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PRIMA-X Final Report

The PRIMA-X (Performance Retargeting of Instrumentation, Measurement, and Analysis Technologies for Exascale Computing) project is the successor of the DOE PRIMA (Performance Refactoring of Instrumentation, Measurement, and Analysis Technologies for Petascale Computing) project, which addressed the challenge of creating a core measurement infrastructure that would serve as a common platform for both integrating leading parallel performance systems (notably TAU and Scalasca) and developing next-generation scalable performance tools. The PRIMA-X project shifts the focus away from refactorization of robust performance tools towards a re-targeting of the parallel performance measurement and analysis architecture for extreme scales. The massive concurrency, asynchronous execution dynamics, hardware heterogeneity, and multi-objective prerequisites (performance, power, resilience) that identify exascale systems introduce fundamental constraints on the ability to carry forward existing performance methodologies. In particular, there must be a deemphasis of per-thread observation techniques to significantly reduce the otherwise unsustainable flood of redundant performance data. Instead, it will be necessary to assimilate multi-level resource observations into macroscopic performance views, from which resilient performance metrics can be attributed to the computational features of the application. This requires a scalable framework for node-level and system-wide monitoring and runtime analyses of dynamic performance information. Also, the interest in optimizing parallelism parameters with respect to performance and energy drives the integration of tool capabilities in the exascale environment further. Initially, PRIMA-X was a collaborative project between the University of Oregon (lead institution) and the German Research School for Simulation Sciences (GRS). Because Prof. Wolf, the PI at GRS, accepted a position as full professor at Technische Universität Darmstadt (TU Darmstadt) starting February 1st, 2015, the project ended at GRS on January 31st, 2015. This report reflects the work accomplished at GRS until then. The work of GRS is expected to be continued at TU Darmstadt. The first main accomplishment of GRS is the design of different thread-level aggregation techniques. We created a prototype capable of aggregating the thread-level information in performance profiles using these techniques. The next step will be the integration of the most promising techniques into the Score-P measurement system and their evaluation. The second main accomplishment is a substantial increase of Score-P’s scalability, achieved by improving the design of the system-tree representation in Score-P’s profile format. We developed a new representation and a distributed algorithm to create the scalable system tree representation. Finally, we developed a lightweight approach to MPI wait-state profiling. Former algorithms either needed piggy-backing, which can cause significant runtime overhead, or tracing, which comes with its own set of scaling challenges. Our approach works with local data only and, thus, is scalable and has very little overhead.

97 MATHEMATICS AND COMPUTING↗

Capturing provenance as a diagnostic tool for workflow performance evaluation and optimization

In extreme-scale computing environments such as the DOE Leadership Computing Facilities scientific workflows are routinely used to coordinate software processes for the execution of complex, computational applications that perform in-silico experiments. Monitoring the performance of workflows without also simultaneously tracking provenance is not sufficient to understand variations between runs, configurations, versions of a code, and between changes in an implemented stack, and systems, i.e. the variability of performance metrics data in their historical context. We take a provenance-based approach and demonstrate that provenance is useful as a tool for evaluating and optimizing workflow performance in extreme-scale HPC environments. We present Chimbuko, a framework for the analysis and visualization of the provenance of performance. Chimbuko implements a method for the evaluation of workflow performance from multiple components that enables the exploration of performance metrics data at scale.

97 MATHEMATICS AND COMPUTING↗

Automated Scalability Analysis Tools for Message Passing Parallel Programs

In order to develop scalable parallel applications, a number of programming decisions have to be made during the development of the program. Performance tools that help in making these decisions are few, if existent. Traditionally, performance tools have focused on exposing performance bottlenecks of small-scale executions of the program. However, it is common knowledge that programs that perform exceptionally well on small processor configurations, more often than not, perform poorly when executed on larger processor configurations. Hence, new tools that predict the execution characteristics of scaled-up programs are an essential part of an application developers toolkit. In this paper we discuss important issues that need to be considered in order to build useful scalability analysis tools for parallel programs. We introduce a simple tool that automatically extracts scalability characteristics of a class of deterministic parallel programs. We show with the help of a number of results on the Intel iPSC/860, that predictions are within reasonable bounds.

Sarukkai, Sekhar R.↗

Behavioral Health and Performance Element: Tools and Technologies

This slide presentation reviews the research into the Behavioral Health and Performance (BHP) of the Human Research Program. The program element goal is to identify, characterize and prevent or reduce behavioral health and performance risks associated with space travel, exploration, and return to terrestrial life. To accomplish this goal the program focuses on applied research that is designed to yield deliverables that reduce risk. There are several different elements that are of particular interest: Behavioral Medicine, Sleep, and team composition, and team work. In order to assure success for NASA missions the Human Research Program develops and validate the standards for each of the areas of interest. There is discussion of the impact on BHP while astronauts are on Long Duration Missions. The effort in this research is to create tools to meet the BHP concerns, these prospective tools are reviewed.

Leveton, Lauren B.↗

Automated Instrumentation and Monitoring of Data Movement for Parallel Programs

Writing efficient parallel programs is complicated by the need to select the right data structure alignments and distributions, which determine the nature and volume of inter-processor communications. A large number of performance tools for parallel programs have been developed recently to expose these inter-processor communications. However, none of them support performance views or provide statistics in terms of inter-processor data structure interactions. A performance tool that tracks the interaction between individual data structures and the context of these interactions is essential for understanding the performance of both explicit message passing programs and data-parallel languages such as HPF. In this paper we discuss the use of compiler front end tools for automatically tracking data structure movements in message passing programs, and low-overhead monitoring and postprocessing of such codes. We demonstrate that robust instrumentation and low overhead monitoring of inter-processor data structure movements is possible, with the use of a number of NAS benchmark codes, run on the i860 hypercube. We also show that the data so collected can be used effectively by post processing tools that expose performance bottlenecks using graphical displays and performance statistics.

Sarukkai, Sekhar↗

Techniques and Tools for Performance Tuning of Parallel and Distributed Scientific Applications

Performance degradation in scientific computing on parallel and distributed computer systems can be caused by numerous factors. In this half-day tutorial we explain what are the important methodological issues involved in obtaining codes that have good performance potential. Then we discuss what are the possible obstacles in realizing that potential on contemporary hardware platforms, and give an overview of the software tools currently available for identifying the performance bottlenecks. Finally, some realistic examples are used to illustrate the actual use and utility of such tools.

Sarukkai, Sekhar R.↗

Web tools concerning performance analysis and planning support for solar energy plants starting from remotely sensed optical images

We present innovative web tools, developed also in the frame of the FP7 ENDORSE (ENergy DOwnstReam SErvices) project, for the performance analysis and the support in planning of solar energy plants (PV, CSP, CPV). These services are based on the combination between the detailed physical model of each part of the plants and the near real-time satellite remote sensing of incident solar irradiance. Starting from the solar Global Horizontal Irradiance (GHI) data provided by the Monitoring Atmospheric Composition and Climate (GMES-MACC) Core Service and based on the elaboration of Meteosat Second Generation (MSG) satellite optical imagery, the Global Tilted Irradiance (GTI) or the Beam Normal Irradiance (BNI) incident on plant's solar PV panels (or solar receivers for CSP or CPV) is calculated. Combining these parameters with the model of the solar power plant, using also air temperature values, we can assess in near-real-time the daily evolution of the alternate current (AC) power produced by the plant. We are therefore able to compare this satellite-based AC power yield with the actually measured one and, consequently, to readily detect any possible malfunctions and to evaluate the performances of the plant (so-called “Controller” service). Besides, the same method can be applied to satellite-based averaged environmental data (solar irradiance and air temperature) in order to provide a Return on Investment analysis in support to the planning of new solar energy plants (so-called “Planner” service). This method has been successfully applied to three test solar plants (in North, Centre and South Italy respectively) and it has been validated by comparing satellite-based and in-situ measured hourly AC power data for several months in 2013 and 2014. The results show a good accuracy: the overall Normalized Bias (NB) is − 0.41%, the overall Normalized Mean Absolute Error (NMAE) is 4.90%, the Normalized Root Mean Square Error (NRMSE) is 7.66% and the overall Correlation Coefficient (CC) is 0.9538. The maximum value of the Normalized Absolute Error (NAE) is about 30% and occurs for time periods with highly variable meteorological conditions. - Highlights: • We developed an online service (Controller) dedicated to solar energy plants real-time monitoring • We developed an online service (Planner) that supports the planning of new solar energy plants • The services are based on the elaboration of satellite optical imagery in near real-time • The validation with respect to in-situ measured hourly AC power data for three test solar plants shows good accuracy • The maximum value of the Normalized Absolute Error is about 30% and occurs for highly variable meteorological conditions.

14 SOLAR ENERGY↗

Development of Performance Validation Tool for the NPCS for APR1400

Availability of nuclear power plant is highly dependent on the quality of major control systems including NSSS Control Systems. It has been experienced that a small flaw hidden among the control functions resulted in large operational transient or even reactor trip. The proactive quality control of these systems is not easy because of the dynamical characteristics of control algorithms. In a stand-alone or open loop state, it is not possible to perform integral system tests because they need control loads to form an appropriate closed control loop. In the construction plant, Power Ascension Test (PAT) is the first chance to witness the overall performance of the control systems. Because the PAT is the last activity of plant construction schedule, the cost of corrective actions is very high if any functional defect is found in this stage. To minimize risk caused by late detection of control system defects, we developed a validation tool as a proactive test device for the NSSS Process Control System (NPCS) for the SKN Unit 3 which is the first APR1400 plant in Korea. In this paper, the features of the dynamic performance test tool, test methodology, and the test results are described.

21 SPECIFIC NUCLEAR REACTORS AND ASSOCIATED PLANTS↗

Tools to perform data reduction of time-of-flight data taken on BL4A (MagRef)—a Jupyter notebook approach

A collection of modules or tools to produce reflectivity profiles from data acquired with unpolarized and polarized neutron beams using the BL4A (MagRef) instrument at the Spallation Neutron Source. The Jupyter notebook approach offers transparency to the user on what is done with the data, and once the event mode data are stored as NumPy binary files empowers the user to perform the steps from their own laptop without the need for Mantid. The notebook offers two options for background subtraction, applies corrections for the wavelength dependence of the polarizer and flipper efficiencies, accounts for Zeeman energy splitting of the spin-flip channels, Qz-bins the data along contours of constant Qz, propagates errors and writes results in text format suitable for analysis with tools such as GenX.

Fitzsimmons, Michael [Oak Ridge Associated Univ., ↗

HiSpatialCluster: A novel high‐performance software tool for clustering massive spatial points

Abstract In the era of big data, spatial clustering is a very important means for geo‐data analysis. When clustering big geo‐data such as social media check‐in data, geotagged photos, and taxi trajectory points, traditional spatial clustering algorithms are facing more challenges. On the one hand, existing spatial clustering tools cannot support the clustering of massive point sets; on the other hand, there is no perfect solution for self‐adaptive spatial clustering. In order to achieve clustering of millions or even billions of points adaptively, a new spatial clustering tool—HiSpatialCluster—was proposed, in which the CFSFDP (clustering by fast search and finding density peaks) idea to find cluster centers and the DBSCAN (density‐based spatial clustering of applications with noise) idea of density‐connect filtering for classification are introduced. The tool’s source codes and other resources have been released on Github, and experimental evaluation was performed through clustering massive taxi trajectory points and Flickr geotagged photos in Beijing, China. The spatial clustering results were compared with those through K‐means and DBSCAN as well. As a spatial clustering tool, HiSpatialCluster is expected to play a fundamental role in big geo‐data research. First, this tool enables clustering adaptively on massive point datasets with uneven spatial density distribution. Second, the density‐connect filter method is applied to generate homogeneous analysis units from geotagged data. Third, the tool is accelerated by both parallel CPU and GPU computing so that millions or even billions of points can be clustered efficiently.

Chen, Yiran↗

Tools for Performing SBG hyperspectral Observing System Simulation Experiment

One of NASA’s Decadal Survey mission, Surface Biology and Geology (SBG), will include a hyperspectral remote sensing imager, which has a very high spatial resolution and a wide spectral coverage (from UV to Near IR). Unprecedented large data volumes will be generated by the SBG hyperspectral instrument. Before the launch of the new satellite, an Observing System Simulation Experiment (OSSE) can be used to study different designs of the new satellite system. One of the key components in an OSSE study is a radiative transfer model (RTM) or forward model. In this presentation, we will describe a Principal Component-based Radiative Transfer Model (PCRTM) which is capable of simulating atmospheric (TOA) radiance or reflectance spectra from far IR to visible and UV spectral regions (50 wavenumber to 30000 wavenumber) quickly and accurately. Multiple scattering from multiple layers of clouds/aerosols are included in the model. The PCRTM has a very good accuracy relative to reference line-by-line radiative transfer models (LBLRTM), and it saves 3-4 orders of magnitude computational time relative to LBLRTM or MODTRAN. The PCRTM model has been successfully used to analyze large volumes of data from hyperspectral sensors such as AIRS, CrIS, and IASI. It has also been used to perform OSSE studies for the Climate Absolute Radiance and Refractivity Observatory (CLARREO) mission. Another useful tool for the OSSE is surface Bidirectional Reflectance Distribution Function (BRDF) database. It is very crucial for the SBG OSSE to include realistic BRDF spectra. Currently, most of the surface reflectance spectra such as those in the ECOSIS and ECOSTRESS are measured at specific observation geometries. We have developed a hyperspectral bidirectional reflectance (HSBR) model which combines Ross-Li BRDF model with the existing reflectance spectral libraries using a principal component analysis. This HSBR model can provide realistic BRDF spectra under various observation conditions. It can also be used to generate realistic BRDF spectra using measurements from multi-band imagers or spectrometers such as MODIS or VIIRS.

Xu Liu↗

Smoothing tool design and performance during subaperture glass polishing

During subaperture tool grinding and polishing, overlaps of the tool influence function can result in undesirable mid-spatial frequency (MSF) errors in the form of surface ripples, which are often corrected using a smoothing polishing step. Here, in this study, flat multi-layer smoothing polishing tools are designed and tested to simultaneously (1) reduce or remove MSF errors, (2) minimize surface figure degradation, and (3) maximize the material removal rate. A time-dependent convergence model in which spatial material removal varies with a workpiece-tool height mismatch, combined with a finite element mechanical analysis to determine the interface contact pressure distribution, was developed to evaluate various smoothing tool designs as a function of tool material properties, thicknesses, pad textures, and displacements. An improvement in smoothing tool performance is achieved when the gap pressure constant, $\overline{h}$ (which describes the inverse rate at which the pressure drops with a workpiece-tool height mismatch), is minimized for smaller spatial scale length surface features (namely, MSF errors) and maximized for large spatial scale length features (i.e., surface figure). Five specific smoothing tool designs were experimentally evaluated. A two-layer smoothing tool using a thin, grooved IC1000 polyurethane pad (with a high elastic modulus, E pad =360 MPa ), thicker blue foam (with an intermediate modulus, E foam =5.3 MPa ) underlayer, and an optimized displacement (d t =1 mm ) provided the best overall performance (namely, high MSF error convergence, minimal surface figure degradation, and high material removal rate).

47 OTHER INSTRUMENTATION↗

Development of a Relay Performance Web Tool for the Mars Network

Modern Mars surface missions rely upon orbiting spacecraft to relay communications to and from Earth systems. An important component of this multi-mission relay process is the collection of relay performance statistics supporting strategic trend analysis and tactical anomaly identification and tracking.

data accountability↗

Performance measurement: A tool for program control

Performance measurement is a management tool for planning, monitoring, and controlling as aspects of program and project management--cost, schedule, and technical requirements. It is a means (concept and approach) to a desired end (effective program planning and control). To reach the desired end, however, performance measurement must be applied and used appropriately, with full knowledge and recognition of its power and of its limitations--what it can and cannot do for the project manager. What is the potential of this management tool? What does performance measurement do that a traditional plan vs. actual technique cannot do? Performance measurement provides an improvement over the customary comparison of how much money was spent (actual cost) vs. how much was planned to be spent based on a schedule of activities (work planned). This commonly used plan vs. actual comparison does not allow one to know from the numerical data if the actual cost incurred was for work intended to be done.

Abell, Nancy↗

The Mission Assessment Post Processor (MAPP): A New Tool for Performance Evaluation of Human Lunar Missions

The National Aeronautics and Space Administration s (NASA) Constellation Program paves the way for a series of lunar missions leading to a sustained human presence on the Moon. The proposed mission design includes an Earth Departure Stage (EDS), a Crew Exploration Vehicle (Orion) and a lunar lander (Altair) which support the transfer to and from the lunar surface. This report addresses the design, development and implementation of a new mission scan tool called the Mission Assessment Post Processor (MAPP) and its use to provide insight into the integrated (i.e., EDS, Orion, and Altair based) mission cost as a function of various mission parameters and constraints. The Constellation architecture calls for semiannual launches to the Moon and will support a number of missions, beginning with 7-day sortie missions, culminating in a lunar outpost at a specified location. The operational lifetime of the Constellation Program can cover a period of decades over which the Earth-Moon geometry (particularly, the lunar inclination) will go through a complete cycle (i.e., the lunar nodal cycle lasting 18.6 years). This geometry variation, along with other parameters such as flight time, landing site location, and mission related constraints, affect the outbound (Earth to Moon) and inbound (Moon to Earth) translational performance cost. The mission designer must determine the ability of the vehicles to perform lunar missions as a function of this complex set of interdependent parameters. Trade-offs among these parameters provide essential insights for properly assessing the ability of a mission architecture to meet desired goals and objectives. These trades also aid in determining the overall usable propellant required for supporting nominal and off-nominal missions over the entire operational lifetime of the program, thus they support vehicle sizing.

Williams, Jacob↗