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At least 415 records · Page 23

Passive microrheology of normal and cancer cells after ML7 treatment by atomic force microscopy

Mechanical properties of living cancer and normal thyroidal cells were investigated by atomic force microscopy (AFM). Cell mechanics was compared before and after treatment with ML7, which is known to reduce myosin activity and induce softening of cell structures. We recorded force curves with extended dwell time of 6 seconds in contact at maximum forces from 500 pN to 1 nN. Data were analyzed within different frameworks: Hertz fit was applied in order to evaluate differences in Young’s moduli among cell types and conditions, while the fluctuations of the cantilever in contact with cells were analyzed with both conventional algorithms (probability density function and power spectral density) and multifractal detrended fluctuation analysis (MF-DFA). We found that cancer cells were softer than normal cells and ML7 had a substantial softening effect on normal cells, but only a marginal one on cancer cells. Moreover, we observed that all recorded signals for normal and cancer cells were monofractal with small differences between their scaling parameters. Finally, the applicability of wavelet-based methods of data analysis for the discrimination of different cell types is discussed.

62 RADIOLOGY AND NUCLEAR MEDICINE↗

Prognostics and Health Management in Nuclear Power Plants: An Updated Method-Centric Review With Special Focus on Data-Driven Methods

In a carbon-constrained world, future uses of nuclear power technologies can contribute to climate change mitigation as the installed electricity generating capacity and range of applications could be much greater and more diverse than with the current plants. To preserve the nuclear industry competitiveness in the global energy market, prognostics and health management (PHM) of plant assets is expected to be important for supporting and sustaining improvements in the economics associated with operating nuclear power plants (NPPs) while maintaining their high availability. Of interest are long-term operation of the legacy fleet to 80 years through subsequent license renewals and economic operation of new builds of either light water reactors or advanced reactor designs. Recent advances in data-driven analysis methods—largely represented by those in artificial intelligence and machine learning—have enhanced applications ranging from robust anomaly detection to automated control and autonomous operation of complex systems. The NPP equipment PHM is one area where the application of these algorithmic advances can significantly improve the ability to perform asset management. This paper provides an updated method-centric review of the full PHM suite in NPPs focusing on data-driven methods and advances since the last major survey article was published in 2015. The main approaches and the state of practice are described, including those for the tasks of data acquisition, condition monitoring, diagnostics, prognostics, and planning and decision-making. Research advances in non-nuclear power applications are also included to assess findings that may be applicable to the nuclear industry, along with the opportunities and challenges when adapting these developments to NPPs. Finally, this paper identifies key research needs in regard to data availability and quality, verification and validation, and uncertainty quantification.

22 GENERAL STUDIES OF NUCLEAR REACTORS↗

Results of the asteroid-meteoroid particle experiment on Pioneer 11

The Asteroid-Meteoroid Detector, an electro-optical instrument that detects and measures particles in space by sensing the sunlight reflected from them, is part of the payload of both the Pioneer 10 and 11 spacecraft. The Pioneer 11 instrument is essentially identical to that on Pioneer 10, with some minor modifications. Reduction of the Pioneer 11 data was complicated by the failure of one of the four sensor channels at about 1.1 AU from the sun. Detailed analysis yielded 51 events between 1.0 and 3.5 AU, which were used to determine the particle concentration distribution in that region of space. Weighted curve-fitting of the results shows agreement with the concentrations derived from Pioneer 10 to within about a factor of two. As with the Pioneer 10 results, the exponent of the size dependency varies from about -1.7 for 100-micron radius particles to about -3.2 for 10-cm bodies. The instrument, its operation, and the method of data analysis are reviewed.

Soberman, R. K.↗

Robust Period Estimation Using Mutual Information for Multiband Light Curves in the Synoptic Survey Era

The Large Synoptic Survey Telescope (LSST) will produce an unprecedented amount of light curves using six optical bands. Robust and efficient methods that can aggregate data from multidimensional sparsely sampled time-series are needed. Here, we present a new method for light curve period estimation based on quadratic mutual information (QMI). The presented method does not assume a particular model for the light curve nor its underlying probability density and it is robust to non-Gaussian noise and outliers. By combining the QMI from several bands the true period can be estimated even when no single-band QMI yields the period. Period recovery performance as a function of average magnitude and sample size is measured using 30,000 synthetic multiband light curves of RR Lyrae and Cepheid variables generated by the LSST Operations and Catalog simulators. The results show that aggregating information from several bands is highly beneficial in LSST sparsely sampled time-series, obtaining an absolute increase in period recovery rate up to 50%. We also show that the QMI is more robust to noise and light curve length (sample size) than the multiband generalizations of the Lomb–Scargle and AoV periodograms, recovering the true period in 10%–30% more cases than its competitors. A python package with efficient Cython implementations of the QMI and other methods is provided.

79 ASTRONOMY AND ASTROPHYSICS↗

Weak lensing magnification in the Dark Energy Survey Science Verification data

In this paper the effect of weak lensing magnification on galaxy number counts is studied by cross-correlating the positions of two galaxy samples, separated by redshift, using data from the Dark Energy Survey Science Verification dataset. The analysis is carried out for two photometrically-selected galaxy samples, with mean photometric redshifts in the $0.2 < z < 0.4$ and $0.7 < z < 1.0$ ranges, in the riz bands. A signal is detected with a $3.5\sigma$ significance level in each of the bands tested, and is compatible with the magnification predicted by the $\Lambda$CDM model. After an extensive analysis, it cannot be attributed to any known systematic effect. The detection of the magnification signal is robust to estimated uncertainties in the outlier rate of the pho- tometric redshifts, but this will be an important issue for use of photometric redshifts in magnification mesurements from larger samples. In addition to the detection of the magnification signal, a method to select the sample with the maximum signal-to-noise is proposed and validated with data.

79 ASTRONOMY AND ASTROPHYSICS↗

Structure in the 3D Galaxy Distribution: III. Fourier Transforming the Universe: Phase and Power Spectra

We demonstrate the effectiveness of a relatively straightforward analysis of the complex 3D Fourier transform of galaxy coordinates derived from redshift surveys. Numerical demonstrations of this approach are carried out on a volume-limited sample of the Sloan Digital Sky Survey redshift survey. The direct unbinned transform yields a complex 3D data cube quite similar to that from the Fast Fourier Transform (FFT) of finely binned galaxy positions. In both cases deconvolution of the sampling window function yields estimates of the true transform. Simple power spectrum estimates from these transforms are roughly consistent with those using more elaborate methods. The complex Fourier transform characterizes spatial distributional properties beyond the power spectrum in a manner different from (and we argue is more easily interpreted than) the conventional multi-point hierarchy. We identify some threads of modern large scale inference methodology that will presumably yield detections in new wider and deeper surveys.

Galactic clusters↗

Structure in the 3D Galaxy Distribution. III. Fourier Transforming the Universe: Phase and Power Spectra

We demonstrate the effectiveness of a relatively straightforward analysis of the complex 3D Fourier transform of galaxy coordinates derived from redshift surveys. Numerical demonstrations of this approach are carried out on a volume-limited sample of the Sloan Digital Sky Survey redshift survey. The direct unbinned transform yields a complex 3D data cube quite similar to that from the Fast Fourier Transform of finely binned galaxy positions. In both cases, deconvolution of the sampling window function yields estimates of the true transform. Simple power spectrum estimates from these transforms are roughly consistent with those using more elaborate methods. The complex Fourier transform characterizes spatial distributional properties beyond the power spectrum in a manner different from (and we argue is more easily interpreted than) the conventional multipoint hierarchy. We identify some threads of modern large-scale inference methodology that will presumably yield detections in new wider and deeper surveys.

Galaxies↗

A multifrequency characterization of the extragalactic hard X-ray sky

Context: Nowadays, we know that the origin of the cosmic X-ray background (CXB) is mainly due to the integrated emission of active galactic nuclei. Therefore, in order to obtain a precise estimate of the contribution of different source classes to the CXB, it is crucial to achieve full characterization of the hard-X ray sky. Aims: We present a multifrequency analysis of all sources listed in the third release of the Palermo Swift-BAT hard X-ray catalog (3PBC) with the goal of (i) identifying and classifying the largest number of sources adopting multifrequency criteria, with particular emphasis on extragalactic populations and (ii) extracting sources belonging to the class of Seyfert galaxies to present here the release of the second version of the Turin-SyCAT. Methods: We outline a classification scheme based on radio, infrared (IR), and optical criteria that allows us to distinguish between unidentified and unclassified hard X-ray sources, as well as to classify those sources belonging to the Galactic and the extragalactic populations. Results: Our revised version of the 3PBC lists 1176 classified, 820 extragalactic, and 356 Galactic sources, as well as 199 unclassified and 218 unidentified sources. According to our analysis, the hard X-ray sky is mainly populated by Seyfert galaxies and blazars. For the blazar population, we report trends between the hard X-ray and the gamma-ray emissions based on the fact that a large fraction of them also have a counterpart detected by the Fermi satellite. These trends are all in agreement with the expectations of inverse Compton models which are widely adopted to explain the blazar broadband emission. For the Seyfert galaxies, we present the second version of the Turin-SyCAT, including a total of 633 Seyfert galaxies, with 282 new sources corresponding to an increase of ~80% with respect to the previous release. Comparing the hard X-ray and the infrared emissions of Seyfert galaxies, we confirm that there is no clear difference between the flux distribution of the infrared-to-hard X-ray flux ratio of Seyfert galaxies Type 1 and Type 2. However, there is a significant trend between the mid-IR flux and hard X-ray flux, confirming previous statistical results in the literature. Conclusions: We provide two catalog tables. The first is the revised version of the 3PBC catalog based on our multifrequency analyses. The second catalog table is a release of the second version of the Turin-SyCAT catalog. Finally, we highlight that extensive soft X-ray data are already available in the form of the Swift archive which can be used to search for potential counterparts of unidentified hard X-ray sources. All these datasets will be reduced and analyzed in a forthcoming analysis to determine the precise position of low-energy counterparts in the 0.5–10 keV energy range for 3PBC sources that can be targets of future optical spectroscopic campaigns; this is necessary to obtain their precise classification.

79 ASTRONOMY AND ASTROPHYSICS↗

High pressure thermoelasticity and sound velocities of Fe-Ni-Si alloys

The Earth's iron-dominant core is known to contain nickel from cosmochemical analysis and some amount of light elements from geophysical constraints on density and seismic wave velocities. Although there have been several studies to constrain thermoelastic properties of iron-alloys, there has been no systematic study on the effects of nickel and light elements on properties of iron using the same experimental methods and data analysis approach. We conducted nuclear resonant inelastic X-ray scattering and X-ray diffraction experiments on body-centered cubic and hexagonal close-packed (hcp) Fe 0.91 Ni 0.09 and Fe 0.8 Ni 0.1 Si 0.1 up to 104 GPa and 86 GPa, respectively, and compare to similar measurements conducted on hcp-Fe up to 171 GPa. Specifically, we determine the Debye sound velocity from the low-energy transfer region of the (partial) phonon density of states (DOS) using the equation of state determined for each material and a new approach which utilizes information criteria and probability distributions. Nickel decreases the shear velocity of iron, while 10 at% Si has little to no effect on the shear velocity of Fe 0.91 Ni 0.09 . We observe that the shape of the phonon DOS of these alloys remains similar with increasing pressure. In the measured compression range, we therefore apply a generalized scaling law to describe the volume dependence of the phonon DOS and find that the vibrational Grüneisen parameters of hcp-Fe 0.91 Ni 0.09 are nearly indistinguishable from those hcp-Fe and those for Fe 0.8 Ni 0.1 Si 0.1 trend lower. From the vibrational free energy, we constrain the harmonic vibrational component of thermal pressure, which shows a significant positive deviation from theoretical calculations of hcp-Fe at pressures and temperatures of Earth's core. Collectively, our results demonstrate that the effects of nickel should be considered when modeling iron-rich planetary cores.

36 MATERIALS SCIENCE↗

Extracting enzyme processivity from kinetic assays

A steady-state analysis for the catalytic turnover of molecules containing two substrate sites is presented. A broad class of Markovian dynamic models, motivated by the action of DNA modifying enzymes and the rich variety of translocation mechanisms associated with these systems (e.g., sliding, hopping, intersegmental transfer, etc.), is considered. The modeling suggests an elementary and general method of data analysis, which enables the extraction of the enzyme’s processivity directly and unambiguously from experimental data. This analysis is not limited to the initial velocity regime. The predictions are validated both against detailed numerical models and by revisiting published experimental data for EcoRI endonuclease acting on DNA.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

The Alcock–Paczynski effect from Lyman- α forest correlations: analysis validation with synthetic data

The three-dimensional distribution of the Ly α forest has been extensively used to constrain cosmology through measurements of the baryon acoustic oscillations (BAO) scale. However, more cosmological information could be extracted from the full shapes of the Ly α forest correlations through the Alcock–Paczynski (AP) effect. In this work, we prepare for a cosmological analysis of the full shape of the Ly α forest correlations by studying synthetic data of the extended Baryon Oscillation Spectroscopic Survey (eBOSS). We use a set of 100 eBOSS synthetic data sets in order to validate such an analysis. These mocks undergo the same analysis process as the real data. We perform a full-shape analysis on the mean of the correlation functions measured from the 100 eBOSS realizations, and find that our model of the Ly α correlations performs well on current data sets. We show that we are able to obtain an unbiased full-shape measurement of D M /D H (z eff ), where D M is the transverse comoving distance, D H is the Hubble distance, and z eff is the effective redshift of the measurement. We test the fit over a range of scales, and decide to use a minimum separation of r min = 25 h –1 Mpc. Here, we also study and discuss the impact of the main contaminants affecting Ly α forest correlations, and give recommendations on how to perform such analysis with real data. While the final eBOSS Ly α BAO analysis measured D M /D H (z eff = 2.33) with 4 per cent statistical precision, a full-shape fit of the same correlations could provide an $\sim 2~{{\ \rm per\ cent}}$ measurement.

79 ASTRONOMY AND ASTROPHYSICS↗

Landscaper v1

Understanding the inner workings of machine learning models through their loss landscapes offers crucial insights into model properties, optimization dynamics, and generalizability. However, accessing these insights has traditionally required specialized mathematical expertise, limiting broader adoption. Landscaper is an open-source Python package designed to bridge this gap. Landscaper seamlessly integrates a suite of multi-dimensional loss landscape analyses with cutting-edge topological data analysis (TDA) methods. This powerful combination makes both fundamental loss landscape analysis and advanced TDA techniques accessible to the broader scientific ML community, without requiring deep pre-existing mathematical knowledge. Landscaper offers three key functionalities: * Construction: Builds detailed loss landscape representations through versatile low and high-dimensional sampling techniques. * Quantification: Applies advanced metrics, including a novel topological data analysis (TDA) based smoothness metric, enabling new perspectives on model behavior. * Visualization: Offers intuitive tools to visualize and interpret loss landscapes, providing actionable insights beyond traditional performance metrics.

Weber, Gunther [Lawrence Berkeley National Laborat↗

An in situ USAXS–SAXS–WAXS study of precipitate size distribution evolution in a model Ni-based alloy

Intermetallic γ' precipitates typically strengthen nickel-based superalloys. The shape, size and spatial distribution of strengthening precipitates critically influence alloy strength, while their temporal evolution characteristics determine the high-temperature alloy stability. Combined ultra-small-, small- and wide-angle X-ray scattering (USAXS–SAXS–WAXS) analysis can be used to evaluate the temporal evolution of an alloy's precipitate size distribution (PSD) and phase structure during in situ heat treatment. Analysis of PSDs from USAXS–SAXS data employs either least-squares fitting of a preordained PSD model or a maximum entropy (MaxEnt) approach, the latter avoiding a priori definition of a functional form of the PSD. However, strong low- q scattering from grain boundaries and/or structure factor effects inhibit MaxEnt analysis of typical alloys. Lastly, this work describes the extension of Bayesian–MaxEnt analysis methods to data exhibiting structure factor effects and low- q power law slopes and demonstrates their use in an in situ study of precipitate size evolution during heat treatment of a model Ni–Al–Si alloy.

36 MATERIALS SCIENCE↗

Program of research in flight dynamics in the JIAFS at NASA-Langley Research Center

The program objectives are fully defined in the original proposal entitled 'Program of Research in Flight Dynamics in the Joint Institute for the Advancement of Flight Sciences (JIAFS) at NASA-Langley Research Center,' which was originated March 20, 1975 and in the renewal of the research program dated December 1, 1991. The program includes four major topics: (1) the improvement of existing methods and development of new methods for flight test data analysis; (2) the application of these methods to real flight test data obtained from advanced airplanes; (3) the correlation of flight results with wind tunnel measurements; and (4) the modeling, and control of aircraft, space structures, and spacecraft.

Source record↗

Galactic cosmic ray gradients, field-aligned and latitudinal, among Voyagers 1/2 and IMP-8

The present investigation represents a summary of a comprehensive analysis of the same subject conducted by Roelof et al. (1981). It is pointed out that the tandem earth-Jupiter trajectories of the Voyager 1/2 spacecraft, combined with baseline measurements from the earth-orbiting IMP 7/8 spacecraft, provide the first opportunity for unambiguously separating latitude from radial or field-aligned effects in galactic cosmic ray gradients. Attention is given to the method of data analysis, and the separation of field-aligned and latitudinal gradients. It is found that latitudinal gradients approximately equal to or greater than 1 percent per deg in the cosmic ray intensity were a common feature of the interplanetary medium between 1 and 5 AU in 1977-78. Except in the most disturbed periods, cosmic ray intensities are well-ordered in field-aligned structures.

Roelof, E. C.↗

Investigation of atmospheric waves on Neptune

This document constitutes the final report for grant NAGW-2442 of the Neptune Data Analysis Program, which supported research concerning atmospheric dynamics on Neptune. Professor Von R. Eshleman was the principal investigator. David P. Hinson was a Co-Investigator. The grant covered the period 1 March 1991 through 31 August 1994, including a six month no-cost extension. Funding from this grant resulted in publication of one journal article and one book chapter as well as presentation of results at two conferences and in numerous seminars. A complete bibliography is given below. A copy of the journal article is attached along with abstracts from the book chapter and the conference presentations. With support from this grant we extended our analysis and interpretation of the Voyager Project. This research contributed to an improvement in our basic understanding of atmospheric dynamics on Neptune. The highlight was the discovery and characterization of inertio-gravity waves in the troposphere and stratosphere. Results include measures of basic wave properties, such as amplitudes and vertical wavelengths, as well as estimates of the effect of the waves on the photochemistry and momentum balance of the stratosphere. This investigation also yielded a better understanding of the potential of radio occultation experiments for studies of atmospheric waves. At the same time we developed new methods of data analysis for exploiting these capabilities. These are currently being applied to radio occultation data obtained with the Magellan spacecraft to study waves in the atmosphere of Venus. Future planetary missions, such as Mars Global Surveyor and Cassini, will benefit from these accomplishments.

Eshleman, Von R.↗

The LLNL Program in Nuclear Structure and Nuclear Astrophysics (NSNA) (FY19 Annual Report)

Our major efforts in FY18-19 were devoted to carrying out the second GRETINA/CHICO2 campaign at ANL and the JANUS campaign at MSU/NSCL. Among a total of 13 fielded experiments, three were for Ph.D. thesis projects; two students at MSU and one at UNC at Chapel Hill. Two experiments in the JANUS campaign were led by LLNL; namely, the study of nuclear structure in 72 Se and 76 Se using the sub-barrier Coulomb excitation method. The data analysis was completed for both selenium isotopes and the results were published. The 72 Se results have been submitted to DOE/SC/NP as a science highlight and the article won a prestigious LLNL S&T Excellence in Publication Award in FY19. For experiments fielded in FY17 at TRIUMF/ISAC2 using TIGRESS/Bambino, the data analysis was completed recently and the 21 Mg results were published in FY19. For the results on the mirror nuclei 23 Mg and 23 Na, the manuscript was written and is in circulation among the coauthors. We intend to submit it for publication later this calendar year. These efforts address the isospin symmetry in the sd shell nuclei in terms of the electromagnetic properties measured with the sub-barrier Coulomb excitation method. The proposal to upgrade CHICO2 to CHICOX by resizing the detector chamber to be compatible to GRETA was approved in FY17 with a budget spread over three fiscal years starting FY18. The preliminary design was completed but cannot be finalized until the design for the GRETA holding frame is completed by the LBNL GRETA team in FY19. The fabrication will proceed once the physical compatibility of CHICOX to GRETA holding frame is confirmed. The narrative below focuses on the research efforts for which LLNL led or played a key role. This report includes two sections: 1) Evolution of shell structure and collectivity in neutron-rich nuclei, and 2) Investigating nucleosynthesis and the Standard Model with β decay.

42 ENGINEERING↗

J-PLUS: Support vector regression to measure stellar parameters

Stellar parameters are among the most important characteristics in studies of stars which, in traditional methods, are based on atmosphere models. However, time, cost, and brightness limits restrain the efficiency of spectral observations. The Javalambre Photometric Local Universe Survey (J-PLUS) is an observational campaign that aims to obtain photometry in 12 bands. Owing to its characteristics, J-PLUS data have become a valuable resource for studies of stars. Machine learning provides powerful tools for efficiently analyzing large data sets, such as the one from J-PLUS, and enables us to expand the research domain to stellar parameters. The main goal of this study is to construct a support vector regression (SVR) algorithm to estimate stellar parameters of the stars in the first data release of the J-PLUS observational campaign. The training data for the parameter's regressions are featured with 12-waveband photometry from J-PLUS and are crossidentified with spectrum-based catalogs. These catalogs are from the Large Sky Area Multi-Object Fiber Spectroscopic Telescope, the Apache Point Observatory Galactic Evolution Experiment, and the Sloan Extension for Galactic Understanding and Exploration. We then label them with the stellar effective temperature, the surface gravity, and the metallicity. Ten percent of the sample is held out to apply a blind test. We develop a new method, a multi-model approach, in order to fully take into account, the uncertainties of both the magnitudes and the stellar parameters. The method utilizes more than 200 models to apply the uncertainty analysis. We present a catalog of 2 493 424 stars with the root mean square error of 160 K in the effective temperature regression, 0.35 in the surface gravity regression, and 0.25 in the metallicity regression. We also discuss the advantages of this multi-model approach and compare it to other machine-learning methods.

79 ASTRONOMY AND ASTROPHYSICS↗