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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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392 records · Page 22
All sourcesNASA NTRSDOE OSTI
DOE OSTI2023

KBase Narrative - SOMATA - Motivating Example

A systems view in the biological context is a useful approach to study complex and potentially interacting systems. In this narrative (accompanying an associated manuscript), we take a systems view of software tools themselves. Instead of using software as a single tool, we demonstrate how users can approach software with the same mindset as the organisms they study; as a complex system that can be optimized based on one’s environment and goals. We demonstrate this idea with an example KBase narrative showing how application parameters in KBase tools can change how a researcher perceives and interacts with bioinformatics tools while conducting a common experimental scenario. In this scenario we are trying to understand how different chemical compounds in a growth media change the metabolic pathways utilized in Escherichia coli.

Cashman, Mikaela↗
DOE OSTI2021

Microbial Community Field Surveys Reveal Abundant Pseudomonas Population in Sorghum Rhizosphere Composed of Many Closely Related Phylotypes

While the root-associated microbiome is typically less diverse than the surrounding soil due to both plant selection and microbial competition for plant derived resources, it typically retains considerable complexity, harboring many hundreds of distinct bacterial species. Here, we report a time-dependent deviation from this trend in the rhizospheres of field grown sorghum. In this study, 16S rRNA amplicon sequencing was used to determine the impact of nitrogen fertilization on the development of the root-associated microbiomes of 10 sorghum genotypes grown in eastern Nebraska. We observed that early rhizosphere samples exhibit a significant reduction in overall diversity due to a high abundance of the bacterial genus Pseudomonas that occurred independent of host genotype in both high and low nitrogen fields and was not observed in the surrounding soil or associated root endosphere samples. When clustered at 97% identity, nearly all the Pseudomonas reads in this dataset were assigned to a single operational taxonomic unit (OTU); however, exact sequence variant (ESV)-level resolution demonstrated that this population comprised a large number of distinct Pseudomonas lineages. Furthermore, single-molecule long-read sequencing enabled high-resolution taxonomic profiling revealing further heterogeneity in the Pseudomonas lineages that was further confirmed using shotgun metagenomic sequencing. Finally, field soil enriched with specific carbon compounds recapitulated the increase in Pseudomonas, suggesting a possible connection between the enrichment of these Pseudomonas species and a plant-driven exudate profile.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2023

The microbiome structure of decomposing plant leaves in soil depends on plant species, soil pore sizes, and soil moisture content

Microbial communities are known as the primary decomposers of all the carbon accumulated in the soil. However, how important soil structure and its conventional or organic management, moisture content, and how different plant species impact this process are less understood. To answer these questions, we generated a soil microcosm with decomposing corn and soy leaves, as well as soil adjacent to the leaves, and compared it to control samples. We then used high-throughput amplicon sequencing of the ITS and 16S rDNA regions to characterize these microbiomes. Leaf microbiomes were the least diverse and the most even in terms of OTU richness and abundance compared to near soil and far soil, especially in their bacterial component. Microbial composition was significantly and primarily affected by niche (leaves vs. soil) but also by soil management type and plant species in the fungal microbiome, while moisture content and pore sizes were more important drivers for the bacterial communities. The pore size effect was significantly dependent on moisture content, but only in the organic management type. Overall, our results refine our understanding of the decomposition of carbon residues in the soil and the factors that influence it, which are key for environmental sustainability and for evaluating changes in ecosystem functions.

16S rDNA↗
DOE OSTI2021

Sweet Sorghum Genotypes Tolerant and Sensitive to Nitrogen Stress Select Distinct Root Endosphere and Rhizosphere Bacterial Communities

The belowground microbiomes have many beneficial functions that assist plant growth, including nutrient cycling, acquisition and transport, as well as alleviation of stresses caused by nutrient limitations such as nitrogen (N). Here we analyzed the root endosphere, rhizosphere and soil bacterial communities of seven sweet sorghum genotypes differing in sensitivity to N-stress. Sorghum genotypes were grown in fields with no (low-N) or sufficient (high-N) N. The dry shoot weight ratio (low-N/high-N) was used to determine N-stress sensitivity. Our hypothesis was that genotypes tolerant and sensitive to N-stress select distinct bacterial communities. The endosphere and rhizosphere bacterial community structure were significantly different between the N-stress sensitive and tolerant genotypes in the high-N field, but not in the low-N field. However, significant changes in the relative abundance of specific bacterial taxa were observed in both fields. Streptomyces, a bacterial genus known to alleviate plant abiotic stresses, was enriched in the endosphere and rhizosphere of the tolerant genotypes in the low-N field. Our study indicates that sweet sorghum genotypes tolerant to N-stress select taxa that can potentially mitigate the N-stress, suggesting that the interactions between N-stress tolerant lines and the root-associated microbiome might be vital for coping with N-stress.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2020

Discovery of a Gamma-Ray Black Widow Pulsar by GPU-accelerated Einstein@Home

We report the discovery of 1.97 ms period gamma-ray pulsations from the 75 minute orbital-period binary pulsar now named PSR J1653-0158. The associated Fermi Large Area Telescope gamma-ray source 4FGL J1653.6-0158 has long been expected to harbor a binary millisecond pulsar. Despite the pulsar-like gamma-ray spectrum and candidate optical/X-ray associations—whose periodic brightness modulations suggested an orbit—no radio pulsations had been found in many searches. The pulsar was discovered by directly searching the gamma-ray data using the GPU-accelerated Einstein@Home distributed volunteer computing system. The multidimensional parameter space was bounded by positional and orbital constraints obtained from the optical counterpart. More sensitive analyses of archival and new radio data using knowledge of the pulsar timing solution yield very stringent upper limits on radio emission. Any radio emission is thus either exceptionally weak, or eclipsed for a large fraction of the time. The pulsar has one of the three lowest inferred surface magnetic-field strengths of any known pulsar with B surf ≈ 4 × 10 7 G. The resulting mass function, combined with models of the companion star's optical light curve and spectra, suggests a pulsar mass gsim 2 M ⊙ . The companion is lightweight with mass ~0.01 M ⊙ , and the orbital period is the shortest known for any rotation-powered binary pulsar. This discovery demonstrates the Fermi Large Area Telescope's potential to discover extreme pulsars that would otherwise remain undetected.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2025

Impact of host climate model on contrail cirrus effective radiative forcing estimates

Estimates of aviation effective radiative forcing (ERF) indicate that contrail cirrus is currently its largest contributor, although with a substantial associated uncertainty of ∼ 70 %. Here, we implement the contrail parameterisation developed for the Community Atmosphere Model (CAM) in the UK Met Office Unified Model (UM), allowing us to compare, for the first time, the impact of key features of the host climate model on contrail cirrus ERF. We find that differences in background humidity between the models result in the UM-simulated contrail fractions being 2 to 3 times larger than in CAM. Additionally, the models show contrasting responses in overall global cloud fraction, with contrails increasing the total cloud fraction in the UM and decreasing it in CAM. Differences in the complexity of the cloud microphysics schemes lead to significant differences in simulated changes to cloud ice water content due to aviation. After compensating for the unrealistically low contrail optical depth in the UM, we estimate the 2018 contrail cirrus ERF to be 40.8 mW m−2 in the UM, compared to 60.1 mW m−2 in CAM. These values highlight the substantial uncertainty in contrail cirrus ERF due to differences in microphysics and radiation schemes between the two models. We also find a factor-of-8 uncertainty in contrail cirrus ERF due to existing uncertainty in contrail cirrus optical depth. Future research should focus on better representing microphysical and radiative contrail characteristics in climate models and on improved observational constraints.

Zhang, Weiyu [University of Leeds (United Kingdom)↗
DOE OSTI2022

Axion Dark Matter

Axions are well-motivated dark matter candidates with simple cosmological production mechanisms. They were originally introduced to solve the strong CP problem, but also arise in a wide range of extensions to the Standard Model. This Snowmass white paper summarizes axion phenomenology and outlines next-generation laboratory experiments proposed to detect axion dark matter. There are vibrant synergies with astrophysical searches and advances in instrumentation including quantum-enabled readout, high-Q resonators and cavities and large high-field magnets. This white paper outlines a clear roadmap to discovery, and shows that the US is well-positioned to be at the forefront of the search for axion dark matter in the coming decade.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2022

GOOML - Real World Applications of Machine Learning in Geothermal Operations

GOOML (Geothermal Operational Optimization with Machine Learning) is a machine-learning based framework that enables geothermal power plant operators to explore optimization opportunities for their assets in an efficient and robust digital environment. Backed by real-world data sources, thermodynamic constraints and steamfield intelligence, the GOOML environment provides new tools to explore how to best operate steamfields as well as test new scenarios and configurations prior to implementation in the field. To prove the effectiveness of GOOML, we have undertaken optimization experiments using reinforcement learning (RL) to generate operational suggestions using a balance of mass-take targets, sustainability considerations and net generation. Our experiments use the GOOML construct to explore different field parameters and perform multiple reinforcement learning experiments. Like a comprehensive laboratory workbench, we can change out components of a steamfield to perform testing under a variety of conditions (restrict mass, increase pressure, reroute steam, etc.). This flexibility allows us to explore conditions that would require significant infrastructure changes in a real-world setting at a fraction of the cost and time in a digital environment. The results highlight the benefits of using digital twins and advanced data analytics for the geothermal industry.

forecasting↗