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NASA NTRS2024

Summary and Annotated Bibliography of Measurement Error Corrections with Potential Application in Future Quesst Mission Community Noise Studies

This document is motivated by likely needs of the Quesst mission community response tests, which will culminate in data collection and estimation of dose-response regression relationships for consideration by domestic and international aviation regulators. Furthermore, basic research questions evaluating interactions between rates of community annoyance, dose levels, and indicators of the presence of rattle, vibration, and startle hinge on hypothesis testing in the context of regression models. For a variety of reasons, noise doses may be known only imprecisely and may not reflect the actual level experienced by responding subjects. These differences between true dose and estimated dose, be they systematic or random, constitute covariate measurement error. Available statistics literature speaks to the impacts of measurement error on regression models, both in terms of bias in estimated coefficients and predicted values, and in terms of the loss of statistical power for hypothesis testing. Given the particulars of a categorical annoyance response variable and a continuous noise dose predictor variable subject to measurement error during testing, the emphasis of this report is on findings and methods pertinent to generalized linear (and mixed) models likely to be employed during the Quesst mission community tests. We reach the following conclusions: 1. Of four reviewed methods, structural Bayesian measurement error models and simulation extrapolation (SIMEX) may be the most readily applicable to Quesst mission community noise study objectives. 2. If warranted, a linear measurement model can help model systematic sources of measurement error that the classical measurement error does not. 3. For its ready implementation and small additional input requirements, simulation extrapolation may be ideally suited for addressing secondary research questions involving interactions between annoyance, noise dose, and other factors through hypothesis testing. 4. For their flexibility and ability to propagate uncertainty, structural Bayesian hierarchical models have great appeal for mission purposes; some care may be needed in developing appropriate probability models describing actual noise exposure during testing. An annotated bibliography logs additional papers and resources that may be of value to analysts in other projects and disciplines.

Dose-Response Model↗
DOE OSTI2022

The Diurnal Dynamics of Gross Primary Productivity Using Observations From the Advanced Baseline Imager on the Geostationary Operational Environmental Satellite‐R Series at an Oak Savanna Ecosystem

Gross primary productivity (GPP) is the largest flux in the global carbon cycle and satellite-based GPP estimates have long been used to study the trends and interannual variability of GPP. With recent updates to geostationary satellites, we can now explore the diurnal variability of GPP at a comparable spatial resolution to polar-orbiting satellites and at temporal frequencies comparable to eddy covariance (EC) tower sites. We used observations from the Advanced Baseline Imager on the Geostationary Operational Environmental Satellite-R series (GOES-R) to test the ability of subdaily satellite data to capture the shifts in the diurnal course of GPP at an oak savanna EC site in California, USA that is subject to seasonal soil moisture declines. We compared three methods to estimate GPP: (a) a light-use efficiency model, (b) a linear relationship between the product of near-infrared reflectance of vegetation and photosynthetically active radiation (LIN-NIR v P) and EC tower GPP, and (c) a light response curve (LRC-NIR v P) between NIR v P and EC GPP. The LRC-NIR v P achieved the lowest mean absolute error for winter (2 µmol CO 2 m –2 s –1 ), spring (2.51 µmol CO 2 m –2 s –1 ), summer (1.43 µmol CO 2 m –2 s –1 ), and fall (1.35 µmol CO 2 m –2 s –1 ). The ecosystem experienced the largest shift in daily peak GPP in relation to the peak of incoming solar radiation toward the morning hours during the dry summers. The LRC-NIRvP and the light-use efficiency model were in agreement with these patterns of a shift in peak daily GPP toward the morning hours during summer. Our results can help develop diurnal estimates of GPP from geostationary satellites that are sensitive to fluctuating environmental conditions during the day.

54 ENVIRONMENTAL SCIENCES↗
NASA NTRS2007

NASA Langley's Approach to the Sandia's Structural Dynamics Challenge Problem

The objective of this challenge is to develop a data-based probabilistic model of uncertainty to predict the behavior of subsystems (payloads) by themselves and while coupled to a primary (target) system. Although this type of analysis is routinely performed and representative of issues faced in real-world system design and integration, there are still several key technical challenges that must be addressed when analyzing uncertain interconnected systems. For example, one key technical challenge is related to the fact that there is limited data on target configurations. Moreover, it is typical to have multiple data sets from experiments conducted at the subsystem level, but often samples sizes are not sufficient to compute high confidence statistics. In this challenge problem additional constraints are placed as ground rules for the participants. One such rule is that mathematical models of the subsystem are limited to linear approximations of the nonlinear physics of the problem at hand. Also, participants are constrained to use these models and the multiple data sets to make predictions about the target system response under completely different input conditions. Our approach involved initially the screening of several different methods. Three of the ones considered are presented herein. The first one is based on the transformation of the modal data to an orthogonal space where the mean and covariance of the data are matched by the model. The other two approaches worked solutions in physical space where the uncertain parameter set is made of masses, stiffnesses and damping coefficients; one matches confidence intervals of low order moments of the statistics via optimization while the second one uses a Kernel density estimation approach. The paper will touch on all the approaches, lessons learned, validation 1 metrics and their comparison, data quantity restriction, and assumptions/limitations of each approach. Keywords: Probabilistic modeling, model validation, uncertainty quantification, kernel density

Horta, Lucas G.↗
DOE OSTI2024

Role of the likelihood for elastic scattering uncertainty quantification

In the last decade, uncertainty quantification (UQ) for optical model potentials (OMPs) has become a focal point for nuclear reaction theory, and several competing approaches for OMP UQ have recently been developed. Here, we clarify recent efforts to compare frequentist and Bayesian approaches in the context of OMP UQ [G. B. King et al., Phys. Rev. Lett. 122, 232502 (2019)]. We replicate a portion of that OMP UQ study but use independent statistical tools. Specifically, we compare two methods for OMP parameter inference from elastic scattering data: the Levenberg-Marquardt algorithm for χ 2 minimization on one hand and Markov chain Monte Carlo (MCMC) sampling on the other. Separately, we assess the common practice of using a renormalized likelihood (χ 2 /N), N being the number of data points, instead of the canonical weighted-least-squares likelihood (χ 2 ), as a way of accounting for unknown data correlations. Here, we show that for a generic linear model and for a five-parameter OMP analysis, frequentist and uniform-prior Bayesian approaches recover the same optimum and uncertainty estimates—not systematically larger uncertainties for the Bayesian approach, as was concluded in G. B. King et al., Phys. Rev. Lett. 122, 232502 (2019). Further, we show that if an additional, near-degenerate parameter is introduced into the same OMP analysis such that the parameter posterior becomes non-Gaussian, then covariance-based estimates of uncertainty become unreliable. Finally, we show that regardless of optimization approach, if χ 2 /N is used for the likelihood, the resulting parametric uncertainties increase by $\sqrt{N}$, and that this is responsible for the conclusions drawn in the revisited study. Based on our replication results, we find that a fortuitous cancellation of unreported errors and the renormalization factor can lead to improvement in empirical coverages, as was the case in the original comparative study. We emphasize that developing and applying a realistic likelihood function is an essential task in a UQ analysis, and that several recent UQ studies that employed a renormalized likelihood (i.e., including a 1/N factor) may have yielded unrealistically large uncertainties for elastic-scattering observables. If the parameter posterior deviates from multivariate-normal, a sampling-based approach like MCMC has a clear advantage over methods that assume the Laplace approximation holds. We note that empirical coverage can serve as an important internal check for the analyst whose model or data may have additional, unaccounted-for uncertainties.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2020

Learning in Modal Space: Solving Time-Dependent Stochastic PDEs Using Physics-Informed Neural Networks

One of the open problems in scientific computing is the long-time integration of nonlinear stochastic partial differential equations (SPDEs), especially with arbitrary initial data. We address this problem by taking advantage of recent advances in scientific machine learning and the spectral dynamically orthogonal (DO) and borthogonal (BO) methods for representing stochastic processes. The recently introduced DO/BO methods reduce the SPDE to solving a system of deterministic PDEs and a system of stochastic ordinary differential equations. Specifically, we propose two new physics-informed neural networks (PINNs) for solving time-dependent SPDEs, namely the neural network (NN)-DO/BO methods. The proposed methods incorporate the DO/BO constraints into the loss function (along with the modal decomposition of the SPDE) with an implicit form instead of generating explicit expressions for the temporal derivatives of the DO/BO modes. Hence, the NN-DO/BO methods can overcome some of the drawbacks of the original DO/BO methods. For example, we do not need the assumption that the covariance matrix of the random coefficients is invertible as in the original DO method, and we can remove the assumption of no eigenvalue crossing as in the original BO method. Moreover, the NN-DO/BO methods can be used to solve time-dependent stochastic inverse problems with the same formulation and same computational complexity as for forward problems. Furthermore, we demonstrate the capability of the proposed methods via several numerical examples, namely: (1) A linear stochastic advection equation with deterministic initial condition: we obtain good results with the proposed methods, while the original DO/BO methods cannot be applied directly in this case. (2) Long-time integration of the stochastic Burgers' equation: we show the good performance of NN-DO/BO methods, especially the effectiveness of the NN-BO approach for such problems with many eigenvalue crossings during the whole time evolution, while the original BO method fails. (3) Nonlinear reaction diffusion equation: we consider both the forward problem and the inverse problems, including very noisy initial point values, to investigate the flexibility of the NN-DO/BO methods in handling inverse and mixed type problems. Taken together, these simulation results demonstrate that the NN-DO/BO methods can be employed to effectively quantify uncertainty propagation in a wide range of physical problems, but future work should address the efficiency issue of PINNs for forward problems.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2021

Development of a metamodelling framework for building energy models with application to fifth-generation district heating and cooling networks

Fully defined physics-based building energy models can accurately represent building systems; however, generating models based on high-level parameters is time consuming and simulation time of complex models can be slow. This article discusses the development of a Metamodelling Framework to create metamodels from a building energy modelling dataset. The framework generates metamodels using either linear regression, random forests, or support vector regressions. A fifth-generation district heating and cooling system analysis use case was used to motivate the development of the framework. The use case required quick and accurate representations of annual building loads reported hourly. Typical annual building modelling approaches can result in a runtime of 10 min. The metamodels runtime was reduced to less than 10 s to load and run an annual simulation with user-defined covariates. The results of the metamodel performance and an abbreviated topology analysis based on the motivating use case will be presented.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
NASA NTRS1985

Efficient algorithms for use in probabilistic finite element analysis

This paper investigates the use of Fast Probability Integration (FPI) algorithms in a Finite Element environment. A method allowing the representation of correlated fields in terms of a vector of uncorrelated transformed variables, based on the spectral decomposition of the variance-covariance matrix is developed. The response of the deterministic model corresponding to selected perturbations of these uncorrelated variables is then obtained via a Newton-type iterative scheme. The results of the perturbed problems are used to construct a local representation of the model's behavior in the neighborhood of the deterministic state, which the FPI algorithm will use to estimate the reliability of the system. Although the proposed strategy has thus far only been applied to linear elastostatics, the extension of the method to a broader class of problems appears to be feasible.

Dias, J. B.↗
DOE OSTI2020

Scaling Analysis of Two–Phase Flow in Fractal Permeability Fields

Fluid mixing in permeable media is essential in many practical applications. The mixing process is a consequence of velocity fluctuations owing to geological heterogeneities and mobility contrast of fluids. Heterogeneities in natural rocks are often spatially correlated, and their properties, such as permeability, may be described using fractal distributions. This work models the fractal characteristics of such permeability fields in which the covariance function is expressed as a power-law function. A generalized scaling relation is derived relating various fractal permeability fields using the magnitude of their fluctuations. Here, this relation reveals the self-similar behavior of two-phase flow in such permeable media. To that end, a recently developed, high-resolution numerical simulator is employed to validate the analytically derived scaling relations. Two flow problems are considered in which flow is governed by 1) a linear, and 2) a nonlinear transport equation. Due to the probabilistic representation of the fractal permeability fields, a sensitivity study is conducted for each flow scenario to determine the number of realizations required for statistical convergence. Scaling analysis is performed using ensemble averages of simulated saturation profiles and their mixing lengths. Results support the validity of the developed scaling relation across the range of investigated flow conditions at intermediate times. The dynamics of linear flow in the asymptotic regime is affected by the correlation structure of heterogeneity. In nonlinear flow, scaling behavior appears to be dominated by the degree of nonlinearity.

58 GEOSCIENCES↗
DOE OSTI2020

Tracking Seasonal and Interannual Variability in Photosynthetic Downregulation in Response to Water Stress at a Temperate Deciduous Forest

Abstract The understanding and modeling of photosynthetic dynamics affected by climate variability can be highly uncertain. In this paper, we examined a well‐characterized eddy covariance site in a drought‐prone temperate deciduous broadleaf forest combining tower measurements and satellite observations. We find that an increase in spring temperature usually leads to enhanced spring gross primary production (GPP), but a GPP reduction in late growing season due to water limitation. We evaluated how well a coupled fluorescence‐photosynthesis model (SCOPE) and satellite data sets track the interannual and seasonal variations of tower GPP from 2007 to 2016. In SCOPE, a simple stress factor scaling of Vcmax as a linear function of observed predawn leaf water potential ( ψ pd ) shows a good agreement between modeled and measured interannual variations in both GPP and solar‐induced chlorophyll fluorescence (SIF) from the Global Ozone Monitoring Experiment‐2 (GOME‐2). The modeled and satellite‐observed changes in SIF yield are ~30% smaller than corresponding changes in light use efficiency (LUE) under severe stress, for which a common linear SIF to GPP scaling would underestimate the stress reduction in GPP. Overall, GOME‐2 SIF tracks interannual tower GPP variations better than satellite vegetations indices (VIs) representing canopy “greenness.” However, it is still challenging to attribute observed SIF variations unequivocally to greenness or physiological changes due to large GOME‐2 footprint. Higher‐resolution SIF data sets (e.g., TROPOMI) already show the potential to well capture the downregulation of late‐season GPP and could pave the way to better disentangle canopy structural and physiological changes in the future.

He, Liyin↗
DOE OSTI2025

DESI DR1 Ly α 1D power spectrum: the Fast Fourier Transform estimator measurement

Here, we present the one-dimensional Lyman-α forest power spectrum measurement derived from the data release 1 (DR1) of the Dark Energy Spectroscopic Instrument (DESI). The measurement of the Lyman-α forest power spectrum along the line of sight from high-redshift quasar spectra provides information on the shape of the linear matter power spectrum, neutrino masses, and the properties of dark matter. In this work, we use a Fast Fourier Transform (FFT)-based estimator, which is validated on synthetic data in a companion paper. Compared to the FFT measurement performed on the DESI early data release, we improve the noise characterization with a cross-exposure estimator and test the robustness of our measurement using various data splits. We also refine the estimation of the uncertainties and now present an estimator for the covariance matrix of the measurement. Furthermore, we compare our results to previous high-resolution and eBOSS measurements. In another companion paper, we present the same DR1 measurement using the Quadratic Maximum Likelihood Estimator (QMLE). These two measurements are consistent with each other and constitute the most precise one-dimensional power spectrum measurement to date, while being in good agreement with results from the DESI early data release.

Lyman alpha forest↗
DOE OSTI2022

Measurement of Compton Scattering at MAMI for the Extraction of the Electric and Magnetic Polarizabilities of the Proton

A precise measurement of the differential cross sections dσ/dΩ and the linearly polarized photon beam asymmetry Σ 3 for Compton scattering on the proton below pion threshold has been performed with a tagged photon beam and almost 4π detector at the Mainz Microtron. The incident photons were produced by the recently upgraded Glasgow-Mainz photon tagging facility and impinged on a cryogenic liquid hydrogen target, with the scattered photons detected in the Crystal Ball/TAPS setup. Using the highest statistics Compton scattering data ever measured on the proton along with two effective field theories (both covariant baryon and heavy-baryon) and one fixed-t dispersion relation model, constraining the fits with the Baldin sum rule, we have obtained the proton electric and magnetic polarizabilities with unprecedented precision: α E1 = 10.99 ± 0.16 ± 0.47 ± 0.17 ± 0.34, β M1 = 3.14 ± 0.21 ± 0.24 ± 0.20 ± 0.35; in units of 10 -4 fm 3 where the errors are statistical, systematic, spin polarizability dependent, and model dependent.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
NASA NTRS1972

On a stochastic control method for weakly coupled linear systems

The stochastic control of two weakly coupled linear systems with different controllers is considered. Each controller only makes measurements about his own system; no information about the other system is assumed to be available. Based on the noisy measurements, the controllers are to generate independently suitable control policies which minimize a quadratic cost functional. To account for the effects of weak coupling directly, an approximate model, which involves replacing the influence of one system on the other by a white noise process is proposed. Simple suboptimal control problem for calculating the covariances of these noises is solved using the matrix minimum principle. The overall system performance based on this scheme is analyzed as a function of the degree of intersystem coupling.

Kwong, R. H.↗
DOE OSTI2020

Combined Neyman–Pearson chi-square: An improved approximation to the Poisson-likelihood chi-square

We describe an approximation to the widely-used Poisson-likelihood chi-square using a linear combination of Neyman’s and Pearson’s chi-squares, namely “combined Neyman–Pearson chi-square” ($X^2_{CNP}$). Through analytical derivations and toy model simulations, we show that leads to a significantly smaller bias on the best-fit model parameters compared to those using either Neyman’s or Pearson’s chi-square. When the computational cost of using the Poisson-likelihood chi-square is high, $X^2_{CNP}$ provides a good alternative given its natural connection to the covariance matrix formalism.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗
DOE OSTI2022

Nuclear data covariances are critical input to determine upper sub-critical limits and to design experiments to increase it [Slides]

This presentation discusses how Upper Subcritical Limits (USL) are key parameters to determine operational limits in nuclear criticality safety evaluations. It also discusses an example of plutonium casting operation using tantalum at LANL PF-4. The Whisper tool at Los Alamos relies on many inputs, including covariance data, leading the presentation to ask if an existing benchmark data be used in Whisper to adjust nuclear data and covariances to justify a higher USL. If not, Whisper can be used to help design an optimal new benchmark experiment. The presentation also seeks to determine what the possible impacts are on USL and operational limits for plutonium casting. In conclusion, nuclear data covariances are used for by Whisper for: GSSL adjustment of nuclear data and covariances, identification of most similar existing benchmark experiments to application, simulation of Upper Subcritical Limit of application, and input to optimization techniques for designing most appropriate new benchmark experiment(s) to meet requirements. This requires a complete set of nuclear data covariances, benchmarks and k-effective sensitivity profiles (for both benchmarks and applications). The presentation concludes by asking if end users should trust results that depend on current covariance data.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
NASA NTRS1982

Sensitivity of constrained linear inversions to the selection of the Lagrange multiplier

The influence of the choice of the Lagrange multiplier on constrained linear inversions is explored, with reference made to applications in inferring the columnar aerosol size distributions from spectral aerosol optical depth measurements. A range of the Lagrange multiplier is examined to find all positive solutions for the solution vector, which represents modifying factors to the assumed form of the size distribution. An iterative method is devised to constrain the calculations to consideration of only positive quantities and a requirement that the regression fit to data be consistent with measurement errors. The determination of the variances and covariances is formulated and applied to existing data sets for optical depth. Variances in the solution are found to be large for particle radii when the information content of the data is small.

King, M. D.↗
NASA NTRSDate not supplied

Development and Airborne Demonstration of the Concurrent Artificially-Intelligent Spectrometry and Adaptive Lidar System: Advancing Lidar Capabilities for the STV Observing System

We report on the design, build and planned airborne demonstration of a spaceflight-prototype Concurrent Artificially-intelligent Spectrometry and Adaptive Lidar System (CASALS). The CASALS lidar is an Adaptive Wavelength Scanning Lidar (AWSL) operating in push broom mode. The demonstration has three major goals: advance the Technical Readiness Level of the AWSL hardware, validate its measurement performance and mature algorithms and methods needed for the Surface Topography and Vegetation (STV) observing system. AWSL acquires parallel tracks of surface heights by rapidly steering a laser beam across a swath. A 1040nm-centered laser is tuned across 30nm and carved into 2-ns pulses, the pulse energy is fiber amplified and the pulses are dispersed cross-track using a non-mechanical wavelength-to-angle grating. For the spaceflight system the beam will be pointable to 1200 10m footprints across a 7km swath. For the airborne demonstration there will be 256 0.7m footprints across a 110m swath. In both cases the footprints overlap across- and along-track for uniform target illumination. For the airborne demonstration a steering mirror will increase the accessible swath width to 4km. At the receiver, solar radiation is filtered with a narrow-slit grating-spectrometer and the footprints are imaged onto a linear-mode, photon-sensitive HgCdTe APD-array. The received pulses are time-division-multiplexed to a few high-speed analog-to-digital converters to record waveforms. Spaceflight and airborne CASALS are designed to nominally detect 20 photons per pulse and, by averaging 27 overlapping footprints, achieve 2cm flat target range precision and high-quality vegetation structure waveforms The AWSL will be flown in the summer of 2024, along with a Headwall VNIR-SWIR hyperspectral sensor imaging a 4km wide swath, at NEON eddy covariance flux towers in the U.S. mid-Atlantic where high resolution hyperspectral and lidar data, acquired annually, are available for validation.

Guangning Yang↗
DOE OSTI2022

Correlation Calculations for the Russian Pu Metal Fast Experiments

Nuclear criticality experiments are often conducted in campaigns with multiple variations. These experiments reuse the same basic components, like the fuel, moderator, or positioning machines. The components have uncertainties in their geometry and composition that propagate to models of the experiments. Shared components create shared uncertainty between the $k_{eff}$ of benchmarks. The shared uncertainty is commonly quantified with a covariance, or correlation coefficient. These covariances can impact criticality safety and nuclear data validation applications. While benchmark evaluations tabulate an experiment’s uncertainty, they often lack a detailed calculation of correlations between experiments. Even some very commonly used benchmarks, like the Russian Pu Metal Fast (PMF) experiments, have missing correlations. This paper presents our approach to calculate the correlations for five of the Russian PMF experiments. The experiments share hemispherical Pu shells that induce a correlation between modeled $k_{eff}$ values. We estimated the correlations with simplified and detailed models of the experiments through linear-perturbation theory. The correlations between the experiments vary significantly between the detailed vs. simplified models. We also investigate how the correlations affect validation metrics of the experiments.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗
DOE OSTI2022

NEONiso R Package, versions greater than 0.5.2

Carbon fluxes in terrestrial ecosystems and their response to environmental change are a major source of uncertainty in the modern carbon cycle. The National Ecological Observatory Network (NEON) presents the opportunity to merge eddy covariance (EC)-derived fluxes with CO2 isotope ratio measurements to gain insights into carbon cycle processes. Collected continuously and consistently across >40 sites, NEON EC and isotope data facilitate novel integrative analyses. However, currently provisioned atmospheric isotope data are uncalibrated, greatly limiting ability to perform cross-site analyses. Here, we present two approaches to calibrating NEON CO2 isotope ratios, along with an R package to calibrate NEON data. We find that calibrating CO2 isotopologues independently yields a lower d13C bias (<0.05‰) and higher precision (<0.40‰) than directly correcting d13C with linear regression (bias: <0.11‰, precision: 0.42‰), but with slightly higher error and lower precision in calibrated CO2 mole fraction. The magnitude of the corrections to d13C and CO2 mole fractions vary substantially by site, underscoring the need for users to apply a consistent calibration framework to data in the NEON archive. Post-calibration data sets show that site mean annual d13C correlates negatively with precipitation, temperature, and aridity, but positively with elevation. Forested and agricultural ecosystems exhibit larger gradients in CO2 and d13C than other sites, particularly during the summer and at night. The overview and analysis tools developed here will facilitate cross-site analysis using NEON data, provide a model for other continental-scale observational networks, and enable new advances leveraging the isotope ratios of specific carbon fluxes.

Fiorella, Richard↗