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At least 523 records · Page 29

Estimation of Terrestrial Global Gross Primary Production (GPP) with Satellite Data-Driven Models and Eddy Covariance Flux Data

We estimate global terrestrial gross primary production (GPP) based on models that use satellite data within a simplified light-use efficiency framework that does not rely upon other meteorological inputs. Satellite-based geometry-adjusted reflectances are from the MODerate-resolution Imaging Spectroradiometer (MODIS) and provide information about vegetation structure and chlorophyll content at both high temporal (daily to monthly) and spatial (1 km) resolution. We use satellite-derived solar-induced fluorescence (SIF) to identify regions of high productivity crops and also evaluate the use of downscaled SIF to estimate GPP. We calibrate a set of our satellite-based models with GPP estimates from a subset of distributed eddy covariance flux towers (FLUXNET 2015). The results of the trained models are evaluated using an independent subset of FLUXNET 2015 GPP data. We show that variations in light-use efficiency (LUE) with incident PAR are important and can be easily incorporated into the models. Unlike many LUE-based models, our satellite-based GPP estimates do not use an explicit parameterization of LUE that reduces its value from the potential maximum under limiting conditions such as temperature and water stress. Even without the parameterized downward regulation, our simplified models are shown to perform as well as or better than state-of-the-art satellite data-driven products that incorporate such parameterizations. A significant fraction of both spatial and temporal variability in GPP across plant functional types can be accounted for using our satellite-based models. Our results provide an annual GPP value of 140 Pg C year 1 for 2007 that is within the range of a compilation of observation-based, model, and hybrid results, but is higher than some previous satellite observation-based estimates

CO2↗

Synergistic Use of SMAP and OCO-2 Data in Assessing the Responses of Ecosystem Productivity to the 2018 U.S. Drought

Soil moisture and gross primary productivity (GPP) estimates from the Soil Moisture Active Passive (SMAP) and solar-induced chlorophyll fluorescence (SIF) from the Orbiting Carbon Observatory-2 (OCO-2) provide new opportunities for understanding the relationship between soil moisture and terrestrial photosynthesis over large regions. Here we explored the potential of the synergistic use of SMAP and OCO-2 based data for monitoring the responses of ecosystem productivity to drought. We used complementary observational information on root-zone soil moisture and GPP (9 km) from SMAP and fine-resolution SIF (0.05°; GOSIF) derived from OCO-2 SIF soundings. We compared the spatial pattern and temporal evolution of anomalies of these variables over the conterminous U.S. during the 2018 drought, and examined to what extent they could characterize the drought-induced variations of flux tower GPP and crop yield data. Our results showed that SMAP GPP and GOSIF could well capture the spatial extent and dynamics of drought indicated by the U.S. Drought Monitor maps and the SMAP root-zone soil moisture deficit. Over the U.S. Southwest, monthly anomalies of soil moisture showed significant positive correlations with those of SMAP GPP (R2=0.44, p<0.001) and GOSIF (R2=0.76, p<0.001), demonstrating strong water availability constraints on plant productivity across dryland ecosystems. We further found that SMAP GPP and GOSIF captured the impact of drought on tower GPP and crop yield. Our results suggest that synergistic use of SMAP and OCO-2 data products can reveal the drought evolution and its impact on ecosystem productivity and carbon uptake at multiple spatial and temporal scales, and demonstrate the value of SMAP and OCO-2 for studying ecosystem function, carbon cycling, and climate change.

Soil Moisture Active Passive↗

Differences Between OCO‐2 and GOME‐2 SIF Products From a Model‐Data Fusion Perspective

Space-borne retrievals of solar-induced chlorophyll fluorescence (SIF) over land surfaces have recently become a resource for studying and quantifying the broad scale dynamics of gross carbon uptake (gross primary productivity—GPP) across ecosystems. To prepare for the assimilation of SIF data in terrestrial biosphere models, we examine how differences between SIF products (due to differences in acquisition characteristics and processing chain) may affect the optimization of model parameters and the resultant GPP estimate. We compare recent daily mean SIF products (one from the Orbiting Carbon Observatory-2 [OCO-2] and two from the Global Ozone Monitoring Experiment–2 [GOME-2], GlobFluo [GF] and NASA-v28 [N28], missions), averaged at 0.5° × 0.5° spatial resolution and 16-day temporal resolution, at the biome level. Phase differences between these products are relatively small. A first-order correction of the difference in spectral sampling between the two instruments shows that OCO-2 and N28 are consistent in terms of magnitude and amplitude, while GF is twice as large as the others. Using a bias-blind toy data assimilation framework, we analyze how biases between SIF products, and between model and products, can be partially alleviated by optimizing the slope and intercept parameters of a linear GPP-SIF operator. As observation biases can transfer to biases in other optimized process-based parameters and to modeled carbon fluxes— thereby resulting in unidentified inaccurate parameter values—we argue that potential SIF biases should be treated cautiously in real-world experiments in order to achieve realistic and reliable future simulations.

Gross primary production↗

Satellite Ocean Colour: Current Status and Future Perspective

Spectrally resolved water-leaving radiances (ocean colour) and inferred chlorophyll concentration are key to studying phytoplankton dynamics at seasonal and inter-annual scales, for a better understanding of the role of phytoplankton in marine biogeochemistry; the global carbon cycle; and the response of marine ecosystems to climate variability, change and feedback processes. Ocean colour data also have a critical role in operational observation systems monitoring coastal eutrophication, harmful algal blooms, and sediment plumes. The contiguous ocean-colour record reached 21 years in 2018; however, it is comprised of a number of one-off missions such that creating a consistent time-series of ocean-colour data requires merging of the individual sensors (including MERIS, Aqua-MODIS, SeaWiFS, VIIRS, and OLCI) with differing sensor characteristics, without introducing artefacts. By contrast, the next decade will see consistent observations from operational ocean colour series with sensors of similar design and with a replacement strategy. Also, by 2029 the record will start to be of sufficient duration to discriminate climate change impacts from natural variability, at least in some regions. This paper describes the current status and future prospects in the field of ocean colour focusing on large to medium resolution observations of oceans and coastal seas. It reviews the user requirements in terms of products and uncertainty characteristics and then describes features of current and future satellite ocean-colour sensors, both operational and innovative. The key role of in situ validation and calibration is highlighted as are ground segments that process the data received from the ocean-colour sensors and deliver analysis-ready products to end-users. Example applications of the ocean-colour data are presented, focusing on the climate data record and operational applications including water quality and assimilation into numerical models. Current capacity building and training activities pertinent to ocean colour are described and finally a summary of future perspectives is provided.

ocean colour↗

River streamflow, remotely-sensed water quality, and benthic composition of previously undescribed nearshore coral reefs in northern Puerto Rico

Land-based sediment stress represents a threat to many coral reefs in Puerto Rico primarily as a result of unrestricted land cover/land use changes and poor best management practices. The effects of such stresses have been documented along most coasts around the island. However, little attention has been paid to reefs located on the north coast, and very little is known about their composition and current state. Here, we present a study characterizing riverine inputs, water quality conditions, and benthic composition of two previously undescribed coral reefs (Tómbolo and Machuca reefs) located just eastward of the Río Grande de Manatí outlet in north-central Puerto Rico. This study utilizes a time series of remotely sensed ocean color products (diffuse vertical attenuation coefficient at 490 nm [Kd490] and chlorophyll-a concentration [Chl-a] estimated with data from the Visible Infrared Imaging Radiometer Suite [VIIRS]) to characterize water quality in this coastal region. In general, the months with relatively high mean daily river streamflow also coincide with months having the highest proportion of eastward wave direction, which can promote the eastward influence of river waters towards the two coral reefs sites. Kd490 and Chl-a showed a higher riverine influence closer to the watershed outlet. Kd490 and Chl-a monthly peaks also coincide with river streamflow highs, particularly at those pixels closer to shore. Tómbolo Reef, located farther eastward of the river outlet, shows a well-developed primary reef framework mainly composed of threatened reef-building species (Acropora palmata, Pseudodiploria) and high coral cover (19-51%). The benthos of Machuca Reef, located closer to the river outlet, is dominated by macroalgae with a significantly lower coral cover (0.2-2.7%) mainly composed of “weedy” coral species (Porites astroides, and S. radians). Cover of major benthic components correlates with distance from the river outlet, and with gradients in Kd490 and Chl-a, with higher coral cover and lower macroalgal cover farther from the river outlet. Coral cover at Tómbolo Reef is higher than what has been reported for similar sites around Puerto Rico and other Caribbean islands showing its ecological importance and, as up until now, an unrecognized potential refuge of reef-building threatened coral species.

benthic cover↗

Southern California Health & Air Quality: Using Remote Sensing to Detect the Frequency and Drivers of Red Tide Blooms in California to Assist in the Management of Human and Marine Exposure to Algal Toxins

In 2020, the dinoflagellate species Lingulodinium polyedra was measured at unprecedented levels off the southern California coast, raising concern for local communities. At high levels, L. polyedra can cause marine life mortality, food-borne illness, and respiratory-related health risks in humans. In partnership with the California Office of Environmental Health Hazard Assessment, the National Oceanic and Atmospheric Administration Southwest Fisheries Science Center, the California Department of Public Health, and the University of California San Diego’s Scripps Institution of Oceanography, this project utilized satellite imagery to visualize and analyze spatiotemporal trends of historical red tide events associated with L. polyedra. Using the Suomi National Polar-orbiting Partnership’s (NPP) Visible Infrared Imaging Radiometer Suite (VIIRS), Aqua’s Moderate Resolution Imaging Spectroradiometer (MODIS), and Global Change Observation Mission – Climate (GCOM-C) Second Generation Global Imager (SGLI), the team assessed the validity of using multiple sensors in detecting chlorophyll-a as a proxy for dinoflagellate dominated-algal blooms. The results suggest that VIIRS imagery processed using the Color Index algorithm from Hu et al. (2013), amongst all other algorithms and Earth observations assessed, shows the most promise in identifying L. polyedra blooms. The end products included an ArcGIS Dashboard and Google Earth Engine tool that when combined, provided users with spatial and temporal trends, interactive interfaces to analyze the effectiveness of various sensors and algorithms, and an overall contribution to aid in the management of human health and the economy impacted by harmful algal blooms.

Harmful algal bloom↗

Simulated Inherent Optical Properties of Aquatic Particles Using the Equivalent Algal Populations (EAP) Model

Paired measurements of phytoplankton absorption and backscatter, the inherent optical properties central to the interpretation of ocean colour remote sensing data, are notoriously rare. We present a dataset of Chlorophyll a (Chl a) -specific phytoplankton absorption, scatter and backscatter for 17 different phytoplankton groups, derived from first principles using measured in vivo pigment absorption and a well-validated semi-analytical coated sphere model which simulates the full suite of biophysically consistent phytoplankton optical properties. The optical properties of each simulated phytoplankton cell are integrated over an entire size distribution and are provided at high spectral resolution. The model code is additionally included to enable user access to the complete set of wavelength-dependent, angularly resolved volume scattering functions. This optically coherent dataset of hyperspectral optical properties for a set of globally significant phytoplankton groups has potential for use in algorithm development towards the optimal exploitation of the new age of hyperspectral satellite radiometry.

Equivalent Algal Populations↗

Machine learning based noise reduction for satellite products: application to solar-induced fluorescence retrievals using simulated and real data

In the past two decades, global satellite measurements of terrestrial chlorophyll solar-induced fluorescence (SIF) have been used widely for a number of different applications related to physiology, phenology, and productivity of plants. However, SIF retrievals are inherently noisy due to the relatively small SIF spectral signature in comparison with observational noise. In this work, we examine how a spectral-based approach that employs principal component analysis along with a relatively shallow artificial neural network can be used to reduce noise and other artifacts in satellite level 2 (L2) products. We first apply the approach in a controlled environment in which radiance spectra are simulated with a full atmospheric and surface radiative transfer model for different scenarios including various SIF values that are known. Various levels of noise can be added to the simulated spectra. Resulting noisy and noise-reduced SIF retrievals are compared with the true values to assess performance. We then apply the noise reduction approach to real SIF derived from instruments flying on meteorological satellites. The results are evaluated by comparing SIF retrievals from different platforms with each other and with other independent data sets, showing enhanced capability to capture seasonal and interannual variability in SIF.

Chlorophyll fluorescence↗

Expanded Signal to Noise Ratio Estimates for Validating Next-Generation Satellite Sensors in Oceanic, Coastal, and Inland Waters

The launch of the NASA Plankton, Aerosol, Cloud, ocean Ecosystem (PACE) and the Surface Biology and Geology (SBG) satellite sensors will provide increased spectral resolution compared to existing platforms. These new sensors will require robust calibration and validation datasets, but existing field-based instrumentation is limited in its availability and potential for geographic coverage, particularly for coastal and inland waters, where optical complexity is substantially greater than in the open ocean. The minimum signal-to-noise ratio (SNR) is an important metric for assessing the reliability of derived biogeochemical products and their subsequent use as proxies, such as for biomass, in aquatic systems. The SNR can provide insight into whether legacy sensors can be used for algorithm development as well as calibration and validation activities for next-generation platforms. We extend our previous evaluation of SNR and associated uncertainties for representative coastal and inland targets to include the imaging sensors PRISM and AVIRIS-NG, the airborne-deployed C-AIR radiometers, and the shipboard HydroRad and HyperSAS radiometers, which were not included in the original analysis. Nearly all the assessed hyperspectral sensors fail to meet proposed criteria for SNR or uncertainty in remote sensing reflectance (R rs ) for some part of the spectrum, with the most common failures (>20% uncertainty) below 400 nm, but all the sensors were below the proposed 17.5% uncertainty for derived chlorophyll-a. Instrument suites for both in-water and airborne platforms that are capable of exceeding all the proposed thresholds for SNR and R rs uncertainty are commercially available. Thus, there is a straightforward path to obtaining calibration and validation data for current and next-generation sensors, but the availability of suitable high spectral resolution sensors is limited.

signal-to-noise ratio↗

Aggregation of metallochlorophylls - Examination by spectroscopy

Nuclear magnetic resonance measurements determine which metallochlorophylls, besides magnesium-containing chlorophylls, possess coordination aggregation properties. Infrared spectroscopy reveals that only zinc pheophytin and zinc methyl pheophorbide showed significant coordination aggregation, whereas divalent nickel and copper did not.

Boucher, L. J.↗

Airborne Fraunhofer Line Discriminator

Airborne Fraunhofer Line Discriminator enables prospecting for fluorescent materials, hydrography with fluorescent dyes, and plant studies based on fluorescence of chlorophyll. Optical unit design is the coincidence of Fraunhofer lines in the solar spectrum occurring at the characteristic wavelengths of some fluorescent materials.

Gabriel, F. C.↗

Relationship between vegetation reflectance spectra and soil geochemistry: New data from Catheart Mountain, Maine

Spectral reflectance curves for red spruce and balsam fir in the 350- to 1100-nanometer region showed differences between specimens growing over and away from a concealed copper deposit at Catheart Mountain, Maine. A sample group of 15 anomalous spruce, 9 background spruce, 10 anomalous fir, and 10 background fir was studied. Measurements of copper and molybdenum contents in the supporting soil were used to categorize the trees as anomalous or background. Analyses using parametric and nonparametric statistical tests were performed to establish whether significant differences existed between the anomalous and background groups. At the 95% confidence level, significant differences were found to exist for both species, generally in the chlorophyll band centered at about 550 nanometers and in the region from 700 to 900 nanometers.

Canney, F. C.↗

On the use of a single blue band in oceanography

The selection of a single blue band to quantitatively measure ocean chlorophyll is dependent upon the altitude and spectral bandwidth of the filter. These relationships are discussed, and the conclusion made that a blue band from 0.44 to 0.50 microns would best serve this oceanographic application.

Sherman, J. W., III↗