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NASA NTRS1978

Landsat spectral signatures - Studies with soil associations and vegetation

The effect of soils and vegetation upon Landsat spectral properties was investigated for a 12,950 hectare area. Six soil associations used for corn, small grains, and grass were analyzed for two dates during the 1974 growing season. Landsat scenes for April 19 and June 30 were studied to separate categories of agricultural land use and to assess the influence of soil association on the spectral signatures of vegetation and bare ground. The April 19 data were useful to separate cropland from grassland and to locate areas of open water. The June 30 data showed that soil associations could not consistently be separated within the data of a single vegetative type; however, the results showed that soils did influence all vegetative spectral reflectances to some degree. Because soils did influence vegetative spectral reflectance, a generalized training set containing data points from each of the six soil associations was used to separate four categories of agricultural land use in the 12,950 hectare test area. An accuracy of about 94% was obtained.

Westin, F. C.↗

NASA NTRS2018

GeneLab: Omics Database for Spaceflight Experiments

Motivation - To curate and organize expensive spaceflight experiments conducted aboard space stations and maximize the scientific return of investment, while democratizing access to vast amounts of spaceflight related omics data generated from several model organisms. Results - The GeneLab Data System (GLDS) is an open access database containing fully coordinated and curated "omics" (genomics, transcriptomics, proteomics, metabolomics) data, detailed metadata and radiation dosimetry for a variety of model organisms. GLDS is supported by an integrated data system allowing federated search across several public bioinformatics repositories. Archived datasets can be queried using full-text search (e.g., keywords, Boolean and wildcards) and results can be sorted in multifactorial manner using assistive filters. GLDS also provides a collaborative platform built on GenomeSpace for sharing files and analyses with collaborators. It currently houses 172 datasets and supports standard guidelines for submission of datasets, MIAME (for microarray), ENCODE Consortium Guidelines (for RNA-seq) and MIAPE Guidelines (for proteomics).

omics↗

NASA NTRS1984

Airfoil trailing edge flow measurements and comparison with theory, incorporating open wind tunnel corrections

Trailing edge data for boundary layer-near wake thickness parameters are given for airfoils and flat plates. Reynolds number effects are examined as a function of model size, velocity and boundary layer tripping. These data expand that presented previously by the authors particularly for airfoil non-zero angles of attack. Comparisons are made here with boundary layer calculations using potential flow modeling and a well documented two-dimensional finite-difference method for laminar and turbulent boundary layers. Open wind tunnel corrections to angle of attack and camber are developed and are incorporated in the potential flow modeling to assure correct comparisons for non-zero angles of attack. It was found that although the open tunnel flow turbulence affected boundary layer transition for the higher velocities the theory successfully 'brackets' the data. Comparisons demonstrate the degree of accuracy one might expect for the prediction of boundary layer thickness parameters when given only geometry and nominal flow conditions as input to boundary layer codes.

Brooks, T. F.↗

NASA NTRS2018

GeneLab Analysis Working Group Kick-Off Meeting

Goals to achieve for GeneLab AWG - GL vision - Review of GeneLab AWG charter Timeline and milestones for 2018 Logistics - Monthly Meeting - Workshop - Internship - ASGSR Introduction of team leads and goals of each group Introduction of all members Q/A Three-tier Client Strategy to Democratize Data Physiological changes, pathway enrichment, differential expression, normalization, processing metadata, reproducibility, Data federation/integration with heterogeneous bioinformatics external databases The GLDS currently serves over 100 omics investigations to the biomedical community via open access. In order to expand the scope of metadata record searches via the GLDS, we designed a metadata warehouse that collects and updates metadata records from external systems housing similar data. To demonstrate the capabilities of federated search and retrieval of these data, we imported metadata records from three open-access data systems into the GLDS metadata warehouse: NCBI's Gene Expression Omnibus (GEO), EBI's PRoteomics IDEntifications (PRIDE) repository, and the Metagenomics Analysis server (MG-RAST). Each of these systems defines metadata for omics data sets differently. One solution to bridge such differences is to employ a common object model (COM) to which each systems' representation of metadata can be mapped. Warehoused metadata records are then transformed at ETL to this single, common representation. Queries generated via the GLDS are then executed against the warehouse, and matching records are shown in the COM representation (Fig. 1). While this approach is relatively straightforward to implement, the volume of the data in the omics domain presents challenges in dealing with latency and currency of records. Furthermore, the lack of a coordinated has been federated data search for and retrieval of these kinds of data across other open-access systems, so that users are able to conduct biological meta-investigations using data from a variety of sources. Such meta-investigations are key to corroborating findings from many kinds of assays and translating them into systems biology knowledge and, eventually, therapeutics.

GeneLab↗

NASA NTRSDate not supplied

Promoting Collaborative Open Science through the Stakeholder Engagement Program

Since 2016, the Satellite Needs Working Group (SNWG), an initiative of the U.S. Group on Earth Observations (USGEO), has surveyed federal agencies biennially to identify their satellite Earth observation needs. Coordinating with the agencies, NASA-led assessment teams work to identify solutions for each expressed need. Solutions to a need can involve existing data products or even the formation of new data products and technologies, such as the Harmonized Landsat Sentinel-2 (HLS) product and the Catalog of Archived Sub-Orbital Earth Science Investigations (CASEI). To enhance community engagement with these new data products and technologies, the SNWG Management Office’s Stakeholder Engagement Program (SEP) was established. The SEP within NASA’s Interagency Implementation and Advanced Concepts Team (IMPACT) at Marshall Space Flight Center has three goals: to increase awareness of the SNWG survey and its outcomes, to ensure training coordination and outreach efforts supporting integration and use of SNWG solutions, and to enhance coordination among solution development teams, NASA’s Distributed Active Archive Centers (DAACs), SNWG stakeholders, and end user communities. These goals align with NASA Earth Science Data System’s (ESDS) Open Science initiative by establishing a collaborative community focused on enhancing scientific research at diverse levels of understanding. This presentation will highlight SEP’s facilitation of these open science goals through its support in SNWG’s past and current survey cycles as well as its plans for future involvement.

Jenny Wood↗

NASA NTRS2014

Open Rotor Tone Shielding Methods for System Noise Assessments Using Multiple Databases

Advanced aircraft designs such as the hybrid wing body, in conjunction with open rotor engines, may allow for significant improvements in the environmental impact of aviation. System noise assessments allow for the prediction of the aircraft noise of such designs while they are still in the conceptual phase. Due to significant requirements of computational methods, these predictions still rely on experimental data to account for the interaction of the open rotor tones with the hybrid wing body airframe. Recently, multiple aircraft system noise assessments have been conducted for hybrid wing body designs with open rotor engines. These assessments utilized measured benchmark data from a Propulsion Airframe Aeroacoustic interaction effects test. The measured data demonstrated airframe shielding of open rotor tonal and broadband noise with legacy F7/A7 open rotor blades. Two methods are proposed for improving the use of these data on general open rotor designs in a system noise assessment. The first, direct difference, is a simple octave band subtraction which does not account for tone distribution within the rotor acoustic signal. The second, tone matching, is a higher-fidelity process incorporating additional physical aspects of the problem, where isolated rotor tones are matched by their directivity to determine tone-by-tone shielding. A case study is conducted with the two methods to assess how well each reproduces the measured data and identify the merits of each. Both methods perform similarly for system level results and successfully approach the experimental data for the case study. The tone matching method provides additional tools for assessing the quality of the match to the data set. Additionally, a potential path to improve the tone matching method is provided.

Bahr, Christopher J.↗

NASA NTRS1997

Carbon in the Former Soviet Union: The Current Balance

This work has been carried out in a period of great changes in Russia that have brought extreme hardships to the scientific community. We have been fortunate in establishing excellent relationships with the Russian scientific community and believe we have helped to retain coherence in circumstances where the continuation of research was in doubt. We have learned much and have been effective in advancing, even establishing, scholars and programs in Russia that might not otherwise have survived the transition. The vigor of the International Boreal Forest Research Association (IBFRA) is one sign of the value and success of these activities. Largely due to the current political and economic transitions in the former Soviet Union, the forests of much of the FSU are under reduced logging pressure. In addition, there is a decline in air pollution as heavy industry has waned, at least for now. Russian forestry statistics and our personal experience indicate a decline, perhaps as high as 60%, in forest harvesting over the last few years. But, new international market pressures on the forests exist in European Russia and in the Far East. The central government, still the "owner" of Russian forests, is having difficulty maintaining control over forest use and management particularly in the Far East and among the southern territories that have large, nonRussian ethnic populations. Extraordinarily large areas of mixed forest and grasslands, sparse or open forests, and mixed forests and tundra must be considered when calculating forest area It is insufficient to think of Russia as simply forest and nonforest Forest productivity, measured as growth of timber, appears to be in decline in all areas of Russia except in European Russia. Most information and publications on the recent history of these forests is heavily dependent on statistical data from the Soviet era. The interpretation of these data is very much open to debate. Anatoly Shwidenko, a long term collaborator and former senior scientist (mensuration) for the Soviet Committee on Forests, now a scholar at the International Institute of Applied Systems Analysis (IIASA), Vienna, has provided abundant contributions from the data available to him and from his experience. Forest stand carbon is concentrated in the Russian Far East (i.e. Primorski Kray), Central-Southern Siberia and European Russia But, soil carbon can be 10 times forest stand C. Our efforts in mapping the area and changes in area (as well as the internal structure) of forests have made major contributions to our joint understanding of the scale and status of these forests. To realize the importance of this contribution one needs only to recognize that any large scale Soviet-era maps of the area did not include latitude and longitude. Even today, there is great reluctance to provide these data, the basis of any GIS.

Woodwell, G. M.↗

NASA NTRS2005

Flux Transfer Event in the Subsolar Region and Near the Cusp: Simultaneous Polar and Cluster Observations

The phenomenon called flux transfer events (FTEs) is widely accepted as the manifestation of time-dependent reconnection. In this paper, we present an observational evidence of a flux transfer event observed simultaneously at low-latitude by Polar and high-latitude by Cluster. This event occurred on March 21, 2002, when both Cluster and Polar were located near the local noon but with large latitudinal distance. Cluster was moving outbound from polar cusp to the magnetosheath, and Polar was in the magnetosheath near the equatorial magnetopause. The observations show that a flux transfer event was formed between the equator and the northern cusp. Polar and Cluster observed the FTE's two open flux tubes: Polar saw the southward moving flux tube near the equator; and Cluster the , northward moving flux tube at high latitude. Unlike low-latitude FTEs, the high-latitude FTE did not exhibit the characteristic bi-polar BN signature. But the plasma data clearly showed its open flux tube configuration. Enhanced electric field fluctuations were observed within the FTE core, both at low- and high-attitudes. This event provides us a unique opportunity to understand high-latitude FTE signatures and the nature of time-varying reconnection.

Le, G.↗

NASA NTRS2011

Evaluation and Windspeed Dependence of MODIS Aerosol Retrievals Over Open Ocean

The Maritime Aerosol Network (MAN) data set provides high quality ground-truth to validate the MODIS aerosol product over open ocean. Prior validation of the ocean aerosol product has been limited to coastal and island sites. Comparing MODIS Collection 5 ocean aerosol retrieval products with collocated MAN measurements from ships shows that MODIS is meeting the pre-launch uncertainty estimates for aerosol optical depth (AOD) with 64% and 67% of retrievals at 550 nm, and 74% and 78% of retrievals at 870 nm, falling within expected uncertainty for Terra and Aqua, respectively. Angstrom Exponent comparisons show a high correlation between MODIS retrievals and shipboard measurements (R= 0.85 Terra, 0.83 Aqua), although the MODIS aerosol algorithm tends to underestimate particle size for large particles and overestimate size for small particles, as seen in earlier Collections. Prior analysis noted an offset between Terra and Aqua ocean AOD, without concluding which sensor was more accurate. The simple linear regression reported here, is consistent with other anecdotal evidence that Aqua agreement with AERONET is marginally better. However we cannot claim based on the current study that the better Aqua comparison is statistically significant. Systematic increase of error as a function of wind speed is noted in both Terra and Aqua retrievals. This wind speed dependency enters the retrieval when winds deviate from the 6 m/s value assumed in the rough ocean surface and white cap parameterizations. Wind speed dependency in the results can be mitigated by using auxiliary NCEP wind speed information in the retrieval process.

Kleidman, Richard G.↗

NASA NTRS2012

Accuracy Assessment of Aqua-MODIS Aerosol Optical Depth Over Coastal Regions: Importance of Quality Flag and Sea Surface Wind Speed

Coastal regions around the globe are a major source for anthropogenic aerosols in the atmosphere, but the underlying surface characteristics are not favorable for the Moderate Resolution Imaging Spectroradiometer (MODIS) algorithms designed for retrieval of aerosols over dark land or open-ocean surfaces. Using data collected from 62 coastal stations worldwide from the Aerosol Robotic Network (AERONET) from approximately 2002-2010, accuracy assessments are made for coastal aerosol optical depth (AOD) retrieved from MODIS aboard Aqua satellite. It is found that coastal AODs (at 550 nm) characterized respectively by the MODIS Dark Land (hereafter Land) surface algorithm, the Open-Ocean (hereafter Ocean) algorithm, and AERONET all exhibit a log-normal distribution. After filtering by quality flags, the MODIS AODs respectively retrieved from the Land and Ocean algorithms are highly correlated with AERONET (with R(sup 2) is approximately equal to 0.8), but only the Land algorithm AODs fall within the expected error envelope greater than 66% of the time. Furthermore, the MODIS AODs from the Land algorithm, Ocean algorithm, and combined Land and Ocean product show statistically significant discrepancies from their respective counterparts from AERONET in terms of mean, probability density function, and cumulative density function, which suggest a need for future improvement in retrieval algorithms. Without filtering with quality flag, the MODIS Land and Ocean AOD dataset can be degraded by 30-50% in terms of mean bias. Overall, the MODIS Ocean algorithm overestimates the AERONET coastal AOD by 0.021 for AOD less than 0.25 and underestimates it by 0.029 for AOD greater than 0.25. This dichotomy is shown to be related to the ocean surface wind speed and cloud contamination effects on the satellite aerosol retrieval. The Modern Era Retrospective-Analysis for Research and Applications (MERRA) reveals that wind speeds over the global coastal region 25 (with a mean and median value of 2.94 meters per second and 2.66 meters per second, respectively) are often slower than 6 meters per second assumed in the MODIS Ocean algorithm. As a result of high correlation (R(sup 2) greater than 0.98) between the bias in binned MODIS AOD and the corresponding binned wind speed over the coastal sea surface, an empirical scheme for correcting the bias of AOD retrieved from the MODIS Ocean algorithm is formulated and is shown to be effective over the majority of the coastal AERONET stations, and hence can be used in future analysis of AOD trend and MODIS AOD data assimilation.

Anderson, J. C.↗

NASA NTRS1981

Wintertime microwave observations of the North Water polynya

Electronically Scanning Microwave Radiometer data from Nimbus 5 have been used to examine variations in the area of the North Water polynya, i.e., an area of reduced ice concentration in a region of predominantly ice-covered water, during the winter periods 1973-74, 1974-75, and 1975-76. It is found that the North Water polynya opens and closes repeatedly during the winter season, being open roughly 30% of the time between October and May. No strong correlations are found between this opening and limited atmospheric data available from three surrounding stations.

Crawford, J. P.↗

NASA NTRS2011

RAPID and DDS

This talk gives an overview of the the Robot Applications Programmers Interface Delegate (RAPID) as well as the distributed systems middleware Data Distribution Service (DDS). DDS is an open software standard, RAPID is cleared for open-source release under NOSA. RAPID specifies data-structures and semantics for high-level telemetry published by NASA robotic software. These data-structures are supported by multiple robotic platforms at Johnson Space Center (JSC), Jet Propulsion Laboratory (JPL) and Ames Research Center (ARC), providing high-level interoperability between those platforms. DDS is used as the middleware for data transfer. The feature set of the middleware heavily influences the design decision made in the RAPID specification. So it is appropriate to discuss both in this introductory talk.

Utz, Hans Heinrich↗

NASA NTRSDate not supplied

Earth System Digital Twins (ESDT) Technology for NASA Earth Science

For NASA's Advanced Information Systems Technology (AIST) Program, an Earth System Digital Twin (ESDT) is defined as an interactive and integrated multidomain, multiscale, digital replica of the state and temporal evolution of Earth systems. It dynamically integrates: relevant Earth system models and simulations; other relevant models (e.g., related to the world's infrastructure); continuous and timely (including near real time and direct readout) observations (e.g., space, air, ground, over/underwater, Internet of Things (IoT), socioeconomic); long-time records; as well as analytics and artificial intelligence tools. Effective ESDTs enable users to run hypothetical scenarios to improve the understanding, prediction of and mitigation/response to Earth system processes, natural phenomena and human activities as well as their many interactions. An ESDT is a type of integrated information system that, for example, enables continuous assessment of impact from naturally occurring and/or human activities on physical and natural environments. AIST ESDT strategic goals are to: 1. Develop information system frameworks to provide continuous and accurate representations of systems as they change over time; 2. Mirror various Earth Science systems and utilize the combination of Data Analytics, Artificial Intelligence, Digital Thread, and state-of-the-art models to help predict the Earth’s response to various phenomena; 3. Provide the tools to conduct "what if" investigations that can result in actionable predictions. The AIST ESDT thrust is developing capabilities toward the development of future digital twins of the Earth or of subcomponents of the Earth. This will enable the development of an overarching framework that will integrate New Observing Strategies (NOS) to enable new observation measurements, i.e., multi-source, coordinated, dynamic and responsive to needs and requests defined by Analytic Collaborative Frameworks (ACF) that enable agile science investigations fusing and analyzing very large amounts of diverse data. NOS and ACF capabilities along with open access to various science, infrastructure and human data, interconnected modeling, data assimilation, simulations, surrogate modeling, high-performance computing and advanced visualization, will define a powerful framework that could be utilized for local, regional or global and/or thematic digital twins. This presentation will describe a general overview of the AIST ESDT vision including prior work done in the areas of NOS and ACF as well as current and upcoming ESDT projects.

Jacqueline Le Moigne↗

NASA NTRSDate not supplied

Optimizing a Small RNAseq Analysis Pipeline for NASA GeneLab Using Open-Source Tools and Libraries

Small RNA sequencing (small RNAseq) is a powerful tool for studying the regulation of gene expression in various organisms. Small RNAseq has been leveraged in space biology research to study how expression of small RNAs, e.g. micro RNAs (miRNAs), small interfering RNAs (siRNAs), and piwi-interacting RNAs (piRNAs), change upon exposure to the space environment. NASA GeneLab currently hosts small RNAseq raw data derived from space-relevant experiments on the Open Science Data Repository (OSDR). To maximize the accessibility of these data to the scientific community, in addition to hosting raw data, which is only interpretable by bioinformaticians, GeneLab plans to process all small RNAseq datasets and make those processed data available to the scientific community via the OSDR. In this study, we present the development of the GeneLab standardized pipeline for processing small RNAseq datasets. Using human, plant, and synthetic small RNAseq datasets, we interrogate various open-source software and publicly available databases to evaluate their accuracy and reproducibility in each step of the pipeline. For quality control and adapter detection and trimming, we evaluated TrimGalore!, FASTX, SeqKit, and DNApi methods to optimize alignment to reference genomes. We compared BWA, Bowtie, and Bowtie2 to determine the optimal alignment tool. For each alignment tool we also assessed various reference databases, including Ensembl reference genomes and different types of small RNA reference databases, including genome, hairpin, and miRNA references from the miRbase and MirGeneDB databases. To quantify the aligned data, we compared SAMtools, HTSeq, and RSEM for counting alignment events from each alignment tool used. Finally, we evaluated various tools, including DESeq2 and EdgeR, for data normalization and subsequent differential expression analysis. We will present the results from our comparative analyses for each pipeline step and propose a consensus pipeline for processing small RNAseq data derived from various organisms exposed to the space environment.

SmallRNAseq, NASA GeneLab, quality control, adapte↗

NASA NTRS1992

Computational simulation of coupled material degradation processes for probabilistic lifetime strength of aerospace materials

The research included ongoing development of methodology that provides probabilistic lifetime strength of aerospace materials via computational simulation. A probabilistic material strength degradation model, in the form of a randomized multifactor interaction equation, is postulated for strength degradation of structural components of aerospace propulsion systems subjected to a number of effects or primative variables. These primative variable may include high temperature, fatigue or creep. In most cases, strength is reduced as a result of the action of a variable. This multifactor interaction strength degradation equation has been randomized and is included in the computer program, PROMISS. Also included in the research is the development of methodology to calibrate the above described constitutive equation using actual experimental materials data together with linear regression of that data, thereby predicting values for the empirical material constraints for each effect or primative variable. This regression methodology is included in the computer program, PROMISC. Actual experimental materials data were obtained from the open literature for materials typically of interest to those studying aerospace propulsion system components. Material data for Inconel 718 was analyzed using the developed methodology.

Boyce, Lola↗

NASA NTRS2000

BOREAS TGB-5 Dissolved Organic Carbon Data from NSA Beaver Ponds

The BOReal Ecosystem-Atmosphere Study Trace Gas Biogeochemistry (BOREAS TGB-5) team collected several data sets related to carbon and trace gas fluxes and concentrations in the Northern Study Area (NSA). This data set contains concentrations of dissolved organic and inorganic carbon species from water samples collected at various NSA sites. In particular, this set covers the NSA Tower Beaver Pond Site and the NSA Gillam Road Beaver Pond Site, including data from all visits to open water sampling locations during the BOREAS field campaigns from April to September 1994. The data are provided in tabular ASCII files.

Bourbonniere, Rick↗

NASA NTRS2008

Review of End-of-Life Thermal Control Coating Performance

White thermal control coatings capable of long term performance are needed for Fission Surface Power (FSP) where heat from a nuclear reactor placed on the surface of the Moon must be rejected to the environment. The threats to thermal control coating durability on the lunar surface are electrons, protons, and ultraviolet radiation. The anticipated damage to the coating is a gradual darkening over time. The increase in solar absorptance would, in essence, add a cyclic heat load to the radiator. The greater the darkening, the greater the added heat load. The cyclic heat load could ultimately impart a cyclic influence on FSP system performance. No significant change in emittance is anticipated. Optical properties degradation data were found in the open literature for the Z-93 series of thermal control paints. Additional optical properties degradation data were found from the Lunar Orbiter V mission, the Optical Properties Monitor, and the Materials International Space Station Experiment. Anticipated end-of-life thermal control coating performance for a FSP installation is postulated. With the FSP installation located away from landing and launching areas, and out of line-of-sight, lunar dust from human activity may not be a threat. The benefits of investing in next generation thermal control paint chemistry are explored.

Jaworske, Donald A.↗

NASA NTRS2011

Reliability of Ceramic Column Grid Array Interconnect Packages Under Extreme Temperatures

A paper describes advanced ceramic column grid array (CCGA) packaging interconnects technology test objects that were subjected to extreme temperature thermal cycles. CCGA interconnect electronic package printed wiring boards (PWBs) of polyimide were assembled, inspected nondestructively, and, subsequently, subjected to ex - treme-temperature thermal cycling to assess reliability for future deep-space, short- and long-term, extreme-temperature missions. The test hardware consisted of two CCGA717 packages with each package divided into four daisy-chained sections, for a total of eight daisy chains to be monitored. The package is 33 33 mm with a 27 27 array of 80%/20% Pb/Sn columns on a 1.27-mm pitch. The change in resistance of the daisy-chained CCGA interconnects was measured as a function of the increasing number of thermal cycles. Several catastrophic failures were observed after 137 extreme-temperature thermal cycles, as per electrical resistance measurements, and then the tests were continued through 1,058 thermal cycles to corroborate and understand the test results. X-ray and optical inspection have been made after thermal cycling. Optical inspections were also conducted on the CCGA vs. thermal cycles. The optical inspections were conclusive; the x-ray images were not. Process qualification and assembly is required to optimize the CCGA assembly, which is very clear from the x-rays. Six daisy chains were open out of seven daisy chains, as per experimental test data reported. The daisy chains are open during the cold cycle, and then recover during the hot cycle, though some of them also opened during the hot thermal cycle..

Ramesham, Rajeshuni↗