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At least 55 records · Page 3

Thermal modeling of comet Kopff: Implications for the CRAF mission

A thermal model of periodic comet Kopff was developed to aid in planning for the Comet Rendezvous Asteroid Flyby mission. The model is based on the comet nucleus model, which estimates the surface temperature distribution and sublimation rates on a rotating icy sphere in heliocentric orbit. The model results are compared with the observed gas production rates from Kopff in 1983. It is found that approximately 15 percent of the sunlit nucleus surface is active, a relatively high fraction for a typical short-period comet. This suggests that the actual nucleus radius may be larger than the model value. The slope of the observed gas production curve with heliocentric distance is steeper than that predicted by the thermal model. This may indicate the existence of a more complex process than direct sublimation of surface ices, such as gas diffusion through a nonvolatile insulating crust.

Weissman, Paul↗

A new model for Mars atmospheric dust based upon analysis of ultraviolet through infrared observations from Mariner 9, Viking, and Phobos

We propose key modifications to the Toon et al. (1977) model of the particle size distribution and composition of Mars atmospheric dust, based on a variety of spacecraft and wavelength observations of the dust. A much broader (r(sub eff) variance approximately 0.8 micrometers), smaller particle size (r(sub mode) approximately 0.02 micrometers) distribution coupled with a 'palagonite-like' composition is argued to fit the complete ultraviolet-to-30-micrometer absorption properties of the dust better than the montmorillonite-basalt, r(sub eff) variance = 0.4 micrometers, r(sub mode) = 0.40 dust model of Toon et al. Mariner 9 (infrared interferometer spectrometer) IRIS spectra of high atmospheric dust opacities during the 1971-1972 Mars global dust storm are analyzed in terms of the Toon et al. dust model, and a Hawaiian palagonite sample (Rousch et al., 1991) with two different size distribution models incorporating smaller dust particle sizes. Viking Infrared Thermal Mapper (IRTM) emmission-phase-function (EPF) observations at 9 micrometers are analyzed to retrieve 9-micrometer dust opacities coincident with solar band dust opacities obtained from the same EPF sequences (Clancy and Lee, 1991). These EPF dust opacities provide an independent measurement of the visible/9-micrometer extinction opacity ratio (greater than or = 2) for Mars atmospheric dust, which is consistent with a previous measurement by Martin (1986). Model values for the visible/9-micrometer opacity ratio and the ultraviolet and visible single-scattering albedos are calculated for the palagonite model with the smaller particle size distributions compared to the same properties for the Toon et al. model of dust. The montmorillonite model of the dust is found to fit the detailed shape of the dust 9-micrometer absorption well. However, it predicts structured, deep aborptions at 20 micrometers which are not observed and requires a separate ultraviolet-visible absorbing component to match the observed behavior of the dust in this wavelength region. The modeled palagonite does not match the 8-to 9-micrometer absorption presented by the dust in the IRIS spectra, probably due to its low SiO2 content (31%). However, it does provide consistent levels of ultraviolet/visible absorption, 9-to 12-micrometer absorption, and a lack of structured absorption at 20 micrometers. The ratios of dust extinction opacities at visible, 9 micrometers, and 30 micrometers are strongly affected by the dust particle size distribution. The Toon et al. dust size distribution (r(sub mode) = 0.40,r(sub eff) variance = 0.4 micrometers, r(sub cwmu) = 2.7 micrometers) predicts the correct ratio of the 9- to 30-micrometer opacity, but underpredicts the visible/9-micrometer opacity ratio considerably (1 versus greater than or = 2). A similar particle distribution width with smaller particle sizes (r(sub mode) = 0.17, r(sub eff) variance = 0.4 micrometers, r(sub cwmu) = 1.2 micrometers) will fit the observed visible/9-micrometer opacity ratio, but overpredicts the observed 9-micrometer/30-micrometer opacity ratio. A smaller and much broader particle size distribution (r(sub mode) = 0.002, r(sub eff) variance = 0.8 micrometers, r(sub cwmu) = 1.8 micrometers) can fit both dust opacity ratios. Overall, the nanocrystalline structure of palagonite coupled with a smaller, broader distribution of dust particle sizes provides a more consistent fit than the Toon et al. model of the dust to the IRIS spectra, the observed visible/9-micrometer dust opacity ratio, the Phobos occulation measurements of the dust particle sizes (Chassefiere et al., 1992), and the weakness of surface near IR absorptions expected for clay minerals (Clark, 1992; Bell and Crisp, 1993).

Clancy, R. T.↗

A new model for Mars atmospheric dust based upon analysis of ultraviolet through infrared observations from Mariner 9, Viking, and Phobos

We propose key modifications to the Toon et al. (1977) model of the particle size distribution and composition of Mars atmospheric dust, based on a variety of spacecraft and wavelength observations of the dust. A much broader (r(sub eff)variance-0.8 micron), smaller particle size (r(sub mode)-0.02 microns) distribution coupled with a "palagonite-like" composition is argued to fit the complete ultraviolet-to-30-micron absorption properties of the dust better than the montmorillonite-basalt r(sub eff)variance= 0.4 micron, r(sub mode)= 0.40 micron dust model of Toon et al. Mariner 9 (infrared interferometer spectrometer) IRIS spectra of high atmospheric dust opacities during the 1971 - 1972 Mars global dust storm are analyzed in terms of the Toon et al. dust model, and a Hawaiian palagonite sample with two different size distribution models incorporating smaller dust particle sizes. Viking Infrared Thermal Mapper (IRTM) emission-phase-function (EPF) observations at 9 microns are analyzed to retrieve 9-micron dust opacities coincident with solar band dust opacities obtained from the same EPF sequences. These EPF dust opacities provide an independent measurement of the visible/9-microns extinction opacity ratio (> or equal to 2) for Mars atmospheric dust, which is consistent with a previous measurement by Martin (1986). Model values for the visible/9-microns opacity ratio and the ultraviolet and visible single-scattering albedos are calculated for the palagonite model with the smaller particle size distributions and compared to the same properties for the Toon et al. model of dust. The montmorillonite model of the dust is found to fit the detailed shape of the dust 9-micron absorption well. However, it predicts structured, deep absorptions at 20 microns which are not observed and requires a separate ultraviolet-visible absorbing component to match the observed behavior of the dust in this wavelength region. The modeled palagonite does not match the 8- to 9-micron absorption presented by the dust in the IRIS spectra, probably due to its low SiO2 content (31%). However, it does provide consistent levels of ultraviolet/visible absorption, 9- to 12-micron absorption, and a lack of structured absorption at 20 microns. The ratios of dust extinction opacities at visible, 9 microns, and 30 microns are strongly affected by the dust particle size distribution. The Toon et al. dust size distribution (r(sub mode)= 0.40, r(sub eff)variance= 0.4 microns, r(sub cw mu)= 2.7 microns) predicts the correct ratio of the 9- to 30-micron opacity, but underpredicts the visible/9-micron opacity ratio considerably (1 versus > or equal to 2). A similar particle distribution width with smaller particle sizes (r(sub mode)= 0.17, r(sub eff)variance= 0.4 microns, r(sub cw mu)=1.2 microns) will fit the observed visible/9-micron opacity ratio, but overpredicts the observed 9-micron/30-micron opacity ratio. A smaller and much broader particle size distribution (r(sub mode)= 0.02, r(sub eff)variance= 0.8 microns, r(sub cw mu)= 1.8 microns) can fit both dust opacity ratios. Overall, the nanocrystalline structure of palagonite coupled with a smaller, broader distribution of dust particle sizes provides a more consistent fit than the Toon et al. model of the dust to the IRIS spectra, the observed visible/9-micron dust opacity ratio, the Phobos occultation measurements of dust particle sizes, and the weakness of surface near IR absorptions expected for clay minerals.

Clancy, R. T.↗

Direct measurements of ozone and nitrogen dioxide photolysis rates in the troposphere

The photolysis frequencies of ozone and nitrogen dioxide were measured under a variety of conditions commonly found in the troposphere. Ozone photolysis frequencies show a strong dependence on solar zenith angle, overhead ozone column, and temperature, but only a weak dependence on altitude (when only downward radiation is detected). Nitrogen dioxide photolysis frequencies also show strong dependence on solar zenith angle, but show little dependence on temperature, pressure, or altitude. Both j values are strongly affected by cloud cover, but aerosol loading has much less effect. The disagreement of measured j(O3) and j(NO2) with many modeled values, especially disagreement over altitude dependence, shows that atmospheric UV radioactive processes are complicated and poorly understood, although experimental conditions may not always be applicable to conditions modeled.

Dickerson, R. R.↗

Scale Closure in Upper Ocean Optical Properties: From Single Particles to Ocean Color

Predictions of chlorophyll concentration from satellite ocean color are an indicator of primary productivity, with implications for foodwebs, fisheries, and the global carbon cycle. Models describing the relationship between optical properties and chlorophyll do not account for much of the optical variability observed in natural waters, because of the presence of seawater constituents that do not covary with phytoplankton pigments. in order to understand variability in these models, the optical contributions of seawater constituents were investigated. A combination of Mie theory and flow cytometry was used to determine the diameter, complex refractive index, and optical cross-sections of individual particles. In New England continental shelf waters, eukaryotic phytoplankton were the main particle contributors to absorption and scaftering. Minerals were the main contributor to backscattering (bb) in the spring, whereas in the summer both minerals and detritus contributed to bb. Synechococcus and heterotrophic bacteria were relatively unimportant optically. Seasonal differences in the spectral shape of remote sensing reflectance, Rrs, were contributed to approximately equally by eukaryotic phytoplankton absorption, dissolved absorption, and non-phytoplankton bb. Differences between measurements of bb and Prs and modeled values based on chlorophyll concentration were caused by higher dissolved absorption and non-phytoplankton bb than were assumed by the model.

Green, Rebecca E.↗

Search for Associated Production of a Higgs Boson and Two Vector Bosons via Vector-Boson Scattering at s = 13 TeV

A search for Higgs boson ( H ) production in association with two vector bosons ( V = W , Z ) via vector-boson scattering (VBS) is presented using proton-proton collision data collected at s = 13 TeV by the CMS experiment, corresponding to an integrated luminosity of 138 fb - 1 . Events containing two forward jets consistent with VBS, a large-radius jet from the decay of a boosted H to a pair of b quarks, and zero, one, or two charged leptons coming from V decays are selected. The process is excluded at 95% confidence level for observed (expected) values of the V V H H coupling modifier κ 2 V outside the interval 0.40 < κ 2 V < 1.60 ( 0.34 < κ 2 V < 1.66 ), assuming standard model values for all other couplings, thus establishing a novel probe of the V V H H interaction. Constraints are also set on the individual κ 2 W and κ 2 Z coupling modifiers and on the allowed region in the κ 2 W - κ 2 Z plane.

Hayrapetyan, Aram [Yerevan Phys. Inst.]↗

The derivation of Halley parameters from observations

Nominal value model parameters for the nucleus (size, mass, rotation, albedo, hydrogen production) the dust and gas for P/Halley at 0.9 AU postperihelion are derived from the light curve and spectra of Halley and by modeling the effect of the nongravitational forces, e.g., the outgassing rocket type effect of the nucleus. In those cases where Halley observations are not sufficient, the average value derived from a larger set of other comets is used, or data from comet Bennett, Halley's best analog, are taken. A flow diagram shows how the parameter values are derived and to what extent these derived values are interdependent.

Newburn, R. L.↗

The derivation of Halley parameters from observations

Nominal value model parameters for the nucleus (size, mass, rotation, albedo, hydrogen production) the dust and gas for P/Halley at 0.9 AU postperihelion are derived from the light curve and spectra of Halley and by modeling the effect of the nongravitational forces, e.g., the outgassing rocket type effect of the nucleus. In those cases where Halley observations are not sufficient, the average value derived from a larger set of other comets is used, or data from comet Bennett, Halley's best analog, are taken. A flow diagram shows how the parameter values are derived and to what extent these derived values are interdependent. Previously announced in STAR as N82-23097

Newburn, R. L.↗

Development of a flow feedback pulse duplicator system with rhesus monkey arterial input impedance characteristics

An in vitro pulsatile pump flow system that is capable of producing physiologic pressures and flows in a mock circulatory system tuned to reproduce the first nine harmonics of the input impedance of a rhesus monkey was developed and tested. The system was created as a research tool for evaluating cardiovascular function and for the design, testing, and evaluation of electrical-mechanical cardiovascular models and chronically implanted sensors. The system possesses a computerized user interface for controlling a linear displacement pulsatile pump in a controlled flow loop format to emulate in vivo cardiovascular characteristics. Evaluation of the pump system consisted of comparing its aortic pressure and flow profiles with in vivo rhesus hemodynamic waveforms in the time and frequency domains. Comparison of aortic pressure and flow data between the pump system and in vivo data showed good agreement in the time and frequency domains, however, the pump system produced a larger pulse pressure. The pump system can be used for comparing cardiovascular parameters with predicted cardiovascular model values and for evaluating such items as vascular grafts, heart valves, biomaterials, and sensors. This article describes the development and evaluation of this feedback controlled cardiovascular dynamics simulation modeling system.

Non-NASA Center↗

GCR Transport in the Brain: Assessment of Self-Shielding, Columnar Damage, and Nuclear Reactions on Cell Inactivation Rates

Radiation shield design is driven by the need to limit radiation risks while optimizing risk reduction with launch mass/expense penalties. Both limitation and optimization objectives require the development of accurate and complete means for evaluating the effectiveness of various shield materials and body-self shielding. For galactic cosmic rays (GCR), biophysical response models indicate that track structure effects lead to substantially different assessments of shielding effectiveness relative to assessments based on LET-dependent quality factors. Methods for assessing risk to the central nervous system (CNS) from heavy ions are poorly understood at this time. High-energy and charge (HZE) ion can produce tissue events resulting in damage to clusters of cells in a columnar fashion, especially for stopping heavy ions. Grahn (1973) and Todd (1986) have discussed a microlesion concept or model of stochastic tissue events in analyzing damage from HZE's. Some tissues, including the CNS, maybe sensitive to microlesion's or stochastic tissue events in a manner not illuminated by either conventional dosimetry or fluence-based risk factors. HZE ions may also produce important lateral damage to adjacent cells. Fluences of high-energy proton and alpha particles in the GCR are many times higher than HZE ions. Behind spacecraft and body self-shielding the ratio of protons, alpha particles, and neutrons to HZE ions increases several-fold from free-space values. Models of GCR damage behind shielding have placed large concern on the role of target fragments produced from tissue atoms. The self-shielding of the brain reduces the number of heavy ions reaching the interior regions by a large amount and the remaining light particle environment (protons, neutrons, deuterons. and alpha particles) may be the greatest concern. Tracks of high-energy proton produce nuclear reactions in tissue, which can deposit doses of more than 1 Gv within 5 - 10 cell layers. Information on rates of cell killing from GCR, including patterns of cell killing from single particle tracks. can provide useful information on expected differences between proton and HZE tracks and clinical experiences with photon irradiation. To model effects on cells in the brain, it is important that transport models accurately describe changes in the GCR due to interactions in the cranium and proximate tissues. We describe calculations of the attenuated GCR particle fluxes at three dose-points in the brain and associated patterns of cell killing using biophysical models. The effects of the brain self-shielding and bone-tissue interface of the skull in modulating the GCR environment are considered. For each brain dose-point, the mass distribution in the surrounding 4(pi) solid angle is characterized using the CAM model to trace 512 rays. The CAM model describes the self-shielding by converting the tissue distribution to mass-equivalent aluminum, and nominal values of spacecraft shielding is considered. Particle transport is performed with the proton, neutron, and heavy-ion transport code HZETRN with the nuclear fragmentation model QMSFRG. The distribution of cells killed along the path of individual GCR ions is modeled using in vitro cell inactivation data for cells with varying sensitivity. Monte Carlo simulations of arrays of inactivated cells are considered for protons and heavy ions and used to describe the absolute number of cell killing events of various magnitude in the brain from the GCR. Included are simulations of positions of inactivated cells from stopping heavy ions and nuclear stars produced by high-energy ions most importantly, protons and neutrons.

Shavers, M. R.↗

Studies of Localization Effects on Transverse Kinematic Imbalance in the GENIE Generator

The forthcoming Deep Underground Neutrino Experiment (DUNE) requires precise modeling of neutrino--nucleus interactions to achieve its neutrino-oscillation measurement goals. GENIE, the Monte Carlo event generator used by DUNE and other Fermilab-based experiments as a central value model for neutrino-nucleus cross sections, exhibits known discrepancies in comparison to MicroBooNE cross section data, especially when considering neutrino scattering events' transverse kinematic imbalance (TKI). For quasielastic-like measurements, the data show a larger transverse missing momentum tail while maintaining a peak similar to that predicted by the baseline GENIE model. Previous attempts at a solution include variations of final-state interaction (FSI) strengths, incorrectly decreasing both the peak and tail, thus leaving the discrepancy unresolved. This work investigates whether inconsistencies between local and global treatments of intranuclear physics contribute to the observed mismodeling. In this work, GENIE FSI routines have been modified to directly utilize intranuclear particle positions, thereby introducing a newly localized momentum treatment in correlation with the nominal density in both the hA and hN intranuclear cascade models for their 2018 and 2025 variants. Meson-exchange-current (MEC) localization was also tested for the hN 2018 model. Comparisons of the intranuclear nucleons' ("scattering center") momentum and its radial dependence validate the localization implementation. However, while such consistent localization produces modest changes in the proton momentum spectrum at low-to-medium momenta, only small changes are observed in the TKI distributions. These changes are insufficient to account for the discrepancy with MicroBooNE data. Although a localized treatment improves the internal consistency of the GENIE model, the origin of the TKI discrepancy remains unresolved by such a solution.

Bulla, Braden [Ctr. Coll., Danville; Fermilab]↗

Inferring Absorbing Organic Carbon Content from AERONET Data

Black carbon, light-absorbing organic carbon (often called brown carbon) and mineral dust are the major light-absorbing aerosols. Currently the sources and formation of brown carbon aerosol in particular are not well understood. In this study we estimated globally the amount of light absorbing organic carbon and black carbon from AERONET measurements. We find that the columnar absorbing organic carbon (brown carbon) levels in biomass burning regions of South-America and Africa are relatively high (about 15-20 magnesium per square meters during biomass burning season), while the concentrations are significantly lower in urban areas in US and Europe. However, we estimated significant absorbing organic carbon amounts from the data of megacities of newly industrialized countries, particularly in India and China, showing also clear seasonality with peak values up to 30-35 magnesium per square meters during the coldest season, likely caused by the coal and biofuel burning used for heating. We also compared our retrievals with the modeled organic carbon by global Oslo CTM for several sites. Model values are higher in biomass burning regions than AERONET-based retrievals, while opposite is true in urban areas in India and China.

Arola, A.↗

Design and Performance of the Sorbent-Based Atmosphere Revitalization System for Orion

Validation and simulations of a real-time dynamic cabin model were conducted on the sorbent-based atmosphere revitalization system for Orion. The dynamic cabin model, which updates the concentration of H2O and CO2 every second during the simulation, was able to predict the steady state model values for H2O and CO2 for long periods of steady metabolic production for a 4-person crew. It also showed similar trends for the exercise periods, where there were quick changes in production rates. Once validated, the cabin model was used to determine the effects of feed flow rate, cabin volume and column volume. A higher feed flow rate reduced the cabin concentrations only slightly over the base case, a larger cabin volume was able to reduce the cabin concentrations even further, and the lower column volume led to much higher cabin concentrations. Finally, the cabin model was used to determine the effect of the amount of silica gel in the column. As the amount increased, the cabin concentration of H2O decreased, but the cabin concentration of CO2 increased.

Ritter, James A.↗

An Image-Plane Approach to Gravitational Lens Modeling of Interferometric Data

Strong gravitational lensing acts as a cosmic telescope, enabling the study of the high-redshift universe. Astronomical interferometers, such as the Atacama Large Millimeter/submillimeter Array (ALMA), have provided high-resolution images of strongly lensed sources at millimeter and submillimeter wavelengths. To model the mass and light distributions of lensing and source galaxies from strongly lensed images, strong lens modeling for interferometric observations is conventionally performed in the visibility space, which is computationally expensive. In this paper, we implement an image-plane lens modeling methodology for interferometric dirty images by accounting for noise correlations. We show that the image-plane likelihood function produces accurate model values when tested on simulated ALMA observations with an ensemble of noise realizations. We also apply our technique to ALMA observations of two sources selected from the South Pole Telescope survey, comparing our results with previous visibility-based models. Our model results are consistent with previous models for both parametric and pixelated source-plane reconstructions. We implement this methodology for interferometric lens modeling in the open-source software package lenstronomy.

Zhang, Nan [Illinois U., Urbana (main)] (ORCID:000↗

Neutron Yield of Thermo Scientific P385 D-T Neutron Generator vs . Current and Voltage

The Thermo Scientific P385 Neutron Generator is a compact neutron source, producing 14 MeV neutrons through the deuterium-tritium (DT) fusion reaction. It is important to measure and understand the dependence of the neutron production rate on the accelerator current and voltage. In this study we evaluated neutron production with an absolutely calibrated liquid scintillator neutron spectrometer (BTI N-Probe), an absolutely calibrated He-3 detector surrounded by HDPE shells (Detec Nested Neutron Spectrometer, NNS), and two uncalibrated ZnS fast neutron scintillators (EJ-410), for both A3082 and A3083 sealed tubes. Here we also modeled the neutron yield using the TRIM code, which calculates the trajectory and the energy loss of deuterons and tritons within the target. Experimental results showed an essentially linear dependence on beam current, as expected. A 3.59 ±0.08 power law dependence on the operating voltage was measured, in effective agreement with the modeled value of 3.5. A series of absolute NNS and N-Probe measurements, matched against MCNP calculations, showed that the A3083 and A3082 tubes provide a maximum neutron yield of 8.2 × 10 8 n/s and 4.7 × 10 8 n/s respectively, with estimated uncertainty of ±10%.We showed, through modeling, that tritium decay is not a significant consideration for tubes, such as these, with lifetimes of less than 10 years.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Redox poise in R. rubrum phototrophic growth drives large-scale changes in macromolecular pathways

During photoheterotrophic growth on organic substrates, purple nonsulfur photosynthetic bacteria like Rhodospirillum rubrum can acquire electrons by multiple means, including oxidation of organic substrates, oxidation of inorganic electron donors (e.g., H 2 ), and by reverse electron flow from the photosynthetic electron transport chain. These electrons are stored as reduced electron-carrying cofactors (e.g., NAD(P)H and ferredoxin). The overall ratio of oxidized to reduced cofactors (e.g., NAD(P)+:NAD(P)H), or ’redox poise’, is difficult to understand or predict, as are the cellular processes for dissipating these reducing equivalents. Using physics-based models that capture mass action kinetics consistent with the thermodynamics of reactions and pathways, a range of redox conditions for heterophototrophic growth are evaluated, from conditions in which the NADP+/NADPH levels approach thermodynamic equilibrium to conditions in which the NADP+/NADPH ratio is far above the typical physiological values. Modeling predictions together with experimental measurements indicate that the redox poise of the cell results in large-scale changes in the activity of biosynthetic pathways and, thus, changes in cell macromolecule levels (DNA, RNA, proteins, and fatty acids). Furthermore, modeling predictions indicate that during phototrophic growth, reverse electron flow from the quinone pool is a minor contributor to the production of reduced cofactors (e.g., NAD(P)H) compared to other oxidative processes (H 2 and carbon substrate oxidation). Instead, the quinone pool primarily operates to aid ATP production. The high level of ATP, in turn, drives reduction processes even when NADPH levels are relatively low compared to NADP+ by coupling ATP hydrolysis to the reductive processes. The model, in agreement with experimental measurements of macromolecule ratios of cells growing on different carbon substrates, indicates that the dynamics of nucleotide versus lipid and protein production is likely a significant mechanism of balancing oxidation and reduction in the cell.

59 BASIC BIOLOGICAL SCIENCES↗

Redox Poise during Rhodospirillum rubrum Phototrophic Growth Drives Large-scale Changes in Macromolecular Synthesis Pathways

During photoheterotrophic growth on organic substrates, purple nonsulfur photosynthetic bacteria like Rhodospirillum rubrum can acquire electrons by multiple means, including oxidation of organic substrates, oxidation of inorganic electron donors (e.g., H2), and by reverse electron flow from the photosynthetic electron transport chain. These electrons are stored as reduced electron-carrying cofactors (e.g., NAD(P)H and ferredoxin). The overall ratio of oxidized to reduced cofactors (e.g., NAD(P)+:NAD(P)H), or ’redox poise’, is difficult to understand or predict, as are the cellular processes for dissipating these reducing equivalents. Using physics-based models that capture mass action kinetics consistent with the thermodynamics of reactions and pathways, a range of redox conditions for heterophototrophic growth are evaluated, from conditions in which the NADP+/NADPH levels approach thermodynamic equilibrium to conditions in which the NADP+/NADPH ratio is far above the typical physiological values. Modeling predictions together with experimental measurements indicate that the redox poise of the cell results in large-scale changes in the activity of biosynthetic pathways and, thus, changes in cell macromolecule levels (DNA, RNA, proteins, and fatty acids). Furthermore, modeling predictions indicate that during phototrophic growth, reverse electron flow from the quinone pool is a minor contributor to the production of reduced cofactors (e.g., NAD(P)H) compared to other oxidative processes (H2 and carbon substrate oxidation). Instead, the quinone pool primarily operates to aid ATP production. The high level of ATP, in turn, drives reduction processes even when NADPH levels are relatively low compared to NADP+ by coupling ATP hydrolysis to the reductive processes. The model, in agreement with experimental measurements of macromolecule ratios of cells growing on different carbon substrates, indicates that the dynamics of nucleotide versus lipid and protein production is likely a significant mechanism of balancing oxidation and reduction in the cell.

59 BASIC BIOLOGICAL SCIENCES↗

A system debugging model.

Consideration of the nature of the 'debugging' process applied to a new complex system during the initial period of its life. During this period failures and errors are corrected as they occur, with resulting improvement in the subsequent performance of the system. One mathematical idealization of this process leads to the assumption that system failure rate is decreasing with time. In practice, the debugging phase is considered completed when the failure rate reaches an equilibrium or constant value. Models are formulated for this phenomenon. Maximum likelihood estimates are obtained for relevant failure rate functions and for the end of the debugging period. A conservative upper confidence bound on the stable failure rate is obtained.

Barlow, R. E.↗