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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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NASA NTRS1992

LDEF: A bibliography with abstracts

The Long Duration Exposure Facility (LDEF) was a free-flying cylindrical structure that housed self-contained experiments in trays mounted on the exterior of the structure. Launched into orbit from the Space Shuttle Challenger in 1984, the LDEF spent almost six years in space before being recovered in 1990. The 57 experiments investigated the effects of the low earth orbit environment on materials, coatings, electronics, thermal systems, seeds, and optics. It also carried experiments that measured crystals growth, cosmic radiation, and micrometeoroids. This bibliography contains 435 selected records from the NASA aerospace database covering the years 1973 through June of 1992. The citations are arranged within subject categories by author and date of publication.

Gouger, H. Garland↗

DOE OSTI2016

Final Report. Grant DOE DE-FG02-04ER54768

The magnetized spherical implosion campaign funded by this grant is summarized in this progress report. The main goal of this grant was to improve the seed eld generator MIFEDS (Magneto- Inertial Fusion Energy Delivery System) on the OMEGA laser to enable experiments at high elds (> 8 T) and to carry out magnetized spherical implosion experiments to study the e ect of magnetic elds on the fusion yield. New experiments were carried out in the last budget period to study the e ect of higher elds and shaped laser pulses. These new experiments improved the magnetized implosion database and allowed us to improve the con dence of our conclusions with respect to the e ect of magnetic elds on implosion performance. The main conclusion is that adding magnetic eld leads to a 30% higher neutron yield, but using seed magnetic eld higher than 8 T does not further increase the neutron yield. A further conclusion is that the yield enhancement due to the magnetic eld is approximately independent of the laser pulse shape.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

DOE OSTI2014

Standard Energy Efficiency Data Platform

The SEED platform is expected to be a building energy performance data management tool that provides federal, state and local governments, building owners and operators with an easy, flexible and cost-effective method to collect information about groups of buildings, oversee compliance with energy disclosure laws and demonstrate the economic and environmental benefits of energy efficiency. It will allow users to leverage a local application to manage data disclosure and large data sets without the IT investment of developing custom applications. The first users of SEED will be agencies that need to collect, store, and report/share large data sets generated by benchmarking, energy auditing, retro-commissioning or retrofitting of many buildings. Similarly, building owners and operators will use SEED to manage their own energy data in a common format and centralized location. SEED users will also control the disclosure of their information for compliance requirements, recognition programs such as ENERGY STAR, or data sharing with the Buildings Performance Database and/or other third parties at their discretion.

Cheifetz, D.Magnus↗

DOE OSTI2014

Standard Energy Efficiency Data Platform

Cheifetz, D. Magnus↗

DOE OSTI2026

Direct cross section measurement of 102 Pd ⁢(𝛾,𝑝) and 102 Pd ⁢(𝛾,𝛼) for the astrophysical 𝑝 process

Background: A handful of neutron-deficient stable nuclei, known as the “p nuclei,” cannot be produced through astrophysical neutron capture processes. Instead, some of these nuclei are proposed to be produced by 𝛾-induced reactions on existing r- and s-process seeds. The specific astrophysical site or sites are not yet identified, however, with uncertainties in the cross sections of these 𝛾-induced reactions playing a role. Databases of reaction rates for astrophysical simulations often rely on theoretical statistical model calculations, such as Hauser-Feshbach, for rates where no experimental information is known. However, reasonable variations in the choice of parametrizations of various nuclear properties can create order-of-magnitude variations in the final predicted cross sections and reaction rates, which are then propagated through the models to the predicted final abundances. Purpose: To better constrain these statistical model calculations and ultimately reduce the uncertainties from the nuclear physics on our understanding of the p nuclei, a measurement of the cross sections of 𝛾-induced reactions on the p-nucleus 102 Pd was undertaken. This work represents the first measurement of its kind, using segmented silicon detectors to measure prompt charged particle emission from 𝛾-induced reactions. Methods: Quasimonoenergetic gamma beams from the High Intensity 𝛾 Source facility bombarded an enriched 102 Pd target. A segmented silicon array was arranged to detect the particles emitted from (𝛾,𝑝) and (𝛾,𝛼) reactions. Results: Reaction cross sections were deduced at multiple 𝛾-beam energies between 10 and 19 MeV, and compared to statistical model calculations using talys-1.96. The 102 Pd ⁢(𝛾,𝑝)⁢ 101 Rh reaction cross section was reasonably well reproduced by a subset of photon strength functions and level densities, though the strength to the ground state of 101 Rh was underestimated at higher incident gamma energies. The 102 Pd ⁢(𝛾,𝛼)⁢ 98 Ru was in general overpredicted by the various alpha-nucleus optical model potentials. Conclusions: While the theoretical cross sections used to model the (𝛾,𝑝) reactions for the p process may be reasonable, a more careful approach is needed in the case of (𝛾,𝛼). Further work to probe gamma-induced reaction cross sections at and near the p nuclei is warranted.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

NASA NTRSDate not supplied

Populating a Graph Database to Run a Usage-Based Discovery Tool

Most dataset discovery tools for Earth Observation data rely on descriptions and other metadata of the datasets, using keyword searches or attribute filtering to determine relevance. However, these descriptions often do not include the potential uses of the data. Thus, a user working on floods will rarely see few if any rainfall datasets show up in such a search. The Usage Based Discovery tool, on the other hand, offers usage instances to the user, either research articles or applications, along with the datasets that those usage instances used. This allows a user, particularly one new to the world of Earth Observation data, to investigate which datasets are used in similar cases. The information that powers Usage-Based Discovery is a graph database of relationships of usage to dataset and usage to topic, allowing the user to narrow their search for similar cases. In order to scale out to a graph database rich enough to provide a satisfactory user experience, we combine manual and automated processes to populate the graph. The initial content of the graph has been seeded primarily via human-aided data curation methods, using sites like Google Scholar. To scale up this effort, we’ve employed crowdsourcing. It is easy for anyone to contribute to our graph using their Open Researcher and Contributor Identifier for authorization. We’re now experimenting with Machine Learning and Natural Language Processing to help automate population of the graph, starting with the classification of research articles by topic. Finding adequate training data in the absence of a comprehensive and open research article API continues to be a significant challenge.

Vincent Inverso↗

DOE OSTI2019

Robustness of trait connections across environmental gradients and growth forms

Abstract Aim Plant trait databases often contain traits that are correlated, but for whom direct (undirected statistical dependency) and indirect (mediated by other traits) connections may be confounded. The confounding of correlation and connection hinders our understanding of plant strategies, and how these vary among growth forms and climate zones. We identified the direct and indirect connections across plant traits relevant to competition, resource acquisition and reproductive strategies using a global database and explored whether connections within and between traits from different tissue types vary across climates and growth forms. Location Global. Major taxa studied Plants. Time period Present. Methods We used probabilistic graphical models and a database of 10 plant traits (leaf area, specific leaf area, mass‐ and area‐based leaf nitrogen and phosphorous content, leaf life span, plant height, stem specific density and seed mass) with 16,281 records to describe direct and indirect connections across woody and non‐woody plants across tropical, temperate, arid, cold and polar regions. Results Trait networks based on direct connections are sparser than those based on correlations. Land plants had high connectivity across traits within and between tissue types; leaf life span and stem specific density shared direct connections with all other traits. For both growth forms, two groups of traits form modules of more highly connected traits; one related to resource acquisition, the other to plant architecture and reproduction. Woody species had higher trait network modularity in polar compared to temperate and tropical climates, while non‐woody species did not show significant differences in modularity across climate regions. Main conclusions Plant traits are highly connected both within and across tissue types, yet traits segregate into persistent modules of traits. Variation in the modularity of trait networks suggests that trait connectivity is shaped by prevailing environmental conditions and demonstrates that plants of different growth forms use alternative strategies to cope with local conditions.

Flores‐Moreno, Habacuc↗

DOE OSTI2022

The global spectrum of plant form and function: enhanced species-level trait dataset

Here we provide the ‘Global Spectrum of Plant Form and Function Dataset’, containing species mean values for six vascular plant traits. Together, these traits –plant height, stem specific density, leaf area, leaf mass per area, leaf nitrogen content per dry mass, and diaspore (seed or spore) mass – define the primary axes of variation in plant form and function. The dataset is based on ca. 1 million trait records received via the TRY database (representing ca. 2,500 original publications) and additional unpublished data. It provides 92,159 species mean values for the six traits, covering 46,047 species. The data are complemented by higher-level taxonomic classification and six categorical traits (woodiness, growth form, succulence, adaptation to terrestrial or aquatic habitats, nutrition type and leaf type). Data quality management is based on a probabilistic approach combined with comprehensive validation against expert knowledge and external information. Intense data acquisition and thorough quality control produced the largest and, to our knowledge, most accurate compilation of empirically observed vascular plant species mean traits to date.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2013

In search of genome annotation consistency: solid gene clusters and how to use them

Maintaining consistency in genome annotations is important for supporting many computational tasks, particularly metabolic modeling. The SEED project has implemented a process that improves annotation consistencies across microbial genomes for proteins with conserved sequences and genomic context. In this research report, we describe this process and show how this effort has resulted in improvements to microbial genome annotations in the SEED. We also compare SEED annotation consistencies with other commonly used resources such as IMG (the Joint Genome Institute’s Integrated Microbial Genomes system), RefSeq (the National Center for Biotechnology Information’s Reference Sequence Database), Swiss-Prot (the annotated protein sequence database of the Swiss Institute of Bioinformatics, European Molecular Biology Laboratory and the European Bioinformatics Institute) and TrEMBL (Translated European Molecular Biology Laboratory nucleotide sequence data Library). Our analysis indicates that manual and computational efforts are paying off for the databases where consistency is a major goal.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2026

Impact of n > 1 neoclassical tearing modes on fast ions, plasma rotation, and the onset of disruptive tearing modes in DIII-D ITER baseline scenario

We present integrated TRANSP-kick analyses quantitatively characterizing how n > 1 magnetic islands redistribute fast ions (FIs) and modify momentum balance in low-torque DIII-D H-mode scenarios operated with the ITER normalized parameter set and shape (ITER baseline scenario, or IBS). In this plasma scenario, disruptive neoclassical tearing modes (NTMs) are most commonly seeded by nonlinear 3-wave coupling when the differential rotation between the q = 1 and q = 2 surfaces ($δf_{1, 2}$) approaches zero. Analysis of a DIII-D IBS database of shots unstable to the 2/1 NTM demonstrates that the flattening rotation profile is correlated with n > 1 NTM amplitude growth, with a strong drop in $δf_{1, 2}$ occurring when the radial magnetic perturbation amplitude at the rational surface ($δB$ r s ) is estimated to be about 20 G. The interpretive TRANSP-kick simulations show that the experimentally observed reduction in core rotation is due to the fast-ion kicks. Nonlinearity in momentum losses versus NTM amplitude is found to be correlated with overlap of FI island chains, occurring when $δB$ r s is about 35 G, in rough agreement with the experimental results. This agreement suggests the primary mechanism for the conductive momentum loss in the core is due to chaotic FI orbits and FI losses developing from overlapping resonant FI island chains.

ITER baseline scenario↗

DOE OSTI2018

Tundra Trait Team: A database of plant traits spanning the tundra biome

Motivation: The Tundra Trait Team (TTT) database includes field-based measurements of key traits related to plant form and function at multiple sites across the tundra biome. This dataset can be used to address theoretical questions about plant strategy and trade-offs, trait-environment relationships and environmental filtering, and trait variation across spatial scales, to validate satellite data, and to inform earth system model parameters. Main types of variable contained: The database contains 81,537 measurements of 18 plant traits. The most frequently measured traits (>1,000 observations each) include plant height, leaf area, specific leaf area, leaf fresh and dry mass, leaf dry matter content, leaf nitrogen content, leaf carbon content, leaf phosphorus content, seed mass, and stem specific density. Spatial location and grain: Measurements were collected in tundra habitats in both the northern and southern hemispheres, including Arctic sites in Alaska, Canada, Greenland, Fennoscandia, and Siberia and alpine sites in the European Alps, Colorado Rockies, Caucasus, Ural Mountains, Pyrenees, Australian Alps, and Central Otago Mountains (New Zealand). More than 99% of observations are georeferenced. Time period and grain: All data were collected between 1964 and 2016. A small number of sites have repeated trait measurements at two or more time periods. Major taxa and level of measurement: Trait measurements were made on 858 terrestrial vascular plant species growing in tundra habitats. Most observations are on individuals (87%), while a small number represent plot or site means or maximums per species. Software format: csv file and GitHub repository with data cleaning scripts in R; contribution to TRY plant trait database (www.try-db.org) to be included in the next version release.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2011

Experimental characterization of energetic material dynamics for multiphase blast simulation.

Currently there is a substantial lack of data for interactions of shock waves with particle fields having volume fractions residing between the dilute and granular regimes, which creates one of the largest sources of uncertainty in the simulation of energetic material detonation. To close this gap, a novel Multiphase Shock Tube has been constructed to drive a planar shock wave into a dense gas-solid field of particles. A nearly spatially isotropic field of particles is generated in the test section by a gravity-fed method that results in a spanwise curtain of spherical 100-micron particles having a volume fraction of about 19%. Interactions with incident shock Mach numbers of 1.66, 1.92, and 2.02 were achieved. High-speed schlieren imaging simultaneous with high-frequency wall pressure measurements are used to reveal the complex wave structure associated with the interaction. Following incident shock impingement, transmitted and reflected shocks are observed, which lead to differences in particle drag across the streamwise dimension of the curtain. Shortly thereafter, the particle field begins to propagate downstream and spread. For all three Mach numbers tested, the energy and momentum fluxes in the induced flow far downstream are reduced about 30-40% by the presence of the particle field. X-Ray diagnostics have been developed to penetrate the opacity of the flow, revealing the concentrations throughout the particle field as it expands and spreads downstream with time. Furthermore, an X-Ray particle tracking velocimetry diagnostic has been demonstrated to be feasible for this flow, which can be used to follow the trajectory of tracer particles seeded into the curtain. Additional experiments on single spherical particles accelerated behind an incident shock wave have shown that elevated particle drag coefficients can be attributed to increased compressibility rather than flow unsteadiness, clarifying confusing results from the historical database of shock tube experiments. The development of the Multiphase Shock Tube and associated diagnostic capabilities offers experimental capability to a previously inaccessible regime, which can provide unprecedented data concerning particle dynamics of dense gas-solid flows.

36 MATERIALS SCIENCE↗

DOE OSTI2011

Modular Semantic Tagging of Medline Abstracts and its Use in Inferring Regulatory Networks

We describe MedstractPlus, a resource for mining relations from the Medline bibliographic database that is currently under construction. It was built on the remains of Medstract, a previously created resource that included a biorelation server and an acronym database. MedstractPlus uses simple and scalable natural language processing modules to structure text, is designed with reusability and extendibility in mind, and adheres to the philosophy of the Linguistic Annotation Framework. We show how MedstractPlus has been used to provide seeds for a novel approach to inferring transcriptional regulatory networks from gene expression data.

59 BASIC BIOLOGICAL SCIENCES↗

DOE OSTI2018

EUV Spectra and Line Ratios of Multiply Ionized Calcium and Argon Atoms in a Laboratory Plasma

The utility of Ca in the EUV spectral range of astrophysical observations is limited by a fragmentary and incomplete record of laboratory data. In order to obtain a more comprehensive survey of the Ca line emission in the EUV, we have used a tokamak plasma discharge in hydrogen carrying some Ar and intermittently seeded with Ca as a tool for investigating the emission line intensity pattern of highly charged Ca and Ar ions in the wavelength range 100–285 Å with 0.35 Å spectral resolution. Here, we compare our data to wavelengths and line ratios in much-used databases, especially CHIANTI, and we discuss apparent inconsistencies.

79 ASTRONOMY AND ASTROPHYSICS↗

NASA NTRS1991

Mapping crystal defects with a digital scanning ultramicroscope

A computer controlled scanning ultramicroscope has been built to assist in the characterization of transparent crystals. The device measures the scattering of a focused He-Ne laser beam by crystalline defects. As an XYZ translation table moves the crystal under the ultramicroscope, the scattered light is measured by a photodetector whose output is digitized and recorded. From this data, contour maps or three dimensional perspective plots of the scattering regions of the crystal can be generated to assist in finding patterns of defects which might be correlated with perturbations in the growth process. The verified resolution of the present instrument is about 1 micrometer, which is limited by the minimum step of the stepper-motor driven translation stages, optical diffraction effects and the sensitivity of the detector at the laser light frequency. The instrument was used to build a database of defects patterns in commercial laboratory grown triglycine sulphate (TGS) crystals, and to map defects in a TGS crystal grown from aqueous solution during the flight of Spacelab 3. This crystal shows indications of a reduction both in the generation of defects at the seed-new growth interface and in their propagation into the new crystal.

Springer, J. M.↗

DOE OSTI2018

Policy, Permit, Perform: Using City Benchmarking Data and Building Construction Permit History to Identify Energy Performance Improvements

The City of Portland (City) and Multnomah County 2015 Climate Action Plan targets a 40 percent reduction in carbon emissions below 1990 levels by 2030. To reach this goal, the plan includes a key objective to reduce the total energy use of existing buildings by 25 percent. Buildings are responsible for one-half of carbon emissions in Portland, Oregon, U.S., and improving their performance is critical to achieving the City’s climate goals. As part of its climate action planning, the City passed an ordinance on April 22, 2015, requiring commercial buildings 20,000 ft2 and larger to benchmark and disclose annual energy performance metrics through ENERGY STAR® Portfolio Manager® (ESPM), including greenhouse gas emissions, building energy use intensity (EUI) and ENERGY STAR scores. Twenty-five cities in the U.S. have adopted similar policies requiring energy benchmarking. These policies are generating a treasure trove of data about the drivers of building performance, but practitioners are only beginning to link benchmarking data to other datasets to produce actionable insight into improving building performance. In 2016, the City received a financial assistance award from the U.S. Department of Energy (DOE) through the Cities Leading through Energy Analysis and Planning project (Award Number DE-0007737). Portland’s project evaluated the application of the DOE Building Energy Asset Score Tool and rating system developed by Pacific Northwest National Laboratory (PNNL) to commercial buildings that report to the City. The City used building construction permit history to develop Asset Scores for a set of office buildings that reported energy performance for 2015 – the first year the City mandated energy benchmarking and reporting for commercial buildings 50,000 ft2 and larger. The primary project objective was to link energy benchmarking data and commercial building permit data to analyze commercial buildings systems that present the best, specific opportunities to improve energy performance. Integrating these datasets from two City departments, the Bureau of Development Services and the Bureau of Planning and Sustainability, could expand Portland’s use of analytics to inform climate policy decisions and strategic targeting of financial incentives for building owners and managers who are best positioned to improve the performance of their buildings. The project began with the commercial benchmarking data received for 340 commercial buildings that submitted calendar year 2015 energy reports. The City retained Research Into Action and Energy 350 (RIA team) to evaluate this self-reported benchmarking data. Based on a survey of 53 building managers, the RIA team found that most respondents used the City’s compliance tools, including a How-to Guide and Help Desk, and found access to utility data to be straightforward. However, almost one-third of the respondents encountered challenges when estimating the gross floor area (GFA), and some experienced confusion regarding the input of property use types and details into ESPM. Based on the RIA team’s recommendations, the City refined its How-to Guide, created online answers to frequently asked questions, and hosted office hour sessions to help building managers accurately characterize their building’s physical characteristics and operations in ESPM. Concurrently with the RIA team’s evaluation, the City worked with PNNL to estimate DOE Asset Score Preview (Preview) scores for 181 of the 340 commercial buildings that submitted ESPM reports to the City. Asset Score Tool is a web-based tool developed by PNNL for DOE to evaluate and rate the as-built energy efficiency of a building. Asset Score Tool’s full analysis capability runs a detailed energy model based on building geometry, age, envelope, lighting and mechanical systems using standard operating assumptions to give the building a score, similar to a miles per gallon rating for a car. Preview, a simplified deployment of the full Asset Score Tool, provides a preliminary score range using only seven data points, six of which are readily available in the ESPM benchmarking data. Analysis of the combined Preview scores and the operational ESPM scores identified buildings with a high potential for energy improvements through either retro-commissioning and retuning of existing operations or capital investments into building systems. The City contracted Whole Building Solutions (WBS) to mine building permit history and develop full Asset Scores for a subset of 26 office buildings that were eligible for both ENERGY STAR scores and Asset Scores. WBS researched permits and building plans to identify mechanical, lighting and envelope systems and other building characteristics necessary to complete Asset Scores. This historical data was recorded using the web-based Asset Score Tool, which evaluates the as designed energy efficiency of existing buildings. Much of this City information was available online after 2010; however, WBS had to search through microfiche files and the City’s database to obtain permit and plan history prior to 2010. Although building geometry, mechanical system type and basic envelope information was consistently identifiable, WBS found permit data gaps that prevented complete and accurate Asset Scores for most of the office buildings. If the City decides to develop Asset Scores based on building permit information in the future, WBS recommended requiring lighting plans, control diagrams and as-built drawings that reflect how the buildings are actually constructed. In addition, WBS recommended uploading plans and permits from microfiche storage into a more comprehensive, searchable database consistent with the City’s current online permit information. To identify the actual lighting types, WBS and City staff conducted site visits of all 26 office buildings. As part of managing the flow of ESPM and Asset Score data for the project, Earth Advantage, a sub-recipient of the Cities-LEAP award, created a DOE Standard Energy Efficiency Data (SEED) (USDOE 2018) instance for the City and used Asset Score’s Application Programming Interface (API) (Asset Score 2018) capabilities to develop two new features in the SEED Platform™: (1) automated Asset Score Preview ranges calculated based on benchmarking data and the City’s estimate of number of building floors; and (2) storage of full Asset Score information. Leveraging the construction permit history and site visit information for the 26 office buildings, The Cadmus Group (Cadmus) analyzed benchmarking data and Asset Score information to identify opportunities and drivers to improve performance. Correlation and regression analysis of the combined dataset was completed to determine whether building operations or specific systems – mechanical, lighting or envelope – present the best opportunities to improve energy performance. The central outcome of this project was Cadmus’ detailed analysis of the richer dataset that was created by combining the City of Portland’s commercial building permit activity and building-specific energy performance information based on metrics from ESPM and Asset Score Tool. Some of their findings collaborate with well-known facts, such as buildings with less efficient lighting systems are good targets for efficiency improvements through lighting upgrades. This analysis also helped identify that individual heating, ventilation, and air conditioning (HVAC) equipment efficiency does not necessarily correlate with building performance. However, overall HVAC system performance, as measured with the Total System Performance Ratio (TSPR) metric, is a better indicator of building performance (Goel et al. 2014). As a metric, TSPR considers whole system performance that includes equipment efficiency and system controls, such as resets for static pressure and chilled water setpoints, which can be more effective and financially feasible options for improving building performance. Given the high cost associated with envelope retrofits, opportunities to upgrade envelope insulation are likely to be limited. However, buildings with single-pane and non-thermal break windows are good candidates for window replacements, such as upgrading to double-pane windows with thermal breaks. This research project determined that developing Asset Scores based on site visits is preferable to mining City building permit data. In addition, the use of benchmarking data to develop Asset Score Preview Scores is recommended as a first step in engaging building managers to develop full Asset Scores. Asset Score Tool outputs can help building managers quickly identify opportunities for improvement and then work with the utility incentive administrator and energy service providers to develop their retrofit plan. Where full Asset Scores are available, analysis using a quadrant matrix with ENERGY STAR scores is recommended to identify buildings that present the best opportunities for operational-behavioral improvements versus ones with opportunities for upgrades to physical building systems. This workflow and the tools will help cities, utility incentive administrators, building portfolio managers and energy service providers develop energy programs and strategies for screening and analysis of buildings with the greatest energy savings potential. This report describes the project approach and research results to inform future coordination of ESPM and Asset Score data, including the use of benchmarking data to generate Preview scores. Given better awareness of energy performance, building managers can make more informed decisions to reduce energy consumption and carbon emissions. With cities, states and jurisdictions adopting benchmarking and auditing ordinances, there are substantial amounts of data submitted to cities that could be used to inform investments in energy efficiency.

29 ENERGY PLANNING, POLICY, AND ECONOMY↗

DOE OSTI2026

SEED: Semantic Energy Exploration and Discovery

The Bioenergy Knowledge Discovery Framework (KDF) hosts a vast repository of specialized data, yet traditional keyword-based search methods often struggle to provide direct answers, requiring significant domain expertise and manual effort to filter through raw documents. To overcome these barriers, this software introduces a semantic search engine that enables both specialists and non-specialists to query the KDF using natural language. By shifting from rigid keyword matching to intent-based retrieval, the tool automatically identifies and ranks the most relevant sources within the database. The system functions by processing natural language queries to extract the most pertinent information, delivering an AI-generated plain-language summary alongside exact supporting quotes from retrieved documents. This integrated approach provides users with immediate, evidence-based answers while eliminating the need for exhaustive manual review. By surfacing direct insights and contextual evidence, the software enhances the usability of existing KDF resources and democratizes access to complex bioenergy data. Ultimately, this semantic search solution accelerates the discovery process and supports faster, more informed decision-making across the bioenergy sector.

Pan, Meiyu (Melrose) [Oak Ridge National Laborator↗

DOE OSTI2023

3P Program: Phenotyping X Prediction = Productivity (Final Scientific/Technical Report)

The goal of the 3P Program was to establish integrated, real-time phenotyping and to analyze above- and below-ground plant architecture and total carbon partitioning and allocation to predict heterosis and develop superior crop hybrids by fully leveraging the Sorghum gene pool. There were two overarching themes: 1) the development of a new crop improvement approach utilizing advances in high-throughput phenotyping (HTP), computing, and genomics for public dissemination and 2) leveraging this platform for sorghum crop improvement and commercialization. The Clemson team worked on creating genomic resources and using both statistical learning and high-throughput phenotyping in genomics-assisted breeding. Research was broadly interested in the genetics of carbon partitioning, with the aim of improving crop performance and achieving sustainability. The technology and resources created can be readily found in the public domain and serve to advance scientific understanding of crop genomics and breeding. Genomic prediction was able to identify top crosses to be made, and a hybrid prediction pipeline is in place to drive year-over-year genetic gain. Roots have long been ignored by plant breeders and agronomists, not because they are unimportant but because they are hard to measure. This is an untapped white space of potential insight and innovation. To address this, Hi Fidelity Genetics developed the RootTracker to measure roots in the field on a continuous basis. A database system called RootTracker Tracker was developed to handle data coming from the RootTrackers. In using this device, valuable data was observed for plant breeding, hydrochemical development, and other agricultural biology applications. Carnegie Mellon’s goal was developing new techniques to generate high-resolution 3D models of plants from data collected in the field. The idea was that more useful and more informative phenotypes could be extracted by resolving small features, such as seeds and flowers, and that by modeling in 3D, the spatial structure of plants could be examined. To achieve this, multiple images collected by a new small format structured light stereo imager were fused together. A sorghum panicle modeling pipeline was developed to allow the collection and processing of data. Carolina Seed Systems is an agricultural technology company focused on decarbonizing the agricultural system. Their technology pipeline serves to drive fundamental progress towards creation and distribution of carbon negative crops. The genomic and the engineering technology developed through the 3P Program was leveraged to deliver both value and sustainability from the grower to the consumer. Promising sorghum hybrids were scaled up and commercialized. The overall goal of our research was to integrate, create, and deploy genetic and engineering concepts and technologies to enhance crop productivity in a sustainable fashion. The combination of public and private partners allowed the basic research and hypothesis testing to be quickly accelerated for commercial application by the companies yet maintained that the core framework and academic insights remain in the public domain for continued market disruption, competition, and innovation.

59 BASIC BIOLOGICAL SCIENCES↗