Vectorization for High Performance Computing
This report is an descriptionof vectorization and SIMD.
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This report is an descriptionof vectorization and SIMD.
A detailed poster of the SCinet network architecture is presented.
This project has revived the FACETS code, that has been developed under SciDAC fund- ing in 2008-2012. The code has been dormant for a number of years after the SciDAC funding stopped. FACETS depends on external packages. The external packages and libraries such as PETSc, FFTW, HDF5 and NETCDF that are included in FACETS have evolved during these years. Some packages in FACETS are also parts of other codes such as PlasmaState, NUBEAM, GACODES, and UEDGE. These packages have been also evolved together with their host codes which include TRANSP, TGYRO and XPTOR. Finally, there is also a set of packages in FACETS that are being developed and maintained by Tech-X. These packages include BILDER, SciMake, and FcioWrappers. Many of these packages evolved significantly during the last several years and FACETS had to be updated to synchronize with the re- cent progress in the external packages. The PI has introduced new changes to the BILDER package to support the updated interfaces to the external modules. During the last year of the project, the FACETS version of the UEDGE code has been extracted from FACETS as a standalone package. The PI collaborates with the scientists from LLNL on the updated UEDGE model in FACETS. Drs. T. Rognlien, M. Umansky and A. Dimits from LLNL are contributing to this task.
Achieving practical exascale supercomputing will require massive increases in energy efficiency. The bulk of this improvement will likely be derived from hardware advances such as improved semiconductor device technologies and tighter integration, hopefully resulting in more energy efficient computer architectures. Still, software will have an important role to play. With every generation of new hardware, more power measurement and control capabilities are exposed. Many of these features require software involvement to maximize feature benefits. This trend will allow algorithm designers to add power and energy efficiency to their optimization criteria. Similarly, at the system level, opportunities now exist for energy-aware scheduling to meet external utility constraints such as time of day cost charging and power ramp rate limitations. Finally, future architectures might not be able to operate all components at full capability for a range of reasons including temperature considerations or power delivery limitations. Software will need to make appropriate choices about how to allocate the available power budget given many, sometimes conflicting considerations.
The goal of this work is to establish important alloy new data from rigorous, first-principles-based computational approaches, for systems that presently lack critical data. The focus is on lightweight alloys due to their importance in energy-efficient applications for transportation and other areas, particularly for alloy compositions such as Al-Li-Ti where existing data is limited. By providing input on this class of compositions, we seek to significantly reduce the effort, expense and energy of experimental explorations of these materials.
Sandia has invested heavily in scientific/engineering application development and in the research, development, and deployment of large scale HPC platforms to support the computational needs of these applications. As application developers continually expand the capabilities of their software and spend more time on performance tuning of applications for these platforms, HPC platform resources are at a premium as they are a heavily shared resource serving the varied needs of many users. To ensure that the HPC platform resources are being used effciently and perform as designed, it is necessary to obtain reliable data on resource utilization that will allow us to investigate the occurrence, severity, and causes of performance-affecting contention between applications. The work presented in this paper was an initial step to determine if resource contention can be understood and minimized through monitoring, modeling, planning and infrastructure. This paper describes the set of metric definitions, identified in this research, that can be used as meaningful and potentially actionable indicators of performance-affecting contention between applications. These metrics were verified using the observed slowdown of IOR, IMB, and CTH in operating scenarios that forced contention. This paper also describes system/application monitoring activities that are critical to distilling vast amounts of data into quantities that hold the key to understanding for an application's performance under production conditions and that will ultimately aid in Sandia's efforts to succeed in extreme-scale computing.
This feasibility study developed numerical methods for the optimal control problem for realizing logical gates in closed quantum systems, where the evolution of the state vector is governed by the time dependent Schrodinger equation. The number of parameters in the control functions is made independent of the number of time steps by expanding them in terms of B-spline basis functions, with and without carrier waves. We use an interior point gradient-based technique from the IPOPT package to minimize the gate infidelity subject to amplitude constraints on the control functions. The symplectic Stromer-Verlet scheme is used to integrate a real-valued formulation of Schrodinger's equation in time and the gradient of the gate infidelity is obtained by solving the corresponding adjoint equation. This allows all components of the gradient to be calculated at the cost of solving three Schrodinger systems, independently of the number of parameters in the control functions. The correctness of the method is verified and applied to Hamiltonians that model the dynamics of coupled super-conducting qubits.
2018 Calendar Year in review recapping the top operational and scientific highlights and sponsor metrics of the Oak Ridge Leadership Computing Facility.
Significant effort is placed on tuning the internal parameters of fuzzers to explore the state space, measured as coverage, of binaries. In this work, we investigate the effects of the external environment on the resulting coverage after fuzzing two binaries with AFL for 24 hours. Parameters such as scaling to multiple nodes, node saturation, and parallel file system type on HPC resources are controlled in order to maximize coverage. It will be shown that employing a parallel file system such as IBM's General Parallel File System offers an advantage for fuzzing operations, since it contains enhancements for performance optimization. When combined with scaling to two and four nodes, while simultaneously restricting the number of coordinated AFL tasks per node on the low end (10-50% of available physical cores), coverage may be enhanced within a shorter period of time. Thus, controlling the external environment is a useful effort.
Bigger is often said to be better, and the newest extreme-scale computers certainly are bigger, with millions of processing units. Moreover, the breadth of science performed on the U.S. Department of Energy (DOE) computing facilities is expanding, with new technology such as artificial intelligence emerging. These advances are exciting, creating new opportunities for scientific discovery; however, they also raise new questions for scientists who want to exploit these advances for tackling more complex problems. Will my simulation code be able to utilize the accelerators in extreme-scale computing systems? Can I take advantage of the deepening memory hierarchy in heterogeneous processors? Is there a way around bottlenecks caused by the widening ratio of peak floating-point operations per second to I/0 bandwidth? How can I manage my huge amounts of data effectively? Can I analyze data in situ, or must I transfer it to offline storage for later analysis? To address such questions, DOE announced that it is providing $57.5 million over the next five years for two multidisciplinary teams — FASTMath and RAPIDS2 — to develop new tools and techniques to harness supercomputers for scientific discovery. The teams, called SciDAC Institutes, are part of the Scientific Discovery through Advanced Computing program.
This report summarizes the results of a virtual workshop sponsored by the Bioenergy Technologies Office held on June 9–11, 2020. The workshop discussed best practices for utilizing mathematical modeling tools across multiple scales to reduce technology uncertainty and accelerate scaling-up of biorefinery/chemical production equipment and optimize operations.
During the Flash process, the cross section of a plain-carbon or a low-alloy steel is austenitized through rapid heating and transformed on rapid cooling to a predominantly martensite + bainite structure with small amounts of retained austenite. Unlike conventional heat treating, homogeneity is intentionally avoided during Flash processing of steels. The Flash process assembly consists of a pair of rolls that transfer the steel sheets through the heating and cooling stage of the thermal cycle. The initial microstructure of the steel consists of ferrite (body-centered cubic iron) + carbide ((Fe,X)mCn) mixture. The heating rate through the peak temperature is a function of temperature and reaches a peak of about 300-400°C/s and the cooling rate has a maximum value of 3,000-4,000°C/s. The on-heating phase transformations include carbide dissolution, austenite (face-centered cubic iron) nucleation and growth, and diffusion of carbon and other substitutional elements in the steel. The on-cooling phase transformations include formation of martensite (body-centered tetragonal phase containing supersaturated solute) and bainite (ferrite plates with or without fine carbides). In this project, the focus is on Fe-C-Cr steels that are currently Flash processed for armor applications. The modeling effort proposed here will help optimize the Flash thermal cycle for these low alloy steels to achieve the target performance, which is an ongoing effort at SFP Works. A significant feature of Flash processed Fe-C-Cr steels is the presence of scatter in the through-thickness in the sheet. The variability in hardness results from a variability in the bainite + martensite microstructure that is sensitive to the local chemical concentration of C and Cr. Such a chemical inhomogeneity is intentionally obtained in the Flash process. Although such a microstructural gradient is presumably responsible for the exceptional properties of the Flash processed steel, it is very important to quantify the gradients as a function of Flash variabilities in processing parameters and the input microstructure. Understanding the mechanistic pathway that leads to microstructural gradients could be ground-breaking and instrumental for achieving better process control and optimized microstructural state to meet application-specific strength-ductility requirements. Since the final microstructure depends on setting up precise solute concentration gradients through a rapid heating process, and transforming these regions into various phases, it is important to understand how small changes in steel chemistry, input microstructure (carbide size and distribution), and process variables (Flash thermal cycle) will impact the solute concentration gradients.
We need such big computers because without testing, we don't understand the health of the AGING stockpile. Our big computers store a wealth of test data. We model weapons as they were tested and see if we can match the results to validate models, and we then use validated models along with dismantlement information on aging to certify the stockpile. Sometimes the results of tests can’t be explained well, so even that part requires massive computations, but applying the model to future use is an astonishing amount of computing.
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