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At least 433 records · Page 24

Droplet bioprinting of acellular and cell-laden structures at high-resolutions

Advances in digital light projection(DLP) based (bio) printers have made printing of intricate structures at high resolution possible using a wide range of photosensitive bioinks. A typical setup of a DLP bioprinter includes a vat or reservoir filled with liquid bioink, which presents challenges in terms of cost associated with bioink synthesis, high waste, and gravity-induced cell settling, contaminations, or variation in bioink viscosity during the printing process. Here, we report a vat-free, low-volume, waste-free droplet bioprinting method capable of rapidly printing 3D soft structures at high resolution using model bioinks and model cells. A multiphase many-body dissipative particle dynamics model was developed to simulate the dynamic process of droplet-based DLP printing and elucidate the roles of surface wettability and bioink viscosity. Process variables such as light intensity, photo-initiator concentration, and bioink formulations were optimized to print 3D soft structures (∼0.4–3 kPa) with a typical layer thickness of 50 µm, an XY resolution of 38 ± 1.5 μm and Z resolution of 237 ± 5.4 µm. To demonstrate its versatility, droplet bioprinting was used to print a range of acellular 3D structures such as a lattice cube, a Mayan pyramid, a heart-shaped structure, and a microfluidic chip with endothelialized channels. Droplet bioprinting, performed using model C3H/10T1/2 cells, exhibited high viability (90%) and cell spreading. Additionally, microfluidic devices with internal channel networks lined with endothelial cells showed robust monolayer formation while osteoblast-laden constructs showed mineral deposition upon osteogenic induction. Overall, droplet bioprinting could be a low-cost, no-waste, easy-to-use, method to make customized bioprinted constructs for a range of biomedical applications.

DLP↗

The solar wind and magnetospheric dynamics

The dynamic processes involved in the interaction between the solar wind and the earth's magnetosphere are reviewed. The evolution of models of the magnetosphere is first surveyed. The existence of the auroral substorm and the cyclical polar magnetic substorm is evidence that the magnetosphere is a dynamic system. The dynamic changes occurring in the magnetosphere, including erosion of the magnetopause, changes in the size of the polar cap, variations in the flaring angle of the tail, neutral point formation, plasma sheet motions, and the inward collapse of the midnight magnetosphere, are discussed. The cyclical variations of geomagnetic activity are explained in terms of the control of the solar wind-magnetosphere interaction by the north-south component of the interplanetary magnetic field. Present phenomenological models allow prediction of geomagnetic activity from interplanetary measurements, but modeling of detailed magnetospheric processes is still in its infancy.

Russell, C. T.↗

Inclusion of nuclear quantum effects for simulations of nonlinear spectroscopy

The computation and interpretation of nonlinear vibrational spectroscopy is of vital importance for understanding a wide range of dynamical processes in molecular systems. Here, we introduce an approach to evaluate multi-time response functions in terms of multi-time double symmetrized Kubo transformed thermal correlation functions. Furthermore, we introduce a multi-time extension of ring polymer molecular dynamics to evaluate these Kubo transforms. Benchmark calculations show that the approximations are useful for short times even for nonlinear operators, providing a consistent improvement over classical simulations of multi-time correlation functions. In conclusion, the introduced methodology thus provides a practical way of including nuclear quantum effects in multi-time response functions of non-linear optical spectroscopy.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Nonlinear evolution of protostellar disks and light modulations in young stellar objects

An evolutionary model of dynamical processes in protostellar disks is described and illustrated with graphs of typical results. The effective transport mechanisms are discussed, including thermal convection, nonaxisymmetric gravitational instabilities in the outer regions of disks, and wave propagation. Consideration is then given to the stages of dynamical evolution, FU Ori outburst phenomena, unsteady accretion-disk flows, and nonlinear feedback as a mechanism to modulate mass transfer. The simulations show that mass redistribution is determined by angular-momentum transfer, which in turn is regulated by the effective viscosity generated by convectively driven turbulence. Significant mass transfer occurs as a result of mixing of infalling material with disk gas and is affected by the tidal torque associated with the growth of nonaxisymmetric disturbances in the outer disk. The time scale for disk evolution is found to be about 1 Myr.

Lin, D. N. C.↗

Expedited Real Time Processing for the NETL HYPER Cyber-Physical System (Final Report)

The primary objective of the proposed project was to provide the National Energy Technology Laboratory’s Hybrid Performance (Hyper) Facility the needed numerical methods algorithm(s), software development and implementation support to enact real time cyber-physical systems (CPSs) that simulate process dynamics on the order of five milliseconds or smaller. The proposed paths forward comprised three distinct approaches to hasten transient simulations. They fell under the numerical methods categorical options of: 1) optimizing key parameters within the facility’s pre-existing real time processing scheme; 2) introducing an “informed” processing approach wherein a priori computations expedite real time attempts; and 3) implementing alternatives to the employed explicit-implicit blended finite difference (spatio-temporal) approach. Each of these three classes were proposed independently as options for improvement, yet in some cases one class of approach could have complemented another.

20 FOSSIL-FUELED POWER PLANTS↗

Nanoscale defect evaluation framework combining real-time transmission electron microscopy and integrated machine learning-particle filter estimation

Observation of dynamic processes by transmission electron microscopy (TEM) is an attractive technique to experimentally analyze materials’ nanoscale phenomena and understand the microstructure-properties relationships in nanoscale. Even if spatial and temporal resolutions of real-time TEM increase significantly, it is still difficult to say that the researchers quantitatively evaluate the dynamic behavior of defects. Images in TEM video are a two-dimensional projection of three-dimensional space phenomena, thus missing information must be existed that makes image’s uniquely accurate interpretation challenging. Therefore, even though they are still a clustering high-dimensional data and can be compressed to two-dimensional, conventional statistical methods for analyzing images may not be powerful enough to track nanoscale behavior by removing various artifacts associated with experiment; and automated and unbiased processing tools for such big-data are becoming mission-critical to discover knowledge about unforeseen behavior. We have developed a method to quantitative image analysis framework to resolve these problems, in which machine learning and particle filter estimation are uniquely combined. The quantitative and automated measurement of the dislocation velocity in an Fe-31Mn-3Al-3Si autunitic steel subjected to the tensile deformation was performed to validate the framework, and an intermittent motion of the dislocations was quantitatively analyzed. The framework is successfully classifying, identifying and tracking nanoscale objects; these are not able to be accurately implemented by the conventional mean-path based analysis.

36 MATERIALS SCIENCE↗

Static and Dynamic Intensification of Water–Ethylene Glycol Separation Using a Dividing Wall Column

This paper makes several first-of-a-kind contributions toward “double intensification” (static/dynamic) of distillation systems, focusing in particular on the energy-intensive separation of a mixture of water and ethylene glycols. First, we demonstrate that a dividing wall column (DWC) can be an appropriate choice for separating wide-boiling zeotropic mixtures. Additionally, we show that the conventional DWC configuration where the wall is in the “middle” should be discarded in favor of a less frequently encountered “common-bottom” setup. For the mixture considered, choosing a DWC in lieu of a conventional two-column sequence can lead to over 6% energy cost savings and a 5% reduction in the number of stages compared to the conventional direct sequence two-column counterpart. The second part of this paper focuses on applying the previously introduced concept of dynamic process intensification to the DWC, the first time that such an effort is reported in the literature, to our knowledge. Here, we show that an additional 1.4% energy savings can be unlocked in this way, and confirm the stable operation of the column via dynamic simulation.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Plasma flow reactor for steady state monitoring of physical and chemical processes at high temperatures

Here, we present the development of a steady state plasma flow reactor to investigate gas phase physical and chemical processes that occur at high temperature (1000 < T < 5000 K) and atmospheric pressure. The reactor consists of a glass tube that is attached to an inductively coupled argon plasma generator via an adaptor (ring flow injector). We have modeled the system using computational fluid dynamics simulations that are bounded by measured temperatures. In situ line-of-sight optical emission and absorption spectroscopy have been used to determine the structures and concentrations of molecules formed during rapid cooling of reactants after they pass through the plasma. Emission spectroscopy also enables us to determine the temperatures at which these dynamic processes occur. A sample collection probe inserted from the open end of the reactor is used to collect condensed materials and analyze them ex situ using electron microscopy. The preliminary results of two separate investigations involving the condensation of metal oxides and chemical kinetics of high-temperature gas reactions are discussed.

36 MATERIALS SCIENCE↗

Dynamical effects on the core-mantle boundary from depth-dependent thermodynamical properties of the lower mantle

A common assumption in modeling dynamical processes in the lower mantle is that both the thermal expansivity and thermal conductivity are reasonably constant. Recent work from seismic equation of state leads to substantially higher values for the thermal conductivity and much lower thermal expansivity values in the deep mantle. The dynamical consequences of incorporating depth-dependent thermodynamic properties on the thermal-mechanical state of the lower mantle are examined with the spherical-shell mean-field equations. It is found that the thermal structure of the seismically resolved anomalous zone at the base of the mantle is strongly influenced by these variable properties and, in particular, that the convective distortion of the core-mantle boundary (CMB) is reduced with the decreasing thermal expansivity. Such a reduction of the dynamically induced topography from pure thermal convection would suggest that some other dynamical mechanism must be operating at the CMB.

Zhang, Shuxia↗

Concurrent probing of electron-lattice dephasing induced by photoexcitation in 1 T -TaSeTe using ultrafast electron diffraction

It has been technically challenging to concurrently probe the electrons and the lattices in materials during nonequilibrium processes, allowing their correlations to be determined. Here, in a single set of ultrafast electron diffraction patterns taken on the charge-density-wave (CDW) material 1T-TaSeTe, we discover a temporal shift in the diffraction intensity measurements as a function of scattering angle. With the help of dynamic models and theoretical calculations, we show that the ultrafast electrons probe both the valence-electron and lattice dynamic processes, resulting in the temporal shift measurements. Our results demonstrate unambiguously that the CDW is not merely a result of the periodic lattice deformation ever present in 1T-TaSeTe but has significant electronic origin. This method demonstrates an approach for studying many quantum effects that arise from electron-lattice dephasing in molecules and crystals for next-generation devices.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Imaging Coherent Structural Dynamics with Ultrafast Electron Microscopy

Development of ultrafast electron and X-ray scattering methods has enabled direct routes to probing atomic-scale structural dynamics. This in turn has led to new insight into lattice responses to a variety of dynamic processes associated with phase transformations, electron-lattice correlations, and nanoscale mechanical motion, to name a few. Presently, the most wide-spread approaches involve using table-top, laser-driven electron-scattering chambers or femtosecond (fs) X-ray beamlines to probe dynamics in reciprocal space and, in many instances, over specimen regions that are large relative to unit-cell dimensions and discrete (atomic and nanoscale) structural and morphological defects (e.g., vacancies, line and screw dislocations, grain boundaries, interfaces, etc.). As a result, the transients monitored for relatively large-spot-size reciprocal-space measurements – typically some aspect of a Bragg reflection (intensity, position, width, shape) – may be comprised of a range of responses occurring within the probed region. To directly resolve the role of distinct morphologies and structural features on dynamics associated with the nucleation, emergence, evolution, and decay of coherent phenomena, one would ideally directly image the local, nanoscale behaviors and precisely correlate responses to the nature of the feature. Here, I will show how such effects can be directly probed with ultrafast electron microscopy (UEM). After a brief overview of the operating principles of UEM, I will discuss how we are using real-space imaging to directly visualize coherent structural dynamics in a variety of nanostructured and nanoscale materials.

47 OTHER INSTRUMENTATION↗

Quantitative comparison of adaptive sampling methods for protein dynamics

Adaptive sampling methods, often used in combination with Markov state models, are becoming increasingly popular for speeding up rare events in simulation such as molecular dynamics (MD) without biasing the system dynamics. Several adaptive sampling strategies have been proposed, but it is not clear which methods perform better for different physical systems. Here, we present a systematic evaluation of selected adaptive sampling strategies on a wide selection of fast folding proteins. The adaptive sampling strategies were emulated using models constructed on already existing MD trajectories. We provide theoretical limits for the sampling speed-up and compare the performance of different strategies with and without using some a priori knowledge of the system. The results show that for different goals, different adaptive sampling strategies are optimal. In order to sample slow dynamical processes such as protein folding without a priori knowledge of the system, a strategy based on the identification of a set of metastable regions is consistently the most efficient, while a strategy based on the identification of microstates performs better if the goal is to explore newer regions of the conformational space. Interestingly, the maximum speed-up achievable for the adaptive sampling of slow processes increases for proteins with longer folding times, encouraging the application of these methods for the characterization of slower processes, beyond the fast-folding proteins considered here.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Marine ice sheet experiments with the Community Ice Sheet Model

Ice sheet models differ in their numerical treatment of dynamical processes. Simulations of marine-based ice are sensitive to the choice of Stokes flow approximation and basal friction law and to the treatment of stresses and melt rates near the grounding line. We study the effects of these numerical choices on marine ice sheet dynamics in the Community Ice Sheet Model (CISM). In the framework of the Marine Ice Sheet Model Intercomparison Project 3d (MISMIP3d), we show that a depth-integrated, higher-order solver gives results similar to a 3D (Blatter–Pattyn) solver. We confirm that using a grounding line parameterization to approximate stresses in the grounding zone leads to accurate representation of ice sheet flow with a resolution of ~2 km, as opposed to ~0.5 km without the parameterization. In the MISMIP+ experimental framework, we compare different treatments of sub-shelf melting near the grounding line. In contrast to recent studies arguing that melting should not be applied in partly grounded cells, it is usually beneficial in CISM simulations to apply some melting in these cells. This suggests that the optimal treatment of melting near the grounding line can depend on ice sheet geometry, forcing, or model numerics. In both experimental frameworks, ice flow is sensitive to the choice of basal friction law. To study this sensitivity, we evaluate friction laws that vary the connectivity between the basal hydrological system and the ocean near the grounding line. CISM yields accurate results in steady-state and perturbation experiments at a resolution of ~2 km (arguably 4 km) when the connectivity is low or moderate and ~1 km (arguably 2 km) when the connectivity is strong.

54 ENVIRONMENTAL SCIENCES↗

Dynamical response of the tropical total ozone to sea surface temperature changes

Interannual variations of total ozone in the equatorial region are discussed in terms of the lower-stratospheric dynamical processes associated with sea surface temperature (SST) changes on an El Nino-Southern Oscillation time scale. Tropospheric diabatic heating by the latent heat release in convective systems drives the interannual variations of tropopause height and atmospheric vertical motions. The adiabatic cooling associated with the dynamically forced ascending motion is subject to radiative heating, which further extends the upwelling motion into the stratosphere. SST variations can thus influence total ozone amounts by changing the tropopause height and vertical advection through modulation of tropospheric diabatic heating. Mechanistic relationships that describe total ozone fluctuations through the advection effect and the tropopause effect of SST variations are derived using the equivalent potential temperature. Total ozone fluctuations are estimated using a quantitative formulation of these mechanistic equations together with the observed SST data. These results indicate that the interannual variations of the zonal wave component of equatorial total ozone are governed by the tropopause effect of SST variations. Preliminary investigation suggests that the annual cycle of tropical total ozone is coupled to the tropopause height changes under the influence of the planetary wave-induced lower-stratospheric temperature rather than local SST.

Hasebe, Fumio↗

Inferring Instantaneous, Multivariate and Nonlinear Sensitivities for the Analysis of Feedback Processes in a Dynamical System: Lorenz Model Case Study

A new approach is presented for the analysis of feedback processes in a nonlinear dynamical system by observing its variations. The new methodology consists of statistical estimates of the sensitivities between all pairs of variables in the system based on a neural network modeling of the dynamical system. The model can then be used to estimate the instantaneous, multivariate and nonlinear sensitivities, which are shown to be essential for the analysis of the feedbacks processes involved in the dynamical system. The method is described and tested on synthetic data from the low-order Lorenz circulation model where the correct sensitivities can be evaluated analytically.

Aires, Filipe↗

The Kalahari sediments and hominins in southern Africa

In this study, the temporal coupling of the structural evolution of the Kalahari Basin and the accumulation of the Kalahari Group sediments has been an accepted paradigm leading to the assumption that the Kalahari group sediments have been accumulating gradually since the mid-Cretaceous. Here we review the first actual ages for the Kalahari Group based on cosmogenic ages from six geological localities. These results demonstrate that Kalahari Basin infill was a more dynamic process than previously thought and that the Kalahari Group sediments are mostly Plio-Pleistocene in age (~4 Ma to 1–2 Ma). The hiatus between the initial structural subsidence of the basin, during the Cretaceous, and the general young age of the investigated sediments, implies a dynamic landscape in which significant phases of erosion occurred during the Mesozoic and Cenozoic. The magnitude of erosion is manifested by the fact that in many locations Kalahari Neogene to Quaternary sediments overlie Precambrian basement. The age of the present infill of the Kalahari thus falls within the temporal range of the genus Homo. In light of this new understanding, we provide a review of the archaeological evidence from the Kalahari Basin and along its southern fringe. Initial hominin presence is found at Wonderwerk Cave during the Olduvai Event and there is subsequent high-density occupation along the southern fringe of the Kalahari Basin during the Acheulean and the Fauresmith. Middle Stone Age occupation is limited to localities of limited size and small artifact counts and it appears that the focus of human occupation, particularly in the later stages of the Middle Stone Age, shifts southward, including along the coastal regions.

58 GEOSCIENCES↗

Airborne Observations of the Spatial and Temporal Variability of Tropospheric Carbon Dioxide during the INTEX-B Campaign

The Intercontinental Chemical Transport Experiment-North America (INTEX-NA) is an international field campaign envisioned to investigate the transport and transformation of gases and aerosols on transcontinental/intercontinental scales and assess their impact on air quality and climate. Phase B (INTEX-B) of the mission was conducted during a 10- week period from March 1 to May 15, 2006 and focused initially on pollution outflow from the Mexico City Metropolitan Area, later addressing the transport of pollution from Asia to North America during springtime meteorological conditions. During the deployment, fast-response (1-s resolution) CO2 measurements were recorded aboard the NASA DC-8 providing valuable regional-scale information on carbon sources and sinks over sparsely sampled areas of North America and adjacent ocean basins. When coupled with the enormously sophisticated chemistry payload on the DC-8, these measurements collectively afford extremely powerful multi-tracer constraints for carbon source/sink attribution. Preliminary examination of the two data sets from the INTEX-B campaign, acquired one month apart, reveals not only the influence of the CO2 seasonal cycle, but also the preponderance of human population and industrial activity in the northern hemisphere. In this presentation, a synergy of the ensemble of airborne and surface observations, bottomup emission inventories, as well as transport history are invoked in a GIS framework to elucidate the source/sink processes reflected in the observations. The airborne CO2 data, along with simultaneous surface measurements (e.g. NOAA ESRL), are examined to establish the vertical distribution and variability of CO2 as a function of location. The role of localized sources, long-range transport, the biosphere, stratospheric exchange, and dynamical processes on the CO2 spatial variability observed throughout the tropospheric column will be discussed.

Vay, Stephanie A.↗

A Feasibility Study on Use of an Accelerometer to Measure the Dynamic Forces in Turning

Metal cutting is a highly dynamic process that generates continuously varying forces. Measurement of these forces is essential to characterizing a cutting process and to fully utilize the machine tool. A force dynamometer is often used to measure these varying forces; however, it is limited by the natural frequency of the sensor and can sometimes be hard to set up on a machine. Therefore, this study aims to estimate the dynamic component of the cutting force using an accelerometer placed directly below the cutting edge. The placement of the sensor helps achieving better signal to noise ratio (S/N). The cutting tool is modelled as a single degree of freedom (SDOF) system relative to the workpiece and dynamic loads are experimentally simulated on it. The measured acceleration is numerically integrated to obtain velocity and deflection, which along with the natural frequency (ω n ) and damping ratio (ζ), is used to predict the dynamic load using the system equation. The dynamic forces tested over a wide range of frequencies, show good agreement with the data from simultaneous dynamometer measurement and the force estimated using the proposed method. The study shows the feasibility of this method in a real cutting scenario and the capability to apply it to a multi DOF system. One major limitation is the inability to capture the static or quasi-static component of the cutting force.

Cutting vibrations↗