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At least 55 records · Page 3

VHH antibody loop guides design of a synthetic macrocyclic peptide that potently blocks influenza virus membrane fusion

Abstract Miniaturizing biologically complex structural motifs to produce synthetic functional mimetics holds significant promise for development of new therapeutic modalities. Here, we demonstrate a unique approach using the key binding loop of the single variable domain of a heavy chain (V H H) llama antibody as a starting point for peptide design. V H H antibodies of camelids and sharks generally have longer, but more ligand-efficient complementarity determining region 3 (CDR3) loops and are relatively stable structures. We harnessed these attributes as templates for design of a series of synthetic macrocyclic peptides. The designed peptides exhibit nanomolar binding to influenza hemagglutinin (HA) and heterosubtypic in vitro neutralization breadth against influenza A viruses by inhibiting the low pH mediated HA conformational changes that lead to membrane fusion. X-ray structures of peptide-HA complexes reveal high structural mimicry with the parent V H H antibody. One such macrocycle peptide candidate is promising for further development of broad protection against influenza A group 1 viruses.

Kadam, Rameshwar U.↗

Insights into Prismatic Loop Formation in Irradiated Fe–Cr Alloys from Hypothesis-Driven Active Learning and Causal Analysis

Neutron and electron irradiation experimental studies conducted on body-centered cubic Fe and Fe–Cr alloys have established two prismatic dislocation loop populations, which have Burgers vectors of either a/2$\langle$111$\rangle$ or a$\langle$100$\rangle$. Here, the loop formation depends on factors such as dose (D), dose rate (D rt ), temperature (T), chromium content (Cr%), and other alloying elements. Hence, it is important to understand how irradiation-induced dislocation loops evolve conditional upon the loop characteristics, such as loop density (DD), average loop size d̅, and irradiation parameters (D, D rt , T, and irradiation type), which is still an active area of research. To understand these complex structure–property relationships, machine learning (ML) is employed in a three-step approach. This includes imputing missing data with a k-nearest neighbor, generating functionalized features, and assessing feature importance with random forest classification and regression. Physics-based features are incorporated in a hypothesis-driven active learning scheme to overcome data unavailability challenges. Insights obtained from ML models (i) to categorize dislocation loop types, show the highest correlation with d̅; (ii) Log(DD), obtained through mathematical formulations involving D, Cr%, d̅, and T (e.g., Log(DD) ~ D + exp(-Cr%) + 1/d̅ and log(DD) ~ D + exp(-Cr%) + 1/T). Hypothesis-driven active learning is able to predict Log(DD) in which the experimental date is not known. Causal models verify cause–effect relationships for dislocation loop classification and irradiation factors in FeCr alloys.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Asymmetric recognition of HIV-1 Envelope trimer by V1V2 loop-targeting antibodies

The HIV-1 envelope (Env) glycoprotein binds to host cell receptors to mediate membrane fusion. The prefusion Env trimer is stabilized by V1V2 loops that interact at the trimer apex. Broadly neutralizing antibodies (bNAbs) against V1V2 loops, exemplified by PG9, bind asymmetrically as a single Fab to the apex of the symmetric Env trimer using a protruding CDRH3 to penetrate the Env glycan shield. Here we characterized a distinct mode of V1V2 epitope recognition by the new bNAb BG1 in which two Fabs bind asymmetrically per Env trimer using a compact CDRH3. Comparisons between cryo-EM structures of Env trimer complexed with BG1 (6.2 Å resolution) and PG9 (11.5 Å resolution) revealed a new V1V2-targeting strategy by BG1. Analyses of the EM structures provided information relevant to vaccine design including molecular details for different modes of asymmetric recognition of Env trimer and a binding model for BG1 recognition of V1V2 involving glycan flexibility.

60 APPLIED LIFE SCIENCES↗

An analytic result for the 0 → ggHHH amplitude

We present a fully analytic calculation of the leading-order one-loop amplitude for triple Higgs production via gluon fusion, gg → HHH, retaining full dependence on the mass of the heavy quark circulating in the loop. This amplitude provides a direct probe of the triple and quartic Higgs self-couplings, the measurement of which is a central goal of current and future colliders. The amplitude can be presented in compact form thanks to the use of analytic reconstruction techniques, based on finite-field and p-adic evaluations, multivariate partial fraction decompositions, and primary decompositions to identify common numerator factors. Although full analytic results are given in the text and in the supplementary material, the main thrust of this paper is to further test and illustrate these analytic reconstruction techniques in a concrete physical example. Our results provide a compact and efficient representation of the matrix element for this process, enabling evaluations that are more than an order of magnitude faster than existing numerical alternatives. Full analytic control of the leading-order, loop-induced amplitude is an important step towards handling more complex 2-loop or real-radiation corrections to this and related processes.

Campbell, John M. [Fermilab] (ORCID:00000002136193↗

An Experimental Reversed Heat Flux Investigation of the Helium-Cooled Modular Divertor with Multiple Jets

The Georgia Institute of Technology group has performed studies to characterize the thermal hydraulics of a single “finger” module of the helium-cooled modular divertor with multiple jets (HEMJ) proposed for long-pulse magnetic fusion reactors in a helium (He) loop designed with maximum mass flow rate of 10 g/s. However, testing divertor modules at prototypical heat fluxes and temperatures remains an engineering challenge. A new larger helium loop with a maximum mass flow rate of 100 g/s, suitable for evaluating helium-cooled divertors with larger surface areas such as a nine-finger HEMJ module, is currently being constructed. This work presents an experimental validation of a numerical model exploring the applicability of the “reversed heat flux approach,” which cools (versus heats) the plasma-facing surface of the divertor module to evaluate the helium-side heat transfer coefficient (HTC). The approach is to be used for performance evaluation of single and multiple modules of HEMJ in existing and future large helium loops. A cooling facility for producing a jet of water with a maximum mass flow rate of 1.4 kg/s at a maximum pressure of 0.4 MPa and temperature of 295 K (Re = 2.2 × 10 5 ) is described. Numerical and experimental results are presented for the heat flux and average helium impingement surface temperature over a range of water flow rates (0.5 to 1.4 kg/s) for heat fluxes as high as 5 MW/m 2 . The numerical model suggests that the HTC of the water impingement surface is comparable to or greater than that of the helium impingement surface. For given helium and water temperatures, the heat flux values are generally limited by conduction across the outer shell. These initial studies provide guidance on extending this approach to estimating the thermal-hydraulic performance of larger divertor module designs while reducing the challenges associated with studying such designs in the normal heating configuration at their extremely high prototypical temperatures and incident heat fluxes.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Revealing the synergistic effects of sequential and simultaneous dual beam irradiations in tungsten via in-situ TEM

Elucidating the synergistic effects of different energetic beams on the radiation response of nuclear materials is critical for developing an improved methodology for their evaluation when exposed to extreme environments. This article describes in-situ sequential (He implantation followed by Kr irradiation and vice-versa) and simultaneous (heavy ion Kr irradiation and He implantation) dual beam irradiations performed on tungsten at 1223 K. Dislocation loop density, average area, and total loop damage as a function of irradiation history and dose/fluence are quantified. The loop Burgers vectors and cavity damage (cavity density, size and total change in volume) are also determined at the final maximum dose for each condition. The loop damage evolution was different in all cases, with the smallest loop damage observed in the simultaneous experiment. Annihilation of Kr generated dislocation loops during He implantation in the Kr + He experiment was an unanticipated observation that may be explained by the dynamic evolution of dislocation loop sink strengths and time-dependent defect fluxes. Dislocation loop raft formation, denuded zones near extended defects, and cavity damage are compared across the different conditions. The phenomena observed and discussed in this work will stimulate further experimental and computational modeling activities leading to improved fundamental understanding of the irradiation response of nuclear materials under reactor-similar environments.

36 MATERIALS SCIENCE↗

On-shell interference effects in Higgs boson final states

Top quark loops in Higgs production via gluon fusion at large invariant final state masses can induce important interference effects in searches for additional Higgs bosons as predicted in, e.g., Higgs portal scenarios and the minimal supersymmetric Standard Model when the heavy scalar is broad or the final state resolution is poor. Currently, the limit setting as performed by both ATLAS and CMS is based on injecting a heavy Higgs-like signal neglecting interference effects. In this study, we perform a study of such “on-shell” interference effects in pp → ZZ and find that they lead to a ≲O(30%) width scheme-dependent modification of the signal strength. Finally, including the continuum contributions to obtain, e.g., the full pp → ZZ → 4l final state, this modification is reduced to the 10% level in the considered intermediate mass range.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

The $$\pi f_0(500)$$ decay of the $$a_1(1260)$$

Abstract We evaluate the $$a_1(1260) \rightarrow \pi \sigma (f_0(500))$$ a 1 ( 1260 ) → π σ ( f 0 ( 500 ) ) decay width from the perspective that the $$a_1(1260)$$ a 1 ( 1260 ) resonance is dynamically generated from the pseudoscalar–vector interaction and the $$\sigma $$ σ arises from the pseudoscalar–pseudoscalar interaction. A triangle mechanism with $$a_1(1260) \rightarrow \rho \pi $$ a 1 ( 1260 ) → ρ π followed by $$\rho \rightarrow \pi \pi $$ ρ → π π and a fusion of two pions within the loop to produce the $$\sigma $$ σ provides the mechanism for this decay under these assumptions for the nature of the two resonances. We obtain widths of the order of 13–22 MeV. Present experimental results differ substantially from each other, suggesting that extra efforts should be devoted to the precise extraction of this important partial decay width, which should provide valuable information on the nature of the axial vector and scalar meson resonances and help clarify the role of the $$\pi \sigma $$ π σ channel in recent lattice QCD calculations of the $$a_1$$ a 1 .

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Nonlinear and 3D plasmas. Final report

The project objectives are to characterize the nonlinear properties of edge instabilities in fusion plasmas from the standpoint of MHD and extended MHD models of plasmas and to develop, as much as possible, simplified models that may be useful for prediction and control.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Enabling co-simulation of tokamak plant models and plasma control systems

A system for connecting the Plasma Control System and a model of the tokamak Plant in closed loop co-simulation for plasma control development has been in routine use at DIII-D for more than 20 years and at other fusion labs that use variants of the DIII-D PCS for approximately the last decade. Here, co-simulation refers to the simultaneous execution of two independent codes with the exchange of data - Plant actuator commands and tokamak diagnostic data - between them during execution. Interest in this type of PCS-Plant simulation technology has also been growing recently at other fusion facilities. In fact, use of such closed loop control simulations is assumed to play an even larger role in the development of both the ITER Plasma Control System (PCS) and the experimental operation of the ITER device, where they will be used to support verification/validation of the PCS and also for ITER pulse schedule development and validation. We describe the key use cases that motivate the co-simulation capability and the features that must be provided by the Plasma Control System to support it. These features could be provided by the PCS itself or by a model of the PCS. If the PCS itself is chosen to provide them, there are requirements imposed on its architecture. If a PCS model is chosen, there are requirements imposed on the initial implementation of this simulation as well as long-term consequences for its continued development and maintenance. We describe these issues for each use case and discuss the relative merits of the two choices. Several examples are given illustrating uses of the co-simulation method to address problems of plasma control during the operation of DIII-D and of other devices that use the DIII-D PCS.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Liquid lithium applications for solving challenging fusion reactor issues and NSTX-U contributions

Steady-state fusion reactor operation presents major divertor technology challenges, including high divertor heat flux both steady-state and transients. In addition to those issues, there are unresolved issues of long term dust accumulation and associated tritium inventory and safety issues. It has been suggested that radiative liquid lithium divertor concepts with a modest lithium-loop could provide a possible solution for these outstanding fusion reactor technology issues while potentially improving the reactor plasma performance. The application of lithium (Li) in NSTX resulted in improved H-mode confinement, H-mode power threshold reduction, and reduction in the divertor peak heat flux while maintaining essentially Li-free core plasma operation even during H-modes. These promising results in NSTX and related modeling calculations motivated the radiative liquid lithium divertor (RLLD) concept and its variant, the active liquid lithium divertor concept (ARLLD), taking advantage of the enhanced Li radiation in relatively poorly confined divertor plasmas. It was estimated that only a few moles/sec of lithium injection would be needed to significantly reduce the divertor heat flux in a tokamak fusion power plant. By operating at lower temperatures ≤ 500°C than the first wall ~ 600 – 700°C, the LL-covered divertor chamber wall surfaces can serve as an effective particle pump, as impurities generally migrate toward lower temperature LL divertor surfaces. To maintain the LL purity, a closed LL loop system with a modest circulating capacity of ~ 1 liter/second (l/sec) is envisioned to sustain the steady-state operation of a 1 GW-electric class fusion power plant. By running the Li loop continuously, it can carry the dust particles and impurities generated in the vacuum vessel to outside where the dust / impurities are removed by relatively simple filter and cold/hot trap systems. Using a cold trap system, it can recover in tritium (T) in real time from LL at a rate of ~ 0.5 g / sec needed to sustain the fusion reaction while minimizing the T inventory issue. With an expected T fraction of ≤ 0.7 %, an acceptable level of T inventory can be achieved. In NSTX-U, preparations are now underway to elucidate the physics of Li plasma interactions with a number of Li application tools and Li radiation spectroscopic instruments. The NSTX-U Li evaporator which provides Li coating over the lower divertor plate, can offer important information on the RLLD concept, and the Li granule injector will test some of the key physics issue on the ARLLD concept. A LL-loop is also being prepared off line for prototyping future use on NSTX-U.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Rapidity-only TMD factorization at one loop

Typically, a production of a particle with a small transverse momentum in hadron-hadron collisions is described by CSS-based TMD factorization at moderate Bjorken x B ~ 1 and by k T -factorization at small x B . A uniform description valid for all x B is provided by rapidity-only TMD factorization developed in a series of recent papers at the tree level. In this paper the rapidity-only TMD factorization for particle production by gluon fusion is extended to the one-loop level.

deep inelastic scattering↗

Nuclear fusion powered Titan aircraft

This paper discusses a system for Titan exploration enabled by nuclear fusion power. Titan is one of the most interesting locations in the solar system with a thick atmosphere, surface oceans, under-ice oceans and complex terrain. This paper provides a conceptual design of a fusion-powered system to explore many parts of Titan and enable the use of high-power instruments. The design includes a fusion-powered orbital transfer vehicle and an electric Titan science aircraft. A Direct Fusion Drive (DFD) propulsive engine could bring a sizable spacecraft to Titan orbit in less than two years. A second fusion reactor, configured as a closed-loop power generator, would be used for an electric Titan science aircraft. Both reactors are based on the Princeton Field-Reversed Configuration (PFRC) concept which combines an FRC with a magnetic mirror. PFRC uses a novel radio-frequency plasma heating system and deuterium-helium-3 fuel. A lower temperature plasma flows around the closed-field FRC region removing the fusion products. In the DFD propulsive configuration, this secondary flow permits direct and variable thrust and exhaust velocity. The science aircraft would do a powered entry to Titan and then have the capability to fly anywhere on the moon at subsonic speeds. The DFD-powered transfer vehicle would allow the in-orbit transfer stage to change inclination as needed to cover different areas of the surface.

33 ADVANCED PROPULSION SYSTEMS↗

The molten salt tritium transport experiment: A pumped fluoride salt loop for hydrogen isotope experimentation

Molten salt reactors (MSRs) and fusion reactors propose to use molten salts as coolants and breeder blanket materials, respectively. Tritium, however, poses safety concerns in both reactor types due to its ability to permeate through reactor materials and potential for environmental release. This manuscript addresses the tritium transport phenomena in molten salts and presents the design and analysis of the Molten Salt Tritium Transport Experiment (MSTTE). MSTTE is a forced-convection fluoride salt loop intended to measure hydrogen isotope permeation through structural materials in a flowing salt system. In the first phase, MSTTE will use FLiNaK salt and deuterium as surrogates for FLiBe and tritium, with future plans to utilize tritium and FLiBe. MSTTE couples a Copenhagen Atomics pumped salt loop with an external test section that introduces hydrogen isotopes into the loop and measures transport phenomena. The Hydrogen Injection System (HIS) controls hydrogen isotope introduction into the molten salt loop. Here, the permeation test section measures the permeation rate through stainless steel tubing in contact with flowing salt. Computational fluid dynamics (CFD) analysis ensures fully developed salt flow in the permeation test section. MSTTE is modeled with MELCOR-TMAP to predict the permeation rate as a function of experimental variables such as source term, salt flow rate, and salt temperature. Results indicate that the source term is the only parameter with a significant effect on the permeation rate. Pressure drop analysis suggests that the loop should operate below 200 LPM to maintain a pressure drop below 200 kPa. Additionally, finite-element analysis assesses thermal stress during loop operation to ensure the experiment's safe design. MSTTE will provide semi-integral data on tritium transport phenomena in molten salts and serve as a testbed for advancing molten salt technology.

11 - NUCLEAR FUEL CYCLE AND FUEL MATERIALS↗

On the two-loop virtual QCD corrections to Higgs boson pair production in the standard model

Here, we compute the next-to-leading order virtual QCD corrections to Higgs-pair production via gluon fusion. We also present analytic results for the two-loop contributions to the spin-0 and spin-2 form factors in the amplitude. The reducible contributions, given by the double-triangle diagrams, are evaluated exactly while the two-loop irreducible diagrams are evaluated by an asymptotic expansion in heavy top-quark mass up to and including terms of O(1/m$8\atop{t}$). We estimate that mass effects can reduce the hadronic cross section by at most 10 %, assuming that the finite top-quark mass effects are of similar size in the entire range of partonic energies.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Survey of Multifidelity Methods in Uncertainty Propagation, Inference, and Optimization

In many situations across computational science and engineering, multiple computational models are available that describe a system of interest. These different models have varying evaluation costs and varying fidelities. Typically, a computationally expensive high-fidelity model describes the system with the accuracy required by the current application at hand, while lower-fidelity models are less accurate but computationally cheaper than the high-fidelity model. Outer-loop applications, such as optimization, inference, and uncertainty quantification, require multiple model evaluations at many different inputs, which often leads to computational demands that exceed available resources if only the high-fidelity model is used. This work surveys multifidelity methods that accelerate the solution of outer-loop applications by combining high-fidelity and low-fidelity model evaluations, where the low-fidelity evaluations arise from an explicit low-fidelity model (e.g., a simplified physics approximation, a reduced model, a data-fit surrogate) that approximates the same output quantity as the high-fidelity model. The overall premise of these multifidelity methods is that low-fidelity models are leveraged for speedup while the high-fidelity model is kept in the loop to establish accuracy and/or convergence guarantees. We categorize multifidelity methods according to three classes of strategies: adaptation, fusion, and filtering. The paper reviews multifidelity methods in the outer-loop contexts of uncertainty propagation, inference, and optimization.

97 MATHEMATICS AND COMPUTING↗

In situ study on radiation response of tungsten manufactured by laser powder bed fusion

Tungsten (W) produced by laser powder bed fusion (LPBF) was examined by in situ Krypton (Kr) ion irradiation at 400 °C up to 2.52 displacements per atom (dpa) to investigate its radiation response. Dislocation loops with identical Burgers vectors form aligned raft structures, inducing significant grain misorientation accumulation. Defect saturation was observed beyond 0.36 dpa, marked by constant loop density and raft spacing. WO 3 nanoparticles are found in the as-printed matrix and served as efficient defect sinks. Dislocation loops were absorbed at the W/WO 3 interface, facilitating defect annihilation and suppressing defect accumulation. In conclusion, these findings highlight the role of LPBF microstructure and oxide interfaces in mediating radiation-induced defect evolution, offering insights for designing radiation tolerant W-based materials.

Defect sink↗

Loops in 4+1d topological phases

2+1d topological phases are well characterized by the fusion rules and braiding/exchange statistics of fractional point excitations. In 4+1d, some topological phases contain only fractional loop excitations. What kind of loop statistics exist? We study the 4+1d gauge theory with 2-form \mathbb{Z}_2 ℤ 2 gauge field (the loop-only toric code) and find that while braiding statistics between two different types of loops can be nontrivial, the self “exchange” statistics are all trivial. In particular, we show that the electric, magnetic, and dyonic loop excitations in the 4+1d toric code are not distinguished by their self-statistics. They tunnel into each other across 3+1d invertible domain walls which in turn give explicit unitary circuits that map the loop excitations into each other. The SL(2, \mathbb{Z}_2 ℤ 2 ) symmetry that permutes the loops, however, cannot be consistently gauged and we discuss the associated obstruction in the process. Moreover, we discuss a gapless boundary condition dubbed the “fractional Maxwell theory” and show how it can be Higgsed into gapped boundary conditions. We also discuss the generalization of these results from the \mathbb{Z}_2 ℤ 2 gauge group to \mathbb{Z}_N ℤ N .

Chen, Xie↗