Search NASA⌕ Search

SEARCH · Search NASA

Results for “morphometric analysis”

Search indexed NASA NTRS and DOE OSTI research on propulsion, heat transfer, battery materials and energy systems. Follow report and document links to the original sources.

Quote a phrase for an exact phrase match. Source license links do not imply unrestricted reuse.

At least 55 records · Page 3
All sourcesNASA NTRSDOE OSTI
NASA NTRS1998

[Characteristics of morphogenesis of the Japanese quail embryos during microgravity]

Experiments performed in the period of 1995-1996 cooperatively with US investigators within the MIR/SHUTTLE and MIR/NASA space science projects continued exploration of avian embryogenesis in microgravity. Evaluation of Japanese quail embryos incubated in spaceflight microgravity showed that for the most part they were normally developed and compliant with duration of incubation. One of the major morphometric characteristics of embryo are its mass and size. Comparative analysis of body mass values in the space and laboratory and synchronous control groups pointed to a slight retardation. Body length of space embryos mimicked their mass curve. Data on the dynamics of mass and length of Japanese quail embryos support the well-known theory according to which growth and formation are distinguished by equifinality. No differences were revealed by the investigations of individual parts of embryonic bodies in the space and control groups. However, this finding was true only with regard to the embryos that had no developmental abnormalities. A part of embryos had defective eyes (microphtalmia), limbs (twisted fingers), and beaks.

manned↗
DOE OSTI2025

Automated segmentation of soft X-ray tomography: Native cellular structure with submicron resolution at high-throughput for whole-cell quantitative imaging in yeast

Soft X-ray tomography (SXT) is an invaluable tool for quantitatively analyzing cellular structures at suboptical isotropic resolution. However, it has traditionally depended on manual segmentation, limiting its scalability for large datasets. Here, we leverage a deep learning-based autosegmentation pipeline to segment and label cellular structures in hundreds of cells across three Saccharomyces cerevisiae strains. This task-based pipeline uses manual iterative refinement to improve segmentation accuracy for key structures, including the cell body, nucleus, vacuole, and lipid droplets, enabling high-throughput and precise phenotypic analysis. Using this approach, we quantitatively compared the three-dimensional (3D) whole-cell morphometric characteristics of wild-type, VPH1-GFP, and vac14 strains, uncovering detailed strain-specific cell and organelle size and shape variations. We show the utility of SXT data for precise 3D curvature analysis of entire organelles and cells and detection of fine morphological features using surface meshes. Our approach facilitates comparative analyses with high spatial precision and statistical throughput, uncovering subtle morphological features at the single-cell and population level. This workflow significantly enhances our ability to characterize cell anatomy and supports scalable studies on the mesoscale, with applications in investigating cellular architecture, organelle biology, and genetic research across diverse biological contexts.

Chen, Jianhua [Lawrence Berkeley National Laborato↗
NASA NTRS1988

The structure of the Martian cryolithosphere upper levels

Structural inhomogeneities of the Martian cryolithosphere upper levels were studied by the proposed crater method. On the basis of analysis of 127 photomaps of 1:2 million scale morphological and morphometrical parameters of all the fresh craters larger than 1 km in diameter with fluidized ejecta and without it were investigated. Using the parameters of the craters, the roof depths of ice-bearing rocks were estimated and the data on the ice relative constant in the excavated permafrost layer were obtained. These data were used for the construction of maps of the boundary depth between ice-free nearsurface layer and ice-bearing rocks. A series of maps of the relative ice content for individual permafrost horizons was constructed. It was deduced from the obtained maps that the zone of the dryest nearsurface rocks on Mars is in the latitude belt + or - 30 degrees where maximum floor depths of the ice-bearing rocks vary from 400 to more than 400 m. It was found that the thickness of ice-free rocks in the Southern Hemisphere is larger than in the Northern one. The tendency of similarity of latitudinal zonality observed both on the maps of the minimal and mean roof depths may be considered as an indicator of structural stability of upper horizons of the Martian cryolithosphere down to the depths of 300 to 400 m. The areas of minimal ice content in the nearsurface layers coincide with the zone of maximum thickness of ice-free rocks. The ice relative content in Martian rocks becomes systematically higher from 30 deg latitude to the polars. The same tendency is observed in depth. The data obtained may be useful for the selecting of landing sites for Mars samples return and other missions.

Kuzmin, R. O.↗
NASA NTRS2004

Lunar and Planetary Science XXXV: Mars

The session "Mars" included the following reports:Tentative Theories for the Long-Term Geological and Hydrological Evolution of Mars; Stratigraphy of Special Layers Transient Ones on Permeable Ones: Examples from Earth and Mars; Spatial Analysis of Rootless Cone Groups on Iceland and Mars; Summer Season Variability of the North Residual Cap of Mars from MGS-TES; Spectral and Geochemical Characteristics of Lake Superior Type Banded Iron Formation: Analog to the Martian Hematite Outcrops; Martian Wave Structures and Their Relation to Mars; Shape, Highland-Lowland Chemical Dichotomy and Undulating Atmosphere Causing Serious Problems to Landing Spacecrafts; Shear Deformation in the Graben Systems of Sirenum Fosssae, Mars: Preliminary Results; Components of Martian Dust Finding on Terrestrial Sedimentary Deposits with Use of Infrared Spectra; Morphologic and Morphometric Analyses of Fluvial Systems in the Southern Highlands of Mars; Light Pattern and Intensity Analysis of Gray Spots Surrounding Polar Dunes on Mars; The Volume of Possible Ancient Oceanic Basins in the Northern Plains of Mars MARSES: Possibilities of Long-Term Monitoring Spatial and Temporal Variations and Changes of Subsurface Geoelectrical Section on the Base; Results of the Geophysical Survey Salt/Water Interface and Groundwater Mapping on the Marina Di Ragusa, Sicily and Shalter Island, USA ;A Miniature UV-VIS Spectrometer for the Surface of Mars; Automatic Recognition of Aeolian Ripples on Mars; Absolute Dune Ages and Implications for the Time of Formation of Gullies in Nirgal Vallis, Mars; Diurnal Dust Devil Behaviour for the Viking 1 Landing Site: Sols 1 to 30; Topography Based Surface Age Computations for Mars: A Step Toward the Formal Proof of Martian Ocean Recession, Timing and Probability; Gravitational Effects of Flooding and Filling of Impact Basins on Mars; Viking 2 Landing Site in MGS/MOC Images South Polar Residual Cap of Mars: Features, Stratigraphy, and Changes.

Source record↗
DOE OSTI2023

Artificial intelligence-empowered cellular morphometric risk score improves prognostic stratification of cutaneous squamous cell carcinoma

Abstract Background Risk stratification of cutaneous squamous cell carcinoma (cSCC) is essential for managing patients. Objectives To determine if artificial intelligence and machine learning might help to stratify patients with cSCC by risk using more than solely clinical and histopathological factors. Methods We retrieved a retrospective cohort of 104 patients whose cSCCs had been excised with clear margins. Clinical and histopathological risk factors were evaluated. Haematoxylin and eosin-stained slides were scanned and analysed by an algorithm based on the stacked predictive sparse decomposition technique. Cellular morphometric biomarkers (CMBs) were identified via machine learning and used to derive a cellular morphometric risk score (CMRS) that classified cSCCs into clusters of differential prognoses. Concordance analysis, sensitivity, specificity, positive predictive value (PPV), negative predictive value (NPV) and accuracy were calculated and compared with results obtained with the Brigham and Women’s Hospital (BWH) staging system. The performance of the combination of the BWH staging system and the CMBs was also analysed. Results There were no differences among the CMRS groups in terms of clinical and histopathological risk factors and T-stage assignment, but there were significant differences in prognosis. Combining the CMRS with BWH staging systems increased distinctiveness and improved prognostic performance. C-indices were 0.91 local recurrence and 0.91 for nodal metastasis when combining the two approaches. The NPV was 94.41% and 96.00%, the PPV was 36.36% and 41.67%, and accuracy reached 86.75% and 89.16%, respectively, with the combined approach. Conclusions CMRS is helpful for cSCC risk stratification beyond classic clinical and histopathological risk features. Combining the information from the CMRS and the BWH staging system offers outstanding prognostic performance for patients with high-risk cSCC.

Pérez-Baena, Manuel J.↗
NASA NTRS1992

Effect of spaceflight on rat hepatocytes - A morphometric study

Hepatic tissue from flight, synchronous, vivarium, and tail-suspended rats was examined by light microscopy and computer-assisted image analysis. Glycogen levels in flight rats were found to be significantly elevated over those in controls. Lipid was also higher but not significantly different. Hepatocytes appeared larger in flight animals because of area attributed to increased glycogen. Sinusoids were less prominent in flight animals than in controls. The total Kupffer cell population appeared to be reduced in flight animals and may represent changes in defensive capacity of the liver. Alterations in the storage of glycogen and number of Kupffer cells suggest an important effect of spacefligtht on the function of the liver that may have important implications for long-term spaceflight.

Racine, Richard N.↗
NASA NTRS1986

Morphology of large valleys on Hawaii - Evidence for groundwater sapping and comparisons with Martian valleys

Morphometric data on the runoff and sapping valleys on the slopes of Hawaii and Molokai in Hawaii are analyzed. The analysis reveals a clear distinction between the runoff valleys and sapping valleys. The Hawaiian sapping valleys are characterized by: (1) steep valley walls and flat floors, (2) amphitheater heads, (3) low drainage density, (4) paucity of downstream tributaries, (5) low frequency of up-dip tributaries, and (6) structural and stratigraphic control on valley patterns. The characteristics of the Hawaiian sapping valleys are compared to Martian valleys and experimental systems, and good correlation between the data is detected. Flume experiments were also conducted to study the evolution of sapping valleys in response to variable structure and stratigraphy.

Kochel, R. Craig↗
NASA NTRS1976

Automatic recognition and analysis of synapses

An automatic system for recognizing synaptic junctions would allow analysis of large samples of tissue for the possible classification of specific well-defined sets of synapses based upon structural morphometric indices. In this paper the three steps of our system are described: (1) cytochemical tissue preparation to allow easy recognition of the synaptic junctions; (2) transmitting the tissue information to a computer; and (3) analyzing each field to recognize the synapses and make measurements on them.

Ungerleider, J. A.↗
NASA NTRS2024

Morphometric Characterization of Lunar Landing Sites

As ambitious surface exploration of the Moon commences in the 2020s, it is important to develop reliable and objective metrics for understanding the quality of future landing sites. A key prerequisite for any exploration and utilization of the lunar surface is a safe landing. One of the most important methods to provide understanding of potential metrics for landing site safety in the lunar context is the systematic comparison of candidate and historic landing sites. The goal of this project is to determine the morphometric parameters of the lunar surface at 16 successful lunar landing sites where adequate data exists to execute a quantitative comparison using various parameters. Quantitative analysis of Lunar Reconnaissance Orbiter (LRO) data should inform mission planning activities by providing morphologic metrics for landing sites including slope, Terrain Ruggedness Index (TRI), and rock abundance. These comparisons will assist mission planners and exploration scientists by providing “calibration points” for using Lunar Reconnaissance Orbiter (LRO) data to successfully plan and execute lunar powered descents in the future. The metrics included in this analysis describe the form of the terrain and can be calculated for any potential future landing site. Another objective of this project is to determine how the derived morphologic parameters for the same landing site change between common pixel scales. In ideal lighting conditions, 2m/px Narrow Angle Camera Digital Terrain Models (NAC DTMs) can be assembled using stereoscopic imagery from two or more concentric orbits of the LRO. However, due to low light conditions near the lunar poles, the highest quality data for many potential lunar landing sites comes from the Lunar Orbiter Laser Altimeter (LOLA). Therefore, we seek to assess how the derived slope and TRI values change as a function of changes in the DTM postings from 2m/px to 5m/px.

J M McCallion↗
NASA NTRS1990

Experiment K-6-06. Morphometric and EM analyses of tibial epiphyseal plates from Cosmos 1887 rats

Light and electron microscopy studies were carried out on decalcified tibial epiphyseal plates of rats flown aboard Cosmos 1887 (12.5d flight plus 53.5h recovery). Analysis of variance showed that the proliferative zone of flight animals was significantly higher than that of synchronous controls, while the hypertrophic/calcification zone was significantly reduced. Flight animals had more cells than synchronous controls in the proliferative zone, and less in the hypertrophic/calcification region. The total number of cells, however, was significantly higher in flight animals. No differences were found for perimeter or shape factor of growth plates, but area was significantly lower in flight animals in comparison to synchronous controls. Collagen fibrils in flight animals were shorter and wider than in synchronous controls. The time required for a cell to cycle through the growth plate is 2 to 3 days, so most of the cells and matrix present were formed after the animals had returned to 1 g, and probably represent stages of recovery from microgravity exposure, which in itself is an interesting question.

Duke, P. J.↗
NASA NTRS2004

How High is that Dune? A Comparison of Methods Used to Constrain the Morphometry of Aeolian Bedforms on Mars

Methods traditionally used to estimate the relative height of surface features on Mars include: photoclinometry, shadow length and stereography. The MOLA data set enables a more accurate assessment of the surface topography of Mars. However, many small-scale aeolian bedforms remain below the sample resolution of the MOLA data set. In response to this a number of research teams have adopted and refined existing methods and applied them to high resolution (2-6 m/pixel) narrow angle MOC satellite images. Collectively, the methods provide data on a range of morphometric parameters (many not previously available for dunes on Mars). These include dune height, width, length, surface area, volume, longitudinal and cross profiles). This data will facilitate a more accurate analysis of aeolian bedforms on Mars. In this paper we undertake a comparative analysis of methods used to determine the height of aeolian dunes and ripples.

Bourke, M.↗
NASA NTRS2004

Analysis of Orientation-dependence of Martian Gullies

The recent discovery of small Martian gullies has stimulated debate about the role that water plays on the Martian surface under current or recent conditions. Of critical importance in evaluating various gully hypotheses is reliable morphometric and orientation data. The former centers on such questions as whether the water (or another fluid) emanated from a surface or sub-surface source and the duration of flow. The latter ties into whether solar insolation has an important effect on formation of the initial water source and subsequent mobilization. Initial studies of gullies indicated a poleward orientation dependence, an observation which has recently been challenged. Herein we investigate the orientation of Martian gullies and the dependence of various parameters on the orientation. Whereas previous studies have been global or through most of the southern hemisphere, we focus on several specific regions. This approach offers some advantages in that regional variations are factored out, such that of lithology, ground water table depth (if any), surface thermal properties, and other parameters are more or less the same in a given region. Differences in gully attributes as a function of orientation within a region can more easily be attributable to solar insolation effects than is the case for global statistics. We use the orientation to constrain several classes of gully formation hypotheses. 1) A favored orientation toward the pole across all regions could indicate a process dominated by melting of cold trapped ice, snow, or condensed volatiles from incident sunlight during summer under current conditions. 2) Variations among all regions would be more consistent with mechanisms less strongly tied to current solar insolation, such as geothermal heating of ice. 3) Favored orientations within specific regions, but differing among regions, could indicate a preference for poleward ices and melting, with orientation being a function of age and dependent on variations in obliquity and precision. We find that the gullies fall into either categories 2 or 3, but not 1, indicating the recent melting of cold trapped condensates is unlikely the sole formation mechanism.

Mohan, S.↗
NASA NTRS1990

Mobilifilum chasei: morphology and ecology of a spirochete from an intertidal stratified microbial mat community

Spirochetes were found in the lower anoxiphototrophic layer of a stratified microbial mat (North Pond, Laguna Figueroa, Baja California, Mexico). Ultra-structural analysis of thin sections of field samples revealed spirochetes approximately 0.25 micrometer in diameter with 10 or more periplasmic flagella, leading to the interpretation that these spirochetes bear 10 flagellar insertions on each end. Morphometric study showed these free-living spirochetes greatly resemble certain symbiotic ones, i.e., Borrelia and certain termite spirochetes, the transverse sections of which are presented here. The ultrastructure of this spirochete also resembles Hollandina and Diplocalyx (spirochetes symbiotic in arthropods) more than it does Spirochaeta, the well known genus of mud-dwelling spirochetes. The new spirochete was detected in mat material collected both in 1985 and in 1987. Unique morphology (i.e., conspicuous outer coat of inner membrane, large number of periplasmic flagella) and ecology prompt us to name a new free-living spirochete.

Non-NASA Center↗
DOE OSTI2023

Pan-cancer evaluation of clinical value of mitotic network activity index (MNAI) and its predictive value for immunotherapy

Increased mitotic activity is associated with the genesis and aggressiveness of many cancers. To assess the clinical value of mitotic activity as prognostic biomarker, we performed a pan-cancer study on the mitotic network activity index (MNAI) constructed based on 54-gene mitotic apparatus network. Our pan-cancer assessment on TCGA (33 tumor types, 10,061 patients) and validation on other publicly available cohorts (23 tumor types, 9,209 patients) confirmed the significant association of MNAI with overall survival, progression-free survival, and other prognostic endpoints in multiple cancer types, including lower-grade gliomas (LGG), breast invasive carcinoma (BRCA), as well as many others. We also showed significant association between MNAI and genetic instability, which provides a biological explanation of its prognostic impact at pan-cancer landscape. Our association analysis revealed that patients with high MNAI benefitted more from anti-PD-1 and Anti-CTLA-4 treatment. In addition, we demonstrated that multimodal integration of MNAI and the AI-empowered Cellular Morphometric Subtypes (CMS) significantly improved the predictive power of prognosis compared to using MNAI and CMS alone. Our results suggest that MNAI can be used as a potential prognostic biomarker for different tumor types toward different clinical endpoints, and multimodal integration of MNAI and CMS exceeds individual biomarker for precision prognosis.

60 APPLIED LIFE SCIENCES↗
NASA NTRS2006

A Comparison of Methods Used to Estimate the Height of Sand Dunes on Mars

The collection of morphometric data on small-scale landforms from other planetary bodies is difficult. We assess four methods that can be used to estimate the height of aeolian dunes on Mars. These are (1) stereography, (2) slip face length, (3) profiling photoclinometry, and (4) Mars Orbiter Laser Altimeter (MOLA). Results show that there is good agreement among the methods when conditions are ideal. However, limitations inherent to each method inhibited their accurate application to all sites. Collectively, these techniques provide data on a range of morphometric parameters, some of which were not previously available for dunes on Mars. They include dune height, width, length, surface area, volume, and longitudinal and transverse profiles. Thc utilization of these methods will facilitate a more accurate analysis of aeolian dunes on Mars and enable comparison with dunes on other planetary surfaces.

Bourke, M. C.↗
NASA NTRS1987

Fluvial valleys on Martian volcanoes

Channels and valleys were known on the Martian volcanoes since their discovery by the Mariner 9 mission. Their analysis has generally centered on interpretation of possible origins by fluvial, lava, or viscous flows. The possible fluvial dissection of Martian volcanoes has received scant attention in comparison to that afforded outflow, runoff, and fretted channels. Photointerpretative, mapping, and morphometric studies of three Martian volcanoes were initiated: Ceraunius Tholus, Hecate Tholus, and Alba Patera. Preliminary morphometric results indicate that, for these three volcanoes, valley junction angles increase with decreasing slope. Drainage densities are quite variable, apparently reflecting complex interactions in the landscape-forming factors described. Ages of the Martian volcanoes were recently reinterpreted. This refined dating provides a time sequence in which to evaluate the degradational forms. An anomaly has appeared from the initial study: fluvial valleys seem to be present on some Martian volcanoes, but not on others of the same age. Volcanic surfaces characterized only by high permeability lava flows may have persisted without fluvial dissection.

Baker, Victor R.↗
NASA NTRS1971

Height-depth ratios of lunar and terrestrial craters.

Quantitative analysis of Gilbert's (1893) observation regarding the surface geometry of lunar craters and terrestrial calderas. Topographic measurements were made using the ratio of exterior rim height to interior crater depth, and then extended to other types of crater. The morphometric data obtained as well as those presented elsewhere (Murray et al., 1970; Guest and Murray, 1969) verify Gilbert's contention that terrestrial calderas and most rimmed lunar craters are entirely unrelated phenomena. Auxiliary characteristics previously interpreted in terms of primary volcanic cratering on the moon are either of nonendogenic origin or are secondary endogenic features superposed on initial impact landforms (Pike, 1967).

Pike, R. J.↗