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At least 505 records · Page 28

A Multi-Sensor Unoccupied Aerial System Improves Characterization of Vegetation Composition and Canopy Properties in the Arctic Tundra: Supporting Data

Remote sensing data collected from Brookhaven National Laboratory's (BNL) heavy-lift unoccupied aerial system (UAS) octocopter platform - the Osprey - operated by the Terrestrial Ecosystem Science and Technology (TEST) group. Data was collected from a single flight over the Kougarok hillslope site on 26 July, 2018. The Osprey is a multi-sensor UAS platform that simultaneously measures very high spatial resolution optical red/green/blue (RGB) and thermal infrared (TIR) surface "skin" temperature imagery, as well as surface reflectance at 1nm intervals in the visible to near-infrared spectral range from ~350-1000 nm measured at regular intervals along each flight path. Derived image products include ortho-mosaiced RGB and TIR images, an RGB-based digital surface model (DSM) using the structure from motion (SfM) technique, digital terrain model (DTM), and a canopy height model. Ancillary aircraft data, flight mission parameters, and general flight conditions are also included. This dataset includes *.pdf, *.txt, *.tif, *.dat, and *.csv with most zipped in *.tar.gz files. The Next-Generation Ecosystem Experiments: Arctic (NGEE Arctic), was a research effort to reduce uncertainty in Earth System Models by developing a predictive understanding of carbon-rich Arctic ecosystems and feedbacks to climate. NGEE Arctic was supported by the Department of Energy's Office of Biological and Environmental Research. The NGEE Arctic project had two field research sites: 1) located within the Arctic polygonal tundra coastal region on the Barrow Environmental Observatory (BEO) and the North Slope near Utqiagvik (Barrow), Alaska and 2) multiple areas on the discontinuous permafrost region of the Seward Peninsula north of Nome, Alaska. Through observations, experiments, and synthesis with existing datasets, NGEE Arctic provided an enhanced knowledge base for multi-scale modeling and contributed to improved process representation at global pan-Arctic scales within the Department of Energy's Earth system Model (the Energy Exascale Earth System Model, or E3SM), and specifically within the E3SM Land Model component (ELM).

54 ENVIRONMENTAL SCIENCES↗

The improvement of star positions by photographic methods

A brief description is given of the new astrometric camera and of the program on which it is being employed. This is the photography of the southern sky so that each star appears on at least four overlapping plates. Sets of star coordinates measured on each plate are combined with a limited set of provisional meridian places to give an accurate set of relative star positions which are independent of the meridian system together with a set of residuals for each plate-star. The technique is based on a simple geometrical model of image formation on photographic plates. Current investigations are concerned with the elimination of sources of systematic deviation from this model.

Clube, S. V. M.↗

Image Discrimination Models Predict Object Detection in Natural Backgrounds

Object detection involves looking for one of a large set of object sub-images in a large set of background images. Image discrimination models only predict the probability that an observer will detect a difference between two images. In a recent study based on only six different images, we found that discrimination models can predict the relative detectability of objects in those images, suggesting that these simpler models may be useful in some object detection applications. Here we replicate this result using a new, larger set of images. Fifteen images of a vehicle in an other-wise natural setting were altered to remove the vehicle and mixed with the original image in a proportion chosen to make the target neither perfectly recognizable nor unrecognizable. The target was also rotated about a vertical axis through its center and mixed with the background. Sixteen observers rated these 30 target images and the 15 background-only images for the presence of a vehicle. The likelihoods of the observer responses were computed from a Thurstone scaling model with the assumption that the detectabilities are proportional to the predictions of an image discrimination model. Three image discrimination models were used: a cortex transform model, a single channel model with a contrast sensitivity function filter, and the Root-Mean-Square (RMS) difference of the digital target and background-only images. As in the previous study, the cortex transform model performed best; the RMS difference predictor was second best; and last, but still a reasonable predictor, was the single channel model. Image discrimination models can predict the relative detectabilities of objects in natural backgrounds.

Ahumada, Albert J., Jr.↗

Near-Infrared Continuum and 3.3um PAH Imaging of the Starburst Ring in the Type I Seyfert Galaxy NGC 7469

High resolution near-infrared images of the type 1 Seyfert Galaxy NGC 7469 have been obtained to probe its dusty nuclear environment. Direct images are relatively featureless, but residual images created by subtacting a smooth model based on best-fitting elliptical isoophotes reveal a tight inner spiral whose high surface-brightness portions correspond to a previously detected 3.

ring↗

A Method for Retrieving Ground Flash Fraction from Satellite Lightning Imager Data

A general theory for retrieving the fraction of ground flashes in N lightning observed by a satellite-based lightning imager is provided. An "exponential model" is applied as a physically reasonable constraint to describe the measured optical parameter distributions, and population statistics (i.e., mean, variance) are invoked to add additional constraints to the retrieval process. The retrieval itself is expressed in terms of a Bayesian inference, and the Maximum A Posteriori (MAP) solution is obtained. The approach is tested by performing simulated retrievals, and retrieval error statistics are provided. The ability to retrieve ground flash fraction has important benefits to the atmospheric chemistry community. For example, using the method to partition the existing satellite global lightning climatology into separate ground and cloud flash climatologies will improve estimates of lightning nitrogen oxides (NOx) production; this in turn will improve both regional air quality and global chemistry/climate model predictions.

Koshak, William J.↗

MO-FG-204-04: How Iterative Reconstruction Algorithms Affect the NPS of CT Images

Purpose: To evaluate how the third generation model based iterative reconstruction (MBIR) compares with filtered back-projection (FBP), adaptive statistical iterative reconstruction (ASiR), and the second generation MBIR based on noise power spectrum (NPS) analysis over a wide range of clinically applicable dose levels. Methods: The Catphan 600 CTP515 module, surrounded by an oval, fat-equivalent ring to mimic patient size/shape, was scanned on a GE HD750 CT scanner at 1, 2, 3, 6, 12 and 19mGy CTDIvol levels with typical patient scan parameters: 120kVp, 0.8s, 40mm beam width, large SFOV, 0.984 pitch and reconstructed thickness 2.5mm (VEO3.0: Abd/Pelvis with Texture and NR05). At each CTDIvol level, 10 repeated scans were acquired for achieving sufficient data sampling. The images were reconstructed using Standard kernel with FBP; 20%, 40% and 70% ASiR; and two versions of MBIR (VEO2.0 and 3.0). For evaluating the effect of the ROI spatial location to the Result of NPS, 4 ROI groups were categorized based on their distances from the center of the phantom. Results: VEO3.0 performed inferiorly comparing to VEO2.0 over all dose levels. On the other hand, at low dose levels (less than 3 mGy), it clearly outperformed ASiR and FBP, in NPS values. Therefore, the lower the dose level, the relative performance of MBIR improves. However, the shapes of the NPS show substantial differences in horizontal and vertical sampling dimensions. These differences may determine the characteristics of the noise/texture features in images, and hence, play an important role in image interpretation. Conclusion: The third generation MBIR did not improve over the second generation MBIR in term of NPS analysis. The overall performance of both versions of MBIR improved as compared to other reconstruction algorithms when dose was reduced. The shapes of the NPS curves provided additional value for future characterization of the image noise/texture features.

60 APPLIED LIFE SCIENCES↗

Associated Particle Imaging of Neutron Inelastic Scatter: 3-D Reconstruction, Capabilities, and Challenges

Associated particle imaging (API) offers unique advantages for 3-D imaging of neutron inelastic scatter, including single-view tomographic imaging and data acquisition when access is limited to only one side of the interrogated object. However, widespread adoption of neutron inelastic scatter imaging has been impeded by several inherent challenges, most prominently spatial resolution, self-attenuation, and statistical noise. Here, in this work, the capabilities and challenges of neutron inelastic scatter imaging are investigated. Instead of focusing on a single imaging application, we identify imaging principles that hold for various neutron inelastic scatter imaging techniques. The primary challenges for 3-D imaging are characterized. The inherent spatial resolution in the time-of-flight (TOF) dimension is derived based on the known system timing resolution and scan geometry. Three reconstruction algorithms are described and demonstrated, including the introduction of modern iterative reconstruction incorporating a physics-based system model. Simulation is leveraged to demonstrate imaging capability with varying coincidence count levels and system timing resolution. An example of measured data with both back-scatter and forward-scatter detector positioning is presented. System design characteristics and their effects on image quality are identified. The imaging framework presented in this article has the potential to facilitate growth of 3-D neutron inelastic scatter API by identifying applications that are a good match for the technique and by targeting system development resources toward the requirements of a specific imaging task.

Associated particle imaging (API)↗

Towards an improved LAI collection protocol via simulated field-based PAR sensing

In support of NASA’s next-generation spectrometer—the Hyperspectral Infrared Imager (HyspIRI)—we are working towards assessing sub-pixel vegetation structure from imaging spectroscopy data. Of particular interest is Leaf Area Index (LAI), which is an informative, yet notoriously challenging parameter to efficiently measure in situ. While photosynthetically-active radiation (PAR) sensors have been validated for measuring crop LAI, there is limited literature on the efficacy of PAR-based LAI measurement in the forest environment. This study (i) validates PAR-based LAI measurement in forest environments, and (ii) proposes a suitable collection protocol, which balances efficiency with measurement variation, e.g., due to sun flecks and various-sized canopy gaps. A synthetic PAR sensor model was developed in the Digital Imaging and Remote Sensing Image Generation (DIRSIG) model and used to validate LAI measurement based on first-principles and explicitly-known leaf geometry. Simulated collection parameters were adjusted to empirically identify optimal collection protocols. Furthermore, these collection protocols were then validated in the field by correlating PAR-based LAI measurement to the normalized difference vegetation index (NDVI) extracted from the “classic” Airborne Visible Infrared Imaging Spectrometer (AVIRIS-C) data (R 2 was 0.61). The results indicate that our proposed collecting protocol is suitable for measuring the LAI of sparse forest (LAI < 3–5 ( m 2 /m 2 )).

47 OTHER INSTRUMENTATION↗

Neural Posterior Estimation for Cataloging Astronomical Images with Spatially Varying Backgrounds and Point Spread Functions

Neural posterior estimation (NPE), a type of amortized variational inference, is a computationally efficient means of constructing probabilistic catalogs of light sources from astronomical images. To date, NPE has not been used to perform inference in models with spatially varying covariates. However, ground-based astronomical images exhibit spatially varying sky backgrounds and point spread functions (PSFs), and accounting for this variation is essential for constructing accurate catalogs of imaged light sources. In this work, we introduce a novel NPE-based cataloging method that trains an inference network with semisynthetic astronomical images generated using PSFs and backgrounds sampled from the Sloan Digital Sky Survey. In experiments with semisynthetic images, we evaluate the method on key cataloging tasks: light source detection, star/galaxy separation, and flux measurement. A “generalist” inference network—trained with diverse PSFs and backgrounds—performs as well as a “specialist” network even when both are evaluated on the specialist’s particular PSF/background combination. This result suggests that a single NPE network can generalize across spatial variations, eliminating the need for retraining on each observational condition.

astronomy image processing↗

Design and assessment of a novel SPECT system for desktop open-gantry imaging of small animals: A simulation study

Purpose: Given increasing efforts in biomedical research utilizing molecular imaging methods, development of dedicated high-performance small-animal SPECT systems has been growing rapidly in the last decade. In the present work, we propose and assess an alternative concept for SPECT imaging enabling desktop open-gantry imaging of small animals. Methods: The system, PERSPECT, consists of an imaging desk, with a set of tilted detector and pinhole collimator placed beneath it. The object to be imaged is simply placed on the desk. Monte Carlo (MC) and analytical simulations were utilized to accurately model and evaluate the proposed concept and design. Furthermore, a dedicated image reconstruction algorithm, finite-aperture-based circular projections (FABCP), was developed and validated for the system, enabling more accurate modeling of the system and higher quality reconstructed images. Image quality was quantified as a function of different tilt angles in the acquisition and number of iterations in the reconstruction algorithm. Furthermore, more complex phantoms including Derenzo, Defrise, and mouse whole body were simulated and studied. Results: The sensitivity of the PERSPECT was 207 cps/MBq. It was quantitatively demonstrated that for a tilt angle of 30°, comparable image qualities were obtained in terms of normalized squared error, contrast, uniformity, noise, and spatial resolution measurements, the latter at ∼0.6 mm. Furthermore, quantitative analyses demonstrated that 3 iterations of FABCP image reconstruction (16 subsets/iteration) led to optimally reconstructed images. Conclusions: The PERSPECT, using a novel imaging protocol, can achieve comparable image quality performance in comparison with a conventional pinhole SPECT with the same configuration. The dedicated FABCP algorithm, which was developed for reconstruction of data from the PERSPECT system, can produce high quality images for small-animal imaging via accurate modeling of the system as incorporated in the forward- and back-projection steps. Meanwhile, the developed MC model and the analytical simulator of the system can be applied for further studies on development and evaluation of the system.

60 APPLIED LIFE SCIENCES↗

TH-CD-207B-09: Task-Driven Fluence Field Modulation Design for Model-Based Iterative Reconstruction in CT

Purpose: There has been increasing interest in integrating fluence field modulation (FFM) devices with diagnostic CT scanners for dose reduction purposes. Conventional FFM strategies, however, are often either based on heuristics or the analysis of filtered-backprojection (FBP) performance. This work investigates a prospective task-driven optimization of FFM for model-based iterative reconstruction (MBIR) in order to improve imaging performance at the same total dose as conventional strategies. Methods: The task-driven optimization framework utilizes an ultra-low dose 3D scout as a patient-specific anatomical model and a mathematical formation of the imaging task. The MBIR method investigated is quadratically penalized-likelihood reconstruction. The FFM objective function uses detectability index, d’, computed as a function of the predicted spatial resolution and noise in the image. To optimize performance throughout the object, a maxi-min objective was adopted where the minimum d’ over multiple locations is maximized. To reduce the dimensionality of the problem, FFM is parameterized as a linear combination of 2D Gaussian basis functions over horizontal detector pixels and projection angles. The coefficients of these bases are found using the covariance matrix adaptation evolution strategy (CMA-ES) algorithm. The task-driven design was compared with three other strategies proposed for FBP reconstruction for a calcification cluster discrimination task in an abdomen phantom. Results: The task-driven optimization yielded FFM that was significantly different from those designed for FBP. Comparing all four strategies, the task-based design achieved the highest minimum d’ with an 8–48% improvement, consistent with the maxi-min objective. In addition, d’ was improved to a greater extent over a larger area within the entire phantom. Conclusion: Results from this investigation suggests the need to re-evaluate conventional FFM strategies for MBIR. The task-based optimization framework provides a promising approach that maximizes imaging performance under the same total dose constraint.

60 APPLIED LIFE SCIENCES↗

Predicting bulge to total luminosity ratio of galaxies using deep learning

ABSTRACT We present a deep learning model to predict the r-band bulge-to-total luminosity ratio (B/T) of nearby galaxies using their multiband JPEG images alone. Our Convolutional Neural Network (CNN) based regression model is trained on a large sample of galaxies with reliable decomposition into the bulge and disc components. The existing approaches to estimate the B/T ratio use galaxy light-profile modelling to find the best fit. This method is computationally expensive, prohibitively so for large samples of galaxies, and requires a significant amount of human intervention. Machine learning models have the potential to overcome these shortcomings. In our CNN model, for a test set of 20 000 galaxies, 85.7 per cent of the predicted B/T values have absolute error (AE) less than 0.1. We see further improvement to 87.5 per cent if, while testing, we only consider brighter galaxies (with r-band apparent magnitude <17) with no bright neighbours. Our model estimates the B/T ratio for the 20 000 test galaxies in less than a minute. This is a significant improvement in inference time from the conventional fitting pipelines, which manage around 2–3 estimates per minute. Thus, the proposed machine learning approach could potentially save a tremendous amount of time, effort, and computational resources while predicting B/T reliably, particularly in the era of next-generation sky surveys such as the Legacy Survey of Space and Time (LSST) and the Euclid sky survey which will produce extremely large samples of galaxies.

Grover, Harsh (ORCID:0000000321338142)↗

An efficient computational approach to model statistical correlations in photon counting x-ray detectors

Purpose: To introduce and evaluate an increment matrix approach (IMA) describing the signal statistics of energy-selective photon counting detectors including spatial–spectral correlations between energy bins of neighboring detector pixels. The importance of the occurring correlations for image-based material decomposition is studied. Methods: An IMA describing the counter increase patterns in a photon counting detector is proposed. This IMA has the potential to decrease the number of required random numbers compared to Monte Carlo simulations by pursuing an approach based on convolutions. To validate and demonstrate the IMA, an approximate semirealistic detector model is provided, simulating a photon counting detector in a simplified manner, e.g., by neglecting count rate-dependent effects. In this way, the spatial–spectral correlations on the detector level are obtained and fed into the IMA. The importance of these correlations in reconstructed energy bin images and the corresponding detector performance in image-based material decomposition is evaluated using a statistically optimal decomposition algorithm. Results: The results of IMA together with the semirealistic detector model were compared to other models and measurements using the spectral response and the energy bin sensitivity, finding a good agreement. Correlations between the different reconstructed energy bin images could be observed, and turned out to be of weak nature. These correlations were found to be not relevant in image-based material decomposition. An even simpler simulation procedure based on the energy bin sensitivity was tested instead and yielded similar results for the image-based material decomposition task, as long as the fact that one incident photon can increase multiple counters across neighboring detector pixels is taken into account. Conclusions: The IMA is computationally efficient as it required about 10{sup 2} random numbers per ray incident on a detector pixel instead of an estimated 10{sup 8} random numbers per ray as Monte Carlo approaches would need. The spatial–spectral correlations as described by IMA are not important for the studied image-based material decomposition task. Respecting the absolute photon counts and thus the multiple counter increases by a single x-ray photon, the same material decomposition performance could be obtained with a simpler detector description using the energy bin sensitivity.

60 APPLIED LIFE SCIENCES↗

Characterization of the atomic-level structure of γ-alumina and (111) Pt/γ-alumina interfaces

The atomic-level structure of platinum/γ-alumina interfaces is characterized in a model system of dense γ-alumina embedded with faceted Pt NPs produced by implantation of platinum ions into sapphire followed by thermal annealing in air at 800 °C. Aberration-corrected scanning transmission electron microscopy (STEM) was used to collect atomic-resolution images, which are compared to STEM image simulations of two experimentally-based bulk models of γ-alumina by Smrčok et al. and Zhou and Snyder. A density functional theory (DFT) based model of (111) interfaces with different chemical terminations (O, Al 1 , Al 2 ) of the γ-alumina developed by Oware Sarfo et al. is also compared to experimental STEM data from Pt/γ-alumina interfaces. Further, the Smrčok γ-alumina model provides a better fit than the Zhou structure to the bulk of the γ-alumina. The oxygen-terminated Oware Sarfo model best fits the experimental data and is a very good model close to the interface. However, the fit of the interface model to the experimental data is poorer beyond the third atomic layer in the γ-alumina. This is attributed to compromises required in the design of the model to limit the cell size and computational time for DFT calculations. Understanding the accuracy and limits of the structural models of γ-alumina and Pt/γ-alumina interfaces is important to further the understanding of the structure/property relationships in this system.

36 MATERIALS SCIENCE↗

The Radar Image Generation (RIG) model

RIG is a modeling system which creates synthetic aperture radar (SAR) and inverse SAR images from 3-D faceted data bases. RIG is based on a physical optics model and includes the effects of multiple reflections. Both conducting and dielectric surfaces can be modeled; each surface is labeled with a material code which is an index into a data base of electromagnetic properties. The inputs to the program include the radar processing parameters, the target orientation, the sensor velocity, and (for inverse SAR) the target angle rates. The current version of RIG can be run on any workstation, however, it is not a real-time model. We are considering several approaches to enable the program to generate realtime radar imagery. In addition to its image generation function, RIG can also generate radar cross-section (RCS) plots as well as range and doppler radar return profiles.

Stenger, Anthony J.↗

The Earth in Living Color - NASA’s Surface Biology and Geology Designated Observable

The Surface Biology and Geology (SBG) Designated Observable will transform our understanding of the global land surface, inland and coastal aquatic ecosystems through visible-to-shortwave infra-red imaging (VSWIR) spectroscopy and thermal infra-red (TIR) imaging. SBG is one of four high-priority observables recommended in the 2017 NASA Earth Science Decadal Survey t o address science questions on vegetation and aquatic ecosystem health, snow-cover dynamics, volcanic activity, and minerology. With a planned launch readiness date of 2028, SBG is currently in Pre-Phase A, with Level 1 requirements being developed for a two-spacecraft architecture, including an additional constellation pathfinder. The recommended architecture emerged from an extensive study (2018-2021) that engaged the research and applications community to consider the science questions and measurement objectives of the Decadal Survey. A Science and Applications Traceability Matrix was used as a basis for scoring candidate architectures, with inputs from four working groups that covered algorithms, applications, calibration and validation, and modeling. Two pathfinder studies, Modeling End-to-End Traceability in support of SBG (MEET-SBG) and Space-based Imaging Spectroscopy and Thermal pathfindER (SISTER) are providing pre-launch modeling tools and data for algorithm development to support science value trades. The architecture consists of one spacecraft hosting a wide-swath VSWIR imaging spectrometer providing 30-m ground-sample distance (GSD), a spectral range of 380-2500 nm (at 10 nm resolution), 16-day revisit with 400 signal-to-noise for VNIR and 250 for SWIR (at 25% reflectance). A separate spacecraft will host a wide swath thermal imager, with five to seven bands placed between 4-12 μm), with 60-m (GSD), 3- day revisit, and 0.2K noise-equivalent differential temperature (NeDT). A VNIR compact camera will be hosted on the TIR spacecraft to enable coincident TIR and VNIR observations. A constellation pathfinder will evaluate options for enabling VSWIR mission continuity using Small Sats or data buys. Partnerships with international space agencies contribute technology as well as improvements to temporal revisit. SBG, when launched, will be the first dedicated mission collecting the full spectra of the Earth’s ‘living color’ and will play a critical role in NASA’s Earth System Observatory.

David S Schimel↗

Orbital circularization of a planet accreting disk gas: the formation of distant jupiters in circular orbits based on a core accretion model

Recently, gas giant planets in nearly circular orbits with large semimajor axes (a ∼ 30-1000 AU) have been detected by direct imaging. We have investigated orbital evolution in a formation scenario for such planets, based on a core accretion model. (1) Icy cores accrete from planetesimals at ≲ 30 AU, (2) they are scattered outward by an emerging nearby gas giant to acquire highly eccentric orbits, and (3) their orbits are circularized through the accretion of disk gas in outer regions, where they spend most of their time. We analytically derived equations to describe the orbital circularization through gas accretion. Numerical integrations of these equations show that the eccentricity decreases by a factor of more than 5 while the planetary mass increases by a factor of 10. Because runaway gas accretion increases planetary mass by ∼10-300, the orbits are sufficiently circularized. On the other hand, a is reduced at most only by a factor of two, leaving the planets in the outer regions. If the relative velocity damping by shock is considered, the circularization slows down, but is still efficient enough. Therefore, this scenario potentially accounts for the formation of observed distant jupiters in nearly circular orbits. If the apocenter distances of the scattered cores are larger than the disk sizes, their a shrink to a quarter of the disk sizes; the a-distribution of distant giants could reflect the outer edges of the disks in a similar way that those of hot jupiters may reflect inner edges.

79 ASTRONOMY AND ASTROPHYSICS↗

INTERSTELLAR DUST PROPERTIES OF M51 FROM AKARI MID-INFRARED IMAGES

Using mid-infrared (MIR) images of four photometric bands of the Infrared Camera on board the AKARI satellite, S7 (7 μm), S11 (11 μm), L15 (15 μm), and L24 (24 μm), we investigate the interstellar dust properties of the nearby pair of galaxies M51 with respect to their spiral arm structure. The arm and interarm regions are defined based on a spatially filtered stellar component model image and we measure the arm/interarm contrast for each band. The contrast is lowest in the S11 image, which we interpret as meaning that among the four AKARI MIR bands, the S11 image best correlates with the spatial distribution of dust grains including colder components. On the other hand, the L24 image, with the highest contrast, traces warmer dust heated by star forming activity. The surface brightness ratio between the bands, i.e., color, is measured over the disk of the main galaxy, M51a, at 300 pc resolution. We find that the distribution of S7/S11 is smooth and traces the global spiral arm pattern well while L15/S11 and L24/S11 peak at individual H II regions. This result indicates that the ionization state of polycyclic aromatic hydrocarbons (PAHs) is related to the spiral structure. Comparison with observational data and dust models also supports the importance of the variation in the PAH ionization state within the M51a disk. However, the mechanism driving this variation is not yet clear from the currently available datasets. Another suggestion from the comparison with the models is that the PAH fraction in the total dust mass is higher than previously estimated.

79 ASTRONOMY AND ASTROPHYSICS↗