membranes having phase-separated domains. We perform simulations both of passive shape fluctuations and of active systems where vesicles are subjected to compression between two plates or subjected to insertion into narrow channels. Analysis methods are developed for mapping particle configurations to continuum fields with spherical harmonics representations. Heterogeneous vesicles are found to exhibit rich behaviors where the heterogeneity can amplify surface two-point correlations, reduce resistance during compression, and augment vesicle transport times in channels. The developed methods provide general approaches for characterizing the mechanics of coarse-grained heterogeneous systems taking into account the roles of thermal fluctuations, geometry, and phase separation.

97 MATHEMATICS AND COMPUTING↗

Synthesis and lithium insertion properties of ramsdellite Li{sub x}TiO{sub 2} anode materials

Highlights: • Ramsdellite Li{sub x}Ti0{sub 2} with reduced form was prepared as a single phase by a new method. • The capacity was 208 mAh g{sup −1} in the region of 1.0–2.5 V at 0.8 C. • The charge and discharge proceeded in two stages unlike the oxidized form. - Abstract: Ramsdellite Li{sub x}TiO{sub 2} (x = 0.47) with reduced form is successfully prepared as a single phase by heating an amorphous lithium peroxo-polytitanate in 4.8% H{sub 2} at 1100 °C for 0–1 h. The XRD data are well refined with the space group Pnma with a = 0.96076 nm, b = 0.29514 nm and c = 0.50276 nm. The ramsdellite Li{sub x}TiO{sub 2} transforms into a rutile–ramsdellite intergrowth phase by extending the heating time to 1.25–4 h. The capacity of the ramsdellite Li{sub x}TiO{sub 2} in the region of 1.0–2.5 V (vs Li) is 208 mAh g{sup −1} at 0.8 C rate (0.13 mA mg{sup −1}), substantially larger than that of the ramsdellite Li{sub 2}Ti{sub 3}O{sub 7} with oxidized form. The lithium insertion and deinsertion proceeds in two stages: a sloping region at higher potential (1.4–2.3 V) and a plateau region at lower potential (1.3–1.4 V)

36 MATERIALS SCIENCE↗

Reversible Mg insertion into chevrel phase Mo6S8 cathode: Preparation, electrochemistry and X-ray photoelectron spectroscopy study

Highlights: • Surface modification of Mo6S8 to enhance the reactivity against Mg. • Mechanism study using XPS and EIS. • Excellent Mg-ion battery performance. - Abstract: Electrical energy storage is absolute for complete usage of all renewable energy sources. Herein, we have studied the electrochemical performance of Chevrel phase Mo{sub 6}S{sub 8} as cathode material towards rechargeable Mg battery. Solution chemistry route is adopted for the synthesis of Mo{sub 6}S{sub 8.} The morphology, phase purity is analyzed by Scanning Electron Microscopy, Transmission Electron Microscopy, and X-Ray Diffraction techniques. The cyclic Voltammetry and Galvanostatic charge-discharge studies confirmed the reversibility of Mg-ion insertion. Herein, Mo{sub 6}S{sub 8} cubes show excellent capacity retention of 70 mAh g{sup −1} for 200 cycles at C/5 rate. The role of CNT in improving rate performance was also demonstrated. The reasonable reversible capacity, rate performance, and cycling stability reveal the feasibility of Mo{sub 6}S{sub 8} material for future rechargeable Mg battery. In order to study the kinetics of Chevrel phase compound upon cycling, EIS study was carried out. The redox process upon insertion/extraction is investigated by X-ray Photoelectron spectroscopy which shows no change in oxidation state of a transition metal.

25 ENERGY STORAGE↗

A high-granularity calorimeter insert based on SiPM-on-tile technology at the future Electron-Ion Collider

Herein we present a design for a high-granularity calorimeter insert for future experiments at the Electron-Ion Collider (EIC). The sampling-calorimeter design uses scintillator tiles read out with silicon photomultipliers. It maximizes coverage close to the beampipe, while solving challenges arising from the beam-crossing angle and mechanical integration. It yields a compensated response that is linear over the energy range of interest for the EIC. Its energy resolution meets the requirements set in the EIC Yellow Report even with a basic reconstruction algorithm. Moreover, this detector will provide 5D shower data (position, energy, and time), which can be exploited with machine-learning techniques. This detector concept has the potential to unleash the power of imaging calorimetry at the EIC to enable measurements at extreme kinematics in electron–proton and electron–nucleus collisions.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗

Chloride Insertion Enhances the Electrochemical Oxidation of Iron Hydroxide Double-Layer Hydroxide into Oxyhydroxide in Alkaline Iron Batteries

Rechargeable alkaline iron batteries that constitute environmentally benign electrolytes and earth-abundant industrial materials are desirable green solutions for large-scale energy storage. As one of the most abundant metal elements in the earth’s crust, iron (Fe) can satisfy nearly all criteria for low-cost and safe battery electrodes. However, challenges in achieving reversible Fe redox impede their extensive implementation in modern energy supply systems. Here, this study revealed that Cl-anion insertion into Fe(OH) 2 layered double hydroxide (LDH) formed a green rust intermediate phase with the formula [Fe 2 2+ Fe 1 3+ (HO – ) 6 ] + [Cl] – , which assisted a high Fe(OH) 2 /FeOOH conversion reaction (64.7%) and improved cycling stability. This new iron redox chemistry was validated by operando X-ray diffraction, electrochemical testing, X-ray absorption spectroscopy (XAS), X-ray photoelectron spectroscopy (XPS) analysis, scanning transmission electron microscopy–energy-dispersive X-ray spectroscopy (STEM-EDS) mapping, and molecular dynamics (MD) simulations. Our study provides new insight into designing LDH materials for high-capacity alkaline iron batteries.

36 MATERIALS SCIENCE↗

Structural Evolution of Reversible Mg Insertion into a Bilayer Structure of V 2 O 5 · n H 2 O Xerogel Material

Functional multivalent intercalation cathodes represent one of the largest hurdles in the development of Mg batteries. While there are many reports of Mg cathodes, many times the evidence of intercalation chemistry is only circumstantial. In this work, direct evidence of Mg intercalation into a bilayer structure of V2O5·nH2O xerogel is confirmed, and the nature of the Mg intercalated species is reported. The interlayer spacing of V2O5·nH2O contracts upon Mg intercalation and expands for Mg deintercalation due to the strong electrostatic interaction between the divalent cation and the cathode. A combination of NMR, pair distribution function (PDF) analysis, and X-ray absorption near edge spectroscopy (XANES) confirmed reversible Mg insertion into the V2O5·nH2O material, and structural evolution of Mg intercalation leads to the formation of multiple new phases. Structures of V2O5·nH2O with Mg intercalation were further supported by the first principle simulations. A solvent cointercalated Mg in V2O5·nH2O is observed for the first time, and the 25Mg magic angle spinning nuclear magnetic resonance (MAS NMR) spectroscopy was used to elucidate the structure obtained upon electrochemical cycling. Specifically, existence of a well-defined Mg–O environment is revealed for the Mg intercalated structures. Information reported here reveals the fundamental Mg ion intercalation mechanism in a bilayer structure of V2O5·nH2O material and provides insightful design metrics for future Mg cathodes.

36 MATERIALS SCIENCE↗

A reversible phase transition for sodium insertion in anatase TiO 2

Anatase TiO 2 is a potential negative electrode for sodium-ion batteries. The sodium storage mechanism is, however, still under debate, yet its comprehension is required to optimize the electrochemical properties. To clarify the sodium storage mechanism occurring in anatase, we have used both electrochemical and chemical routes from which we obtained similar trends. During the first discharge, an irreversible plateau region is observed which corresponds to the insertion of Na+ within the interstitial sites of anatase and is accompanied by a drastic loss of the long-range order as revealed by X-ray diffraction, high resolution of high angle annular dark-field scanning transmission electron microscope (HAADF-STEM), and pair distribution function (PDF) analysis. Further structural analysis of the total scattering data indicates that the sodiated phase displays a layered-like rhombohedral R3m structure built from the stacking of Ti and Na slabs. Because of the initial 3D network of anatase, the reduced phase shows strong disorder due to cationic intermixing between the Ti and Na slabs and the refined chemical formula is (Na 0.43 Ti 0.57 ) 3a 0.22 Na 0.39 Ti 0.39 ) 3b O 2 , where refers to vacancy. The presence of high valence Ti ions in the Na layers induces a contraction of the c-parameter as compared to the ordered phase. Upon desodiation, the structure further amorphized and the local structure probed by PDF is shown to be similar to the anatase TiO 2 , suggesting that the 3D network is recovered. The reversible sodium insertion/deinsertion is thus attributed to the rhombohedral active phase formed during the first discharge, and an oxidized phase featuring the local structure of anatase. Due to the amorphous nature of the two phases, the potential-composition curves are characterized by a sloping curve. Lastly, a comparison between the intercalation of lithium and sodium into anatase TiO 2 performed by DFT calculations confirmed that, for the sodiated phase, the rhombohedral structure is more stable than the tetragonal phase observed during the lithiation of nanoparticles.

36 MATERIALS SCIENCE↗

Rapid, reversible, solid–gas and solution-phase insertion of CO 2 into In–P bonds

The P,P-chelated heteroleptic complex bis[bis(diisopropylphosphino)amido]indium chloride [(i-Pr 2 P) 2 N] 2 InCl was prepared in high yield by treating InCl 3 with 2 equiv of (i-Pr 2 P) 2 NLi in Et 2 O/tetrahydrofuran solution. Samples of [(i-Pr 2 P) 2 N] 2 InCl in a pentane slurry, a CH 2 Cl 2 solution, or in the solid state were exposed to CO 2 , resulting in the insertion of CO 2 into two of the four M–P bonds to produce [O 2 CP(i-Pr 2 )NP(i-Pr 2 )] 2 InCl in each case. These compounds were characterized by multinuclear NMR and IR spectroscopy, as well as single-crystal X-ray diffraction. ReactIR solution studies show that the reaction is complete in less than 1 min at room temperature in solution and in less than 2 h in the solid–gas reaction. The CO 2 complex is stable up to at least 60 °C under vacuum, but the starting material is regenerated with concomitant loss of carbon dioxide upon heating above 75 °C. Furthermore, the compound [(i-Pr 2 P) 2 N] 2 InCl also reacts with CS 2 to give a complicated mixture of products, one of which was identified as the CS 2 cleavage product [S=P(i-Pr 2 )NP(i-Pr 2 )] 2 InCl] 2 (μ-Cl)[μ-(i-Pr 2 P) 2 N)].

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Reversible Electrochemical Lithium-Ion Insertion into the Rhenium Cluster Chalcogenide–Halide Re 6 Se 8 Cl 2

The cluster-based material Re 6 Se 8 Cl 2 is a two-dimensional ternary material with cluster–cluster bonding across the a and b axes capable of multiple electron transfer accompanied by ion insertion across the c axis. The Li/Re 6 Se 8 Cl 2 system showed reversible electron transfer from 1 to 3 electron equivalents (ee) at high current densities (88 mA/g). Upon cycling to 4 ee, there was evidence of capacity degradation over 50 cycles associated with the formation of an organic solid–electrolyte interface (between 1.45 and 1 V vs Li/Li + ). Furthermore, this investigation highlights the ability of cluster-based materials with two-dimensional cluster bonding to be used in applications such as energy storage, showing structural stability and high rate capability.

36 MATERIALS SCIENCE↗

Dramatic Conformer-Dependent Reactivity of the Acetaldehyde Oxide Criegee Intermediate with Dimethylamine Via a 1,2-Insertion Mechanism

The reactivity of carbonyl oxides has previously been shown to exhibit strong conformer and substituent dependencies. Through a combination of synchrotron multiplexed photoionization mass spectrometry experiments (298 K, 4 Torr) and high-level theory (CCSD(T)-F12/cc-pVTZ-F12//B2PLYP-D3/cc-pVTZ with an added CCSDT(Q) correction), we explore the conformer dependence of the reaction of acetaldehyde oxide (CH 3 CHOO) with dimethyl amine (DMA). The experimental data supports the theoretically predicted 1,2-insertion mechanism and the formation of an amine-functionalized hydroperoxide reaction product. Tunable-VUV photoionization probing of anti- or anti- + syn-CH 3 CHOO reveals a strong conformer dependence of the title reaction. Here, the rate coefficient of DMA with anti-CH 3 CHOO is predicted to exceed that for the reaction with syn-CH 3 CHOO by a factor of ~34,000, which is attributed to submerged barrier (syn) vs. barrierless (anti) mechanisms for energetically downhill reactions.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗