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At least 55 records · Page 3

Numerical methods and hypoexponential approximations for gamma distributed delay differential equations

Abstract Gamma distributed delay differential equations (DDEs) arise naturally in many modelling applications. However, appropriate numerical methods for generic gamma distributed DDEs have not previously been implemented. Modellers have therefore resorted to approximating the gamma distribution with an Erlang distribution and using the linear chain technique to derive an equivalent system of ordinary differential equations (ODEs). In this work, we address the lack of appropriate numerical tools for gamma distributed DDEs in two ways. First, we develop a functional continuous Runge–Kutta (FCRK) method to numerically integrate the gamma distributed DDE without resorting to Erlang approximation. We prove the fourth-order convergence of the FCRK method and perform numerical tests to demonstrate the accuracy of the new numerical method. Nevertheless, FCRK methods for infinite delay DDEs are not widely available in existing scientific software packages. As an alternative approach to solving gamma distributed DDEs, we also derive a hypoexponential approximation of the gamma distributed DDE. This hypoexponential approach is a more accurate approximation of the true gamma distributed DDE than the common Erlang approximation but, like the Erlang approximation, can be formulated as a system of ODEs and solved numerically using standard ODE software. Using our FCRK method to provide reference solutions, we show that the common Erlang approximation may produce solutions that are qualitatively different from the underlying gamma distributed DDE. However, the proposed hypoexponential approximations do not have this limitation. Finally, we apply our hypoexponential approximations to perform statistical inference on synthetic epidemiological data to illustrate the utility of the hypoexponential approximation.

97 MATHEMATICS AND COMPUTING↗

Magnetic Properties of Carbon Co-Doped (Zn,Mn)O Using LDA and LDA-SIC Approximations

In this paper, we used the ab-initio calculations, based on the Korringa-Kohn-Rostoker (KKR) method combined with the coherent potential approximation (CPA), to simulate the magnetic properties of ZnO, doped and co-doped with manganese and carbon, respectively. For this purpose, we have used two different approximations: the Local Density Approximation (LDA) and the Local Density Approximation-Self-Interaction Correction (LDA-SIC). Numerical results are presented for the compound Zn{sub 1 − 0.06}Mn{sub 0.06}O{sub 1−x}C{sub x} when doping and co-doping is performed with Mn and C as doping elements. Total and partial DOSs are given for different concentrations using the two approximations, LDA and LDA-SIC. It is found that for 6% with doping by Mn the system becomes magnetic. The co-doping with carbon changes the behavior of the system : it becomes also magnetic for 4, 6 and 10% concentrations within both, LDA and LDA-SIC approximations. Furthermore, we have discussed the type of mechanism of exchange interaction and found that the double exchange is responsible for the appearing magnetism in the system, within the LDA and p-d interaction for LDA-SIC approximation. For 10% of carbon, we have found that the critical temperature approaches 280 K in the LDA approximation solely; and is about 305 K in the LDA-SIC approximation.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Hierarchical off-diagonal low-rank approximation of Hessians in inverse problems, with application to ice sheet model initialization

Obtaining lightweight and accurate approximations of discretized objective functional Hessians in inverse problems governed by partial differential equations (PDEs) is essential to make both deterministic and Bayesian statistical large-scale inverse problems computationally tractable. The cubic computational complexity of dense linear algebraic tasks, such as Cholesky factorization, that provide a means to sample Gaussian distributions and determine solutions of Newton linear systems is a computational bottleneck at large-scale. These tasks can be reduced to log-linear complexity by utilizing hierarchical off-diagonal low-rank (HODLR) matrix approximations. In this work, we show that a class of Hessians that arise from inverse problems governed by PDEs are well approximated by the HODLR matrix format. In particular, we study inverse problems governed by PDEs that model the instantaneous viscous flow of ice sheets. In these problems, we seek a spatially distributed basal sliding parameter field such that the flow predicted by the ice sheet model is consistent with ice sheet surface velocity observations. Here, we demonstrate the use of HODLR Hessian approximation to efficiently sample the Laplace approximation of the posterior distribution with covariance further approximated by HODLR matrix compression. Computational studies are performed which illustrate ice sheet problem regimes for which the Gauss–Newton data-misfit Hessian is more efficiently approximated by the HODLR matrix format than the low-rank (LR) format. We then demonstrate that HODLR approximations can be favorable, when compared to global LR approximations, for large-scale problems by studying the data-misfit Hessian associated with inverse problems governed by the first-order Stokes flow model on the Humboldt glacier and Greenland ice sheet.

97 MATHEMATICS AND COMPUTING↗

A new method approximating offset curve by Bézier curve using parallel derivative curves

In this paper, we present a new method for the offset approximation of an n-th degree Bézier curve by an n+1-th degree Bézier curve using parallel derivative curves. Our method is based on the Gauss map approximation of the n-th degree Bézier curve by the n+1-th degree Bézier curve whose derivative curve is parallel to that of the n-th degree Bézier curve. Thus, the convolution of the Gauss map approximation curve and n-th Bézier curve is a polynomial of degree n+1, which is our offset approximation of the n-th degree Bézier curve. Our approximation method has two advantages. One is that the offset approximation method yields a non-rational (polynomial) curve which is obtained by the simple sum of two Bézier curves. The other is that the offset approximation curve satisfying the endpoint interpolation of the given offset curve automatically has the same tangent lines as the offset curve at both endpoints. We illustrate our offset approximation method with some numerical examples.

97 MATHEMATICS AND COMPUTING↗

Analysis of diagonal G and subspace W approximations within fully self-consistent GW calculations for bulk semiconducting systems

Fully self-consistent GW (sc-GW) methods are now available to evaluate quasiparticle and spectral properties of various molecular and bulk systems. However, such techniques based on the full matrix of G and W are computationally demanding. Additionally, the routinely used single-shot GW approximation (G 0 W 0 ) has an undesirable dependency on the choice of initial exchange-correlation functional. In the literature, many so-called self-consistent GW methods are based on diagonal approximation of G and low-ranking approximation of W. It is thus worth checking how good such approximations are in comparison with the full matrix method. In this work, we consider AlAs, AlP, GaP, and ZnS as the prototype systems to perform sc-GW calculations by expressing the full G matrix using a plane-wave basis set. We compared our sc-GW results with the diagonal G and subspace W approximated sc-GW results (sc-GW-diagG and sc-GW-subW methods). In the sc-GW-diagG method, interacting G is expanded in the eigenvectors of noninteracting G such that only diagonal elements are retained, whereas the number of eigenmodes is truncated in sc-GW-subW calculations. A systematic analysis of the results obtained from the above techniques is presented. The differences in the quasiparticle band gap between the approximated and the full matrix sc-GW approaches are mostly less than 1.7%, which validates such widely adopted approximations, and also shows how such low-ranking approximation can be used to include higher-order terms such as the vertex correction.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Noise-Resilient and Reduced Depth Approximate Adders for NISQ Quantum Computing

The "Noisy intermediate-scale quantum" NISQ machine era primarily focuses on mitigating noise, controlling errors, and executing high-fidelity operations, hence requiring shallow circuit depth and noise robustness. Approximate computing is a novel computing paradigm that produces imprecise results by relaxing the need for fully precise output for error-tolerant applications including multimedia, data mining, and image processing. We investigate how approximate computing can improve the noise resilience of quantum adder circuits in NISQ quantum computing. We propose five designs of approximate quantum adders to reduce depth while making them noise-resilient, in which three designs are with carryout, while two are without carryout. We have used novel design approaches that include approximating the Sum only from the inputs (pass-through designs) and having zero depth, as they need no quantum gates. The second design style uses a single CNOT gate to approximate the SUM with a constant depth of O(1). We performed our experimentation on IBM Qiskit on noise models including thermal, depolarizing, amplitude damping, phase damping, and bitflip: (i) Compared to exact quantum ripple carry adder without carryout the proposed approximate adders without carryout have improved fidelity ranging from 8.34% to 219.22%, and (ii) Compared to exact quantum ripple carry adder with carryout the proposed approximate adders with carryout have improved fidelity ranging from 8.23% to 371%. Further, the proposed approximate quantum adders are evaluated in terms of various error metrics.

Gaur, Bhaskar↗

High Performance Approximate Computing

This code repository contains the implementation of the "High-Performance Approximate Computing" (HPAC) toolkit. The toolkit allows you to approximate your own C/C++. The developer uses "pragma's" to annotate code regions as approximate. The compiler extensions lower these pragmas to either compiletime approximate techniques or runtime approximation techniques. At execution time, the implemented runtime system decides which annotated regions it should approximate. HPAC also provides a set of script utilities. The utilities perform a grid search within approximation parameters and performance. The user can analyze the raw data to identify optimal approximation techniques for the application.

Parasyris, Konstantinos↗

A step in the direction of resolving the paradox of Perdew–Zunger self-interaction correction. II. Gauge consistency of the energy density at three levels of approximation

The Perdew-Zunger(PZ) self-interaction correction (SIC) was designed to correct the one-electron limit of any approximate density functional for the exchange-correlation (xc) energy, while yielding no correction to the exact functional. Unfortunately, it spoils the slowly-varying-in-space limits of the uncorrected approximate functionals, where those functionals are right by construction. The right limits can be restored by locally scaling down the energy density of the PZ SIC in many-electron regions, but then a spurious correction to the exact functional would be found unless the self-Hartree and exact self-xc terms of the PZ SIC energy density were expressed in the same gauge. Only the local density approximation satisfies the same-gauge condition for the energy density, which explains why the recent local-scaling SIC (LSIC) is found here to work excellently for atoms and molecules only with this basic approximation, and not with the more advanced generalized gradient approximations (GGAs) and meta-GGAs, which lose the Hartree gauge via simplifying integrations by parts. The transformation of energy density that achieves the Hartree gauge for the exact xc functional can also be applied to approximate functionals. Doing so leads to a simple scaled-down self-interaction (sdSIC) correction that is typically much more accurate than PZ SIC in tests for many molecular properties (including equilibrium bond lengths). The present work shows unambiguously that the largest errors of PZ SIC applied to standard functionals at three levels of approximation can be removed by restoring their correct slowlyvarying- density limits. Here, it also confirms the relevance of these limits to atoms and molecules.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

A Framework for Error-Bounded Approximate Computing, with an Application to Dot Products

Approximate computing techniques, which trade off the computation accuracy of an algorithm for better performance and energy efficiency, have been successful in reducing computation and power costs in several domains. However, error sensitive applications in high-performance computing are unable to benefit from existing approximate computing strategies that are not developed with guaranteed error bounds. While approximate computing techniques can be developed for individual high-performance computing applications by domain specialists, this often requires additional theoretical analysis and potentially extensive software modification. Hence, the development of low-level error-bounded approximate computing strategies that can be introduced into any high-performance computing application without requiring additional analysis or significant software alterations is desirable. In this paper, we provide a contribution in this direction by proposing a general framework for designing error-bounded approximate computing strategies and apply it to the dot product kernel to develop \bf qdot---an error-bounded approximate dot product kernel. Following the introduction of qdot, here we perform a theoretical analysis that yields a deterministic bound on the relative approximation error introduced by qdot. Empirical tests are performed to illustrate the tightness of the derived error bound and to demonstrate the effectiveness of qdot on a synthetic dataset, as well as two scientific benchmarks---the conjugate gradient (CG) and power methods. In some instances, using qdot for the dot products in CG can result in many components being quantized to half precision without increasing the iteration count required for convergence to the same solution as CG using a double precision dot product.

97 MATHEMATICS AND COMPUTING↗

Recognizability of Demographically Altered Computerized Facial Approximations in an Automated Facial Recognition Context for Potential Application in Unidentified Persons Data Repositories

This study examined the recognizability of demographically altered facial approximations for potential utility in unidentified persons tracking systems. Five computer-generated approximations were generated for each of 26 African male participants using the following demographic parameters: (i) African male (true demographics), (ii) African female, (iii) Caucasian male, (iv) Asian male, and (v) Hispanic male. Overall, 62% of the true demographic facial approximations for the 26 African male participants examined were matched to a corresponding life photo within the top 50 images of a candidate list generated from an automated blind search of an optimally standardized gallery of 6159 photographs. When the African male participants were processed as African females, the identification rate was 50%. In contrast, less congruent identification rates were observed when the African male participants were processed as Caucasian (42%), Asian (35%), and Hispanic (27%) males. The observed results suggest that approximations generated using the opposite sex may be operationally informative if sex is unknown. The performance of approximations generated using alternative ancestry assignments, however, was less congruent with the performance of the true demographic approximation (African male) and may not yield as operationally constructive data as sex-altered approximations.

59 BASIC BIOLOGICAL SCIENCES↗

Robust scalable initialization for Bayesian variational inference with multi-modal Laplace approximations

Predictive modeling typically relies on Bayesian model calibration to provide uncertainty quantification. Variational inference utilizing fully independent (“mean-field”) Gaussian distributions are often used as approximate probability density functions. This simplification is attractive since the number of variational parameters grows only linearly with the number of unknown model parameters. However, the resulting diagonal covariance structure and unimodal behavior can be too restrictive to provide useful approximations of intractable Bayesian posteriors that exhibit highly non-Gaussian behavior, including multimodality. High-fidelity surrogate posteriors for these problems can be obtained by considering the family of Gaussian mixtures. Gaussian mixtures are capable of capturing multiple modes and approximating any distribution to an arbitrary degree of accuracy, while maintaining some analytical tractability. Unfortunately, variational inference using Gaussian mixtures with full-covariance structures suffers from a quadratic growth in variational parameters with the number of model parameters. The existence of multiple local minima due to strong nonconvex trends in the loss functions often associated with variational inference present additional complications, These challenges motivate the need for robust initialization procedures to improve the performance and computational scalability of variational inference with mixture models. In this work, we propose a method for constructing an initial Gaussian mixture model approximation that can be used to warm-start the iterative solvers for variational inference. The procedure begins with a global optimization stage in model parameter space. In this step, local gradient-based optimization, globalized through multistart, is used to determine a set of local maxima, which we take to approximate the mixture component centers. Around each mode, a local Gaussian approximation is constructed via the Laplace approximation. Finally, the mixture weights are determined through constrained least squares regression. The robustness and scalability of the proposed methodology is demonstrated through application to an ensemble of synthetic tests using high-dimensional, multimodal probability density functions. Here, the practical aspects of the approach are demonstrated with inversion problems in structural dynamics.

97 MATHEMATICS AND COMPUTING↗

Unsteady Stokes flow near boundaries: the point-particle approximation and the method of reflections

Problems of particle dynamics involving unsteady Stokes flows in confined geometries are typically harder to solve than their steady counterparts. Approximation techniques are often the only resort. Felderhof (see e.g. J. Phys. Chem. B, vol. 109 (45), 2005, pp. 21406–21412; J. Fluid Mech. , vol. 637, 2009, pp. 285–303) has developed a point-particle approximation framework to solve such problems, especially in the context of Brownian motion. Despite excellent agreement with past experiments, this framework produces unsteady drag coefficients that depend on particle density. This is inconsistent, since the problem can be formulated mathematically without any reference to the particle’s density. We address this inconsistency in our work. Upon implementing our modifications, the framework passes consistency checks that it previously failed. Further, it is not obvious that such an approximation should work for short-time-scale motion. We investigate its validity by deriving it from a general formalism based on integral equations through a series of systematic approximations. We also compare results from the point-particle framework against a calculation performed using the method of reflections, for the specific case of a sphere near a full-slip plane boundary. We find from our analysis that the reasons for the success of the point-particle approximation are subtle and have to do with the nature of the unsteady Oseen tensor. Finally, we provide numerical predictions for Brownian motion near a full-slip and a no-slip plane wall based on the point-particle approximation as used by Felderhof, our modified point-particle approximation and the method of reflections. We show that our modifications to Felderhof’s framework would become significant for systems of metallic nanoparticles in liquids.

Mechanics↗

Direct Nonlinear Approximation for Security Region Boundary of Integrated Energy Systems: A Polynomial Chaos Expansion Solution

The strong interdependence of electricity, gas, and heating systems can facilitate fault propagation within integrated energy systems (IESs), posing significant challenges to secure operation. This paper proposes a polynomial chaos expansion (PCE)-based approximation method to accurately characterize the IES security region boundary (IES–SRB). By integrating the Karush-Kuhn-Tucker conditions with PCE theory, the IES-SRB approximation problem is reformulated as a set of nonlinear equations concerning the approximation coefficients. Using the Galerkin projection method, these equations are further transformed into a system of projection equations that govern the polynomial approximation coefficients in the IES-SRB approximation. To reduce computational complexity while maintaining high approximation accuracy, a piecewise polynomial approximation method is proposed. Numerical studies on the E39-G20-H6 and E118-G96-H52 IES test systems demonstrate that the proposed method can accurately and effectively construct IES security regions.

Wu, Chenghao [Northeast Electric Power University]↗

On the Approximability of Random-Hypergraph MAX-3-XORSAT Problems with Quantum Algorithms

Constraint satisfaction problems are an important area of computer science. Many of these problems are in the complexity class NP which is exponentially hard for all known methods, both for worst cases and often typical. Fundamentally, the lack of any guided local minimum escape method ensures the hardness of both exact and approximate optimization classically, but the intuitive mechanism for approximation hardness in quantum algorithms based on Hamiltonian time evolution is poorly understood. We explore this question using the prototypically hard MAX-3-XORSAT problem class. We conclude that the mechanisms for quantum exact and approximation hardness are fundamentally distinct. We qualitatively identify why traditional methods such as quantum adiabatic optimization are not good approximation algorithms. We propose a new spectral folding optimization method that does not suffer from these issues and study it analytically and numerically. We consider random rank-3 hypergraphs including extremal planted solution instances, where the ground state satisfies an anomalously high fraction of constraints compared to truly random problems. We show that, if we define the energy to be $E = N_{unsat}-N_{sat}$, then spectrally folded quantum optimization will return states with energy $E \leq A E_{GS}$ (where $E_{GS}$ is the ground state energy) in polynomial time, where conservatively, $A \simeq 0.6$. We thoroughly benchmark variations of spectrally folded quantum optimization for random classically approximation-hard (planted solution) instances in simulation, and find performance consistent with this prediction. We do not claim that this approximation guarantee holds for all possible hypergraphs, though our algorithm's mechanism can likely generalize widely. These results suggest that quantum computers are more powerful for approximate optimization than had been previously assumed.

Kapit, Eliot↗

Asymptotic expansions and approximations for the Caputo derivative

In this paper, we use the asymptotic expansions of the binomial coefficients and the weights of the L1 approximation to obtain approximations of order 2−α and second-order approximations of the Caputo derivative by modifying the weights of the shifted Grünwald–Letnikov difference approximation and the L1 approximation of the Caputo derivative. A modification of the shifted Grünwald–Letnikov approximation is obtained which allows second-order numerical solutions of fractional differential equations with arbitrary values of the solutions and their first derivatives at the initial point.

97 MATHEMATICS AND COMPUTING↗

H{sub 2}{sup +}, HeH and H{sub 2}: Approximating potential curves, calculating rovibrational states

Analytic consideration of the Bohr–Oppenheimer (BO) potential curves for diatomic molecules is proposed: accurate analytic interpolation for a potential curve consistent with its rovibrational spectra is found. It is shown that in the BO approximation for four lowest electronic states 1sσ{sub g} and 2pσ{sub u}, 2pπ{sub u} and 3dπ{sub g} of H{sub 2}{sup +}, the ground state X{sup 2}Σ{sup +} of HeH and the two lowest states {sup 1}Σ{sub g}{sup +} and {sup 3}Σ{sub u}{sup +} of H{sub 2}, the potential curves can be analytically interpolated in full range of internuclear distances R with not less than 4–5–6 s.d. Approximation based on matching the Laurant-type expansion at small R and a combination of the multipole expansion with one-instanton type contribution at large distances R is given by two-point Padé approximant. The position of minimum, when exists, is predicted within 1% or better. For the molecular ion H{sub 2}{sup +} in the Lagrange mesh method, the spectra of vibrational, rotational and rovibrational states (ν,L) associated with 1sσ{sub g} and 2pσ{sub u}, 2pπ{sub u} and 3dπ{sub g} potential curves are calculated. In general, it coincides with spectra found via numerical solution of the Schrödinger equation (when available) within six s.d. It is shown that 1sσ{sub g} curve contains 19 vibrational states (ν,0), while 2pσ{sub u} curve contains a single one (0,0) and 2pπ{sub u} state contains 12 vibrational states (ν,0). In general, 1sσ{sub g} electronic curve contains 420 rovibrational states, which increases up to 423 when we are beyond BO approximation. For the state 2pσ{sub u} the total number of rovibrational states (all with ν=0) is equal to 3, within or beyond Bohr–Oppenheimer approximation. As for the state 2pπ{sub u} within the Bohr–Oppenheimer approximation the total number of the rovibrational bound states is equal to 284. The state 3dπ{sub g} is repulsive, no rovibrational state is found. It is confirmed in Lagrange mesh formalism the statement that the ground state potential curve of the heteronuclear molecule HeH does not support rovibrational states. Accurate analytical expression for the potential curves of the hydrogen molecule H{sub 2} for the states {sup 1}Σ{sub g}{sup +} and {sup 3}Σ{sub u}{sup +} is presented. The ground state {sup 1}Σ{sub g}{sup +} contains 15 vibrational states (ν,0),ν=0–14. In general, this state supports 301 rovibrational states. The potential curve of the state {sup 3}Σ{sub u}{sup +} has a shallow minimum: it does not support any rovibrational state, it is repulsive.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

Practical algorithms for multivariate rational approximation

We present two approaches for computing rational approximations to multivariate functions, motivated by their effectiveness as surrogate models for high-energy physics (HEP) applications. Our first approach builds on the Stieltjes process to efficiently and robustly compute the coefficients of the rational approximation. Our second approach is based on an optimization formulation that allows us to include structural constraints on the rational approximation (in particular, constraints demanding the absence of singularities), resulting in a semi-infinite optimization problem that we solve using an outer approximation approach. We present results for synthetic and real-life HEP data, and we compare the approximation quality of our approaches with that of traditional polynomial approximations.

97 MATHEMATICS AND COMPUTING↗

Piecewise linear approximation with minimum number of linear segments and minimum error: A fast approach to tighten and warm start the hierarchical mixed integer formulation

In several areas of economics and engineering, it is often necessary to fit discrete data points or approximate nonlinear functions with continuous functions. Piecewise linear (PWL) functions are a convenient way to achieve this. PWL functions can be modeled in mathematical problems using only linear and integer variables. Moreover, there is a computational benefit in using PWL functions that have the least possible number of segments. This work proposes a novel hierarchical mixed integer linear programming (MILP) formulation that identifies a continuous PWL approximation with minimum number of linear segments for a given target maximum error. The proposed MILP formulation also identifies the solution with the least maximum error among the solutions with minimum number of segments. Then, this work proposes a fast iterative algorithm that identifies non necessarily continuous PWL approximations by solving O(S log N) linear programming (LP) problems, where N is the number of data points and S is the minimum number of segments in the non necessarily continuous case. This work demonstrates that tight bounds for the MILP problem can be derived from these approximations. Next, a fast algorithm is introduced to transform a non necessarily continuous PWL approximation into a continuous one. Finally, the tight bounds and the continuous PWL approximations are used to tighten and warm start the MILP problem. The tightened formulation is shown in experimental results to be more efficient, especially for large data sets, with a solution time that is up to two orders of magnitude less than the existing literature.

97 MATHEMATICS AND COMPUTING↗