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Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

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At least 55 records · Page 3

A Metal-on-Metal Growth Approach to Metal–Metal Oxide Core–Shell Nanostructures with Plasmonic Properties

Hybrid core–shell nanoparticles integrate the material properties from individual components; however, the synthesis of core–shell nanoparticles with dissimilar materials remains challenging. Herein, we applied a metal-on-metal thin film growth approach to control the conformal deposition of non-precious metal shells on the Cu-based metal cores to form core–shell structures of metal–metal oxide hybrids (M–M'O x , where M = AuCu 3 or Cu, M' = Fe, Mn, and Ni). The deposition kinetics were controlled by a temperature-regulated thermal decomposition of zerovalent transition metal complexes. It is predicted that the conformal deposition can be promoted by keeping the initial deposition temperature close to the thermal decomposition temperature of the zerovalent precursors. The mechanisms of strain reduction and interdiffusion facilitate conformal deposition over island growth in the synthesis with slow reaction kinetics. This study provides insightful guidance to metal-on-metal growth in solution at the nanoscale and thus the seed-mediated approach to hybrid core–shell structures. The optical properties of these metal–metal oxide hybrids were investigated experimentally and interpreted by theoretical simulations. Despite damping effects, the plasmonic properties of these Cu-based core-metal oxide shell structures may have the potential to enable plasmon-enhanced applications.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Extending the predictive power of perturbative QCD using the principle of maximum conformality and the Bayesian analysis

In addition to the evaluation of high-order loop contributions, the precision and predictive power of perturbative QCD (pQCD) predictions depends on two important issues: (1) how to achieve a reliable, convergent fixed-order series, and (2) how to reliably estimate the contributions of unknown higher-order terms. The recursive use of renormalization group equation, together with the Principle of Maximum Conformality (PMC), eliminates the renormalization scheme-and-scale ambiguities of the conventional pQCD series. The result is a conformal, scale-invariant series of finite order which also satisfies all of the principles of the renormalization group. In this paper we propose a novel Bayesian-based approach to estimate the size of the unknown higher order contributions based on an optimized analysis of probability distributions. We show that by using the PMC conformal series, in combination with the Bayesian analysis, one can consistently achieve high degree of reliability estimates for the unknown high order terms. Thus the predictive power of pQCD can be greatly improved. We illustrate this procedure for two pQCD observables: R e+e– and R τ , which are each known up to four loops in pQCD. Numerical analyses confirm that by using the scale-independent and more convergent PMC conformal series, one can achieve reliable Bayesian probability estimates for the unknown higher-order contributions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Unnuclear physics: Conformal symmetry in nuclear reactions

Significance Symmetry plays a key role in modern physics as a guiding principle for fundamental theories of nature. We use the nonrelativistic conformal symmetry to predict universal energy spectra of final states in reactions of quantum particles at vastly different length scales. Our work extends Georgi’s “unparticle” proposal to nonrelativistic spin-1/2 fermions in the unitary regime of strong interactions. These systems form so-called unparticles, which behave characteristically different from normal particles. They can be engineered with ultracold atoms and occur naturally in nuclear reactions with multiple neutrons—a situation we dub “unnuclear physics.” We present the general scenario of unnuclear physics, apply it to identify unnuclei in nuclear reactions, and highlight the opportunity to measure unnuclei at radioactive beam facilities.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Broken conformal window

We show that near the edges of the conformal window of supersymmetric SU(Nc) QCD, perturbed by Anomaly Mediated Supersymmetry Breaking (AMSB), chiral symmetry can be broken depending on the initial conditions of the RG flow. We do so by perturbatively expanding around Banks-Zaks fixed points and taking advantage of Seiberg duality. Interpolating between the edges of the conformal window, we predict that non-supersymmetric QCD breaks chiral symmetry up to N f ≤ 3N c − 1, while we cannot say anything definitive for N f ≥ 3N c at this moment.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

tinyIFD: A High-Throughput Binding Pose Refinement Workflow Through Induced-Fit Ligand Docking

A critical step in structure-based drug discovery is predicting whether and how a candidate molecule binds to a model of a therapeutic target. However, substantial protein side chain movements prevent current screening methods, such as docking, from accurately predicting the ligand conformations and require expensive refinements to produce viable candidates. Here, we present the development of a high-throughput and flexible ligand pose refinement workflow, called “tinyIFD”. The main features of the workflow include the use of specialized high-throughput, small-system MD simulation code mdgx.cuda and an actively learning model zoo approach. We show the application of this workflow on a large test set of diverse protein targets, achieving 66% and 76% success rates for finding a crystal-like pose within the top-2 and top-5 poses, respectively. We also applied this workflow to the SARS-CoV-2 main protease (M pro ) inhibitors, where we demonstrate the benefit of the active learning aspect in this workflow.

37 INORGANIC, ORGANIC, PHYSICAL, AND ANALYTICAL CH↗

Universal signatures of Dirac fermions in entanglement and charge fluctuations

We study the entanglement entropy (EE) and charge fluctuations in models where the low-energy physics is governed by massless Dirac fermions. We focus on the response to flux insertion which, for the EE, is widely assumed to be universal, i.e., independent of the microscopic details. We provide an analytical derivation of the EE and charge fluctuations for the seminal example of graphene, using the dimensional reduction of its tight-binding model to the one-dimensional Su-Schrieffer-Heeger model. Our asymptotic expression for the EE matches the conformal field theory prediction. We show that the charge variance has the same asymptotic behavior, up to a constant prefactor. To check the validity of universality arguments, we numerically consider several models, with different geometries and numbers of Dirac cones, and either for strictly two-dimensional models or for a gapless surface mode of three-dimensional topological insulators. We also show that the flux response does not depend on the entangling surface geometry as long as it encloses the flux. Finally we consider the universal corner contributions to the EE. We show that in the presence of corners, the Kitaev-Preskill subtraction scheme provides nonuniversal, geometry-dependent results.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

A kinematical/numerical analysis of rotor-stator interaction noise

In this study, the unsteady, thin-layer Navier-Stokes equations are solved using a system of patched grids for a rotor-stator configuration of an axial turbine. The study examines the plurality of spinning modes that are present in such an interaction. The propagation of these modes is analyzed and appropriate grid spacing chosen in the far upstream and downstream regions to attenuate reflections from the computational boundaries. In addition, radiating boundary conditions are implemented based on the farfield acoustical behavior of the flow field. Results in the form of pressure amplitudes and the spectra of turbine tones are presented. Numerical results and experimental data are compared wherever possible. The numerical results are also shown to conform with the predictions of a kinematical analysis of the flowfield.

Rangwalla, Akil A.↗

Measurements of total reactive nitrogen during the Airborne Arctic Stratospheric Expedition

Composite distributions of measured total reactive nitrogen NO(y), from the NASA ER-2 during the Airborne Arctic Stratospheric Expedition are presented. The observed features of these distributions are discussed in terms of the controlling dynamical, chemical and microphysical processes. In the latitudinal profile from 58 deg N to within about 4 deg poleward of the polar vortex boundary, NO(y) conforms closely to predictions of NO(y) based on N2O measurements. Poleward of 5 deg of latitude within the boundary, the average NO(y) decreases sharply and is significantly lower than that predicted from N2O. This feature is consistent with loss of NO(y) through sedimentation of particles containing NO(y) in polar stratospheric clouds.

Kawa, S. R.↗

Use of photostress and strain gages to analyze behavior of weldments

Tensile and pure bending tests were conducted on specimens having welded joints made from 2219-T87 aluminum alloy and 2319 filler. Data were collected using photoelastic coatings and strain gages. Stress-strain relationships and contraction ratios were determined at several points in a grid covering the weld material and heat affected zone. Material behavior was nonlinear and nonuniform at all points in the grid and contraction ratios did not conform to those predicted by Chakrabarty's plasticity theory. Yielding in joints made using four new welding procedures was examined. None of the new procedures produced more uniform yielding in the joint.

Gambrell, S. C., Jr.↗

A numerical analysis of tonal acoustics in rotor-stator interactions

In this study, the unsteady, thin-layer, Navier-Stokes equations are solved using a system of patched grids for a rotor-stator configuration of an axial turbine. The study focuses on the plurality of spinning modes that are present in such an interaction. The propagation of these modes in the upstream and downstream regions is analyzed and compared with numerical results. It was found that the numerically calculated tonal acoustics could be affected by the type of numerical boundary conditions employed at the inlet and exit of the computational boundaries and the grid spacing in the upstream and downstream regions. Results in the form of surface pressure amplitudes and the spectra of turbine tones and their far field behavior are presented. Numerical results and experimental data are compared wherever possible. The 'mode-content' for different harmonics of blade-passage frequency is shown to conform with that predicted by a kinematical analysis.

Rangwalla, A. A.↗

Crustal Structure of the Iceland Region from Spectrally Correlated Free-air and Terrain Gravity Data

Seismic refraction studies have provided critical, but spatially restricted constraints on the structure of the Icelandic crust. To obtain a more comprehensive regional view of this tectonically complicated area, we spectrally correlated free-air gravity anomalies against computed gravity effects of the terrain for a crustal thickness model that also conforms to regional seismic and thermal constraints. Our regional crustal thickness estimates suggest thickened crust extends up to 500 km on either side of the Greenland-Scotland Ridge with the Iceland-Faeroe Ridge crust being less extended and on average 3-5 km thinner than the crust of the Greenland-Iceland Ridge. Crustal thickness estimates for Iceland range from 25-35 km in conformity with seismic predictions of a cooler, thicker crust. However, the deepening of our gravity-inferred Moho relative to seismic estimates at the thermal plume and rift zones of Iceland suggests partial melting. The amount of partial melting may range from about 8% beneath the rift zones to perhaps 20% above the plume core where mantle temperatures may be 200-400 C above normal. Beneath Iceland, areally limited regions of partial melting may also be compositionally and mechanically layered

Leftwich, T. E.↗

Crustal Structure of the Iceland Region from Spectrally Correlated Free-air and Terrain Gravity Data

Seismic refraction studies have provided critical, but spatially restricted constraints on the structure of the Icelandic crust. To obtain a more comprehensive regional view of this tectonically complicated area, we spectrally correlated free-air gravity anomalies against computed gravity effects of the terrain for a crustal thickness model that also conforms to regional seismic and thermal constraints. Our regional crustal thickness estimates suggest thickened crust extends up to 500 km on either side of the Greenland-Scotland Ridge with the Iceland-Faeroe Ridge crust being less extended and on average 3-5 km thinner than the crust of the Greenland-Iceland Ridge. Crustal thickness estimates for Iceland range from 25-35 km in conformity with seismic predictions of a cooler, thicker crust. However, the deepening of our gravity-inferred Moho relative to seismic estimates at the thermal plume and rift zones of Iceland suggests partial melting. The amount of partial melting may range from about 8% beneath the rift zones to perhaps 20% above the plume core where mantle temperatures may be 200-400 C above normal. Beneath Iceland, areally limited regions of partial melting may also be compositionally and mechanically layered and intruded. The mantle plume appears to be centered at (64.6 deg N, 17.4 deg W) near the Vatnajokull Glacier and the central Icelandic neovolcanic zones.

Leftwich, T. E.↗

A curated benchmark for cofolding models on kinase conformational states

Abstract Protein kinases are critical drug targets, requiring therapeutics that can modulate their active and inactive conformational states. While cofolding models can generate global folds directly from kinase sequences and ligand SMILES strings, these models have not yet been tested on their ability to recover ligand-induced-fit conformational states of the kinase proteins. Here, we introduce KinConfBench, a curated benchmark of 2225 high-quality human kinase chains to evaluate the ability of four state-of-the-art cofolding models—Boltz-2, Chai-1, Protenix, and RoseTTAFold-All-Atom—to recover both canonical and rare conformational states. We show that geometric success metrics of a ligand pose in the active site do not correlate strongly with the correct kinase conformational state, motivating a new set of dynamical benchmarks for assessing cofolding models. While all four cofolding models achieve ~60–80% prediction accuracy for kinase conformational classification, they exhibit severe mode collapse when performing multiple inferences, show negligible structural diversity in sampling induced-fit motions, and display a prevalent “apo-drift” in which most cofolding models predominantly predict the kinase to be in its ligand-free state. Our results highlight that capturing ligand-induced protein conformational diversity, not just geometric fit, is critical for next-generation structure-based drug discovery.

Sun, Kunyang↗

Molecular Structure and Conformational Design of Donor‐Acceptor Conjugated Polymers to Enable Predictable Optoelectronic Property

Abstract Tuning the optoelectronic properties of donor‐acceptor conjugated polymers (D‐A CPs) is of great importance in designing various organic optoelectronic devices. However, there remains a critical challenge in precise control of bandgap through synthetic approach, since the chain conformation also affects molecular orbital energy levels. Here, D‐A CPs with different acceptor units are explored that show an opposite trend in energy band gaps with the increasing length of oligothiophene donor units. By investigating their chain conformation and molecular orbital energy, it is found that the molecular orbital energy alignment between donor and acceptor units plays a crucial role in dictating the final optical bandgap of D‐A CPs. For polymers with staggered orbital energy alignment, the higher HOMO with increasing oligothiophene length leads to a narrowing of the optical bandgap despite decreased chain rigidity. On the other hand, for polymers with sandwiched orbital energy alignment, the increased band gap with increasing oligothiophene length originates from the reduction of bandwidth due to more localized charge density distribution. Thus, this work provides a molecular understanding of the role of backbone building blocks on the chain conformation and bandgaps of D‐A CPs for organic optoelectronic devices through the conformation design and segment orbital energy alignment.

Cao, Zhiqiang↗

Large-scale application of free energy perturbation calculations for antibody design

Abstract Alchemical free energy perturbation (FEP) is a rigorous and powerful technique to calculate the free energy difference between distinct chemical systems. Here we report our implementation of automated large-scale FEP calculations, using the Amber software package, to facilitate antibody design and evaluation. In combination with Hamiltonian replica exchange, our FEP simulations aim to predict the effect of mutations on both the binding affinity and the structural stability. Importantly, we incorporate multiple strategies to faithfully estimate the statistical uncertainties in the FEP results. As a case study, we apply our protocols to systematically evaluate variants of the m396 antibody for their conformational stability and their binding affinity to the spike proteins of SARS-CoV-1 and SARS-CoV-2. By properly adjusting relevant parameters, the particle collapse problems in the FEP simulations are avoided. Furthermore, large statistical errors in a small fraction of the FEP calculations are effectively reduced by extending the sampling, such that acceptable statistical uncertainties are achieved for the vast majority of the cases with a modest total computational cost. Finally, our predicted conformational stability for the m396 variants is qualitatively consistent with the experimentally measured melting temperatures. Our work thus demonstrates the applicability of FEP in computational antibody design.

59 BASIC BIOLOGICAL SCIENCES↗

Deep learning-based spatio-temporal estimate of greenhouse gas emissions using satellite data

Accurate estimation of greenhouse gases (GHGs) emissions is very important for developing mitigation strategies to climate change by controlling and reducing GHG emissions. This project aims to develop multiple deep learning approaches to estimate anthropogenic greenhouse gas emissions using multiple types of satellite data. NO2 concentration is chosen as an example of GHGs to evaluate the proposed approach. Two sentinel satellites (sentinel-2 and sentinel-5P) provide multiscale observations of GHGs from 10-60m resolution (sentinel-2) to ~kilometer scale resolution (sentinel-5P). Among multiple deep learning (DL) architectures evaluated, two best DL models demonstrate that key features of spatio-temporal satellite data and additional information (e.g., observation times and/or coordinates of ground stations) can be extracted using convolutional neural networks and feed forward neural networks, respectively. In particular, irregular time series data from different NO 2 observation stations limit the flexibility of long short-term memory architecture, requiring zero-padding to fill in missing data. However, deep neural operator (DNO) architecture can stack time-series data as input, providing the flexibility of input structure without zero-padding. As a result, the DNO outperformed other deep learning architectures to account for time-varying features. Overall, temporal patterns with smooth seasonal variations were predicted very well, while frequent fluctuation patterns were not predicted well. In addition, uncertainty quantification using conformal inference method is performed to account for prediction ranges. Overall, this research will lead to a new groundwork for estimating greenhouse gas concentrations using multiple satellite data to enhance our capability of tracking the cause of climate change and developing mitigation strategies.

54 ENVIRONMENTAL SCIENCES↗

Optical, thermal, and electrical performance of low-CR solar arrays

This paper describes the analysis and testing of a photovoltaic low-CR concentrator shaped like a truncated pyramid with an aperture of 0.5 m on a side and a geometric concentration ratio of six. The truncated base plane is covered by either silicon (Si) or gallium arsenide (GaAs) solar cells. Ray-trace analysis of the concentrator predicts a peak optical efficiency of 0.77, which falls off only gradually with pointing error. A coupled thermal-electrical analysis of the system shows that the moderately nonuniform illumination produced by the concentrator does not result in significant mismatch losses, provided the solar cells are connected in parallel groups. The results of ground tests involving a full-scale prototype concentrator conform well with theoretical predictions.

French, E. P.↗

Topological symplectic Kondo effect

Multiple conduction channels interacting with a quantum impurity—a spin in the conventional “multichannel Kondo effect” or a topological mesoscopic device (“topological Kondo effect”)—has been proposed as a platform to realize anyonic quasiparticles. However, the above implementations require either perfect channel symmetry or the use of Majorana fermions. Here, in this work, we propose a Majorana-free mesoscopic setup which implements the Kondo effect of the symplectic Lie group and can harbor emergent anyons (including Majorana fermions, Fibonacci anyons, and parafermions) even in the absence of perfect channel symmetry. In addition to the detailed prescription of the implementation, we present the strong coupling solution by mapping the model to the multichannel Kondo effect associated to an internal symmetry and exploit conformal field theory to predict the nontrivial scaling of a variety of observables, including conductance, as a function of temperature. This work does not only open the door for robust Kondo-based anyon platforms, but also sheds light on the physics of strongly correlated materials with competing order parameters.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗