Recovery of the mean Jovian temperature structure from inversion of spectrally resolved thermal radiance data
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Orton, G. S.↗
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Preliminary Data on the Effect of Body-nose Bluntness on the Drag and Pressure Recovery of a Side-inlet-body Combination at Mach Numbers of 1.4 and 1.7
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Stroud, John F↗
Advantages and Limits of Metagenomic Assembly and Binning of a Giant Virus
ABSTRACT Giant viruses have large genomes, often within the size range of cellular organisms. This distinguishes them from most other viruses and demands additional effort for the successful recovery of their genomes from environmental sequence data. Here, we tested the performance of genome-resolved metagenomics on a recently isolated giant virus, Fadolivirus, by spiking it into an environmental sample from which two other giant viruses were isolated. At high spike-in levels, metagenome assembly and binning led to the successful genomic recovery of Fadolivirus from the sample. A complementary survey of the major capsid protein indicated the presence of other giant viruses in the sample matrix but did not detect the two isolated from this sample. Our results indicate that genome-resolved metagenomics is a valid approach for the recovery of near-complete giant virus genomes given that sufficient clonal particles are present. However, our data also underline that a vast majority of giant viruses remain currently undetected, even in an era of terabase-scale metagenomics. IMPORTANCE The discovery of large and giant nucleocytoplasmic large DNA viruses (NCLDV) with genomes in the megabase range and equipped with a wide variety of features typically associated with cellular organisms was one of the most unexpected, intriguing, and spectacular breakthroughs in virology. Recent studies suggest that these viruses are highly abundant in the oceans, freshwater, and soil, impact the biology and ecology of their eukaryotic hosts, and ultimately affect global nutrient cycles. Genome-resolved metagenomics is becoming an increasingly popular tool to assess the diversity and coding potential of giant viruses, but this approach is currently lacking validation.
59 BASIC BIOLOGICAL SCIENCES↗
Internet Data Delivery for Future Space Missions
Ongoing work at National Aeronautics and Space Administration Goddard Space Flight Center (NASA/GSFC), seeks to apply standard Internet applications and protocols to meet the technology challenge of future satellite missions. Internet protocols and technologies are under study as a future means to provide seamless dynamic communication among heterogeneous instruments, spacecraft, ground stations, constellations of spacecraft, and science investigators. The primary objective is to design and demonstrate in the laboratory the automated end-to-end transport of files in a simulated dynamic space environment using off-the-shelf, low-cost, commodity-level standard applications and protocols. The demonstrated functions and capabilities will become increasingly significant in the years to come as both earth and space science missions fly more sensors and as the need increases for more network-oriented mission operations. Another element of increasing significance will be the increased cost effectiveness of designing, building, integrating, and operating instruments and spacecraft that will come to the fore as more missions take up the approach of using commodity-level standard communications technologies. This paper describes how an IP (Internet Protocol)-based communication architecture can support all existing operations concepts and how it will enable some new and complex communication and science concepts. The authors identify specific end-to-end data flows from the instruments to the control centers and scientists, and then describe how each data flow can be supported using standard Internet protocols and applications. The scenarios include normal data downlink and command uplink as well as recovery scenarios for both onboard and ground failures. The scenarios are based on an Earth orbiting spacecraft with downlink data rates from 300 Kbps to 4 Mbps. Included examples are based on designs currently being investigated for potential use by the Global Precipitation Measurement (GPM) mission.
Rash, James↗
Internet Technology for Future Space Missions
Ongoing work at National Aeronautics and Space Administration Goddard Space Flight Center (NASA/GSFC), seeks to apply standard Internet applications and protocols to meet the technology challenge of future satellite missions. Internet protocols and technologies are under study as a future means to provide seamless dynamic communication among heterogeneous instruments, spacecraft, ground stations, constellations of spacecraft, and science investigators. The primary objective is to design and demonstrate in the laboratory the automated end-to-end transport of files in a simulated dynamic space environment using off-the-shelf, low-cost, commodity-level standard applications and protocols. The demonstrated functions and capabilities will become increasingly significant in the years to come as both earth and space science missions fly more sensors and the present labor-intensive, mission-specific techniques for processing and routing data become prohibitively. This paper describes how an IP-based communication architecture can support all existing operations concepts and how it will enable some new and complex communication and science concepts. The authors identify specific end-to-end data flows from the instruments to the control centers and scientists, and then describe how each data flow can be supported using standard Internet protocols and applications. The scenarios include normal data downlink and command uplink as well as recovery scenarios for both onboard and ground failures. The scenarios are based on an Earth orbiting spacecraft with downlink data rates from 300 Kbps to 4 Mbps. Included examples are based on designs currently being investigated for potential use by the Global Precipitation Measurement (GPM) mission.
Hennessy, Joseph F.↗
Equatorial thermospheric measurements of temperatures and winds at Arequipa, Peru
Enhancement of FPI temperatures above quiet levels was observed a few hours after the start of magnetic activity. Magnitude of this enhancement is about 300 degrees. This is followed by relaxation to prestorm levels. Apparent average offset of RPI temperatures from mass spectrometer incoherent scatter radar by 100 to 200 degrees for relatively quiet times is also observed. There was a definite suggestion of a midnight thermal enhancement for April and August data, with a magnitude of about 100 degrees, seen in both 1983 and 1984 observations. There was a definite enhancement of 6300A surface brightness in the south as compared with other directions, probably connected to the tropical airglow arcs. Meridional winds were small (less than 25 m/s) throughout night. Indication of northward migration of the observed 6300A enhancement in the evening hours as observations approach local winter solstice. This is probably related to the observed poleward (to the south) meridional wind (of magnitude 50 m/s) in this period. Zonal component of winds always eastward, but speed approaches zero sooner near equinox than at summer solstice. Typical magnitude at peak is of order 100 to 150 m/s. Suggestion of zonal wind increase after twilight and recovery of 6300A emission for April data. Origin not clear but may be related to midnight thermal enhancement. Meridional wind virtually zero for equinox in 1983; shows evening flow towards winter hemisphere in early evening for solstice data. Suggestion of post-midnight surge in April 1984 data. No major effects associated with magnetic storm activity, but a suggestion of decrease in zonal component below nominal levels.
Meriwether, J. W., Jr.↗
Efficient 3-D velocity model building using joint inline and crossline plane-wave wave-equation migration velocity analyses
SUMMARY Wave-equation migration velocity analysis (WEMVA) is an image-domain inversion method for velocity model building. Automatic plane-wave WEMVA (PWEMVA) calculates the moveouts of plane-wave common-image gathers (CIGs) by searching a best-fitting parabola with semblance analysis and backprojects residual CIG moveouts into wavefield wave paths with a reflection tomographic kernel. However, 3-D PWEMVA is very computationally expensive because 3-D reflection tomographic inversion requires at least five 3-D reverse-time migrations per iteration and stores two types of source wavefields at model boundaries. We develop a joint inline and crossline PWEMVA method for efficient 3-D velocity model building. We alternatively implement the inline and crossline PWEMVAs with a constraint for each other, in which we iteratively construct the 3-D velocity model update through 1-D spline interpolation of 2-D gradients. The inline and crossline joint inversion is practical since PWEMVA only inverts for low-wavenumber velocity perturbations along wave paths, and the method can take less than 1 per cent of the computational cost of full 3-D PWEMVA. To construct unaliased plane waves for our joint inline and crossline PWEMVA, we develop a 3-D data interpolation method in the frequency–wavenumber (FK) domain to recover regularly and randomly missing traces. The method minimizes the misfit on sufficiently localized data subsets with iterative optimal step lengths and a gradient preconditioner that iteratively selects dominant dips along different azimuths. In numerical experiments, we use a 3-D synthetic seismic data set and a land 3-D field seismic data set acquired at the Farnsworth CO2-EOR (enhanced oil recovery) field to demonstrate the efficacy of our velocity model building and data interpolation methods.
Liu, Xuejian↗
Heat Transfer from Cylinders in Transition From Slip Flow to Free-Molecule Flow
Over 600 measured heat-transfer coefficients in the transition from slip to free-molecule flow have been correlated by using the Nusselt number Nu as a function of the Knudsen Kn and Reynolds Re (or Mach M) numbers. The experimental range for these heat-transfer data from transverse cylinders in air corresponds to the following dimensionless groups: M, 0.10 to 0.90; Re, 0.03 to 11.5; Kn, 0.10 to 5.0. The total air temperature T(sub t) was maintained constant at 80 F, but wire temperature was Varied from 150 to 580 F. At Kn=0.10, Nu extrapolates smoothly into slip-flow empirical curves that show Nu as a function of Re and M or Kn. The correlation gradually changes from the square root of Re(sub t) dependence characteristic of continuum flow to first-power Re dependence as Kn increases (decreasing Re). At the experimental limit Kn ft 5.0, the Nu data correlate with a mean fractional error of 413 percent by the prediction of free-molecule-flow theory. In comparing experimental results with theory, an accommodation coefficient of 0.57+/-0.07 was inferred from the heat-transfer data, which were obtained with etched tungsten wire in air. The wire recovery temperature T(sub e) was measured and compared with existing data and theory in terms of a ratio eta(equivalent to T(sub e)/T(sub t). The results can be divided into three groups by Kn criteria: For Kn less than 2.01, eta is independent of Kn, and eta decreases from 1.0 to 0.97 as M increases from 0 to 0.90; for 2.0 less than Kn less than 5.0, eta is a function of both Kn and M in this transition region to fully developed free-molecule flow; and for Kn greater than 5.0, eta predicted by free-molecule-flow theory is observed and increases from 1.0 to 1.08 as M increases from 0 to 0.90, again independent of Kn. Therefore, these T(sub e) data provide a guide to the boundary of fully developed free-molecule flow, which is.inferred from this research to exist for Kn greater than 5.0. This boundary criterion is substantiated by other published data on T(sub e) at supersonic speeds.
Cybulski, Ronald J.↗
Logic design for dynamic and interactive recovery.
Recovery in a fault-tolerant computer means the continuation of system operation with data integrity after an error occurs. This paper delineates two parallel concepts embodied in the hardware and software functions required for recovery; detection, diagnosis, and reconfiguration for hardware, data integrity, checkpointing, and restart for the software. The hardware relies on the recovery variable set, checking circuits, and diagnostics, and the software relies on the recovery information set, audit, and reconstruct routines, to characterize the system state and assist in recovery when required. Of particular utility is a handware unit, the recovery control unit, which serves as an interface between error detection and software recovery programs in the supervisor and provides dynamic interactive recovery.
Carter, W. C.↗
Impact of Intake and Exhaust Ducts on the Recovery Efficiency of Heat Recovery Ventilation Systems
The heat recovery efficiency of ventilation systems utilizing heat recovery ventilators (HRVs) depends not only on the heat recovery efficiency of the HRV units themselves but also on the intake and exhaust ducts that connect the HRV units to the outside environment. However, these ducts are often neglected in heat loss calculations, as their impact on the overall heat recovery efficiency of HRV systems is often not understood and, to the knowledge of the authors, a mathematical model for the overall heat recovery efficiency of HRV systems that accounts for these ducts has not been published. In this research, a mathematical model for the overall heat recovery efficiency of HRV systems that accounts for the intake and exhaust ducts was derived and validated using real-life data. The model-predicted decrease in heat recovery efficiency due to the ducts was in reasonable agreement (relative error within 20%) with the real-life measurements. The results suggest that utilizing this model allows for more correct ventilation heat loss calculations compared to using the heat recovery efficiency of the HRV unit alone, but more field studies are needed to verify the accuracy of this model in a wide range of applications.
32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗
A sun-aligned arc observed by DMSP and AE-C
On May 12, 1977, 8 minutes after a DMSP satellite photographed a sun-aligned auroral arc in the southern polar cap, AE-C crossed over the same arc. Precipitating electrons were observed with a peak energy flux of 0.94 erg per sq cm s but with no clear monoenergetic beam, and coincident ion precipitation was measured at energies of a few keV. A very sharp ion convection reversal was found coincident with the particle precipitation and embedded in a region of constant antisunward flow. Magnetic field data indicate that the arc occurred during the recovery phase of a weak magnetic storm, with the IMF in a toward sector and the Z component nearly zero. The data are consistent with a source of particles at altitudes of the order of 5-8 R(E) on field lines containing the plasma sheet boundary layer. The electron spectra do not indicate the existence of an electrostatic potential along the magnetic field lines projecting from the arc. The electrodynamic properties associated with the arc appear to be consistent with a simple model in which field-aligned currents are required along any boundary where the horizontal ionospheric current diverges.
Hoffman, R. A.↗
Operator-theoretic Resilience Calculations (ORC)
This project developed operational metrics to characterize the resilience of a dynamic network in real-time from time-series data by proposing: a) Resilience ratio b) Recovery energy. Resilience analysis considers the controllability and observability and provides a real-time under- standing on resilience without creating/simulating them. The report focuses on the application of resilience metrics on the HYPERSIM data and insights obtained.
97 MATHEMATICS AND COMPUTING↗
C-band station coordinate determination for the Geos-C altimeter calibration area
Dynamical orbital techniques were employed to estimate the center-of-mass station coordinates of six C-band radars located in the designated primary Geos-C radar altimeter calibration area. This work was performed in support of the planned Geos-C mission (December 1974 launch). The sites included Bermuda, Grand Turk, Antigua, Wallops Island (Virginia), and Merritt Island (Florida). Two sites were estimated independently at Wallops Island yielding better than 40 cm relative height recovery, with better than 10 cm and 1m (relative) recovery for phi and lambda, respectively. The tracking data used in this analysis were taken during 1969 when the radars tracked the Geos-II transponder. In all, over 120 passes of data were used. Range biases were estimated. Error analysis and comparisons with other investigators indicate that better than 2m (1 sigma) relative recovery has been achieved at all sites.
Klosko, S. M.↗
Topological network analysis of patient similarity for precision management of acute blood pressure in spinal cord injury
Background: Predicting neurological recovery after spinal cord injury (SCI) is challenging. Using topological data analysis, we have previously shown that mean arterial pressure (MAP) during SCI surgery predicts long-term functional recovery in rodent models, motivating the present multicenter study in patients. Methods: Intra-operative monitoring records and neurological outcome data were extracted (n = 118 patients). We built a similarity network of patients from a low-dimensional space embedded using a non-linear algorithm, Isomap, and ensured topological extraction using persistent homology metrics. Confirmatory analysis was conducted through regression methods. Results: Network analysis suggested that time outside of an optimum MAP range (hypotension or hypertension) during surgery was associated with lower likelihood of neurological recovery at hospital discharge. Logistic and LASSO (least absolute shrinkage and selection operator) regression confirmed these findings, revealing an optimal MAP range of 76–[104-117] mmHg associated with neurological recovery. Conclusions: We show that deviation from this optimal MAP range during SCI surgery predicts lower probability of neurological recovery and suggest new targets for therapeutic intervention. Funding: NIH/NINDS: R01NS088475 (ARF); R01NS122888 (ARF); UH3NS106899 (ARF); Department of Veterans Affairs: 1I01RX002245 (ARF), I01RX002787 (ARF); Wings for Life Foundation (ATE, ARF); Craig H. Neilsen Foundation (ARF); and DOD: SC150198 (MSB); SC190233 (MSB); DOE: DE-AC02-05CH11231 (DM).
59 BASIC BIOLOGICAL SCIENCES↗
Data from: Lowland Tropical Forests Remain a Methane Sink Under Warming and Long-Term Hurricane Disturbance Recovery
The repository folder contains spreadsheets and script for soil greenhouse gas (GHG) fluxes, soil moisture, soil temperature, air temperature, and precipitation measurements collected from the Tropical Responses to Altered Climate Experiment (TRACE) at the Sabana Research Field Station, El Yunque National Forest (USDA Forest Service; 18°19′28.74″ N, 65°43′50.09″ W) — an open-air field warming experiment located in a lowland tropical forest in Puerto Rico within the Luquillo Experimental Forest (LEF) — six to seven years after Hurricanes Irma and Maria (2017). All spreadsheets for soil and air microclimate data, as well as soil greenhouse gas data, are included as csv files. Air temperature data are also included as Excel spreadsheets (.xlsx). The script is built in R Studio, which is the only software required to run data analysis. This dataset is associated with the manuscript “Larocca Conte G ; Zuvela L ; Cruz-Pérez R ; Barreto-Vélez T ; Becerra-Santillan N ; Campbell S ; Chu H ; Dam T ; Grullón-Penkova I ; Kleit M ; Ortiz-Iglesias D ; Rubio-Lebrón L ; Cavaleri M ; Reed S ; Sihi D ; Wood T ; O'Connell C., 2026. Lowland Tropical Forests Remain a Methane Sink Under Warming and Long-Term Hurricane Disturbance Recovery. Agricultural and Forest Meteorology. In review". The dataset was used to test the effect of warming on soil CH4 dynamics following long-term legacy effects of hurricane disturbance. The dataset includes: - An overall README file in word and pdf format describing methodology and spreadsheets’ structure. - Continuous measurements of soil temperature and moisture from January 2023 to July 2024 measured with Campbell CS655 probes (“TRACE_soil_temperature_and_moisture_2023_cleaned(in).csv” and “TRACE_soil_temperature_and_moisture_2024_cleaned. csv”). - Air temperature data measured with a HOBO MX23O1A data logger (“Hobo air temperature 2023 Sep 2024” and “Hobo air temperature 2023 Sep 2024” – “CSV FILES folders”). - Precipitation data from a nearby weather tower downloaded from González et al. (2025; “sabana_2020-2025.csv”). - Soil CH4 and CO2 effluxes measured intermittently in two summer campaigns (June – August 2023 and June – July 2024) with a LI-COR 8200-01S Portable Smart Chamber coupled with a LI-COR LI-7810 CH4/ CO2/H2O Trace Gas Analyzer (“23_24COMBO2.0.csv”). - R markdown script for data analysis (“Trace new_PLOTS.Rmd”).
54 ENVIRONMENTAL SCIENCES↗
An Efficient Approach to Collect Inlet Characterization Data
This report considers a novel process to acquire performance data for supersonic mixed compression inlets that is faster, and therefore less costly, than the previous one. In the previous process, measurements were recorded in discrete increments. The backpressuring actuator was advanced, there was a pause to allow for airflow fluctuations to diminish, and then the measurements were recorded. While this process was methodical, reliable and accurate, it consumed significant wind-on time. In general, high-speed wind tunnels are expensive to operate considering maintenance, energy and human resource requirements. Furthermore, many facilities, such as blowdown wind tunnels, are limited in the duration that they can maintain the desired test condition. Consequently, a quick method to collect the measurements is desired. A favored approach has the actuator moving in a continuous fashion with measurements recorded as the actuator continuously progresses through the increment points. This approach, identified as the dynamic inlet characteristic data acquisition procedure, uses in situ dynamic high-speed pressure sensors to measure pressure signals. While faster, continuous movement adds dynamic effects to the data. To better understand these dynamic effects and other potential influences, a study was undertaken to compare wind tunnel measurements taken at discrete actuator position points with data gathered during continuous actuator movement. Specially, plots of inlet pressure recovery versus mass capture ratio, or total pressure characteristic curves, were examined. The data were measured during experiments in the NASA Glenn Research Center Abe Silverstein 10- by 10-Foot Supersonic Wind Tunnel (SWT) with an inlet propulsion test article. In this report, the wind tunnel experiment and the study objectives are described. The processes to reduce the data and for analysis are explained. A discussion of the results along with features noted in the data is given. Finally, conclusions from this study that may be used to guide future wind tunnel experiment planning are presented.
Inlet↗
An Efficient Approach to Collect Inlet Characterization Data
This report considers a novel process to acquire performance data for supersonic mixed compression inlets that is faster, and therefore less costly, than the previous one. In the previous process, measurements were recorded in discrete increments. The backpressuring actuator was advanced, there was a pause to allow for airflow fluctuations to diminish, and then the measurements were recorded. While this process was methodical, reliable and accurate, it consumed significant wind-on time. In general, high-speed wind tunnels are expensive to operate considering maintenance, energy and human resource requirements. Furthermore, many facilities, such as blowdown wind tunnels, are limited in the duration that they can maintain the desired test condition. Consequently, a quick method to collect the measurements is desired. A favored approach has the actuator moving in a continuous fashion with measurements recorded as the actuator continuously progresses through the increment points. This approach, identified as the dynamic inlet characteristic data acquisition procedure, uses in situ dynamic high-speed pressure sensors to measure pressure signals. While faster, continuous movement adds dynamic effects to the data. To better understand these dynamic effects and other potential influences, a study was undertaken to compare wind tunnel measurements taken at discrete actuator position points with data gathered during continuous actuator movement. Specially, plots of inlet pressure recovery versus mass capture ratio, or total pressure characteristic curves, were examined. The data were measured during experiments in the NASA Glenn Research Center Abe Silverstein 10- by 10-Foot Supersonic Wind Tunnel (SWT) with an inlet propulsion test article. In this report, the wind tunnel experiment and the study objectives are described. The processes to reduce the data and for analysis are explained. A discussion of the results along with features noted in the data is given. Finally, conclusions from this study that may be used to guide future wind tunnel experiment planning are presented.
Data Acquisition↗
Challenges and Opportunities in State‐of‐the‐Art Proteomics Analysis for Biomarker Development From Plasma Extracellular Vesicles
Extracellular vesicles (EVs) are membrane-bound particles secreted by cells, playing crucial roles in intercellular communication. The composition of EVs can undergo changes in response to stress and disease conditions, making them excellent biomarker candidates. However, extracting protein information from EVs can be challenging due to their low abundance in complex biofluids and copurification with contaminant proteins and particles. Techniques to enrich EVs have their strengths and limitations, without one being able to purify EVs to complete homogeneity. This can lead to compromised recovery rates and increased complexity, making data interpretation difficult. In this viewpoint article, we explore the concept that better characterization of EV composition, followed by quantification of EV proteins in complex samples, might be a more viable route for biomarker development. Mass spectrometers can provide reproducible deep coverage of the EV proteome, despite sample impurities. This paradigm shift presents opportunities to integrate advanced bioinformatics tools to refine the EV proteome landscape, identify novel biomarkers, and streamline validation processes in biomarker development. By focusing on leveraging technology rather than achieving absolute purity, this approach can transform current practices and open opportunities for robust biomarker discovery. Herein, we highlight not only such opportunities but also challenges to implement this concept.
Dakup, Panshak P. [Pacific Northwest National Labo↗