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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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Research software engineering: Professionalization, roles, and identity

This report summarizes the results of a study of research software professionals based on 17 interviews conducted at U.S. national laboratories and academic institutions. The study focuses on understanding the emerging professional role of research software engineer (RSE) and examining how the history of software engineering might be relevant to the emergence of research software engineering as a professional movement. The report first uses interview data to identify several models of professional identity for research software professionals. These include dominance models in which a person strongly identifies with a single professional identity (such as RSE), and multiplicity models in which an individual sees an identity like RSE as just one facet of their overall professional role. Next, it identifies three types of work situations for software professionals at national laboratories, covering those who work in dedicated RSE organizations, those who play an integral role in large multiphysics code projects, and those who work in a more isolated capacity to provide software development support for less computationally intensive research projects. It then reviews some key ideas from the sociology of professions in the context of the software engineering profession, suggesting parallels between the current RSE professional movement and aspects of the history of software engineering. It concludes by suggesting some potential practical implications of these findings for the RSE movement and professional organizations.

97 MATHEMATICS AND COMPUTING↗

Long Term Dynamic Stream Nitrate and Phosphate Changes Following Watershed Wildfires

During and following the 1988 Yellowstone National Park wildfires, airborne remotely sensed data were collected in order to characterize various vegetative components, fire front movements and bum intensities. ER-2 derived Thematic Mapper Simulator (TMS) data were used in conjunction with water sampling and chemistry analysis to determine fire intensities in various watersheds and aquatic system condition changes. The airborne Daedalus multispectral TMS data allowed the characterization of various bum intensities in watersheds. Stream sampling was then conducted in those various burned watersheds to determine nitrate and phosphate concentration changes. Six stream watersheds were monitored for five years (1989-1993) during non-snow periods (May/June through September): Cache Creek (intensely burned), Blacktail Deer Creek (intensely burned), Snake River (moderately burned), Lamar River (mixed burning), Soda Butte Creek (lightly burned), and Amphitheatre Creek (unburned). One litre samples were collected from those streams with ISCO water samplers every 12 hours. The samples were removed every 14 days .(28 Samples), and water chemistry analysis was performed. Chemistry analysis indicated that nitrate and phosphate concentrations were elevated in moderately burned watersheds and significantly elevated in severely burned watersheds. The results during the five year study indicate that bum intensities regulate stream water nitrate and phosphate concentrations, and that remotely sensed data can be used effectively to predict watershed chemical changes which will affect aquatic conditions.

Ambrosia, Vincent G.↗

Extending the Brick schema to represent metadata of occupants

Here, energy-related behaviors of occupants constitute a key factor influencing building performance; accordingly, the measured occupant data can support the objective assessment of the indoor environment and energy performance of buildings, which can inform building design and operational decisions. Existing data schemas focus on metadata of sensors, meters, physical equipment, and IoT devices in buildings; however, they are limited in representing the metadata of occupant data, including occupants' presence in spaces, movement between spaces, interactions with building systems or IoT devices, and preference of indoor environmental needs. To address this gap, an extension to the widely adopted metadata schema, Brick, is proposed to represent the contextual, behavioral, and demographic information of occupants. The proposed extension includes four parts: (1) a new “Occupant” class to represent occupants' demography and energy related behavioral patterns, (2) new subclasses under the Equipment class to represent envelope system and personal thermal comfort devices, (3) new subclasses under the Point class to represent occupant sensing and status, and (4) new auxiliary properties for occupant interactable equipment to represent the level of controllability for each piece of equipment by occupants. The extension is implemented in the Brick schema and has been tested using multiple occupant datasets from the ASHRAE Global Occupant Database. The extension enables Brick schema to capture diverse types of occupant sensing data and their metadata for FAIR data research and applications.

32 ENERGY CONSERVATION, CONSUMPTION, AND UTILIZATI↗

Effects of scale of movement, detection probability, and true population density on common methods of estimating population density

Knowledge of population density is necessary for effective management and conservation of wildlife, yet rarely are estimators compared in their robustness to effects of ecological and observational processes, which can greatly influence accuracy and precision of density estimates. For this study, we simulate biological and observational processes using empirical data to assess effects of animal scale of movement, true population density, and probability of detection on common density estimators. We also apply common data collection and analytical techniques in the field and evaluate their ability to estimate density of a globally widespread species. We find that animal scale of movement had the greatest impact on accuracy of estimators, although all estimators suffered reduced performance when detection probability was low, and we provide recommendations as to when each field and analytical technique is most appropriately employed. The large influence of scale of movement on estimator accuracy emphasizes the importance of effective post-hoc calculation of area sampled or use of methods that implicitly account for spatial variation. In particular, scale of movement impacted estimators substantially, such that area covered and spacing of detectors (e.g. cameras, traps, etc.) must reflect movement characteristics of the focal species to reduce bias in estimates of movement and thus density.

59 BASIC BIOLOGICAL SCIENCES↗

Mass movements on Venus - Preliminary results from Magellan cycle 1 observations

A preliminary assessment of mass movements and their geomorphic characteristics as determined from visual inspection of Magellan cycle 1 synthetic aperture radar images is described. The primary data set was a catalog of over 200 ten-inch square photographic prints of full-resolution mosaic image data records. Venus exhibits unambiguous evidence of mass movements at a variety of scales. Mass movements appear mostly in the form of block and rock movements; there is little evidence of regolith and sediment movements. Unique Venusian conditions may play a role in the creation of some mass movement features. Dark (smooth) surfaces surrounding many rockslide avalanches are probably fine materials emplaced as part of the mass movement process, as airfall, surface-hugging density flows, or coarse-depleted debris flows. The size and efficiency of emplacement of landslide deposits on Venus are comparable to those seen on Mars, which in turn generally resemble terrestrial occurrences.

Malin, Michael C.↗

Strategic and tactical use of movement information in pest management

Several insect movement problems are discussed. Much more information is needed to make a better appraisal of the practical significance of the insect dispersal problem. Data on the time, rate, and extent of movement of insects are provided. Better techniques for measuring insect movement are developed. A better understanding of the importance of insect movement in the development and implementation of more effective and ecologically acceptable pest management strategies and tactics was proved.

Knipling, E. F.↗

Three-dimensional boundary-layer transition on a cone at Mach 3.5

A boundary-layer transition study on a sharp, 5 deg half-angle cone at various angles of attack was conducted at Mach 3.5. Transition data were obtained with and without significantly reduced freestream acoustic disturbance levels. A progressive downstream and upstream motion of the transition front on the windward and leeward rays, respectively, of the cone with angle of attack was observed for the high noise level data in agreement with data trends obtained in conventional ('noisy') wind tunnels. However, the downstream movement was not observed to the same degree for the low noise level data in the present study. Transition believed to be crossflow dominated was found to be less receptive to freestream acoustic disturbances than first-mode (Tollmien-Schlichting) dominated transition. The previously-developed crossflow transition Reynolds number criterion was found to be inadequate for the current case. An improved criterion is offered, which includes compressibility and flow-geometry effects.

King, R. A.↗

Collocation and Pattern Recognition Effects on System Failure Remediation

Previous research found that operators prefer to have status, alerts, and controls located on the same screen. Unfortunately, that research was done with displays that were not designed specifically for collocation. In this experiment, twelve subjects evaluated two displays specifically designed for collocating system information against a baseline that consisted of dial status displays, a separate alert area, and a controls panel. These displays differed in the amount of collocation, pattern matching, and parameter movement compared to display size. During the data runs, subjects kept a randomly moving target centered on a display using a left-handed joystick and they scanned system displays to find a problem in order to correct it using the provided checklist. Results indicate that large parameter movement aided detection and then pattern recognition is needed for diagnosis but the collocated displays centralized all the information subjects needed, which reduced workload. Therefore, the collocated display with large parameter movement may be an acceptable display after familiarization because of the possible pattern recognition developed with training and its use.

Trujillo, Anna C.↗

Unique interface and dynamics of the complex of HSP90 with a specialized cochaperone AIPL1

Photoreceptor phosphodiesterase PDE6 is central for visual signal transduction. Maturation of PDE6 depends on a specialized chaperone complex of HSP90 with aryl hydrocarbon receptor-interacting protein-like 1 (AIPL1). Disruption of PDE6 maturation underlies a severe form of retina degeneration. Here, we report a 3.9 Å cryoelectron microscopy (cryo-EM) structure of the complex of HSP90 with AIPL1. This structure reveals a unique interaction of the FK506-binding protein (FKBP)-like domain of AIPL1 with HSP90 at its dimer interface. Unusually, the N terminus AIPL1 inserts into the HSP90 lumen in a manner that was observed previously for HSP90 clients. Deletion of the 7 N-terminal residues of AIPL1 decreased its ability to cochaperone PDE6. Multi-body refinement of the cryo-EM data indicated large swing-like movements of AIPL1-FKBP. Modeling the complex of HSP90 with AIPL1 using crosslinking constraints indicated proximity of the mobile tetratricopeptide repeat (TPR) domain with the C-terminal domain of HSP90. Our study establishes a framework for future structural studies of PDE6 maturation.

60 APPLIED LIFE SCIENCES↗

The structural basis for regulation of the glutathione transporter Ycf1 by regulatory domain phosphorylation

Yeast Cadmium Factor 1 (Ycf1) sequesters heavy metals and glutathione into the vacuole to counter cell stress. Ycf1 belongs to the ATP binding cassette C-subfamily (ABCC) of transporters, many of which are regulated by phosphorylation on intrinsically-disordered domains. The regulatory mechanism of phosphorylation is still poorly understood. Here, we report two cryo-EM structures of Ycf1 at 3.4 Å and 4.0 Å resolution in inward-facing open conformations that capture previously unobserved ordered states of the intrinsically disordered regulatory domain (R-domain). R-domain phosphorylation is clearly evident and induces a topology promoting electrostatic and hydrophobic interactions with Nucleotide Binding Domain 1 (NBD1) and the Lasso motif. These interactions stay constant between the structures and are related by rigid body movements of the NBD1/R-domain complex. Biochemical data further show R-domain phosphorylation reorganizes the Ycf1 architecture and is required for maximal ATPase activity. Together, we provide insights into how R-domains control ABCC transporter activity.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

The oculometer

Automatic acquisition and tracking of pupil-iris boundary and of corneal reflection of light source in oculometer using electro-optic method for eye direction measurement

DATA ACQUISITION↗

Effects of prolonged weightlessness on self-motion perception and eye movements evoked by roll and pitch

Seven astronauts reported translational self-motion during roll simulation 1-3 h after landing following 5-7 d of orbital flight. Two reported strong translational self-motion perception when they performed pitch head motions during entry and while the orbiter was stationary on the runway. One of two astronauts from whom adequate data were collected exhibited a 132-deg shift in the phase angle between roll stimulation and horizontal eye position 2 h after landing. Neither of two from whom adequate data were collected exhibited increased horizontal eye movement amplitude or disturbance of voluntary pitch or roll body motion immediately postflight. These results are generally consistent with an otolith tilt-translation reinterpretation model and are being applied to the development of apparatus and procedures intended to preadapt astronauts to the sensory rearrangement of weightlessness.

Reschke, Millard F.↗

A musculoskeletal model of the elbow joint complex

This paper describes a musculoskeletal model that represents human elbow flexion-extension and forearm pronation-supination. Musculotendon parameters and the skeletal geometry were determined for the musculoskeletal model in the analysis of ballistic elbow joint complex movements. The key objective was to develop a computational model, guided by optimal control, to investigate the relationship among patterns of muscle excitation, individual muscle forces, and movement kinematics. The model was verified using experimental kinematic, torque, and electromyographic data from volunteer subjects performing both isometric and ballistic elbow joint complex movements. In general, the model predicted kinematic and muscle excitation patterns similar to what was experimentally measured.

Gonzalez, Roger V.↗

Designing a successful HMD-based experience

For entertainment applications, a successful virtual experience based on a head-mounted display (HMD) needs to overcome some or all of the following problems: entering a virtual world is a jarring experience, people do not naturally turn their heads or talk to each other while wearing an HMD, putting on the equipment is hard, and people do not realize when the experience is over. In the Electric Garden at SIGGRAPH 97, we presented the Mad Hatter's Tea Party, a shared virtual environment experienced by more than 1,500 SIGGRAPH attendees. We addressed these HMD-related problems with a combination of back story, see-through HMDs, virtual characters, continuity of real and virtual objects, and the layout of the physical and virtual environments.

NASA Center ARC↗

Evaluating Coastal Landscape Response to Sea-Level Rise in the Northeastern United States - Approach and Methods

The U.S. Geological Survey is examining effects of future sea-level rise on the coastal landscape from Maine to Virginia by producing spatially explicit, probabilistic predictions using sea-level projections, vertical land movement rates (due to isostacy), elevation data, and land-cover data. Sea-level-rise scenarios used as model inputs are generated by using multiple sources of information, including Coupled Model Intercomparison Project Phase 5 models following representative concentration pathways 4.5 and 8.5 in the Intergovernmental Panel on Climate Change Fifth Assessment Report. A Bayesian network is used to develop a predictive coastal response model that integrates the sea-level, elevation, and land-cover data with assigned probabilities that account for interactions with coastal geomorphology as well as the corresponding ecological and societal systems it supports. The effects of sea-level rise are presented as (1) level of landscape submergence and (2) coastal response type characterized as either static (that is, inundation) or dynamic (that is, landform or landscape change). Results are produced at a spatial scale of 30 meters for four decades (the 2020s, 2030s, 2050s, and 2080s). The probabilistic predictions can be applied to landscape management decisions based on sea-level-rise effects as well as on assessments of the prediction uncertainty and need for improved data or fundamental understanding. This report describes the methods used to produce predictions, including information on input datasets; the modeling approach; model outputs; data-quality-control procedures; and information on how to access the data and metadata online.

terrain↗

Comparison of Taxi Time Prediction Performance Using Different Taxi Speed Decision Trees

In the STBO modeler and tactical surface scheduler for ATD-2 project, taxi speed decision trees are used to calculate the unimpeded taxi times of flights taxiing on the airport surface. The initial taxi speed values in these decision trees did not show good prediction accuracy of taxi times. Using the more recent, reliable surveillance data, new taxi speed values in ramp area and movement area were computed. Before integrating these values into the STBO system, we performed test runs using live data from Charlotte airport, with different taxi speed settings: 1) initial taxi speed values and 2) new ones. Taxi time prediction performance was evaluated by comparing various metrics. The results show that the new taxi speed decision trees can calculate the unimpeded taxi-out times more accurately.

taxi time prediction↗

Investigating Astromaterials Curation Applications for Dexterous Robotic Arms

The Astromaterials Acquisition and Curation office at NASA Johnson Space Center is currently investigating tools and methods that will enable the curation of future astromaterials collections. Size and temperature constraints for astromaterials to be collected by current and future proposed missions will require the development of new robotic sample and tool handling capabilities. NASA Curation has investigated the application of robot arms in the past, and robotic 3-axis micromanipulators are currently in use for small particle curation in the Stardust and Cosmic Dust laboratories. While 3-axis micromanipulators have been extremely successful for activities involving the transfer of isolated particles in the 5-20 micron range (e.g. from microscope slide to epoxy bullet tip, beryllium SEM disk), their limited ranges of motion and lack of yaw, pitch, and roll degrees of freedom restrict their utility in other applications. For instance, curators removing particles from cosmic dust collectors by hand often employ scooping and rotating motions to successfully free trapped particles from the silicone oil coatings. Similar scooping and rotating motions are also employed when isolating a specific particle of interest from an aliquot of crushed meteorite. While cosmic dust curators have been remarkably successful with these kinds of particle manipulations using handheld tools, operator fatigue limits the number of particles that can be removed during a given extraction session. The challenges for curation of small particles will be exacerbated by mission requirements that samples be processed in N2 sample cabinets (i.e. gloveboxes). We have been investigating the use of compact robot arms to facilitate sample handling within gloveboxes. Six-axis robot arms potentially have applications beyond small particle manipulation. For instance, future sample return missions may involve biologically sensitive astromaterials that can be easily compromised by physical interaction with a curator; other potential future returned samples may require cryogenic curation. Robot arms may be combined with high resolution cameras within a sample cabinet and controlled remotely by curator. Sophisticated robot arm and hand combination systems can be programmed to mimic the movements of a curator wearing a data glove; successful implementation of such a system may ultimately allow a curator to virtually operate in a nitrogen, cryogenic, or biologically sensitive environment with dexterity comparable to that of a curator physically handling samples in a glove box.

Snead, C. J.↗

AstroAmpSeq: Microbial Bioinformatics Education with NASA GeneLab’s Amplicon Pipeline

The prevalence and importance of large sequencing datasets in microbiology has led to a movement to share microbial ecology experimental data through open-access databases. This is particularly true of experiments that are difficult to replicate, such as those conducted in the spaceflight environment and shared via NASA GeneLab. It is now possible and indeed valuable for students to access and re-analyze these shared datasets for educational and research purposes. To provide students with experience utilizing microbial bioinformatics tools, GeneLab for Colleges and Universities (GL4U) has designed AstroAmpSeq, a week-long, virtually implemented project-based learning (PBL) minicourse to instruct undergraduate students on 16S amplicon sequencing. AstroAmpSeq was created to be accessible to students without prior bioinformatics or microbial ecology experience. During the minicourse students work in teams to process, analyze, and visualize a subsample of GeneLab dataset GLDS-280 using GeneLab’s standard amplicon processing pipeline, which is based in R. Students develop a hypothesis related to the dataset then generate and analyze figures to evaluate their hypothesis. Formative assessment of student learning is determined via pre- and post-evaluations, peer feedback, and self-reflection. Project and presentation rubrics serve as a summative assessment of student learning. GL4U AstroAmpSeq not only meets American Society for Microbiology Curriculum Guidelines, but also incites student interest in research by an inquiry-based approach and can be made part of a larger semester-long curriculum. GL4U AstroAmpSeq raises awareness of space microbiology and bioinformatics as a field and career path among undergraduates. Further, by using a GeneLab dataset and nesting microbiology techniques into the real-world application of space biology, AstroAmpSeq enforces deeper and longer-lasting student learning.

microbiology↗