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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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DOE OSTI2020

A unified catalog of 204,938 reference genomes from the human gut microbiome

Comprehensive, high-quality reference genomes are required for functional characterization and taxonomic assignment of the human gut microbiota. We present the Unified Human Gastrointestinal Genome (UHGG) collection, comprising 204,938 nonredundant genomes from 4,644 gut prokaryotes. These genomes encode >170 million protein sequences, which we collated in the Unified Human Gastrointestinal Protein (UHGP) catalog. The UHGP more than doubles the number of gut proteins in comparison to those present in the Integrated Gene Catalog. More than 70% of the UHGG species lack cultured representatives, and 40% of the UHGP lack functional annotations. Intraspecies genomic variation analyses revealed a large reservoir of accessory genes and single-nucleotide variants, many of which are specific to individual human populations. The UHGG and UHGP collections will enable studies linking genotypes to phenotypes in the human gut microbiome.

59 BASIC BIOLOGICAL SCIENCES↗

NASA NTRS1996

Response of Earth's Ecosystem to Global Change

The Earth is in the midst of rapid and unprecedented change, much of it caused by the enormous reproductive and resource acquisition success of the human population. For the first time in Earth's history, the actions of one species-humans-are altering the atmospheric, climatic, biospheric, and edaphic processes on a scale that rivals natural processes. How will ecosystems, involving those manipulated and managed by humans largely for human use, respond to these changes? Clearly ecosystems have been adjusting to change throughout Earth's history and evolving in ways to adapt and to maintain self-organizing behavior. And in this process, the metabolic activity of the biosphere has altered the environmental conditions it experiences. I am going to confine this presentation to a few thoughts on the present state of terrestrial ecosystems and the urgency that changes in it is bringing to all of us.

Peterson, David L.↗

DOE OSTI2022

Simultaneous dissection of grain carotenoid levels and kernel color in biparental maize populations with yellow-to-orange grain

Maize enriched in provitamin A carotenoids could be key in combatting vitamin A deficiency in human populations relying on maize as a food staple. Consumer studies indicate that orange maize may be regarded as novel and preferred. This study identifies genes of relevance for grain carotenoid concentrations and kernel color, through simultaneous dissection of these traits in 10 families of the US maize nested association mapping panel that have yellow to orange grain. Quantitative trait loci were identified via joint-linkage analysis, with phenotypic variation explained for individual kernel color quantitative trait loci ranging from 2.4% to 17.5%. These quantitative trait loci were cross-analyzed with significant marker-trait associations in a genome-wide association study that utilized ~27 million variants. Nine genes were identified: four encoding activities upstream of the core carotenoid pathway, one at the pathway branchpoint, three within the α- or β-pathway branches, and one encoding a carotenoid cleavage dioxygenase. Of these, three exhibited significant pleiotropy between kernel color and one or more carotenoid traits. Kernel color exhibited moderate positive correlations with β-branch and total carotenoids and negligible correlations with α-branch carotenoids. These findings can be leveraged to simultaneously achieve desirable kernel color phenotypes and increase concentrations of provitamin A and other priority carotenoids.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2024

Persistence of viral RNA in North American elk experimentally infected with an ancestral strain of severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2)

Abstract White-tailed deer (Odocoileus virginianus) have emerged as a reservoir host for SARS-CoV-2 given their susceptibility to infection and demonstrated high rates of seroprevalence and infection across the United States. As SARS-CoV-2 circulates within free-ranging white-tailed deer populations, there is the risk of transmission to other wildlife species and even back to the human population. The goal of this study was to determine the susceptibility, shedding, and immune response of North American elk (Cervus elaphus canadensis) to experimental infection with SARS-CoV-2, to determine if another wide-ranging cervid species could potentially serve as a reservoir host for the virus. Here we demonstrate that while North American elk do not develop clinical signs of disease, they do develop a neutralizing antibody response to infection, suggesting the virus is capable of replicating in this mammalian host. Additionally, we demonstrate SARS-CoV-2 RNA presence in the medial retropharyngeal lymph nodes of infected elk three weeks after experimental infection. Consistent with previous observations in humans, these data may highlight a mechanism of viral persistence for SARS-CoV-2 in elk.

Science & Technology - Other Topics↗

NASA NTRS2020

Africa Food Security & Agriculture: Predicting the Likelihood of Human-elephant Conflict and Assessing Elephant Habitat Conditions During Extreme Drought and Crop Deficit in the Kavango-Zambezi Area

Human-wildlife conflict is increasingly more common due to human population growth, habitat fragmentation, and changing climatic conditions. This conflict is particularly evident in the Kavango-Zambezi area, where over three million people share the landscape with an abundant megafauna population. As the changing climate continues to exacerbate drought severity and subsequent food availability, conflict between humans and wildlife has become more prevalent. In the Kavango-Zambezi area, conflict between elephants and humans has resulted in crop loss, property damage, and threats to public safety. In order to manage current and future conflict, The Ecoexist Project and Connected Conservation have been working to empower farmers and conserve the natural habitat. This DEVELOP project employed Earth observations to conduct a time series analysis of vegetation health change, elephant movement, and climate conditions, from 2017 to 2020. Data were aggregated into the wet (November through April) and dry (May through October) seasons. The resulting analysis demonstrated the potential to use Landsat 8 Operational Land Imager (OLI), Global Precipitation Measurement’s Integrated Multi-satellite Retrievals for GPM (GPM IMERG), and TerraClimate data to identify potential areas of conflict under increased seasonal variability. An improved understanding of conflict drivers will help support sustainable wildlife conservation and food security in the future.

DEVELOP Project Summary↗

NASA NTRS2020

Africa Food Security & Agriculture: Predicting the Likelihood of Human-elephant Conflict and Assessing Elephant Habitat Conditions During Extreme Drought and Crop Deficit in the Kavango-Zambezi Area

DEVELOP Tech Paper↗

NASA NTRS1963

Patterns of high- and low-density lipoprotein distributions in man

Patterns of high- and low-density ultracentrifugal lipoprotein distribution in healthy human population

PROTEIN↗

NASA NTRSDate not supplied

Space Radiation and Central Nervous System Impacts: NASA Standards and Evidence

It is well understood that large radiation localized doses to the brain cause clinically significant impacts to the central nervous system in human populations. However, the effects in adults exposed to lower doses remain unclear due to lack of data in relevant human cohorts. The impact of exposure to high-energy particles is even less understood. NASA’s Human Research Program relies heavily on model systems to characterize the impacts of the space radiation environment on the human brain and how potential changes may effect mission success and long term health and well-being. Animal, cellular, and molecular experiments implicate multiple – and possibly related – mechanisms that mediate impacts to the central nervous system in model systems including, but not limited to inflammation, immune responses, oxidative stress, metabolism, myelination, molecule transport, electrophysiology, and a variety of “omic” changes. While animal studies demonstrate potential changes across a number of cognitive and behavioral domains the direct applicability to the astronaut population remains unclear. Furthermore data access experiments and model systems can be inconsistent and dependent on multiple experimental variables indicating a clear need for robust validation. To minimize potential impacts to astronauts NASA limits dose to the CNS based on a combination of terrestrial epidemiology informed by experimental evidence in model systems. To date no recommendations have been provided by the National Committee on Radiation Protection and Measurements. This presentation will provide an overview of NASA’s current dose limits for CNS exposure to space radiation as well as highlights of the current state of evidence and ongoing research.

S Robin Elgart↗

DOE OSTI2022

How the Great Plains Dust Bowl drought spread heat extremes around the Northern Hemisphere

Abstract Extraordinary heat extremes occurred in the 1930s in areas of the Northern Hemisphere far from the record setting heat over the US associated with the Great Plains Dust Bowl drought. A climate model sensitivity experiment is used to identify a new mechanism involving a warm season circumglobal atmospheric teleconnection pattern that spread heat extremes over far-flung areas of the Northern Hemisphere arising from the intense heating over the desiccated Great Plains themselves. It has only been in the twenty-first century that human populations in these regions of the Northern Hemisphere have experienced heat extremes comparable to the 1930s. This demonstrates that humans influenced Northern Hemisphere temperature and heat extremes through disastrous and unprecedented regional land use practices over the Great Plains, and points to the possibility that future intense regional droughts could affect heat extremes on hemispheric scales.

54 ENVIRONMENTAL SCIENCES↗

NASA NTRS1989

Global change and carrying capacity: Implications for life on Earth

Determining the long-term number of people that the planet can support without irreversibly reducing its ability to support people in the future, i.e., the carrying capacity of the Earth, is an exceedingly complex problem. About all that is known for certain is that, with present and foreseeable technologies, the human population has already exceeded the capacity. The reduction in carrying capacity that can be expected to result from direct human impacts on resources and the environment and from our indirect impacts of the climate system is discussed. Global warming and modeling global change and food security are also discussed with respect to carrying capacity.

Ehrlich, Paul R.↗

NASA NTRS1992

Further analyses of human kidney cell populations separated on the Space Shuttle

Cultured human embryonic kidney cells were separated into electrophoretic subpopulations in laboratory experiments and in two separation experiments on the STS-8 (Challenger) Space Shuttle flight using the mid-deck Continuous Flow Electrophoretic Separator (CFES). Populations of cells from each fraction were cultured for the lifetime of the cells, and supernatant medium was withdrawn and replaced at 4-day intervals. Withdrawn medium was frozen at -120 C for subsequent analysis. Enzyme assays, antibodies and gel electrophoresis were used as analytical tools for the detection and quantization of plasminogen activators in these samples. These assays of frozen-culture supernatant fluids confirmed the electrophoretic separation of plasminogen-activator-producing cells from nonproducing cells, the isolation of cells capable of sustained production, and the separation of cells that produce different plasminogen activators from one other.

Stewart, Robin M.↗

DOE OSTI2024

Wildfires increasingly threaten oil and gas wells in the western United States with disproportionate impacts on marginalized populations

The western United States is home to most of the nation’s oil and gas production and, increasingly, wildfires. Here, we examined historical threats of wildfires for oil and gas wells, the extent to which wildfires are projected to threaten wells as climate change progresses, and exposure of human populations to these wells. From 1984 to 2019, we found that, cumulatively, 102,882 wells were located in wildfire burn areas, and 348,853 people were exposed (resided within ≤ 1 km). During this period, we observed a 5-fold increase in the number of wells in wildfire burn areas and a doubling of the population within 1 km of these wells. These trends are projected to increase by late century, likely threatening human health. Approximately 2.9 million people reside within 1 km of wells in areas with high wildfire risk, and Black, Hispanic, and Native American people have disproportionately high exposure to wildfire-threatened wells.

02 PETROLEUM↗

DOE OSTI2020

AeDES: a next-generation monitoring and forecasting system for environmental suitability of Aedes-borne disease transmission

Aedes-borne diseases, such as dengue and chikungunya, are responsible for more than 50 million infections worldwide every year, with an overall increase of 30-fold in the last 50 years, mainly due to city population growth, more frequent travels and ecological changes. In the United States of America, the vast majority of Aedes-borne infections are imported from endemic regions by travelers, who can become new sources of mosquito infection upon their return home if the exposed population is susceptible to the disease, and if suitable environmental conditions for the mosquitoes and the virus are present. Since the susceptibility of the human population can be determined via periodic monitoring campaigns, the environmental suitability for the presence of mosquitoes and viruses becomes one of the most important pieces of information for decision makers in the health sector. We present a next-generation monitoring and forecasting system for Aedes-borne diseases’ environmental suitability (AeDES) of transmission in the conterminous United States and transboundary regions, using calibrated ento-epidemiological models, climate models and temperature observations. After analyzing the seasonal predictive skill of AeDES, we briefly consider the recent Zika epidemic, and the compound effects of the current Central American dengue outbreak happening during the SARS-CoV-2 pandemic, to illustrate how a combination of tailored deterministic and probabilistic forecasts can inform key prevention and control strategies .

54 ENVIRONMENTAL SCIENCES↗

NASA NTRSDate not supplied

Predicting the Likelihood of Human-Elephant Conflict and Assessing Patterns in Elephant Movements Over Varying Habitat Conditions in the Kavango-Zambezi Area

In the Kavango-Zambezi area of southern Africa, three million people live within areas frequently traveled by free-ranging elephants. As the region continues to develop rapidly, urban and agricultural settlements further encroach upon the land that these elephants use. As elephants come into more frequent contact with urban and agricultural areas, human populations face financial loss through crop damage and the potential for injury from direct conflict with elephants. Elephant populations are also at risk of injuries from conflict as well as illness related to the consumption of waste. In order to implement human-elephant conflict mitigation strategies, local conservation groups need to be informed on best practices for coexistence. This project aided The Ecoexist Project and Connected Conservation in understanding the ecological factors that drive elephant movement into human settlements and provided Earth observation data to support conflict management in the future. The team used Landsat 5 Thematic Mapper (TM), Landsat 8 Operational Land Imager (OLI) data to create land use land cover maps and calculate vegetation indices, and used TerraClimate data to analyze drought conditions. These classified maps allowed us to display a time series of human settlement from 1990 to the present and were made explorable alongside other environmental variables in an updated Google Earth Engine (GEE) tool. This project also provided heat maps that show the risk of human-elephant conflict based on historical data of HEC locations. This analysis will provide support for conservation experts in determining best practices for future mitigation and prevention of human-elephant conflict.

Ariel Calle↗

NASA NTRS2021

Delaware Ecological Forecasting: Assessing Land Cover and Soil to Identify Suitable Sites for Tidal Marsh Migration in Delaware

Tidal wetlands provide vital resources for the state of Delaware, crucial not only for maintaining important ecosystem functions, but also for providing human populations with substantial services. Healthy wetland networks offer protection from severe weather, reduce flooding, improve water quality, and provide opportunities for education and recreation. However, human activities in combination with natural events, continue to cause substantial loss of wetland cover and damage wetland health. Over the last thirty years, the state of Delaware has experienced a net loss of roughly 5,000 acres of wetland. In collaboration with the Delaware Department of Natural Resources and Environmental Control (DNREC), the team used NASA Earth observations including Landsat 5 Thematic Mapper (TM), Landsat 8 Operational Land Imager (OLI), Terra Moderate Resolution Imaging Spectroradiometer (MODIS), and Global Precipitation Measurement Integrated Multi-Satellite Retrievals (GPM IMERG) to develop a methodology to monitor recent changes in wetland cover and forecast landward marsh migration due to sea-level rise, changes to climate, and human development. Trend analysis of current and past climate conditions in precipitation and temperature revealed an overall increase in both metrics. Using Land Change Modeler in TerrSet and Suitability Modeler in ArcGIS Pro, the team visualized landcover shifts over the last 20 years, indicating a general pattern of net wetland loss and identified locations where marsh migration could potentially occur in the future. These observations will enable better planning for restoration activities and in form decision-making to preserve wetland health and ecosystem functions.

McKenna Brahler↗

DOE OSTI2024

Beneficiaries, equity, and trade-offs in estuarine and coastal ecosystem services

Estuarine and coastal ecosystems support human populations in myriad ways. Traditionally, researchers have focused on the biophysical processes that underlie these benefits and their economic values. In the decade since the 1st Treatise, the literature on cultural ecosystem services, human health benefits, and the equitable distribution of societal benefits and burdens has grown tremendously. In this chapter we outline three dimensions of equity as they relate to estuarine and coastal ecosystems: procedural, recognitional, and distributional equity. We then apply the dimensions of equity to a suite of provisioning, regulating, and cultural ecosystem services. Finally, we explore trade-offs and beneficiaries of these ecosystem services using three case studies that consider equity in a variety of estuarine and coastal management decisions.

beneficiaries↗

NASA NTRS2002

Determinants affecting physical activity levels in animal models

Weight control is dependent on energy balance. Reduced energy expenditure (EE) associated with decreased physical activity is suggested to be a major underlying cause in the increasing prevalence of weight gain and obesity. Therefore, a better understanding of the biological determinants involved in the regulation of physical activity is essential. To facilitate interpretation in humans, it is helpful to consider the evidence from animal studies. This review focuses on animal studies examining the biological determinants influencing activity and potential implications to human. It appears that physical activity is influenced by a number of parameters. However, regardless of the parameter involved, body weight appears to play an underlying role in the regulation of activity. Furthermore, the regulation of activity associated with body weight appears to occur only after the animal achieves a critical weight. This suggests that activity levels are a consequence rather than a contributor to weight control. However, the existence of an inverse weight-activity relationship remains inconclusive. Confounding the results are the multifactorial nature of physical activity and the lack of appropriate measuring devices. Furthermore, many determinants of body weight are closely interlocked, making it difficult to determine whether a single, combination, or interaction of factors is important for the regulation of activity. For example, diet-induced obesity, aging, lesions to the ventral medial hypothalamus, and genetics all produce hypoactivity. Providing a better understanding of the biological determinants involved in the regulation of activity has important implications for the development of strategies for the prevention of weight gain leading to obesity and subsequent morbidity and mortality in the human population.

Review↗

DOE OSTI2022

Scanning the RBD-ACE2 molecular interactions in Omicron variant

The emergence of new SARS-CoV-2 variants poses a threat to the human population where it is difficult to assess the severity of a particular variant of the virus. Spike protein and specifically its receptor binding domain (RBD) which makes direct interaction with the ACE2 receptor of the human has shown prominent amino acid substitutions in most of the Variants of Concern. Here, in this work, by using all-atom molecular dynamics simulations we compare the interaction of Wild-type RBD/ACE2 receptor complex with that of the latest Omicron variant of the virus. We observed a very interesting diversification of the charge, dynamics and energetics of the protein complex formed upon mutations. These results would help us in understanding the molecular basis of binding of the Omicron variant with that of SARS-CoV-2 Wild-type.

60 APPLIED LIFE SCIENCES↗