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Comparison of Likelihood Methods for Generalized Linear Mixed Models with Application to Quiet Supersonic Flights 2018 Data

Repeated measurement will be a feature of the survey data collected during the Quesst missionX-59 community response tests (CRT). Since each participant will report his or her categorical level of annoyance in response to multiple events, the responses from any single individual may be correlated with one another. Several models within the class of generalized linear mixed models (GLMM) are pertinent to the analysis of correlated categorical outcomes; the random intercept logistic regression model is one example. Both Bayesian and frequentist methods for fitting these models are available, with frequentist methods relying on some form of approximation (of either an integral or the integrand) that appears in the marginal likelihood function. Given several anticipated similarities of the X-59 CRT data to data collected during a past risk reduction, Quiet Supersonic Flights 2018 (QSF18), this short note is intended to create awareness. It documents an instance in which a reported population average dose-response relationship derived from QSF18 single event data was distorted by the integral approximation applied in likelihood-based methods. We review some of the available literature on the topic, compare the outputs of several different computational approaches implemented in available statistical software, and present simple corrective actions that may be useful during the Quesst mission.

dose-response model

A Bayesian Framework for Reliability Analysis of Spacecraft Deployments

Deployable subsystems are essential to mission success of most spacecraft. These subsystems enable critical functions including power, communications and thermal control. The loss of any of these functions will generally result in loss of the mission. These subsystems and their components often consist of unique designs and applications for which various standardized data sources are not applicable for estimating reliability and for assessing risks. In this study, a two stage sequential Bayesian framework for reliability estimation of spacecraft deployment was developed for this purpose. This process was then applied to the James Webb Space Telescope (JWST) Sunshield subsystem, a unique design intended for thermal control of the Optical Telescope Element. Initially, detailed studies of NASA deployment history, "heritage information", were conducted, extending over 45 years of spacecraft launches. This information was then coupled to a non-informative prior and a binomial likelihood function to create a posterior distribution for deployments of various subsystems uSing Monte Carlo Markov Chain sampling. Select distributions were then coupled to a subsequent analysis, using test data and anomaly occurrences on successive ground test deployments of scale model test articles of JWST hardware, to update the NASA heritage data. This allowed for a realistic prediction for the reliability of the complex Sunshield deployment, with credibility limits, within this two stage Bayesian framework.

Evans, John W.

Optimal Estimation Framework for Ocean Color Atmospheric Correction and Pixel-level Uncertainty Quantification

Ocean color remote sensing requires compensation for atmospheric scattering and absorption (aerosol, Rayleigh, and trace gases), referred to as atmospheric correction (AC). AC allows inference of parameters such as spectrally resolved remote sensing reflectance ( R rs )(λ) ; sr 1 ) at the ocean surface from the top-of-atmosphere reflectance. Often, the uncertainty of this process is not fully explored. Bayesian inference techniques provide a simultaneous AC and uncertainty assessment via a full posterior distribution of the relevant variables, given the prior distribution of those variables and the radiative transfer (RT) likelihood function. Given uncertainties in the algorithm inputs, the Bayesian framework enables better constraints on the AC process by using the complete spectral information compared to traditional approaches that use only a subset of bands for AC. This paper investigates a Bayesian inference research method (Optimal Estimation, OE) for ocean color AC by simultaneously retrieving atmospheric and ocean properties using all visible and near-infrared spectral bands. The OE algorithm analytically approximates the posterior distribution of parameters based on normality assumptions and provides a potentially viable operational algorithm with a reduced computational expense. We developed a Neural Network (NN) RT forward model look-up-table-based emulator to increase algorithm efficiency further and thus speed up the likelihood computations. We then applied the OE algorithm to synthetic data and observations from the MODerate resolution Imaging Spectroradiometer (MODIS) on NASA’s Aqua spacecraft. We compared the R rs )(λ) retrieval and its uncertainty estimates from the OE method with in-situ validation data from the SeaWiFS Bio-optical Archive and Storage System (SeaBASS) and Aerosol Robotic Network Ocean Color (AERONET-OC) datasets. The OE algorithm improved R rs )(λ) estimates relative to the NASA standard operational algorithm by improving all statistical metrics at 443, 555, and 667 nm. Unphysical negative R rs )(λ) , which often appear in complex water conditions, was reduced by a factor of 3. The OE-derived pixel-level R rs )(λ) uncertainty estimates were also assessed relative to in-situ data and were shown to have skill.

Atmospheric correction

Characterization of a SiPM-based monolithic neutron scatter camera using dark counts

The Single Volume Scatter Camera (SVSC) Collaboration aims to develop portable neutron imaging systems for a variety of applications in nuclear non-proliferation. Conventional double-scatter neutron imagers are composed of several separate detector volumes organized in at least two planes. A neutron must scatter in two of these detector volumes for its initial trajectory to be reconstructed. As such, these systems typically have a large footprint and poor geometric efficiency. We report on the design and characterization of a prototype monolithic neutron scatter camera that is intended to significantly improve upon the geometrical shortcomings of conventional neutron cameras. The detector consists of a 50 mm×56 mm× 60 mm monolithic block of EJ-204 plastic scintillator instrumented on two faces with arrays of 64 Hamamatsu S13360-6075PE silicon photomultipliers (SiPMs). The electronic crosstalk is limited to < 5% between adjacent channels and < 0.1% between all other channel pairs. SiPMs introduce a significantly elevated dark count rate over PMTs, as well as correlated noise from after-pulsing and optical crosstalk. In this article, we characterize the dark count rate and optical crosstalk and present a modified event reconstruction likelihood function that accounts for them. We find that the average dark count rate per SiPM is 4.3 MHz with a standard deviation of 1.5 MHz among devices. The analysis method we employ to measure internal optical crosstalk also naturally yields the mean and width of the single-electron pulse height. Here, we calculate separate contributions to the width of the single-electron pulse-height from electronic noise and avalanche fluctuations. We demonstrate a timing resolution for a single-photon pulse to be (128 ± 4) ps. Finally, coincidence analysis is employed to measure external (pixel-to-pixel) optical crosstalk. We present a map of the average external crosstalk probability between 2×4 groups of SiPMs, as well as the in-situ timing characteristics extracted from the coincidence analysis. Further work is needed to characterize the performance of the camera at reconstructing single- and double-site interactions, as well as image reconstruction.

47 OTHER INSTRUMENTATION

Dark Energy Survey Year 3 results: $w$CDM cosmology from simulation-based inference with persistent homology on the sphere

We present cosmological constraints from Dark Energy Survey Year 3 (DES Y3) weak lensing data using persistent homology, a topological data analysis technique that tracks how features like clusters and voids evolve across density thresholds. For the first time, we apply spherical persistent homology to galaxy survey data through the algorithm TopoS2, which is optimized for curved-sky analyses and HEALPix compatibility. Employing a simulation-based inference framework with the Gower Street simulation suite, specifically designed to mimic DES Y3 data properties, we extract topological summary statistics from convergence maps across multiple smoothing scales and redshift bins. After neural network compression of these statistics, we estimate the likelihood function and validate our analysis against baryonic feedback effects, finding minimal biases (under $0.3σ$) in the $Ω_\mathrm{m}-S_8$ plane. Assuming the $w$CDM model, our combined Betti numbers and second moments analysis yields $S_8 = 0.821 \pm 0.018$ and $Ω_\mathrm{m} = 0.304\pm0.037$-constraints 70% tighter than those from cosmic shear two-point statistics in the same parameter plane. Our results demonstrate that topological methods provide a powerful and robust framework for extracting cosmological information, with our spherical methodology readily applicable to upcoming Stage IV wide-field galaxy surveys.

Prat, J. [Nordita; Royal Inst. Tech., Sodertalje;

Bayesian quantification of observability and equation of state of twin stars

The possibility of discovering twin stars, two neutron stars (NSs) with the same mass but different radii, is usually studied in forward modelings by using a restricted number of NS matter equations of state (EOSs) encapsulating a first-order phase transition from hadronic to quark matter (QM). Informing our likelihood function with the NS radius data from GW170817 and using a metamodel with nine parameters capable of mimicking most NS EOSs available in the literature, we conduct a Bayesian quantification of the observability and underlying EOSs of twin stars. Of the accepted EOSs, between 12 and 18% yield twin stars, depending on the restrictions we place on the second branch. The possibility of twin stars remains robust even under recent observational constraints. Here, we show that many of these twin star scenarios are observable with currently available levels of accuracy in measuring NS radii. We also present the marginalized posterior probability density functions (PDFs) of every EOS parameter for each of four mass-radius correlation topologies. We find that the inferred EOS depends sensitively on not only whether twin stars are present, but also the category of twin stars, indicating that the observation of twin stars would provide a strong constraint on the underlying EOS. In particular, for two coexisting hybrid stars having QM cores at different densities, the PDF for QM speed of sound squared 𝑐$^2_{qm}$ has two peaks, one below and another above the conformal limit 𝑐$^2_{qm}$ = 1/3 predicted by perturbative QCD.

QCD in nuclear reactions

Equation of state at neutron-star densities and beyond from perturbative QCD

We explore the consequences of imposing robust thermodynamic constraints arising from perturbative quantum chromodynamics (QCD) when inferring the dense-matter equation-of-state (EOS). We find that the termination density, up to which the EOS modeling is performed in an inference setup, strongly affects the constraining power of the QCD input. This sensitivity in the constraining power arises from EOSs that have a specific form, with drastic softening immediately above the termination density followed by a strong stiffening. Here we also perform explicit modeling of the EOS down from perturbative-QCD densities to construct a new QCD likelihood function that incorporates additional perturbative-QCD calculations of the sound speed and is insensitive to the termination density, which we make publicly available.

79 ASTRONOMY AND ASTROPHYSICS

The Simons Observatory: Combining cross-spectral foreground cleaning with multitracer B -mode delensing for improved constraints on inflation

The Simons Observatory (SO), due to start full science operations in early 2025, aims to set tight constraints on inflationary physics by inferring the tensor-to-scalar ratio r from measurements of cosmic microwave background (CMB) polarization B-modes. Its nominal design including three small-aperture telescopes (SATs) targets a precision σ⁡(r = 0) ≤ 0.003 without delensing. Achieving this goal and further reducing uncertainties requires a thorough understanding and mitigation of other large-scale B-mode sources such as Galactic foregrounds and weak gravitational lensing. We present an analysis pipeline aiming to estimate r by including delensing within a cross-spectral likelihood, and demonstrate it for the first time on SO-like simulations accounting for various levels of foreground complexity, inhomogeneous noise and partial sky coverage. As introduced in an earlier SO delensing paper, lensing B-modes are synthesized using internal CMB lensing reconstructions as well as Planck-like cosmic infrared background maps and LSST-like galaxy density maps. We then extend SO’s power-spectrum-based foreground-cleaning algorithm to include all auto- and cross-spectra between the lensing template and the SAT B-modes in the likelihood function. This allows us to constrain r and the parameters of our foreground model simultaneously. Within this framework, we demonstrate the equivalence of map-based and cross-spectral delensing and use it to motivate an optimized pixel-weighting scheme for power spectrum estimation. We start by validating our pipeline in the simplistic case of uniform foreground spectral energy distributions. In the absence of primordial B-modes, we find that the 1⁢σ statistical uncertainty on r, σ⁡(r), decreases by 37% as a result of delensing. Tensor modes at the level of r = 0.01 are successfully detected by our pipeline. Even when using more realistic foreground models including spatial variations in the dust and synchrotron spectral properties, we obtain unbiased estimates of r both with and without delensing by employing the moment-expansion method. In this case, uncertainties are increased due to the higher number of model parameters, and delensing-related improvements range between 27% and 31%. These results constitute the first realistic assessment of the delensing performance at SO’s nominal sensitivity level.

79 ASTRONOMY AND ASTROPHYSICS

Systematic Bayesian evaluation of resonance parameters in 19 Ne for the 15 O ⁡(𝛼, 𝛾)⁢ 19 Ne and 18 F ⁡(𝑝, 𝛼)⁢ 15 O reactions

Here, we present a comprehensive evaluation of the nuclear structure properties of 19 Ne using a novel and rigorous Bayesian statistical framework. Precise characterization of 19 Ne resonance parameters is critical for accurately determining reaction rates of the astrophysically significant 15 O ⁡(𝛼, 𝛾)⁢ 19 Ne and 18 F ⁡(𝑝, 𝛼)⁢ 15 O reactions, which govern breakout from the hot CNO cycle in x-ray bursts and influence 𝛾-ray emission in novae, respectively. By reconstructing likelihood functions from published experimental data—including asymmetric uncertainties and upper or lower limits—we derive posterior distributions for resonance energies, decay widths, and branching ratios. Our Bayesian approach systematically incorporates previously reported discrepancies among measurements, providing a statistically robust and consistent treatment of these uncertainties. The evaluated resonance parameters and associated uncertainties provide crucial input for stellar nucleosynthesis modeling, contributing to a refined understanding of explosive astrophysical phenomena.

Kim, Sohyun H. [Sungkyunkwan Univ., Suwon (Republi

Generalized Bayesian MARS: Tools for Stochastic Computer Model Emulation

The multivariate adaptive regression spline (MARS) approach of Friedman and its Bayesian counterpart are effective approaches for the emulation of computer models. The traditional assumption of Gaussian errors limits the usefulness of MARS, and many popular alternatives, when dealing with stochastic computer models. Here, we propose a generalized Bayesian MARS (GBMARS) framework which admits the broad class of generalized hyperbolic distributions as the induced likelihood function. This allows us to develop tools for the emulation of stochastic simulators which are parsimonious, scalable, and interpretable and require minimal tuning, while providing powerful predictive and uncertainty quantification capabilities. GBMARS is capable of robust regression with t distributions, quantile regression with asymmetric Laplace distributions, and a general form of “Normal-Wald” regression in which the shape of the error distribution and the structure of the mean function are learned simultaneously. We demonstrate the effectiveness of GBMARS on various stochastic computer models, and we show that it compares favorably to several popular alternatives.

97 MATHEMATICS AND COMPUTING

Simulating Continuum-based Redshift Measurement in the Roman’s High Latitude Spectroscopic Survey

We investigate the capability of the Nancy Grace Roman Space Telescope’s (Roman) Wide-Field Instrument G150 slitless grism to detect red, quiescent galaxies based on the current reference survey. We simulate dispersed images for Roman reference High-Latitude Spectroscopic Survey (HLSS) and analyze two-dimensional spectroscopic data using the grism Redshift and Line Analysis (Grizli) software. This study focus on assessing Roman grism’s capability for continuum-level redshift measurement for a redshift range of 0.5 ≤ z ≤ 2.5. The redshift recovery is assessed by setting three requirements of: σ z = $\frac{|z–z_{true}|}{1+z}$ ≤ 0.01, signal-to-noise ratio≥ 5 and the presence of a single dominant peak in redshift likelihood function. We find that, for quiescent galaxies, the reference HLSS can reach a redshift recovery completeness of ≥50% for F158 magnitude brighter than 20.2 mag. We also explore how different survey parameters, such as exposure time and the number of exposures, influence the accuracy and completeness of redshift recovery, providing insights that could optimize future survey strategies and enhance the scientific yield of the Roman in cosmological research.

Astronomical simulations

Signal sequence detection given noisy, common background image sets.

The optimum processing (likelihood functional) is found for a set of M images, each the sum of a member of a signal sequence due to an object to be detected and its parameters estimated, a sample function of a noise field, and a sample function of a common background field. The noise fields are independent, zero mean, white Gaussian fields, all independent of the background field. The latter is assumed to be either (1) completely unknown or of known mean and covariance functions with (2) a certain fluctuation property or (3) Gaussian. Three equivalent forms of the optimum processing are found: (1) a summation of generalized matched filterings of the images, (2) a summation of matched filtering of certain generalized differences of the images, and (3) a summation of 'estimator-correlator' type filterings. The detection performance and optimum signal/image selection under the Neyman-Pearson criterion is given, and is shown that optimum processor and signal design can completely eliminate any effect of the background on detectability.

Harger, R. O.

A square root formulation for the combined state-parameter estimator with application to the identification of sailplane performance

A square root formulation is presented for the discrete combined state parameter estimation problem with linear plant dynamics, Gaussian random disturbances, and constant but uncertain parameters. The estimator is a combination of the classical Kalman filter and a maximum likelihood algorithm which maximizes the parameter log-likelihood function using a first order search routine.

Froidevaux, M. R.

Ambiguity resolution in systems using Omega for position location

The lane ambiguity problem prevents the utilization of the Omega system for many applications such as locating buoys and balloons. The method of multiple lines of position introduced herein uses signals from four or more Omega stations for ambiguity resolution. The coordinates of the candidate points are determined first through the use of the Newton iterative procedure. Subsequently, a likelihood function is generated for each point, and the ambiguity is resolved by selecting the most likely point. The method was tested through simulation.

Frenkel, G.

UHMLE: Program description user guide

A program which computes maximum likelihood estimates for the general normal mixture is introduced. The program allows the user to fix any subsets of the mixture parameters; this fixed set may be redefined at various times in the iteration process. There is considerable time saved in computing the likelihoods if the diagonal form is specified. Hence, in the early iterations the diagonal assumption might be used, changing over to the full covariance mode later in the iteration process for a more refined solution. This flexibility allows the user to choose the sequence of parameter configurations in the iteration process which he feels will optimize the computation time required as well as possibly avoid convergence to suboptimal local maxima of the likelihood function.

Cobely, W. A.

Classification improvement by optimal dimensionality reduction when training sets are of small size

A computer simulation was performed to test the conjecture that, when the sizes of the training sets are small, classification in a subspace of the original data space may give rise to a smaller probability of error than the classification in the data space itself; this is because the gain in the accuracy of estimation of the likelihood functions used in classification in the lower dimensional space (subspace) offsets the loss of information associated with dimensionality reduction (feature extraction). A number of pseudo-random training and data vectors were generated from two four-dimensional Gaussian classes. A special algorithm was used to create an optimal one-dimensional feature space on which to project the data. When the sizes of the training sets are small, classification of the data in the optimal one-dimensional space is found to yield lower error rates than the one in the original four-dimensional space.

Starks, S. A.

Geologic mapping using LANDSAT data

The feasibility of automated classification for lithologic mapping with LANDSAT digital data was evaluated using three classification algorithms. The two supervised algorithms analyzed, a linear discriminant analysis algorithm and a hybrid algorithm which incorporated the Parallelepiped algorithm and the Bayesian maximum likelihood function, were comparable in terms of accuracy; however, classification was only 50 per cent accurate. The linear discriminant analysis algorithm was three times as efficient as the hybrid approach. The unsupervised classification technique, which incorporated the CLUS algorithm, delineated the major lithologic boundaries and, in general, correctly classified the most prominent geologic units. The unsupervised algorithm was not as efficient nor as accurate as the supervised algorithms. Analysis of spectral data for the lithologic units in the 0.4 to 2.5 microns region indicated that a greater separability of the spectral signatures could be obtained using wavelength bands outside the region sensed by LANDSAT.

Siegal, B. S.