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At least 487 records · Page 27

Trajectory of Growth of Severe Acute Respiratory Syndrome Coronavirus 2 (SARS-CoV-2) Variants in Houston, Texas, January through May 2021, Based on 12,476 Genome Sequences

Certain genetic variants of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) are of substantial concern because they may be more transmissible or detrimentally alter the pandemic course and disease features in individual patients. SARS-CoV-2 genome sequences from 12,476 patients in the Houston Methodist health care system diagnosed from January 1 through May 31, 2021 are reported here. Prevalence of the B.1.1.7 (Alpha) variant increased rapidly and caused 63% to 90% of new cases in the latter half of May. Eleven B.1.1.7 genomes had an E484K replacement in spike protein, a change also identified in other SARS-CoV-2 lineages. Compared with non–B.1.1.7-infected patients, individuals with B.1.1.7 had a significantly lower cycle threshold (a proxy for higher virus load) and significantly higher hospitalization rate. Other variants [eg, B.1.429 and B.1.427 (Epsilon), P.1 (Gamma), P.2 (Zeta), and R.1] also increased rapidly, although the magnitude was less than that in B.1.1.7. Twenty-two patients infected with B.1.617.1 (Kappa) or B.1.617.2 (Delta) variants had a high rate of hospitalization. Breakthrough cases (n = 207) in fully vaccinated patients were caused by a heterogeneous array of virus genotypes, including many not currently designated variants of interest or concern. Finally, in the aggregate, this study delineates the trajectory of SARS-CoV-2 variants circulating in a major metropolitan area, documents B.1.1.7 as the major cause of new cases in Houston, TX, and heralds the arrival of B.1.617 variants in the metroplex.

60 APPLIED LIFE SCIENCES↗

Overview and Applications of UAVSAR's Multi-Squint Polarimetric Imaging Mode

NASA's Jet Propulsion Laboratory has developed a reconfigurable polarimetric L-band synthetic aperture radar (SAR), specifically designed to acquire airborne repeat track interferometric (RTI) SAR data for application to monitoring surface deformation and vegetation structure measurements. The system employs a precision autopilot developed by NASA Dryden that allows the plane to fly precise trajectories usually within a 5 m tube. Also required for robust repeat pass applications is the ability to point the antenna in the same direction on repeat passes to a fraction of an azimuth beamwidth (8? for UAVSAR). This precise pointing is achieved using an electronically scanned antenna whose pointing is based on inertial navigation unit (INU) attitude angle data. The radar design is fully polarimetric with an 80 MHz bandwidth (2 m range resolution) and has a greater than 20 km range swath when flying at its nominal altitude of 12500 m. The ability to electronically steer the beam on a pulse-to-pulse basis has allowed a new mode of SAR data acquisition whereby the radar beam is steered to different squint angles on successive pulses thereby simultaneously generating images at multiple squint angles. This mode offers the possibility of generating vector deformation measurements with a single pair of repeat passes and to obtain greater kz diversity for vegetation studies with a reduced number of passes. This paper will present an overview of the mode, discuss its potential for deformation and vegetation, and show some examples using UAVSAR data.

multisquint↗

X-SAR: The X-band synthetic aperture radar on board the Space Shuttle

The X-band synthetic aperture radar (X-SAR) is the German/Italian contribution to the NASA/JPL Shuttle Radar Lab missions as part of the preparation for the Earth Observation System (EOS) program. The Shuttle Radar Lab is a combination of several radars: an L-band (1.2 GHz) and a C-band (5.3 GHz) multipolarization SAR known as SIR-C (Shuttle Imaging Radar); and an X-band (9.6 GHz) vertically polarized SAR which will be operated synchronously over the same target areas to deliver calibrated multifrequency and multipolarization SAR data at multiple incidence angles from space. A joint German/Italian project office at DARA (German Space Agency) is responsible for the management of the X-SAR project. The space hardware has been developed and manufactured under industrial contract by Dornier and Alenia Spazio. Besides supporting all the technical and scientific tasks, DLR, in cooperation with ASI (Agencia Spaziale Italiano) is responsible for mission operation, calibration, and high precision SAR processing. In addition, DLR developed an airborne X-band SAR to support the experimenters with campaigns to prepare for the missions. The main advantage of adding a shorter wavelength (3 cm) radar to the SIR-C radars is the X-band radar's weaker penetration into vegetation and soil and its high sensitivity to surface roughness and associated phenomena. The performance of each of the three radars is comparable with respect to radiometric and geometric resolution.

Werner, Marian U.↗

Estimation of Canopy Water Content in Konza Parry Grasslands Using Synthetic Aperture Radar Measurements During FIFE

This paper presents the development of an algorithm to retrieve the canopy water contents of natural grasslands and pasture from synthetic aperture radar (SAR) measurements. The development on this algorithm involves three interrelated steps: (1) calibration of SAR data for ground topographic variations, (2) development and validation of backscatter model for cross-polarized ratio. The polarimetric radar data acquired by the Jet Propulsion Laboratory AIRSAR system during the 1989 First International Satellite land Surface Climatology Project (ISLSCP) Field Experiment (FIFE) used for this study. The SAR data have been calibrated and corrected for the topographical effects by using the digital elevation map of the study area.

canopy water contents algorithm Konza Konza Parry ↗

Association between long-term exposure to ambient air pollution and COVID-19 severity: a prospective cohort study

The tremendous global health burden related to COVID-19 means that identifying determinants of COVID-19 severity is important for prevention and intervention. We aimed to explore long-term exposure to ambient air pollution as a potential contributor to COVID-19 severity, given its known impact on the respiratory system. Methods: We used a cohort of all people with confirmed SARS-CoV-2 infection, aged 20 years and older and not residing in a long-term care facility in Ontario, Canada, during 2020. We evaluated the association between long-term exposure to fine particulate matter (PM 2.5 ), nitrogen dioxide (NO 2 ) and ground-level ozone (O 3 ), and risk of COVID-19-related hospital admission, intensive care unit (ICU) admission and death. We ascertained individuals’ longterm exposures to each air pollutant based on their residence from 2015 to 2019. We used logistic regression and adjusted for confounders and selection bias using various individual and contextual covariates obtained through data linkage. Results: Among the 151105 people with confirmed SARS-CoV-2 infection in Ontario in 2020, we observed 8630 hospital admissions, 1912 ICU admissions and 2137 deaths related to COVID-19. For each interquartile range increase in exposure to PM 2.5 (1.70 µg/m 3 ), we estimated odds ratios of 1.06 (95% confidence interval [CI] 1.01–1.12), 1.09 (95% CI 0.98–1.21) and 1.00 (95% CI 0.90–1.11) for hospital admission, ICU admission and death, respectively. Estimates were smaller for NO 2 . We also estimated odds ratios of 1.15 (95% CI 1.06–1.23), 1.30 (95% CI 1.12–1.50) and 1.18 (95% CI 1.02–1.36) per interquartile range increase of 5.14 ppb in O 3 for hospital admission, ICU admission and death, respectively.

60 APPLIED LIFE SCIENCES↗

Seasat SAR identification of dry climate urban land cover

Digitally processed Seasat synthetic aperture radar (SAR) imagery of the Denver, Colorado area was examined to assess its potential for mapping urban land cover and the compatibility of SAR derived classes with those described in the U.S. Geological Survey classification system. The entire scene was interpreted to generate a small-scale land cover map. In addition, six subscene enlargements representative of urban land cover categories extant in the area were used as test sites for detailed analysis of land cover types. Two distinct approaches were employed and compared in examining the imagery - a visual interpretation of black-and-white positive transparencies and an automated-machine/visual interpretation. The latter used the Image 100 interactive image analysis system to generate land cover classes by density level slicing of the image frequency histogram.

Henderson, F. M.↗

Geologic remote sensing - New technology, new information

Results of geologic studies using data collected by the NASA/JPL Thermal Infrared Imaging Spectrometer (TIMS), Airborne Visible/Infrared Imaging Spectrometer (AVIRIS), and the Airborne Synthetic Aperture Radar (AIRSAR) are discussed. These instruments represent prototypes for the Earth Observing System (EOS) satellite instruments ASTER, High Resolution Imaging Spectrometer (HIRIS), and EOS SAR. Integrated analysis of this data type is one of the keys to successful geologic research using EOS. TIMS links the physical properties of surface materials in the 8-12-*mm region to their composition. Calibrated aircraft data make direct lithological mapping possible. AVIRIS, an analog for HIRIS, provides quantitative information about the surface composition of materials based on their detailed visible and infrared spectral signatures (0.4-2.45 mm). Calibrated AVIRIS data make direct identification of minerals possible. The AIRSAR provides additional complementary information about the surface morphology of rocks and soils.

Kruse, F. A.↗

The 1994 International Geoscience and Remote Sensing Symposium (IGARSS 1994)

The papers presented at the symposium focus on remote sensing, particularly on global monitoring of the earth with emphasis on the solution of environmental problems. Topics discussed include remote sensing of clouds and earth troposphere, sea ice remote sensing, optical remote sensing, land monitoring and thermal sensing, atmospheric sounding and monitoring, atmospheric correction, and satellite imaging data. Other subject areas are ecosystems and vegetation monitoring; ocean winds and surface scattering; ocean waves, currents and bathymetry; satellite oceanography; SAR for remote sensing; neural nets application to remote sensing; geographical information systems; and electromagnetic wave propagation. Also discussed environmental monitoring using ERS-1; Topex/Poseidon results; spaceborne instruments; image processing and classification algorithms; and future space missions.

Source record↗

Observations of polar ice using enhanced resolution microwave scatterometer data

Increasing interest in the role of ice sheets in regulating global climate has created a need for synoptic interannual recording and monitoring of the earth's major ice sheets. Based on their ability to 'see' into ice, microwave remote sensing instruments are well-suited for monitoring the polar regions. Although microwave radar has increased capabilities over some aspects of visible wavelength systems, there are tradeoffs between spatial and temporal resolution. Synthetic aperture radar (SAR) can make high resolution images, but is limited in ground coverage over polar regions because of high data rates and a lack of receiving stations. Microwave scatterometers, originally designed for measuring winds over the ocean, are capable of greater ground coverage in polar regions, but are inherently low resolution instruments. However, a recently developed resolution enhancement technique can generate enhanced resolution scatterometer images. In this paper the algorithm is applied to create enhanced resolution images from Seasat and ERS-1 scatterometer data over. Time series of medium-scale radar images for Greenland and Antarctica and the surrounding seas are presented. The growth and shrinkage of the southern polar sea-ice throughout a full annual cycle is illustrated with the seasonal cycle of patterns on the Antarctic and Greenland Ice Sheets clearly evident. Using the time series and simple scattering models, the locations of key ice facies in Greenland are determined.

Long, David G.↗

High-efficiency L-band T/R Module: Development Results

Future interferometric synthetic aperture radar (InSAR) systems require electronically scanned phased-array antennas, where the transmit/receive (T/R) module is a key component. The T/R module efficiency is a critical figure of merit and has direct implications on the power dissipation and power generation requirements of the system. Significant improvements in the efficiency of the T/R module will make SAR missions more feasible and affordable. The results of two high-efficiency T/R modules are presented, each based on different power amplifier technologies. One module uses a 30W GaAs Class-AlB power amplifier and the second module uses a 70W LD-MOS Class-ElF power amplifier, where both modules use a common low power section. Each module operates over an 80MHz bandwidth at L-band (1.2GHz) with an overall module efficiency greater than 58%. We will present the results of these two T/R modules that have been designed, built and tested.

synthetic aperture radar↗

DESDynI Quad First Stage Processor - A Four Channel Digitizer and Digital Beam Forming Processor

The proposed Deformation, Eco-Systems, and Dynamics of Ice Radar (DESDynI-R) L-band SAR instrument employs multiple digital channels to optimize resolution while keeping a large swath on a single pass. High-speed digitization with very fine synchronization and digital beam forming are necessary in order to facilitate this new technique. The Quad First Stage Processor (qFSP) was developed to achieve both the processing performance as well as the digitizing fidelity in order to accomplish this sweeping SAR technique. The qFSP utilizes high precision and high-speed analog to digital converters (ADCs), each with a finely adjustable clock distribution network to digitize the channels at the fidelity necessary to allow for digital beam forming. The Xilinx produced FX130T Virtex 5 part handles the processing to digitally calibrate each channel as well as filter and beam form the receive signals. Demonstrating the digital processing required for digital beam forming and digital calibration is instrumental to the viability of the proposed DESDynI instrument. The qFSP development brings this implementation to Technology Readiness Level (TRL) 6. This paper will detail the design and development of the prototype qFSP as well as the preliminary results from hardware tests.

Chuang, Chung-Lun↗

Enhancement of Tropical Land Cover Mapping with Wavelet-Based Fusion and Unsupervised Clustering of SAR and Landsat Image Data

The characterization and the mapping of land cover/land use of forest areas, such as the Central African rainforest, is a very complex task. This complexity is mainly due to the extent of such areas and, as a consequence, to the lack of full and continuous cloud-free coverage of those large regions by one single remote sensing instrument, In order to provide improved vegetation maps of Central Africa and to develop forest monitoring techniques for applications at the local and regional scales, we propose to utilize multi-sensor remote sensing observations coupled with in-situ data. Fusion and clustering of multi-sensor data are the first steps towards the development of such a forest monitoring system. In this paper, we will describe some preliminary experiments involving the fusion of SAR and Landsat image data of the Lope Reserve in Gabon. Similarly to previous fusion studies, our fusion method is wavelet-based. The fusion provides a new image data set which contains more detailed texture features and preserves the large homogeneous regions that are observed by the Thematic Mapper sensor. The fusion step is followed by unsupervised clustering and provides a vegetation map of the area.

LeMoigne, Jacqueline↗

An adaptive quantization method for burst mode synthetic aperture radar data

Synthetic aperture radar (SAR) has high data rate because it collects and processes the data coherently. The data rate limitation of the system has to be satisfied while maintaining good image quality. Thus, a quantizer with minimum data rate and high SNR should be employed. An adaptive quantization method is proposed for the burst mode SAR. This adaptive quantizer uses uniformly quantized data to select a subset of bits which is equivalent to changing the step size of the uniform quantizer. A simple implementation which uses the previous burst data to compute the local statistics for the bit selection is presented. The use of previous burst simplifies the implementation because it does not require storage or delay; however, an abrupt change in the terrain could result in incorrect bit selection. An error analysis of this implementation and comparison of two burst mode SAR images formed using the uniformly quantized and adaptively quantized data is presented.

Joo, T. H.↗

Mechanisms of SARS-CoV-2 neutralization by shark variable new antigen receptors elucidated through X-ray crystallography

Single-domain Variable New Antigen Receptors (VNARs) from the immune system of sharks are the smallest naturally occurring binding domains found in nature. Possessing flexible paratopes that can recognize protein motifs inaccessible to classical antibodies, VNARs have yet to be exploited for the development of SARS-CoV-2 therapeutics. Here, we detail the identification of a series of VNARs from a VNAR phage display library screened against the SARS-CoV-2 receptor binding domain (RBD). The ability of the VNARs to neutralize pseudotype and authentic live SARS-CoV-2 virus rivalled or exceeded that of full-length immunoglobulins and other single-domain antibodies. Crystallographic analysis of two VNARs found that they recognized separate epitopes on the RBD and had distinctly different mechanisms of virus neutralization unique to VNARs. Structural and biochemical data suggest that VNARs would be effective therapeutic agents against emerging SARS-CoV-2 mutants, including the Delta variant, and coronaviruses across multiple phylogenetic lineages. This study highlights the utility of VNARs as effective therapeutics against coronaviruses and may serve as a critical milestone for nearing a paradigm shift of the greater biologic landscape.

60 APPLIED LIFE SCIENCES↗

Global mapping strategies for a synthetic aperture radar system in orbit about Venus

An analysis of the global mapping of Venus using a synthetic aperture radar (SAR) is presented. The geometry of the side-looking radar, the narrow swath width, and the slow rotation of Venus combine to constrain the methods required to produce such a map within the primary mapping mission of 121.5 days. Parametric studies indicate that multiple strategies can satisfy the requirements of the mission with reasonable assumptions for the total recording capacity, the downlink data rate, and the operating time of the SAR on each revolution.

Kerridge, S. J.↗

Spaceborne distributed SAR antenna

The MSAR c-band array panel was developed and tested. Each element of the antenna system is discussed individually as well as collectively. Textual descriptions together with test data are both used to enable a clear understanding of the antenna system performance. In general, test data has confirmed or exceeded expectations. Of particular note is the excellent cross polarization achieved with a field cancelling geometry.

Mckenna, D. B.↗

Necessity to adapt land use and land cover classification systems to readily accept radar data

A hierarchial, four level, standardized system for classifying land use/land cover primarily from remote-sensor data (USGS system) is described. The USGS system was developed for nonmicrowave imaging sensors such as camera systems and line scanners. The USGS system is not compatible with the land use/land cover classifications at different levels that can be made from radar imagery, and particularly from synthetic-aperture radar (SAR) imagery. The use of radar imagery for classifying land use/land cover at different levels is discussed, and a possible revision of the USGS system to more readily accept land use/land cover classifications from radar imagery is proposed.

Drake, B.↗