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At least 469 records · Page 26

Thermal structure and dynamics of the Jovian atmosphere. II - Visible cloud features

Thermal structures including major white ovals, hot spot regions, barges and a belt zone pair in the Jovian atmosphere are investigated using Voyager IRIS data. Atmosphere above anticyclonic features is cold relative to the immediate surroundings in the upper troposphere and tropopause region, which is consistent with upwelling and divergence in that part of the atmosphere. Localized cyclonic features are warm relative to their surroundings which implies subsidence with accompanying convergence. Thermal wind shear indicates a decay of the vorticity with height in the upper troposphere and lower stratosphere, and vertical velocities imply an upper limit of vertical mixing times near the tropopause of about 20 years. Various possible models are also examined, including radiative heating, vertical wave propagation, and thermally indirect merdional cells.

Conrath, B. J.↗

Ca X ML: Chemistry‐informed machine learning explains mutual changes between protein conformations and calcium ions in calcium‐binding proteins using structural and topological features

Proteins' flexibility is a feature in communicating changes in cell signaling instigated by binding with secondary messengers, such as calcium ions, associated with the coordination of muscle contraction, neurotransmitter release, and gene expression. When binding with the disordered parts of a protein, calcium ions must balance their charge states with the shape of calcium-binding proteins and their versatile pool of partners depending on the circumstances they transmit. Accurately determining the ionic charges of those ions is essential for understanding their role in such processes. However, it is unclear whether the limited experimental data available can be effectively used to train models to accurately predict the charges of calcium-binding protein variants. Here, we developed a chemistry-informed, machine-learning algorithm that implements a game theoretic approach to explain the output of a machine-learning model without the prerequisite of an excessively large database for high-performance prediction of atomic charges. We used the ab initio electronic structure data representing calcium ions and the structures of the disordered segments of calcium-binding peptides with surrounding water molecules to train several explainable models. Network theory was used to extract the topological features of atomic interactions in the structurally complex data dictated by the coordination chemistry of a calcium ion, a potent indicator of its charge state in protein. Our design created a computational tool of Ca X ML, which provided a framework of explainable machine learning model to annotate ionic charges of calcium ions in calcium-binding proteins in response to the chemical changes in an environment. Our framework will provide new insights into protein design for engineering functionality based on the limited size of scientific data in a genome space.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Some features of the structure of the tropical tropopause

Statistics of the minimum saturation humidity mixing ratio are extracted from 2500 radiosonde ascents in the tropics (10 N to 10 S) and in the region of the Asian summer monsoon. Two periods of approximately 20 days are examined, one in the northern winter and one in the northern summer. The relation of the observations to an hypothesis, proposed by A. W. Brewer in 1949, of mass exchange between troposphere and stratosphere is briefly discussed.

Atticks, M. G.↗

Structural and stratigraphic features and ERS 1 synthetic aperture radar backscatter characteristics of ice growing on shallow lakes in NW Alaska, winter 1991-1992

Changes in Earth Remote-Sensing Satellite (ERS) 1 C band synthetic aperture radar (SAR) backscatter intensity (sigma(exp 0)) from ice growing on shallow tundra lakes at three locations in NW Alaska are described. Ice core analysis shows that all lakes on the coast at Barrow the ice, whether floating or frozen to the bottom, includes an inclusion-free layer overlying a layer of ice with tubular bubbles oriented parallel to the direction of growth. The clear ice may also be overlain by a discontinuous layer of bubbly snow ice. Backscatter is low (-16 to -22 dB) at the time of initial ice formation, probably due to the specular nature of the upper and lower ice surfaces causing the radar pulse to be reflected away from the radar. As the ice thickens during the autumn, backscatter rises steadily. Once the ice freezes to the lake bottom, regardless of the presence of foward scattering tubular bubbles, low backscatter values of -17 to -18 dB are caused by absorption of the radar signal in the lake bed. For ice that remains afloat all winter the ice-water interface and the tubular bubbles combine, presumably via an incoherent double-bounce mechanism, to cause maximum backscatter values of the order of -6 to -7 dB. The sigma(exp 0) saturates at -6 to -7 dB before maximum ice thickness and tubular bubble content are attained. A simple ice growth model suggests that the layer of ice with tubular bubbles need be only a few centimeters thick midway through the growth season to cause maximum backscatter from floating ice. During the spring thaw a previously unreported backscatter reversal is observed on the floating and grounded portions of the coastal lakes but not on the lakes farther inland. This reversal may be related to the ice surface topography and wetness plus the effects of a longer, cooler melt period by the coast. Time series of backscatter variations from shallow tundra lakes are a record of (1) the development of tubular bubbles in the ice and, by association, changes in the gas content of the underlying water and (2) the freezing of ice to the bottoms of the lakes and therefore lake bathymetry and water availability. SAR is also able to detect the onset of lake ice growth in autumn and the initiation of the spring thaw and thus has potential for monitoring high-altitude lake ice growth and decay processes in relation to climate variability.

Jeffries, M. O.↗

Compressive strain in Lunae Planum-shortening across wrinkle ridges

Wrinkle ridges have long been considered to be structural or structurally controlled features. Most, but not all, recent studies have converged on a model in which wrinkle ridges are structural features formed under compressive stress; the deformation being accommodated by faulting and folding. Given that wrinkle ridges are compressive tectonic features, an analysis of the associated shortening and strain provides important quantitative information about local and regional deformation. Lunae Planum is dominated by north-south trending ridges extending from Kasei Valles in the north to Valles Marineris in the south. To quantify the morphometric character, a photoclinometric study was undertaken for ridges on Lunae Planum using the Davis and Soderblom. More than 25 ridges were examined between long. 57 and 80 deg, lat. 5 to 25 deg N. For each ridge, several profiles were obtained along its length. Ridge width, total relief, and elevation offset were measured for each ridge. Analyses are given.

Plescia, J. B.↗

Stacbeam - An efficient, low-mass, sequentially deployable structure

Design features of the stacking triangular articulated compact beam (Stacbeam) as a candidate truss structure for GEOS spacecraft solar power arrays are explored. Solar arrays of increasing size require folding, noninterfering structures, minimal thermal effects, slow and controlled deployment, and a high aspect ratio. The Stacbeam consists of a triangular batten frame perpendicular to the beam axis, three longerons attached at the corners of the batten frame and mounted parallel to the beam axis, and three diagonals to provide shear and torsional stiffness. Locking hinges are installed at the midpoint and ends of each longeron and at the midpoint and ends of each diagonal. The material is graphite/epoxy composite with a 120 GPa modulus and a 1500 kg/sq m density. Successful vertical deployment on the ground has been effected with a prototype deployer, together with horizontal cantilever in a fully deployed configuration.

Adams, L. R.↗

Dataset for Leveraging CryoEM and AI-Driven Morphological Feature Analysis for Insights on Bacterial Structures

This repository hosts an AI-assisted image segmentation and analysis pipeline for Pantoea sp. YR343 cryo-electron microscopy (cryoEM) datasets. The workflow automates membrane thickness measurements, flagella detection, and field-of-view (FOV) screening from low-dose, high-resolution cryoEM micrographs eliminating the need for slow manual annotation. By integrating deep-learning based segmentation (YOLOv11) with quantitative post-processing, this toolkit provides a scalable and reproducible way to study bacterial morphology under hydrated, near-native conditions. The GitHub repository for AI-based tools for cryoEM bacteria ultrastructures can be found here: https://github.com/Sireesiru/Cryo-EM-Ultrastructures/tree/main

60 APPLIED LIFE SCIENCES↗

Method and system for data clustering for very large databases

Multi-dimensional data contained in very large databases is efficiently and accurately clustered to determine patterns therein and extract useful information from such patterns. Conventional computer processors may be used which have limited memory capacity and conventional operating speed, allowing massive data sets to be processed in a reasonable time and with reasonable computer resources. The clustering process is organized using a clustering feature tree structure wherein each clustering feature comprises the number of data points in the cluster, the linear sum of the data points in the cluster, and the square sum of the data points in the cluster. A dense region of data points is treated collectively as a single cluster, and points in sparsely occupied regions can be treated as outliers and removed from the clustering feature tree. The clustering can be carried out continuously with new data points being received and processed, and with the clustering feature tree being restructured as necessary to accommodate the information from the newly received data points.

Zhang, Tian↗

Topology and layout optimization of discrete and continuum structures

The basic features of the ground structure method for truss structure an continuum problems are described. Problems with a large number of potential structural elements are considered using the compliance of the structure as the objective function. The design problem is the minimization of compliance for a given structural weight, and the design variables for truss problems are the cross-sectional areas of the individual truss members, while for continuum problems they are the variable densities of material in each of the elements of the FEM discretization. It is shown how homogenization theory can be applied to provide a relation between material density and the effective material properties of a periodic medium with a known microstructure of material and voids.

Bendsoe, Martin P.↗

Improving the Performance of the Structure-Based Connectionist Network for Diagnosis of Helicopter Gearboxes

A diagnostic method is introduced for helicopter gearboxes that uses knowledge of the gear-box structure and characteristics of the 'features' of vibration to define the influences of faults on features. The 'structural influences' in this method are defined based on the root mean square value of vibration obtained from a simplified lumped-mass model of the gearbox. The structural influences are then converted to fuzzy variables, to account for the approximate nature of the lumped-mass model, and used as the weights of a connectionist network. Diagnosis in this Structure-Based Connectionist Network (SBCN) is performed by propagating the abnormal vibration features through the weights of SBCN to obtain fault possibility values for each component in the gearbox. Upon occurrence of misdiagnoses, the SBCN also has the ability to improve its diagnostic performance. For this, a supervised training method is presented which adapts the weights of SBCN to minimize the number of misdiagnoses. For experimental evaluation of the SBCN, vibration data from a OH-58A helicopter gearbox collected at NASA Lewis Research Center is used. Diagnostic results indicate that the SBCN is able to diagnose about 80% of the faults without training, and is able to improve its performance to nearly 100% after training.

Jammu, Vinay B.↗

Features and characterization needs of rubber composite structures

Some of the major unique features of rubber composite structures are outlined. The features covered are those related to the material properties, but the analytical features are also briefly discussed. It is essential to recognize these features at the planning stage of any long-range analytical, experimental, or application program. The development of a general and comprehensive program which fully accounts for all the important characteristics of tires, under all the relevant modes of operation, may present a prohibitively expensive and impractical task at the near future. There is therefore a need to develop application methodologies which can utilize the less general models, beyond their theoretical limitations and yet with reasonable reliability, by proper mix of analytical, experimental, and testing activities.

Tabaddor, Farhad↗

Dose-dependent structural and electron-density features in the lytic polysaccharide monooxygenase NcAA9D

Structural studies of copper-containing lytic polysaccharide monooxygenases (LPMOs) by X-ray crystallography are often complicated by radiation damage. In this study, we analyze a series of 36 X-ray crystal structures of NcAA9D, a Neurospora crassa AA9-family LPMO, determined from data collected at cryogenic temperature from a single crystal to investigate the progressive effects of radiation damage at the active site of this enzyme. We report new insights into the dose-dependence of active-site geometry in LPMOs and utilize the unique pre-bound dioxygen site of NcAA9D to analyze the impact of X-ray dose on the electron density of this species. It is well established that photoreduction of the LPMO active-site copper(II) leads to expulsion of its water ligands. We further characterize this displacement and the corresponding electron-density smearing, a phenomenon that can lead to the erroneous modeling of copper-bound dioxygen species. These findings suggest that radiation-dose series collected from a single crystal provide invaluable data to support unambiguous assignment of radiation-sensitive intermediates at the active site of LPMOs and other radiation-sensitive redox enzymes.

Miller, Samuel [ORNL] (ORCID:0009000459491817)↗

The crustal tectonics and history of Europa: A structural, morphological, and comparative analysis

An evaluation of surface features and structures on the Galilean moon Europa is made using the available high resolution Voyager imagery, low resolution support imaging, and what understanding of ice structure and mechanical behavior science has that is applicable to the problem. A general discussion of the history of Europa studies and the fundamental global morphology is undertaken. The visible lineament and terrain patterns are described, and possible origins discussed. Observations of faulting and block rotation previously described are amplified. A comparison of Europa's structures to terrestrial sea ice and lava lake crust features is also included. Finally, an attempt is made at synthesizing a unified model for the evolution of Europa's crust is presented which is compared with models developed by others.

Schenk, P. M.↗

..delta..-Learning of High-Fidelity Electronic Structure Using Graph Neural Networks with Modified Node-Level Features

In this work, we present a ..delta..-learning approach for predicting the eigenvalues calculated with the hybrid functional HSE06 (..epsilon..nkHSE) for a set of metal and nitrogen doped graphene catalysts (MNCs) from Perdew-Burke-Ernzerhof (PBE) inputs. The model presented here incorporates electronic scalar features along with structural information in a graph neural network (GNN). In particular, the PBE eigenvalues for different bands and k-points and orbital-resolved projectors are combined with the applied potential as node-level features along with structural information within the Atomistic Line Graph Neural Network (ALIGNN) architecture. These features enable flexibility for systems with electrified interfaces, such as in electrocatalysts and achieves mean absolute error (MAE) of less than 0.1 eV. The machine learning model reported here achieves a strong generalization to left-out adsorbates (MAE = 0.074 eV) and leave-one-chemical-space-out (MAE = 0.08 eV) and completely left-out metals (MAE = 0.072 eV), confirming the robustness of the machine learning (ML) model in predicting ..epsilon..nkHSE.

36 MATERIALS SCIENCE↗

The Vertical Structure of Major Meteorological Features on Jupiter: The Great Red Spot and White Ovals BC and DE

Multi-spectral imagery of Jupiter's Great Red Spot (GRS) and two White ovals acquired by the Galileo/NIMS are used to constrain the spatial variability of the vertical aerosol structure and the distribution of ammonia in and around these most-prominent anti-cyclonic features. All three features exhibit a high-altitude core spanning about 3/4 of their visual size when viewed with moderate absorption wavelengths, indicating a bulk elliptical, "wedding cake" shape in their overall three-dimensional cloud structure. A distinctive spiral pattern within the GRS core is seen in moderate methane and hydrogen absorption bandpasses. This pattern - which has been modelled to show a 2 km variation in cloudtop pressure within the GRS - is inconsistent with a different spiral-shaped pattern observed in ammonia-sensitive wavelengths, thus indicating spatial variability not only in the column abundance of ammonia within the GRS, but in its mixing ratio as well. White Ovals BC and DE were observed in February 1997, just a year before their unusual merger into a single feature. At the time of these observations, the centers of the two anti-cyclones were about 16 degrees apart, separated by a complex cyclonic feature which exhibited unusual spatial variability in its appearance in images acquired at ammonia-sensitive wavelengths. In particular, the northern half of this feature has the largest ammonia column abundance seen within the environs around the white ovals, indicating unusual variability in either cloud structure/altitude and/or ammonia humidity within the cyclone.

Baines, Kevin H.↗