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All sourcesNASA NTRSDOE OSTI
DOE OSTI2022

Development, construction and qualification tests of the mechanical structures of the electromagnetic calorimeter of the Mu2e experiment at Fermilab

The “muon-to-electron conversion” (Mu2e) experiment at Fermilab will search for the Charged Lepton Flavour Violating neutrino-less coherent conversion of a muon into an electron in the field of an aluminum nucleus. The observation of this process would be the unambiguous evidence of physics beyond the Standard Model. Mu2e detectors comprise a straw-tracker, an electromagnetic calorimeter and an external veto for cosmic rays. The calorimeter provides excellent electron identification, complementary information to aid pattern recognition and track reconstruction, and a fast calorimetric online trigger. The detector has been designed as a state-of-the-art crystal calorimeter and employs 1340 pure Cesium Iodide (CsI) crystals readout by UV-extended silicon photosensors and fast front-end and digitization electronics. A design consisting of two identical annular matrices (named “disks”) positioned at the relative distance of 70 cm downstream the aluminum target along the muon beamline satisfies the Mu2e physics requirements.The hostile Mu2e operational conditions, in terms of radiation levels (total ionizing dose of 12 krad and a neutron fluence of 5x1010 n/cm2 @ 1 MeVeq (Si)/y), magnetic field intensity (1 T) and vacuum level (10$^{-4}$ Torr) have posed tight constraints on the design of the detector mechanical structures and materials choice. The support structure of the two 670 crystal matrices employs two aluminum hollow rings and parts made of open-cell vacuum-compatible carbon fiber. The photosensors and service front-end electronics for each crystal are assembled in a unique mechanical unit inserted in a machined copper holder. The 670 units are supported by a machined plate made of vacuum-compatible plastic material. The plate also integrates the cooling system made of a network of copper lines flowing a low temperature radiation-hard fluid and placed in thermal contact with the copper holders to constitute a low resistance thermal bridge. The data acquisition electronics is hosted in aluminum custom crates positioned on the external lateral surface of the two disks. The crates also integrate the electronics cooling system as lines running in parallel to the front-end system.The constraints on the calorimeter mechanical structures design, the development from the conceptual design to the specifications of all the structural components, the status of components production and the components quality assurance tests are presented.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
DOE OSTI2014

Forward Drift Chambers for the GlueX experiment

The GlueX experiment will search for exotic mesons produced by 9 GeV linearly polarized photon beam from the 12 GeV CEBAF machine. A hermetic solenoid-based detector system that includes tracking and calorimetry has been constructed. The Forward Drift Chamber (FDC) system consists of 24 circular planar drift chambers of 1 m diameter. Additional information from cathode strips, placed at both sides of the wire planes, is required to achieve efficient pattern recognition in the presence of high background rates in forward direction, resulting in 12,500 readout channels in total. The detection of relatively low energy photons by the electro-magnetic calorimeters imposes severe constraints on the amount of the material used in the FDC. Challenges in the production of this low-mass detector will be discussed. The FDC has been completed and recently installed in the bore of the solenoid magnet. Results from the tests of the whole detector system will be presented.

Pentchev, Lubomir↗
DOE OSTI2015

Genomic Patterns of Positive Selection at the Origin of Rust Fungi

Understanding the origin and evolution of pathogenicity and biotrophic life-style of rust fungi has remained a conundrum for decades. Research on the molecular mechanisms responsible for rust fungi evolution has been hampered by their biotrophic life-style until the sequencing of some rust fungi genomes. With the availability of multiple whole genomes and EST data for this group, it is now possible to employ genome-wide surveys and investigate how natural selection shaped their evolution. In this work, we employed a phylogenomics approach to search for positive selection and genes undergoing accelerated evolution at the origin of rust fungi on an assembly of single copy genes conserved across a broad range of basidiomycetes. Up to 985 genes were screened for positive selection on the phylogenetic branch leading to rusts, revealing a pervasive signal of positive selection throughout the data set with the proportion of positively selected genes ranging between 19.6–33.3%. Additionally, 30 genes were found to be under accelerated evolution at the origin of rust fungi, probably due to a mixture of positive selection and relaxation of purifying selection. Functional annotation of the positively selected genes revealed an enrichment in genes involved in the biosynthesis of secondary metabolites and several metabolism and transporter classes.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2022

Harnessing structural stochasticity in the computational discovery and design of microstructures

This paper presents a deep generative model-based design methodology for tailoring the structural stochasticity of microstructures. Although numerous methods have been established for designing deterministic (periodic) or stochastic microstructures, a systematic design approach that allows the unified treatment of both deterministic and stochastic microstructure design domains has yet to be created. The proposed methodology resolves this issue by learning a unified feature space that embodies diverse structural patterns with continuously varying stochasticity levels. A highly diverse microstructure database is established to incorporate various types of deterministic and stochastic microstructure patterns. A property-aware deep generative model is proposed to learn a unified feature space of the structural characteristics, as well as the relationship between structure features and properties of interest. Autoencoder (AE), Variational Autoencoder (VAE), and Adversarial Autoencoder (AAE) are compared to understand their relative merits in the property-aware learning of the unified feature space. Microstructural designs with tailorable stochasticity and properties are obtained by searching the unified feature space. Multiple design cases are presented to demonstrate the capability of designing microstructures for structural stochasticity and properties. Furthermore, the proposed method is employed to create stochastically graded structures, which manipulate the mechanical behaviors by varying the local stochasticity of the structure.

36 MATERIALS SCIENCE↗
DOE OSTI2011

A quaternary lead based perovskite structured materials with diffuse phase transition behavior

Graphical abstract: (a) Curie-Weiss plot for the inverse of the relative dielectric permittivity and (b) log (1/{epsilon} - 1/{epsilon}{sub m}) as function of log (T - T{sub m}) for ceramics at 1 kHz. Highlights: Black-Right-Pointing-Pointer Retaining phase pure structure with quaternary complex stoichiometric compositions. Black-Right-Pointing-Pointer P-E loops with good saturation polarization (P{sub s} {approx} 30.7 {mu}C/cm{sup 2}). Black-Right-Pointing-Pointer Diffused relaxor phase transition behavior with {gamma} estimated is {approx}1.65. -- Abstract: A lead based quaternary compound composed of 0.25(PbZr{sub 0.52}Ti{sub 0.48}O{sub 3}) + 0.25(PbFe{sub 0.5}Ta{sub 0.5}O{sub 3}) + 0.25 (PbF{sub 0.67}W{sub 0.33}O{sub 3}) + 0.25(PbFe{sub 0.5}Nb{sub 0.5}O{sub 3}) - (PZT-PFT-PFW-PFN) was synthesized by conventional solid-state reaction techniques. It showed moderate high dielectric constant, low dielectric loss, and two diffuse phase transitions, one below the room temperature {approx}261 K and other above {approx}410 K. X-ray diffraction (XRD) patterns revealed a tetragonal crystal structure at room temperature where as scanning electron micrograph (SEM) indicates inhomogeneous surface with an average grain size of 500 nm-3 {mu}m. Well saturated ferroelectric hysteresis loops with good saturation polarization (spontaneous polarization, P{sub s} {approx} 30.68 {mu}C/cm{sup 2}) were observed. Temperature-dependent ac conductivity displayed low conductivity with kink in spectra near the phase transition. In continuing search for developing new ferroelectric materials, in the present study we report stoichiometric compositions of complex perovskite ceramic materials: (PZT-PFT-PFW-PFN) with diffuse phase transition behavior. The crystal structure, dielectric properties, and ferroelectric properties were characterized by XRD, SEM, dielectric spectroscopy, and polarization. 1/{epsilon} versus (T) plots revealed diffuse relaxor phase transition (DPT) behavior. The compositional variation on the phase transition temperature, dielectric constant, and ferroelectric to paraelectric phase transitions are discussed.

36 MATERIALS SCIENCE↗
DOE OSTI2014

Interlaced crystals having a perfect Bravais lattice and complex chemical order revealed by real-space crystallography

The search for optimal thermoelectric materials aims for structures in which the crystalline order is disrupted to lower the thermal conductivity without degradation of the electron conductivity. Here we report the synthesis and characterization of ternary nanoparticles (two cations and one anion) that exhibit a new form of crystal-line order: an uninterrupted, perfect, global Bravais lattice, in which the two cations exhibit a wide array of distinct ordering patterns within the cation sublattice, form-ing interlaced domains and phases. Partitioning into domains and phases is not unique; the corresponding boundaries have no structural defects or strain and entail no energy cost. We call this form of crystalline order “interlaced crystals” and present the example of hexagonal-CuInS 2 . Interlacing is possible in multi-cation tetrahedral-ly-bonded compound with an average of two electrons per bond. Interlacing has min-imal effect on electronic properties, but should strongly reduce phonon transport, making interlaced crystals attractive for thermoelectric applications.

36 MATERIALS SCIENCE↗
DOE OSTI2013

SIGNATURES OF LONG-LIVED SPIRAL PATTERNS

Azimuthal age/color gradients across spiral arms are a signature of long-lived spirals. From a sample of 19 normal (or weakly barred) spirals where we have previously found azimuthal age/color gradient candidates, 13 objects were further selected if a two-armed grand-design pattern survived in a surface density stellar mass map. Mass maps were obtained from optical and near-infrared imaging, by comparison with a Monte Carlo library of stellar population synthesis models that allowed us to obtain the mass-to-light ratio in the J band, (M/L){sub J}, as a function of (g - i) versus (i - J) color. The selected spirals were analyzed with Fourier methods in search of other signatures of long-lived modes related to the gradients, such as the gradient divergence toward corotation, and the behavior of the phase angle of the two-armed spiral in different wavebands, as expected from theory. The results show additional signatures of long-lived spirals in at least 50% of the objects.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2021

The legacy of weapons grade plutonium production: Health status of Hanford complex workers who manage the waste

The extent and etiology of health effects in workers who maintain underground storage tanks at the Hanford Nuclear Reservation (Hanford) have been subjects of controversy and concern for several decades. Hanford is a decommissioned nuclear production complex managed by the US Department of Energy in southeast Washington State. This integration-of-evidence review evaluates the relationship between exposure to vapors from mixed chemical and radioactive waste stored in underground storage tanks at Hanford and worker health. Hanford workers’ health information was gathered from technical reports, media reports, and published literature, including the systematic search of seven databases. This review describes the health status and health concerns of Hanford tank farm workers based on the integration of the available health effects data from disparate sources. In interviews with external groups, Hanford workers reported both irritant-type symptoms and diseases that they believe are attributable to tank farm vapors. However, the results of this integration-of-evidence review indicated that no pervasive pattern of occupational disease was identified that can be associated with exposure to tank farm vapors. Inhalation exposure to asbestos and beryllium is associated with lung disease from various types of nuclear industry work but not from work on tank farms. This review concluded that while irritant-type symptoms and isolated cases of occupational disease are plausible under certain conditions, the currently available data do not support a pervasive pattern of occupational disease associated with vapor exposure.

Cherry, Debra↗
NASA NTRS1999

Candidate-Landing Sites and Backups for the Mars Surveyor Program in the Schiaparelli. Crater Region

Our Survey area comprises the Sinus Sabeus NW quadrangle that includes most of the Schiaparelli crater and part of the Arabia SW region (3 N to 15 S Lat.) and (0 to 337.5 W long.) and covers all regions that show a potential hydrogeological link with the Schiaparelli impact structure. This area is hereafter defined as the Schiaparelli Crater Region. The Schiaparelli crater region is one of the most documented MOC targets. Up to now, MGS MOC camera took two dozen images at an average of 5m/pxl resolution that not only provide an exceptional insight on the local geology and morphology, but give also key-elements to assess landing safety criteria. In addition, the MOLA topographic profile No. 23 passes through part of the crater basin allowing the adjustment of the elevation as previously known from the Viking mission (USGS I-2125, 1991). Beyond the Mars Polar Lander mission that will land next December, the future missions (2001 APEX, 2003, and 2005) are led by a series of science objectives and engineering constraints that must be considered in order to select landing sites that will fulfill the Surveyor Program's objectives. The search for a sound and safe candidate-site (without ending up with the usual "safe but boring" or "fascinating but too risky" site) is usually limited by the data available to the investigator, by the data accuracy (e.g. poor image resolution, poor altimetry), and the lack of crucial information for science and safety that can be derived from them. The Schiaparelli region provides an exception to this recurrent pattern. We listed the preliminary constraints for landing site selection identified for the Surveyor '01 mission, in terms of safety requirements and data needed and compared them against the existing information and/or data already available for the Schiaparelli region. The engineering constraints of '03 and '05 are not designated yet but, since they are also related to atmospheric density and Lander designs, we will assume that these points will be comparable to '01. The main difference will reside in the rover design, the Rocky-7 class rover being bigger than Marie Curie ('01) will be able to overcome bigger obstacles. We listed then the main objectives of the Surveyor Program and compared them with the potential offered by the Schiaparelli Crater Region to document them. Within the survey area, the Schiaparelli impact crater is 2.5 S/343.3 W (USGS 1-1376, MC-20 NW, 1981) and occupies a significant surface area. The crater has been proposed as a potential candidate-site in the past years. The purpose of this study is to show that, not only the Schiaparelli Crater would be a high-priority target, but that the region where it is located offer several very-high potential back-up sites, all within science and engineering constraints, that make this region probably the most promising candidate area so far.

Cabrol, Nathalie A.↗
DOE OSTI2016

Enabling Efficient and Confident Annotation of LC-MS Metabolomics Data through MS1 Spectrum and Time Prediction

Liquid chromatography coupled to electrospray ionization-mass spectrometry (LC–ESI-MS) is a versatile and robust platform for metabolomic analysis. However, while ESI is a soft ionization technique, in-source phenomena including multimerization, nonproton cation adduction, and in-source fragmentation complicate interpretation of MS data. Here, we report chromatographic and mass spectrometric behavior of 904 authentic standards collected under conditions identical to a typical nontargeted profiling experiment. The data illustrate that the often high level of complexity in MS spectra is likely to result in misinterpretation during the annotation phase of the experiment and a large overestimation of the number of compounds detected. However, our analysis of this MS spectral library data indicates that in-source phenomena are not random but depend at least in part on chemical structure. These nonrandom patterns enabled predictions to be made as to which in-source signals are likely to be observed for a given compound. Using the authentic standard spectra as a training set, we modeled the in-source phenomena for all compounds in the Human Metabolome Database to generate a theoretical in-source spectrum and retention time library. A novel spectral similarity matching platform was developed to facilitate efficient spectral searching for nontargeted profiling applications. Taken together, this collection of experimental spectral data, predictive modeling, and informatic tools enables more efficient, reliable, and transparent metabolite annotation.

60 APPLIED LIFE SCIENCES↗
NASA NTRS1974

On the local time dependence of the bow shock wave structure

In the first 6 months after its launch, Ogo 3 crossed the earth's bow shock over 500 times. From this group, a set of 494 shock crossings were chosen for analysis. These crossings, as they were recorded by the UCLA/JPL search coil magnetometer, were scanned and classified according to the nature of the plasma waves detected near the shock. More than 85% of the shocks detected fell into a single category showing the predominance of two independent wave trains near the shock, the higher frequency appearing upstream and the lower downstream. The other 15%, which constitute an upper limit, appear to be composed of shocks dominated by a single wave pattern and of chaotic shocks showing no orderly progression of wave frequencies as the shock was penetrated. This division of wave pattern was found to occur at all local times, that is, in all regions where the satellite penetrated the shock.

Olson, J. V.↗
DOE OSTI2012

Detection of suspicious mass on structures by acoustical waves

Analysis of scattered Lamb waves in thin plates and shells, with an added foreign mass on their surface, was performed. Waves were generated in a range of frequencies, up to 80 kHz, by an impact loading. The responses were detected by full-field and point-wise optical methods. Pulse holointerferometry and pulse electronic speckle patterns interferometry techniques were used to visualize the interaction of the Lamb waves with the added foreign mass. Double-channel laser vibrometry was used to record the velocity history within the proximity of the added foreign mass. It was shown that frequency analysis of the recorded waveforms was more convenient than time domain analysis when investigating the response in the thin-walled structures. The proposed method is applicable to search for suspicious masses (e.g. explosive devices) added to the structures.

46 INSTRUMENTATION RELATED TO NUCLEAR SCIENCE AND ↗
NASA NTRS2006

Suppression of Speckles at High Adaptive Correction Using Speckle Symmetry

Focal-plane speckles set important sensitivity limits on ground- or space-based imagers and coronagraphs that may be used to search for faint companions, perhaps ultimately including exoplanets, around stars. As speckles vary with atmospheric fluctuations or with drifting beamtrain aberrations, they contribute speckle noise proportional to their full amplitude. Schemes to suppress speckles are thus of great interest. At high adaptive correction, speckles organize into species, represented by algebraic terms in the expansion of the phase exponential, that have distinct spatial symmetry, even or odd, under spatial inversion. Filtering speckle patterns by symmetry may eliminate a disproportionate fraction of the speckle noise while blocking (only) half of the image signal from the off-axis companion being sought. The fraction of speckle power and hence of speckle noise in each term will vary with degree of correction, and so also will the net symmetry in the speckle pattern.

atmospheric turbulence↗
DOE OSTI2023

Cosmic topology. Part I. Limits on orientable Euclidean manifolds from circle searches

The Einstein field equations of general relativity constrain the local curvature at every point in spacetime, but say nothing about the global topology of the Universe. Cosmic microwave background anisotropies have proven to be the most powerful probe of non-trivial topology since, within ΛCDM, these anisotropies have well-characterized statistical properties, the signal is principally from a thin spherical shell centered on the observer (the last scattering surface), and space-based observations nearly cover the full sky. The most generic signature of cosmic topology in the microwave background is pairs of circles with matching temperature and polarization patterns. No such circle pairs have been seen above noise in the WMAP or Planck temperature data, implying that the shortest non-contractible loop around the Universe through our location is longer than 98.5% of the comoving diameter of the last scattering surface. We translate this generic constraint into limits on the parameters that characterize manifolds with each of the nine possible non-trivial orientable Euclidean topologies, and provide a code which computes these constraints. In all but the simplest cases, the shortest non-contractible loop in the space can avoid us, and be shorter than the diameter of the last scattering surface by a factor ranging from 2 to at least 6. Further, this result implies that a broader range of manifolds is observationally allowed than widely appreciated. Probing these manifolds will require more subtle statistical signatures than matched circles, such as off-diagonal correlations of harmonic coefficients.

79 ASTRONOMY AND ASTROPHYSICS↗
DOE OSTI2015

Structure and proposed mechanism of α-glycerophosphate oxidase from Mycoplasma pneumoniae

In this study, the formation of hydrogen peroxide (H₂O₂) by the FAD-dependent α-glycerophosphate oxidase (GlpO), is important for the pathogenesis of Streptococcus pneumoniae and Mycoplasma pneumoniae . The structurally known GlpO from Streptococcus sp. ( Ssp GlpO) is similar to the pneumococcal protein ( Sp GlpO) and provides a guide for drug design against that target. However, M. pneumoniae GlpO ( Mp GlpO), having <20% sequence identity with structurally known GlpOs, appears to represent a second type of GlpO we designate as Type II GlpOs. Here, the recombinant His-tagged Mp GlpO structure is described at ~2.5 Å resolution, solved by molecular replacement using as a search model the Bordetella pertussis protein 3253 (Bp3253) a protein of unknown function solved by structural genomics efforts. Recombinant Mp GlpO is an active oxidase with a turnover number of ~580 min⁻¹ while Bp3253 showed no GlpO activity. No substantial differences exist between the oxidized and dithionite-reduced Mp GlpO structures. Although, no liganded structures were determined, a comparison with the tartrate-bound Bp3253 structure and consideration of residue conservation patterns guided the construction of a model for α-glycerophosphate (Glp) recognition and turnover by Mp GlpO. The predicted binding mode also appears relevant for the type I GlpOs (such as Ssp GlpO) despite differences in substrate recognition residues, and it implicates a histidine conserved in type I and II Glp oxidases and dehydrogenases as the catalytic acid/base. This work provides a solid foundation for guiding further studies of the mitochondrial Glp dehydrogenases as well as for continued studies of M. pneumoniae and S. pneumoniae glycerol metabolism and the development of novel therapeutics targeting Mp GlpO and Sp GlpO.

59 BASIC BIOLOGICAL SCIENCES↗
DOE OSTI2018

Advanced Data Structures for Improved Cyber Resilience and Awareness in Untrusted Environments: LDRD Report

This report summarizes the work performed under the project "Advanced Data Structures for Improved Cyber Resilience and Awareness in Untrusted Environments." The goal of the project was to design, analyze, and test new data structures for cybersecurity applications. We had two major thrusts: 1) using new/improved write-optimized data structures and/or algorithms to better man- age and analyze high-speed massive-volume cyberstreams, and 2) adding security features to data structures at minimum cost. Write optimization allows data structures to better use secondary memory to store and search a larger amount of useful information. Secondary memory is large compared to main memory, but data movement to and from secondary memory must be carefully managed to run quickly enough to keep up with fast streams. The first thrust included managing cyberstreams in parallel, both multi-threaded and distributed, and improving the benchmarking infrastructure for testing new streaming data structures. We considered both (near) real-time discovery of particular patterns, and improved logging for improved forensics. We considered two kinds of security-feature problem. The first was high-performance history- independent external-memory data structures. These provide certain protections to data if a disk is stolen. We also prove some trade-offs between speed and security in this setting. The second data-security problem is more secure data look-up in secret-shared data bases. This report summarizes the project's major accomplishments, with the background to under- stand these accomplishments. It gathers the abstracts and references for the six refereed publications that have appeared as part of this work. We summarize several accomplishments that will be submitted for publication. We then archive one piece of partial work that is not likely to be published in the near future: validation of history-independent data structure implementations.

97 MATHEMATICS AND COMPUTING↗
NASA NTRSDate not supplied

ASDC Distribution and Services of TEMPO Data

The Tropospheric Emissions: Monitoring of POllution (TEMPO) instrument represents a groundbreaking advancement in remote sensing technology, providing real-time and high-resolution measurements of atmospheric pollutants and air quality monitoring. This presentation will highlight the significance of TEMPO and its data distribution by NASA’s Atmospheric Science Data Center (ASDC) to facilitate the analyses by the research and end user communities. TEMPO's geostationary orbit allows for continuous and high-resolution measurements of key atmospheric pollutants, including nitrogen dioxide (NO 2 ), ozone (O 3 ), and formaldehyde (HCHO). As a result, researchers can investigate the distribution patterns of these pollutants on an hourly basis, providing valuable information for understanding regional and temporal variations in air quality. Furthermore, this presentation will highlight the usability of TEMPO data in complementing ground-based air quality monitoring networks. ASDC distribution services and tools facilitate efficient data handling and analysis to support research and application uses of TEMPO data. As part of NASA’s Earthdata ecosystem, TEMPO will be available through Earthdata Search and Worldview, as well as have variable and spatial subsetting capabilities. This presentation will provide an overview of data access and services available for TEMPO data.

Hazem Mahmoud↗
DOE OSTI2015

Potential sterile neutrino search utilizing spectral distortion in a two-reactor/one-detector configuration

There is an observed deficit of about 6% in the expected rate of anti-neutrino interactions when averaging over many different reactor experiments. While the significance of the deficit is low (98.6 % CL), there is speculation that a non-interacting “sterile” neutrino could be the cause. Here, we explore the possibility of a two-reactor/one-detector experiment at intermediate distances (100-500 meters) to look for a sterile neutrino in the mass range implied by this deficit. A method for probing Δm 2 phase space is developed using interference patterns between two oscillated spectra at different baselines. This method is used to investigate the potential sensitivity of the Double Chooz experiment, which has a single Near Detector at distances of 351 m and 465 m from two reactors of identical design. We conclude that Double Chooz could investigate sterile neutrino in the Δm 2 range of 0.002 to 0.5 eV 2 over 5 years of near detector running.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗