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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 55 records · Page 3
All sourcesNASA NTRSDOE OSTI
NASA NTRS1994

Some Problems and Solutions in Transferring Ecosystem Simulation Codes to Supercomputers

Many computer codes for the simulation of ecological systems have been developed in the last twenty-five years. This development took place initially on main-frame computers, then mini-computers, and more recently, on micro-computers and workstations. Recent recognition of ecosystem science as a High Performance Computing and Communications Program Grand Challenge area emphasizes supercomputers (both parallel and distributed systems) as the next set of tools for ecological simulation. Transferring ecosystem simulation codes to such systems is not a matter of simply compiling and executing existing code on the supercomputer since there are significant differences in the system architectures of sequential, scalar computers and parallel and/or vector supercomputers. To more appropriately match the application to the architecture (necessary to achieve reasonable performance), the parallelism (if it exists) of the original application must be exploited. We discuss our work in transferring a general grassland simulation model (developed on a VAX in the FORTRAN computer programming language) to a Cray Y-MP. We show the Cray shared-memory vector-architecture, and discuss our rationale for selecting the Cray. We describe porting the model to the Cray and executing and verifying a baseline version, and we discuss the changes we made to exploit the parallelism in the application and to improve code execution. As a result, the Cray executed the model 30 times faster than the VAX 11/785 and 10 times faster than a Sun 4 workstation. We achieved an additional speed-up of approximately 30 percent over the original Cray run by using the compiler's vectorizing capabilities and the machine's ability to put subroutines and functions "in-line" in the code. With the modifications, the code still runs at only about 5% of the Cray's peak speed because it makes ineffective use of the vector processing capabilities of the Cray. We conclude with a discussion and future plans.

Skiles, J. W.↗
NASA NTRS2005

OpenMP Performance on the Columbia Supercomputer

This presentation discusses Columbia World Class Supercomputer which is one of the world's fastest supercomputers providing 61 TFLOPs (10/20/04). Conceived, designed, built, and deployed in just 120 days. A 20-node supercomputer built on proven 512-processor nodes. The largest SGI system in the world with over 10,000 Intel Itanium 2 processors and provides the largest node size incorporating commodity parts (512) and the largest shared-memory environment (2048) with 88% efficiency tops the scalar systems on the Top500 list.

Haoqiang, Jin↗
NASA NTRS1993

Computer Electromagnetics and Supercomputer Architecture

The dramatic increase in performance over the last decade for microporcessor computations is compared with that for the supercomputer computations. This performance, the projected performance, and a number of other issues such as cost and the inherent pysical limitations in curent supercomputer technology have naturally led to parallel supercomputers and ensemble of interconnected microprocessors.

Electromagnetics Microprocessors Computers↗
NASA NTRS2015

Supercomputing in the Age of Discovering Superearths, Earths and Exoplanet Systems

With the Kepler Mission, exoplanet science has entered the era of Big Data and has benefited tremendously from the availability of the NAS (NASA Advanced Supercomputing Division) Pleiades supercomputer. This presentation provides an overview of the history of exoplanet discoveries and highlights the key enabling technologies for Kepler. I provide an overview of the Kepler science pipeline and the algorithms used to analyze the data and detect transiting planets, all of which run routinely on the NAS Pleiades system. The presentation also provides a description of the Blender analysis program used to validate Kepler planet discoveries statistically, and the effort to discover exomoons lurking in Kepler data, both of which also run on Pleiades. Finally, I describe NASA's TESS (Transiting Exoplanet Survey Satellite) Mission, which leverages Kepler heritage to provide a science pipeline similar to that for Kepler and that will also run routinely on the NAS Pleiades supercomputer.

big data↗
DOE OSTI2023

Quantum-centric Supercomputing for Materials Science: A Perspective on Challenges and Future Directions

Computational models are an essential tool for the design, characterization, and discovery of novel materials. Hard computational tasks in materials science stretch the limits of existing high-performance supercomputing centers, consuming much of their simulation, analysis, and data resources. Quantum computing, on the other hand, is an emerging technology with the potential to accelerate many of the computational tasks needed for materials science. In order to do that, the quantum technology must interact with conventional high-performance computing in several ways: approximate results validation, identification of hard problems, and synergies in quantum-centric supercomputing. In this paper, we provide a perspective on how quantum-centric supercomputing can help address critical computational problems in materials science, the challenges to face in order to solve representative use cases, and new suggested directions.

Alexeev, Yuri↗
DOE OSTI2024

Thermo-Fluid Modeling Framework for Supercomputer Digital Twins: Part 1, Demonstration at Exascale

A thermo-fluid modeling framework is being developed for ExaDigiT---an open-source framework for developing comprehensive digital twins of liquid-cooled supercomputers. The work is being conducted in two parts, and discussion is divided into two companion papers. The work documented in this paper focuses on the development of a cooling system library in Dymola for the Frontier supercomputer at Oak Ridge National Laboratory. The second part, outlined in a companion paper, focuses on a templating structure called Auto-CSM for easily creating model-agnostic, physics-based thermo-fluid cooling system models for liquid-cooled supercomputers using a text-based schema. The cooling model is being developed using primarily the open-source Transient Simulation Framework of Reconfigurable Models (TRANSFORM) library. The library follows the templating architecture developed within the TRANSFORM library for modeling subsystems. A full-system validation was performed to validate a very simple model that is integrated with the system controls, and the results are presented herein.

Kumar, Vineet↗
DOE OSTI2026

Evaluation of Best Practices in Mitigating Startup Costs on Leadership-Class Supercomputers

Supercomputers at Department of Energy (DOE) National Laboratories face a widening range of workloads, from traditional modeling and simulation to Artificial Intelligence model training or complex multi-stage workflows, and beyond. At DOE Leadership Computing Facilities like the Oak Ridge Leadership Computing Facility (OLCF), these workloads demand concurrent access to large portions of the supercomputer’s resources. Launching a job across massive supercomputers is challenging from the start; the file system struggles with a large backlog of metadata requests as tens of thousands of processes read thousands of the same files, and the compute job cannot start until this is completed. There are multiple existing approaches to calm this metadata storm, ranging from vendor-developed tools like sbcast to National Laboratory-developed tools like Spindle and Copper. In this paper, we benchmark and discuss three common approaches to improving compute job launch latencies on Frontier: Slurm’s sbcast tool, Spindle, and Copper. We evaluate these tools by measuring the launch latencies of four workloads: OSU Microbenchmark’s osu_init, Pynamic, Python import mpi4py, and Python import torch. We provide discussion of the results, highlighting data that meet expectations and that do not meet expectations.

Hagerty, Nick [ORNL] (ORCID:0000000330014414)↗
DOE OSTI2025

Predicting the Future of Supercomputing

The need to solve high-complexity problems using large-scale tightly coupled computing (that is, supercomputing) continues to grow. Here, in this article, we address the needs, challenges, and opportunities for supercomputing over the next decade.

97 MATHEMATICS AND COMPUTING↗
NASA NTRS2017

NASA Advanced Supercomputing Facility Expansion

The NASA Advanced Supercomputing (NAS) Division enables advances in high-end computing technologies and in modeling and simulation methods to tackle some of the toughest science and engineering challenges facing NASA today. The name "NAS" has long been associated with leadership and innovation throughout the high-end computing (HEC) community. We play a significant role in shaping HEC standards and paradigms, and provide leadership in the areas of large-scale InfiniBand fabrics, Lustre open-source filesystems, and hyperwall technologies. We provide an integrated high-end computing environment to accelerate NASA missions and make revolutionary advances in science. Pleiades, a petaflop-scale supercomputer, is used by scientists throughout the U.S. to support NASA missions, and is ranked among the most powerful systems in the world. One of our key focus areas is in modeling and simulation to support NASA's real-world engineering applications and make fundamental advances in modeling and simulation methods.

NASA↗
NASA NTRS2017

Expanding a Supercomputer Facility Using Modular Data Center Technology

With the expansion of high-end computing resources needed to support NASA's increasing demands for physics-based simulations, the facility housing Pleiades-the agency's largest supercomputer-recently reached its power and cooling capacity. In response, the NASA Advanced Supercomputing Division at Ames Research Center undertook a prototype project that resulted in a new facility based on modular data center technology. The facility, a ~1000 square-foot module on a concrete pad with room for 16-18 compute racks, was completed in fall 2016 and an SGI computer system, named Electra, was deployed there in early 2017. Cooling is performed via an evaporative system built into the module, and preliminary experience shows a Power Usage Effectiveness (PUE) of ~1.03. Electra achieved over a petaflop on the LINPACK benchmark, sufficient to rank number 96 on the November 2016 TOP500 list. The system consists of 1,152 InfiniBand-connected Intel Xeon Broadwell-based nodes. Its users access their files on a facility wide file system shared by all compute assets via Mellanox MetroX InfiniBand extenders, which connect the Electra fabric to Lustre routers InfiniBand fabric over fiber-optic links about 300 meters long. The prototype has exceeded expectations and is serving as a blueprint for future expansions.*†

Facility↗
DOE OSTI2019

Aurora: Argonne’s Next-Generation Exascale Supercomputer

Argonne National Laboratory’s next-generation supercomputer, Aurora, will be one of the world’s first exascale systems when it arrives in 2021. The exascale supercomputer, developed in partnership with Intel and Cray, will dramatically accelerate scientific discovery and usher in new technological capabilities, furthering the United States’ scientific leadership position globally. Aurora will be housed at the Argonne Leadership Computing Facility, a U.S. Department of Energy Office of Science User Facility and a premier source of world-class computing resources for open science research since 2006.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2019

Performance analysis and optimization for scalable deployment of deep learning models for country-scale settlement mapping on Titan supercomputer

Here, we present a scalable object detection workflow for detecting objects, such as settlements, from remotely sensed (RS) imagery. We have successfully deployed this workflow on Titan supercomputer and utilized it for the task of mapping human settlement at a country scale. The performance of various stages in the workflow was analyzed before making it operational. The workflow implemented various strategies to address issues such as suboptimal resource utilization and long-tail effects due to unbalanced image workload, data loss due to runtime failures, and maximum wall-time constraints imposed by Titan's job scheduling policy. A mean shift clustering–based static load balancing strategy was implemented, which partitions the image load such that each partition contained similar-sized images. Furthermore, a checkpoint-restart strategy was added in the workflow as a fault-tolerance mechanism to prevent the data losses due to unforeseen runtime failures. The performance of the above-mentioned strategies was observed in various scenarios, such as node failure, exceeding wall time, and successful completion. Using this workflow, we have examined an RS data set that has a spatial resolution of 0.31 m and is comprised of 685 675 km 2 of area of the Republic of Zambia in under six hours using 5426 nodes of the Titan supercomputer.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2022

Enabling power measurement and control on Astra: The first petascale Arm supercomputer

Astra, deployed in 2018, was the first petascale supercomputer to utilize processors based on the ARM instruction set. The system was also the first under Sandia's Vanguard program which seeks to provide an evaluation vehicle for novel technologies that with refinement could be utilized in demanding, large-scale HPC environments. In addition to ARM, several other important first-of-a-kind developments were used in the machine, including new approaches to cooling the datacenter and machine. Here we document our experiences building a power measurement and control infrastructure for Astra. While this is often beyond the control of users today, the accurate measurement, cataloging, and evaluation of power, as our experiences show, is critical to the successful deployment of a large-scale platform. While such systems exist in part for other architectures, Astra required new development to support the novel Marvell ThunderX2 processor used in compute nodes. In addition to documenting the measurement of power during system bring up and for subsequent on-going routine use, we present results associated with controlling the power usage of the processor, an area which is becoming of progressively greater interest as data centers and supercomputing sites look to improve compute/energy efficiency and find additional sources for full system optimization.

97 MATHEMATICS AND COMPUTING↗
DOE OSTI2018

Supercomputers, Clouds and Grids powered by BigPanDA for Brain studies

The PanDA WMS - Production and Distributed Analysis Workload Management System - has been developed and used by the ATLAS experiment at the LHC (Large Hadron Collider) for all data processing and analysis challenges. BigPanDA is an extension of the PanDA WMS to run ATLAS and non-ATLAS applications on Leadership Class Facilities and supercomputers, as well as traditional grid and cloud resources. The success of the BigPanDA project has drawn attention from other compute intensive sciences such as biology. In 2017, a pilot project was started between BigPanDA and the Blue Brain Project (BBP) of the Ecole Polytechnique Federal de Lausanne (EPFL) located in Lausanne, Switzerland. This proof of concept project is aimed at demonstrating the efficient application of the BigPanDA system to support the complex scientific workflow of the BBP, which relies on using a mix of desktop, cluster and supercomputers to reconstruct and simulate accurate models of brain tissue.

Computer Science↗
DOE OSTI2025

Scaling Ultrahigh-Resolution E3SM Land Model for Leadership-Class Supercomputers

This paper presents advancements in scaling the ultrahigh-resolution E3SM Land Model (uELM) for deployment on leadership-class supercomputers, addressing the increased demand for km-scale Earth system modeling. By focusing on km-scale ELM simulations, we enhance predictive capabilities for climate interactions, facilitating improved responses to climate change impacts on energy systems, agriculture, and water resources. Our approach leverages innovative software architecture optimizations, sophisticated data handling techniques, and advanced parallel processing, achieving strong scalability on two leadership supercomputers (2400 nodes (105,600 cores) on Summit, and 1200 nodes (76,800 cores) on Frontier). Results from extensive scalability assessments on the Summit and Frontier also demonstrate outstanding I/O performance (close to 400 GB/s write throughput) and the model's ability to efficiently handle increasing computational demands. This study not only establishes uELM's capability for high-resolution simulations over vast geographical domains, but also sets a foundation for future Earth system modeling breakthroughs.

Wang, Dali [ORNL] (ORCID:0000000168065108)↗
DOE OSTI2020

Understanding the Interplay between Hardware Errors and User Job Characteristics on the Titan Supercomputer

Designing dependable supercomputers begins with an understanding of errors in real-world, large-scale systems. The Titan supercomputer at Oak Ridge National Laboratory provides a unique opportunity to investigate errors when an actual system is actively used by multiple concurrent users and workloads from diverse domains at varying scales. This study presents a thorough analysis of 6, 908, 497 hardware errors from 18, 688 compute nodes of Titan for 312, 215 user jobs over a 3-year time period. Through careful joining of two system logs – the Machine Check Architecture (MCA) log and the job scheduler log – we show the correlated pattern of hardware errors for each job and user, in addition to individual descriptive statistics of errors, jobs, and users. Since the majority of hardware errors are memory errors, this study also shows the importance of error correcting in memory systems.

Lim, Seung-Hwan↗
DOE OSTI2022

Proteome-scale Deployment of Protein Structure Prediction Workflows on the Summit Supercomputer

Deep learning has contributed to major advances in the prediction of protein structure from sequence, a fundamental problem in structural bioinformatics. With predictions now approaching the accuracy of crystallographic experiments, and with accelerators like GPUs and TPUs making inference using large models rapid, genome-level structure prediction becomes an obvious aim. Leadership-class computing resources can be used to perform genome-scale protein structure prediction using state-of-the-art deep learning models, providing a wealth of new data for systems biology applications. Here we describe our efforts to efficiently deploy the AlphaFold v.2 program, for full-proteome structure prediction, at scale on the Oak Ridge Leadership Computing Facility's resources, including the Summit supercomputer. We performed inference to produce the predicted structures for 40,526 protein sequences, corresponding to four prokaryotic proteomes and one plant proteome, using under 4,400 total Summit node hours, equivalent to using the majority of the supercomputer for a little over one hour. We also designed an optimized structure refinement that reduced the time for the relaxation stage of the AlphaFold pipeline by over 10X for longer sequences. We demonstrate the types of analyses that can be performed on proteome-scale collections of sequences, including a search for novel quaternary structures and implications for functional annotation.

Gao, Mu↗