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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 415 records · Page 23
All sourcesNASA NTRSDOE OSTI
DOE OSTI2015

Multi-analyte analysis of saliva biomarkers as predictors of periodontal and pre-implant disease

The present invention relates to methods of measuring biomarkers to determine the probability of a periodontal and/or peri-implant disease. More specifically, the invention provides a panel of biomarkers that, when used in combination, can allow determination of the probability of a periodontal and/or peri-implant disease state with extremely high accuracy.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2016

Molecular predictors of therapeutic response to specific anti-cancer agents

Herein is described the use of a collection of 50 breast cancer cell lines to match responses to 77 conventional and experimental therapeutic agents with transcriptional, proteomic and genomic subtypes found in primary tumors. Almost all compounds produced strong differential responses across the cell lines produced responses that were associated with transcriptional and proteomic subtypes and produced responses that were associated with recurrent genome copy number abnormalities. These associations can now be incorporated into clinical trials that test subtype markers and clinical responses simultaneously.

59 BASIC BIOLOGICAL SCIENCES↗
NASA NTRS2007

Advanced Control Algorithms for Compensating the Phase Distortion Due to Transport Delay in Human-Machine Systems

The desire to create more complex visual scenes in modern flight simulators outpaces recent increases in processor speed. As a result, simulation transport delay remains a problem. New approaches for compensating the transport delay in a flight simulator have been developed and are presented in this report. The lead/lag filter, the McFarland compensator and the Sobiski/Cardullo state space filter are three prominent compensators. The lead/lag filter provides some phase lead, while introducing significant gain distortion in the same frequency interval. The McFarland predictor can compensate for much longer delay and cause smaller gain error in low frequencies than the lead/lag filter, but the gain distortion beyond the design frequency interval is still significant, and it also causes large spikes in prediction. Though, theoretically, the Sobiski/Cardullo predictor, a state space filter, can compensate the longest delay with the least gain distortion among the three, it has remained in laboratory use due to several limitations. The first novel compensator is an adaptive predictor that makes use of the Kalman filter algorithm in a unique manner. In this manner the predictor can accurately provide the desired amount of prediction, while significantly reducing the large spikes caused by the McFarland predictor. Among several simplified online adaptive predictors, this report illustrates mathematically why the stochastic approximation algorithm achieves the best compensation results. A second novel approach employed a reference aircraft dynamics model to implement a state space predictor on a flight simulator. The practical implementation formed the filter state vector from the operator s control input and the aircraft states. The relationship between the reference model and the compensator performance was investigated in great detail, and the best performing reference model was selected for implementation in the final tests. Theoretical analyses of data from offline simulations with time delay compensation show that both novel predictors effectively suppress the large spikes caused by the McFarland compensator. The phase errors of the three predictors are not significant. The adaptive predictor yields greater gain errors than the McFarland predictor for short delays (96 and 138 ms), but shows smaller errors for long delays (186 and 282 ms). The advantage of the adaptive predictor becomes more obvious for a longer time delay. Conversely, the state space predictor results in substantially smaller gain error than the other two predictors for all four delay cases.

Guo, Liwen↗
DOE OSTI2015

Uncertainty quantification for radiation measurements: Bottom-up error variance estimation using calibration information

One example of top-down uncertainty quantification (UQ) involves comparing two or more measurements on each of multiple items. One example of bottom-up UQ expresses a measurement result as a function of one or more input variables that have associated errors, such as a measured count rate, which individually (or collectively) can be evaluated for impact on the uncertainty in the resulting measured value. In practice, it is often found that top-down UQ exhibits larger error variances than bottom-up UQ because some error sources are present in the fielded assay methods used in top-down UQ that are not present (or not recognized) in the assay studies used in bottom-up UQ One would like better consistency between the two approaches in order to claim understanding of the measurement process. The purpose of this paper is to refine bottom-up uncertainty estimation by using calibration information so that if there are no unknown error sources, the refined bottom-up uncertainty estimate will agree with the top-down uncertainty estimate to within a specified tolerance. Then, in practice, if the top-down uncertainty estimate is larger than the refined bottom-up uncertainty estimate by more than the specified tolerance, there must be omitted sources of error beyond those predicted from calibration uncertainty. The paper develops a refined bottom-up uncertainty approach for four cases of simple linear calibration: (1) inverse regression with negligible error in predictors, (2) inverse regression with non negligible error in predictors, (3) classical regression followed by inversion with negligible error in predictors, and (4) classical regression followed by inversion with non-negligible errors in predictors. Our illustrations are of general interest, but are drawn from our experience with nuclear material assay by non-destructive assay. The main example we use is gamma spectroscopy that applies the enrichment meter principle. Previous papers that ignore error in predictors have shown a tendency for inverse regression to have lower error variance than classical regression followed by inversion. Our paper supports that tendency both with and without error in predictors. Furthermore, the paper shows that calibration parameter estimates using error in predictor methods perform worse than without using error in predictor methods in the case of inverse regression, but perform better than without using error in predictor methods in the case of classical regression followed by inversion. Both inverse and classical regression involve the ratio of dependent random variables; therefore, the assumed error distribution(s) will matter in parameter estimation and in uncertainty calculations. Mainly for that reason, calibration using a single predictor is distinct from simple regression, and it has not been thoroughly treated in the literature, nor in the ISO Guide to the Expression of Uncertainty in Measurements (GUM). This refined approach is based on simulation, because we illustrate that analytical approximations are not adequate when there are, for example, 10 or fewer calibration measurements, which is common in calibration applications, each consisting of measured responses from known quantities.

11 NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗
DOE OSTI2019

A hierarchical analysis of the impact of methodological decisions on statistical downscaling of daily precipitation and air temperatures

Despite the widespread application of statistical downscaling tools, uncertainty remains regarding the role of model formulation in determining model skill for daily maximum and minimum temperature (Tmax and Tmin), and precipitation occurrence and intensity. Impacts of several key aspects of statistical transfer function form on model skill are evaluated using a framework resistant to model overspecification. We focus on: (a) model structure: simple (generalized linear models, GLMs) versus complex (artificial neural networks, ANNs) models. (b) Predictor selection: Fixed number of predictors chosen a priori versus stepwise selection of predictors and inclusion of grid point values versus predictors derived from application of principal components analysis (PCA) to spatial fields. We also examine the influence of domain size on model performance. For precipitation downscaling, we consider the role of the threshold used to characterize a wet day and apply three approaches (Poisson and Gamma distributions in GLM and ANN) to downscale wet-day precipitation amounts. While no downscaling formulation is optimal for all predictands and at 10 locations representing diverse U.S. climates, and due to the exclusion of variance inflation all of the downscaling formulations fail to reproduce the range of observed variability, models with larger suites of prospective predictors generally have higher skill. For temperature downscaling, ANNs generally outperform GLM, with greater improvements for T min than T max . Furthermore, use of PCA-derived predictors does not systematically improve model skill, but does improve skill for temperature extremes. Model skill for precipitation occurrence generally increases as the wet-day threshold increases and models using PCA-derived predictors tend to outperform those based on grid cell predictors. Each model for wet-day precipitation intensity overestimates annual total precipitation and underestimates the proportion derived from extreme precipitation events, but ANN-based models and those with larger predictor suites tend to have the smallest bias.

54 ENVIRONMENTAL SCIENCES↗
DOE OSTI2022

Use of Physics to Improve Solar Forecast: Part II, Machine Learning and Model Interpretability

Machine learning (ML) models have been applied to forecast solar energy; however, they often lack clarity of interpretability and underlying physics. This work addresses such challenges by developing a hierarchy of ML models that gradually introduce predictors to improve the forecast accuracy based on a physics-based framework. Three ML models (ARIMA, LSTM, and XGBoost) are examined and compared with four physics-informed persistence models reported in Part I and the simple persistence model to assess the improvement of different models. The 7-year measurements at the U.S. Department of Energy's Atmospheric Radiation Measurement's Southern Great Plains Central Facility site are used for forecasts and evaluations. The results reveal that the step-by-step introduction of predictors leads to different improvements for models at different hierarchical levels. Comparison of the ML models with persistence models shows that LSTM and XGBoost outperform all the persistence models, with LSTM having the overall best performance; however, ARIMA underperforms the four physics-informed persistence models. This study demonstrates the importance and utility of incorporating physics into ML models in improving forecast accuracy by introducing a hierarchy of physics-based predictors, distinguishing predictor contributions, and enhancing the ML interpretability. The combined use of Global Horizontal Irradiance (GHI) and Direct Normal Irradiance (DNI) significantly improves the forecast accuracy compared to using individual irradiances alone because the pair contains more information on cloud-radiation interactions.

interpretability↗
DOE OSTI2021

Gap-filling eddy covariance methane fluxes: Comparison of machine learning model predictions and uncertainties at FLUXNET-CH4 wetlands

Time series of methane fluxes measured by eddy-covariance require gap-filling to estimate annual emissions. Gap-filling methane fluxes is challenging because of high variability and complex responses to multiple drivers. To date, there is no widely established gap-filling standard for methane, with regards both to the best model algorithms and predictors. In this study, we address the need for standardization by synthesizing results of gap-filling methods applied at 17 wetland sites spanning boreal to tropical regions including all major wetlands classes and two rice paddies. We introduce new procedures for: 1) creating realistic artificial gap scenarios, 2) training and evaluating gap-filling models without overstating performance, and 3) predicting half-hourly methane fluxes and annual emissions with robust uncertainty estimates. We tested a conventional method (marginal distribution sampling) and four machine learning algorithms - penalized linear regression, artificial neural networks, random forests, and boosted decision trees - and four predictor sets, including temporal, meteorological, ecosystem carbon and energy flux, and soil predictors. We find that the conventional method can achieve similar median performance to the machine learning models but is worse than the best machine learning models and relatively insensitive to predictor choices. Of the machine learning models, decision tree algorithms performed the best in cross-validation experiments, even with a baseline predictor set, and artificial neural networks showed comparable performance when using all predictors. Soil temperature was frequently the most important predictor whilst water table depth was important at sites with substantial water table fluctuations, highlighting the value of data on soil conditions. Raw gap-filling uncertainties from the machine learning models were underestimated and we propose a method to calibrate uncertainties to observations. Finally, we gap-fill and provide summary evaluation metrics for all 81 sites in the FLUXNET-CH4 community dataset and publicly release the python code for model development, evaluation, and uncertainty estimation.

42 ENGINEERING↗
NASA NTRS2000

Prediction of thrombus-related mechanical prosthetic valve dysfunction using transesophageal echocardiography

Identification of thrombus-related mechanical prosthetic valve dysfunction (MPVD) has important therapeutic implications. We sought to develop an algorithm, combining clinical and echocardiographic parameters, for prediction of thrombus-related MPVD in a series of 53 patients (24 men, age 52 +/- 16 years) who had intraoperative diagnosis of thrombus or pannus from 1992 to 1997. Clinical and echocardiographic parameters were analyzed to identify predictors of thrombus and pannus. Prevalence of thrombus and diagnostic yields relative to the number of predictors were determined. There were 22 patients with thrombus, 19 patients with pannus, and 12 patients with both. Forty-two of 53 masses were visualized using transesophageal echocardiography (TEE), including 29 of 34 thrombi or both thrombi and panni and 13 of 19 isolated panni. Predictors of thrombus or mixed presentation include mobile mass (p = 0.009), attachment to occluder (p = 0.02), elevated gradients (p = 0.04), and an international normalized ratio of < or = 2.5 (p = 0.03). All 34 patients with thrombus or mixed presentation had > or = 1 predictor. The prevalence of thrombus in the presence of < or = 1, 2, and > or = 3 predictors is 14%, 69%, and 91%, respectively. Thus, TEE is sensitive in the identification of abnormal mass in the setting of MPVD. An algorithm based on clinical and transesophageal echocardiographic predictors may be useful to estimate the likelihood of thrombus in the setting of MPVD. In the presence of > or = 3 predictors, the probability of thrombus is high.

NASA Discipline Cardiopulmonary↗
NASA NTRS2005

A Comprehensive Study of Three Delay Compensation Algorithms for Flight Simulators

This paper summarizes a comprehensive study of three predictors used for compensating the transport delay in a flight simulator; The McFarland, Adaptive and State Space Predictors. The paper presents proof that the stochastic approximation algorithm can achieve the best compensation among all four adaptive predictors, and intensively investigates the relationship between the state space predictor s compensation quality and its reference model. Piloted simulation tests show that the adaptive predictor and state space predictor can achieve better compensation of transport delay than the McFarland predictor.

Guo, Liwen↗
DOE OSTI2015

Transferability in the future climate of a statistical downscaling method for precipitation in France

A statistical downscaling approach for precipitation in France based on the analog method and its evaluation for different combinations of predictors is described, with a focus on the transferability of the method to the future climate. First, the realism of downscaled present-day precipitation climatology and inter-annual variability for different combinations of predictors from four reanalyses is assessed. Satisfactory results are obtained but elaborated predictors do not lead to major and consistent across reanalyses improvements. The downscaling method is then evaluated on its capacity to capture precipitation trends in the last decades. As uncertainties in downscaled trends due to the choice of the reanalysis are large andobserved trends are weak, this analysis does not lead to strong conclusions on the applicability of the method to a changing climate. The temporal transferability is then assessed thanks to a perfect-model framework. The statistical downscaling relationship is built using present-day predictors and precipitation simulated by twelve regional climate models. The entire projections are then downscaled, and future downscaled and simulated precipitation changes are compared. A good temporal transferability is obtained only with a specific combination of predictors. Finally, the regional climate models are downscaled thanks to the relationship built with reanalyses and observations, for the best combination of predictors. Results are similar to the changes simulated by the models, which reinforces our confidence in the realism of the models and of the downscaling method. Uncertainties in precipitation change due to reanalyses are found to be limited compared to those due to regional simulations.

54 ENVIRONMENTAL SCIENCES↗