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Exploring Environmental and Aerosol Impacts on Maritime Tropical Convection using Airborne Radiometer, Radar, Lidar, and Dropsondes

The field deployment phase of NASA’s Cloud, Aerosol and Monsoon Processes Philippines Experiment (CAMP2Ex) took place around the Philippines during August–October 2019, with the primary goal of jointly investigating aerosols and tropical meteorology at the micro-β to meso-β scales. A suite of instruments was deployed on NASA’s P-3B Orion aircraft to accomplish this mission, including: the Advanced Microwave Precipitation Radiometer (AMPR), Airborne Precipitation and cloud Radar 3rd Generation (APR-3), High Spectral Resolution Lidar 2 (HSRL2), and Advanced Vertical Atmospheric Profiling System (AVAPS) dropsondes. To examine potential aerosol influences on maritime tropical convection, P-3 flight segments throughout CAMP2Ex were binned into similar environmental groups using “low,” “medium,” and “high” values of nine AVAPS-derived parameters with known physical connections to convective frequency and/or intensity. Aerosol concentrations in each flight segment were evaluated using three HSRL2 variables at 355 and 532 nm: aerosol backscatter, aerosol extinction, and aerosol optical thickness. A set of radiometer- and radar-derived variables directly related to convective frequency and/or intensity was used to characterize convection, which included: AMPR-derived integrated cloud liquid water; polarization-corrected temperatures at 10.7, 19.35, 37.1, and 85.5 GHz; peak equivalent radar reflectivity factor (ZH); peak height of 30-dBZ ZH; and the number of radar data columns with composite ZH > 30 dBZ. The ZH analyses were performed using both Ku- and Ka-band APR-3 data. For each flight segment, correlation coefficients were calculated between each convective parameter and aerosol concentrations within the “low,” “medium,” and “high” groups for each environmental variable. The environmental stratification thresholds were then varied in a series of sensitivity tests. Several noteworthy correlations were observed between the convective and aerosol parameters within the environmental groups, especially when stratifying the environments based on their 850–500-hPa temperature lapse rate, 700–500-hPa temperature lapse rate, and K-Index. The convective parameters were often correlated most strongly with 355-nm extinction, 532-nm extinction, and 532-nm backscatter, while the presence of precipitation-sized liquid and ice hydrometeors contributed to some unexpected negative correlations. In general, as environmental conditions became more favorable for convection, a stronger correlation was observed between the convective parameters and aerosol concentrations. However, a “Goldilocks” zone of medium aerosol concentration was correlated most strongly with the convective parameters in many cases. These results stress the importance of considering environmental and aerosol conditions together when evaluating their impacts on convection. This presentation will provide a detailed discussion of these results and their implications, a summary of the limitations associated with such an analysis, and suggestions for future work.

Corey G. Amiot↗

Data compression using adaptive transform coding. Appendix 1: Item 1

Adaptive low-rate source coders are described in this dissertation. These coders adapt by adjusting the complexity of the coder to match the local coding difficulty of the image. This is accomplished by using a threshold driven maximum distortion criterion to select the specific coder used. The different coders are built using variable blocksized transform techniques, and the threshold criterion selects small transform blocks to code the more difficult regions and larger blocks to code the less complex regions. A theoretical framework is constructed from which the study of these coders can be explored. An algorithm for selecting the optimal bit allocation for the quantization of transform coefficients is developed. The bit allocation algorithm is more fully developed, and can be used to achieve more accurate bit assignments than the algorithms currently used in the literature. Some upper and lower bounds for the bit-allocation distortion-rate function are developed. An obtainable distortion-rate function is developed for a particular scalar quantizer mixing method that can be used to code transform coefficients at any rate.

Rost, Martin Christopher↗

Successful Validation of Sample Processing and Quantitative Real-Time PCR Capabilities on the International Space Station

The WetLab-2 system was developed by NASA Ames Research Center to offer new capabilities to researchers. The system can lyse cells and extract RNA (Ribonucleic Acid) on-orbit from different sample types ranging from microbial cultures to animal tissues. The purified RNA can then either be stabilized for return to Earth or can be used to conduct on-orbit quantitative Reverse Transcriptase PCR (Polymerase Chain Reaction) (qRT-PCR) analysis without the need for sample return. The qRT-PCR results can be downlinked to the ground a few hours after the completion of the run. The validation flight of the WetLab-2 system launched on SpaceX-8 on April 8, 2016. On orbit operations started on April 15th with system setup and was followed by three quantitative PCR runs using an E. coli genomic DNA template pre-loaded at three different concentrations. These runs were designed to discern if quantitative PCR functions correctly in microgravity and if the data is comparable to that from the ground control runs. The flight data showed no significant differences compared to the ground data though there was more variability in the values, this was likely due to the numerous small bubbles observed. The capability of the system to process samples and purify RNA was then validated using frozen samples prepared on the ground. The flight data for both E. coli and mouse liver clearly shows that RNA was successfully purified by our system. The E. coli qRT-PCR run showed successful singleplex, duplex and triplex capability. Data showed high variability in the resulting Cts (Cycle Thresholds [for the PCR]) likely due to bubble formation and insufficient mixing during the procedure run. The mouse liver qRT-PCR run had successful singleplex and duplex reactions and the variability was slightly better as the mixing operation was improved. The ability to purify and stabilize RNA and to conduct qRT-PCR on-orbit is an important step towards utilizing the ISS as a National Laboratory facility. The ability to get on-orbit data will provide investigators with the opportunity to adjust experimental parameters in real time without the need for sample return and re-flight. The WetLab-2 Project is supported by the Research Integration Office in the ISS Program.

gene expression↗

Successful Validation of Sample Processing and Quantitative Real-Time PCR Capabilities on the International Space Station

The WetLab-2 system was developed by NASA Ames Research Center to offer new capabilities to researchers. The system can lyse cells and extract RNA (Ribonucleic Acid) on-orbit from different sample types ranging from microbial cultures to animal tissues. The purified RNA can then either be stabilized for return to Earth or can be used to conduct on-orbit quantitative Reverse Transcriptase PCR (Polymerase Chain Reaction) (qRT-PCR) analysis without the need for sample return. The qRT-PCR results can be downlinked to the ground a few hours after the completion of the run. The validation flight of the WetLab-2 system launched on SpaceX-8 on April 8, 2016. On orbit operations started on April 15th with system setup and was followed by three quantitative PCR runs using an E. coli genomic DNA template pre-loaded at three different concentrations. These runs were designed to discern if quantitative PCR functions correctly in microgravity and if the data is comparable to that from the ground control runs. The flight data showed no significant differences compared to the ground data though there was more variability in the values, this was likely due to the numerous small bubbles observed. The capability of the system to process samples and purify RNA was then validated using frozen samples prepared on the ground. The flight data for both E. coli and mouse liver clearly shows that RNA was successfully purified by our system. The E. coli qRT-PCR run showed successful singleplex, duplex and triplex capability. Data showed high variability in the resulting Cts (Cycle Thresholds [for the PCR]) likely due to bubble formation and insufficient mixing during the procedure run. The mouse liver qRT-PCR run had successful singleplex and duplex reactions and the variability was slightly better as the mixing operation was improved. The ability to purify and stabilize RNA and to conduct qRT-PCR on-orbit is an important step towards utilizing the ISS as a National Laboratory facility. The ability to get on-orbit data will provide investigators with the opportunity to adjust experimental parameters in real time without the need for sample return and re-flight. The WetLab-2 Project is supported by the Research Integration Office in the ISS Program.

quantitative PCR↗

A single-channel model does not predict visibility of asynchronous gratings

A single channel model is shown to lack the capability to predict the visibility of asynchronous compound gratings. A constant Beta was assumed, based on Monte-Carlo simulations, and used to show that an SE of 6.73 (Limb, 1981) lies outside of an acceptable confidence interval. Potential imbalances between two eyes cannot be as large as 1.5 dB, which can only affect one eye, or one region of a retina. An average unbalance of 0.53 dB (SE = 0.12) employed in experiments to measure thresholds was compensated for by estimated threshold reductions. Trial-to-trial variability was included in the single channel model, as were considerations of retinal inhomogeneity. Temporal sensitivity for 2 and 4 c/deg grating patches were measured, and the amplitude response of a single channel at the two spatial frequencies was obtained. Threshold reductions with a Beta of 3.1 are then determined to not be significant enough to warrant adoption of the single channel model predictions.

Watson, A. B.↗

Interactions Between Thresholds and Spatial Discretizations of Snow: Insights From Estimates of Wolverine Denning Habitat in the Colorado Rocky Mountains

Thresholds can be used to interpret environmental data in a way that is easily communicated and useful for decision making purposes. However, thresholds are often developed for specific data products and time periods, changing findings when the same threshold is applied to datasets or periods with different characteristics. Here, we test the impact of different spatial discretizations of snow on annual estimates of wolverine denning opportunities in the Colorado Rocky Mountains, defined using a snow water equivalent (SWE) threshold (0.20 m) and threshold date (15 May) from previous habitat assessments. Annual potential wolverine denning area (PWDA) was thresholded from a 36-year (1985 – 2020) snow reanalysis model with three different spatial discretizations: 1) 480 m grid cells (D480), 2) 90 m grid cells (D90), and 3) 480 m grid cells with implicit representations of subgrid snow spatial heterogeneity (S480). Relative to the D480 and S480 discretizations, D90 resolved shallower snow deposits on slopes between 3050 and 3350 m elevation, decreasing PWDA by 10%, on average. In years with warmer and/or drier winters, S480 discretizations with subgrid representations of snow heterogeneity increased PWDA, even within grid cells where mean 15 May SWE was less than the SWE threshold. These simulations increased PWDA by upwards of 30% in low snow years, as compared to the D480 and D90 simulations without subgrid snow heterogeneity. Despite PWDA sensitivity to different snow spatial discretizations, PWDA was controlled more by annual variations in winter precipitation and temperature. However, small changes to the SWE threshold (± 0.07 m) and threshold date (± 2 weeks) also affected PWDA by as much as 82%. Across these threshold ranges, PWDA was approximately 18% more sensitive to the SWE threshold than the threshold date. However, the sensitivity to the threshold date was larger in years with late spring snowfall, when PWDA depended on whether modeled SWE was thresholded before, during, or after spring snow accumulation. Our results demonstrate that snow thresholds are useful but may not always provide a complete picture of the annual variability in snow-adapted wildlife denning opportunities. Studies thresholding spatiotemporal datasets could be improved by including 1) information about the fidelity of thresholds across multiple spatial discretizations, and 2) uncertainties related to ranges of realistic thresholds.

Justin M. Pflug↗

The atmosphere as a research window - Signal or noise

The interpretation of measurements by instruments with FOV that are large enough to contain pronounced radiometric variations is discussed, focusing on the retrieval of cloud properties from satellite radiance measurements. Examples are presented for three retrieval approaches. The use of a physical principle to establish a relationship between the measurement and the desired parameter is shown for cirrus-cloud optical depth and precipitation from passive microwave measurements. Examples of the use of inherent variability of the atmosphere and the statistical character of this variability are the spatial covariance method and the threshold method. Also, two examples using a hybrid of these two methods are presented. It is shown that the natural variability (noise) within the instrument FOV biases the relationship between the measurement and the parameter of interest which would be predicted by simple one-dimensional radiative-transfer theory. It is suggested that the noise of the measurement also contains signal, forming the basis for hybrid methods.

Stephens, Graeme L.↗

Correcting Attenuation of Reflectivity in Terminal Doppler Weather Radar

This paper documents the implementation of the algorithm for correcting attenuations in the TDWR reflectivity, and examines the impacts of performing the correction algorithm on the accuracy of the resultant precipitation products on the basis of stage IV gauge-radar analyses over six storm events (four warm season events and two cool season events). Three primary findings are summarized below: 1. Correcting for attenuation tends to improve the overall bias, the conditional bias, and the correlation between the TDWR-based rainfall estimates and stage IV values regardless of season and correction schemes. 2. Attenuation correction is overall beneficial to the accuracy of resulting rainfall estimates for the warm season. By contrast, for the cool season, despite potential improvements in the bias and correlation, attenuation correction can be undesirable when there is clear evidence of bright band enhancement arising from low freezing levels. To elaborate, in these situations spurious high precipitation rates over the melting layer can yield elevated values in specific attenuation factor K, which in turn, may lead to an artificially higher reflectivity adjustment at farther range. 3. Ingesting 3-D spatially variable RUC temperature and imposing a temperature threshold in general tend to degrade the accuracy of corrected rainfall estimates for the warm season. For the cool season, in theory they would help avoid applying correction to areas within and above the melting layer. In practice, due to the variable depth of the melting layer below the freezing level, it is difficult to determine the temperature for the lower boundary of the melting layer a priori.

Ding, Feng↗

The effects of sinusoidal interference on the second-order carrier tracking loop preceded by a bandpass limiter in the Block 4 receiver

Drop-lock relationships for the second-order phase-locked loop are derived when the carrier and a sinusoidal signal lie within the predetection filter bandwidth of the Block 4 receiver. Limiter suppression factors are calculated when a bandpass hard limiter is used to maintain constant total power at the loop. The parameters of interest are the interference-to-signal power ratio (ISR), the input signal-to-noise power ratio (NSR), and the interference signal frequency offset from carrier delta f. Limiter suppression caused by the combined effects of the noise and the interference signal accounts for the variability in the drop-lock threshold for given values of the input SNR and ISR parameters. Going beyond earlier published work that focused on the limiter's effect on the drop-lock threshold; an account is made for the limiter action in the interference mode and an overall imporvement is provided in the prediction accuracy of the drop-lock model.

Ruggier, C. J.↗

SeaWiFS Technical Report Series. Volume 7: Cloud screening for polar orbiting visible and infrared (IR) satellite sensors

Methods for detecting and screening cloud contamination from satellite derived visible and infrared data are reviewed in this document. The methods are applicable to past, present, and future polar orbiting satellite radiometers. Such instruments include the Coastal Zone Color Scanner (CZCS), operational from 1978 through 1986; the Advanced Very High Resolution Radiometer (AVHRR); the Sea-viewing Wide Field-of-view Sensor (SeaWiFS), scheduled for launch in August 1993; and the Moderate Resolution Imaging Spectrometer (IMODIS). Constant threshold methods are the least demanding computationally, and often provide adequate results. An improvement to these methods are the least demanding computationally, and often provide adequate results. An improvement to these methods is to determine the thresholds dynamically by adjusting them according to the areal and temporal distributions of the surrounding pixels. Spatial coherence methods set thresholds based on the expected spatial variability of the data. Other statistically derived methods and various combinations of basic methods are also reviewed. The complexity of the methods is ultimately limited by the computing resources. Finally, some criteria for evaluating cloud screening methods are discussed.

Darzi, Michael↗

Transient Liquefaction on the Lunar or Martian Surface Operational Demonstration

The Cryogenic Fluid In-situ Liquefaction for Landers (CryoFILL) activity has been investigating concepts for the liquefaction of cryogenic fluids produced on the surface of the Moon and Mars. Liquefaction testing of oxygen in a scaled lander tank using an integrated, industrial cryocooler system was completed. The testing covered the determination of the nominal performance operation of the system, constant liquefaction performance, and transient liquefaction performance. The goal of the testing was to demonstrate cryogenic liquefaction operational capabilities on the Lunar and Martian surfaces for landers and In Situ Resource Utilization. The testing met all key performance parameter threshold values including liquefaction rate (demonstrated 1.6 kg/hr compared to threshold of 1.1 kg/hr), number of variables as transient (goal of 3: liquefaction flow, environmental temperature, and cryocooler input power – all demonstrated), and number of fill levels (goal of 3: < 5%, 50%, and 90% - all demonstrated). Key testing results from oxygen liquefaction testing will be discussed including sensitivities provided by the analysis team.

Liquefaction↗

LDPC Codes with Minimum Distance Proportional to Block Size

Low-density parity-check (LDPC) codes characterized by minimum Hamming distances proportional to block sizes have been demonstrated. Like the codes mentioned in the immediately preceding article, the present codes are error-correcting codes suitable for use in a variety of wireless data-communication systems that include noisy channels. The previously mentioned codes have low decoding thresholds and reasonably low error floors. However, the minimum Hamming distances of those codes do not grow linearly with code-block sizes. Codes that have this minimum-distance property exhibit very low error floors. Examples of such codes include regular LDPC codes with variable degrees of at least 3. Unfortunately, the decoding thresholds of regular LDPC codes are high. Hence, there is a need for LDPC codes characterized by both low decoding thresholds and, in order to obtain acceptably low error floors, minimum Hamming distances that are proportional to code-block sizes. The present codes were developed to satisfy this need. The minimum Hamming distances of the present codes have been shown, through consideration of ensemble-average weight enumerators, to be proportional to code block sizes. As in the cases of irregular ensembles, the properties of these codes are sensitive to the proportion of degree-2 variable nodes. A code having too few such nodes tends to have an iterative decoding threshold that is far from the capacity threshold. A code having too many such nodes tends not to exhibit a minimum distance that is proportional to block size. Results of computational simulations have shown that the decoding thresholds of codes of the present type are lower than those of regular LDPC codes. Included in the simulations were a few examples from a family of codes characterized by rates ranging from low to high and by thresholds that adhere closely to their respective channel capacity thresholds; the simulation results from these examples showed that the codes in question have low error floors as well as low decoding thresholds. As an example, the illustration shows the protograph (which represents the blueprint for overall construction) of one proposed code family for code rates greater than or equal to 1.2. Any size LDPC code can be obtained by copying the protograph structure N times, then permuting the edges. The illustration also provides Field Programmable Gate Array (FPGA) hardware performance simulations for this code family. In addition, the illustration provides minimum signal-to-noise ratios (Eb/No) in decibels (decoding thresholds) to achieve zero error rates as the code block size goes to infinity for various code rates. In comparison with the codes mentioned in the preceding article, these codes have slightly higher decoding thresholds.

Divsalar, Dariush↗

Detection of Vegetation Trends in Highly Variable Environments After Grazing Exclusion in Mongolia

Aims: Environmental variability (e.g. in precipitation) has a large effect on vegetation dynamics, and this often makes it difficult to assess the recovery of vegetation after a disturbance. In this study, we assessed vegetation recovery trends in response to grazing exclusion while considering for the annual environmental variability. Location: Two regions with highly variable precipitation: a steppe near Mandalgobi, in Mongolia's Central Gobi province, and a desert steppe near Bulgan, in Mongolia's South Gobi province. Methods: Changes in vegetation were observed along grazing gradients at the above two sites, and vegetation thresholds were identified. We established reference plots in pre-threshold areas along the grazing gradients. We removed the impact of livestock grazing at various locations along the grazing gradients by establishing exclosures, and investigated vegetation from 2005 to 2013. We developed a smoothed hierarchical model within a Bayesian framework, and examined the effect of grazing exclusion on vegetation, focusing especially on the extent of grass cover recovery. In addition, we compared soil nutrient conditions in the reference plots and inside and outside each exclosure along the grazing gradients. Results: Temporal trends in the cover of perennial grass in each plot inside and outside of the exclosures largely coincided, irrespective of grazing intensity, and exclosure had no effect (Bulgan) or a negative effect (Mandalgobi) on vegetation recovery. Soil nutrient content was not significantly affected by exclosure at a given distance from the grazing source, but decreased significantly with decreasing grazing intensity. Thus, recovery of the land from a post-threshold state may not be apparent even after 9 yr of grazing exclusion in environments with highly variable precipitation. Conclusion: The effect of exclosure duration on perennial grass cover was limited, even after controlling for environmental variability. Once a vegetation threshold has been crossed, merely removing livestock from the landscape may not be sufficient for that area to recover.

Bayesian statistics;Drought;Environmental variabil↗

Vertical displacement threshold sensitivity along the horizontal meridian as a function of stimulus rate, duration, and length

Four independent variables of visual perception during binocular viewing were studied. In 24 observers, the vertical displacement threshold (DT) sensitivity along the horizontal meridian was determined as a function of the rate, duration, and length of the stimulus. It was found that the DT increases with an increased angular separation of the stimulus image from the fovea (i.e., the stimulus must move farther in order to be correctly discriminated as having moved). In addition, it was found that the sensitivity to the stimulus displacement increases with increasing of the stimulus length, duration, and/or angular rate. These findings are related to the design optimization of dynamic attitude displays and symbology for aircraft.

Haines, Richard F.↗

Facilities for Biological Research Aboard the International Space Station

A centrifuge designed as part of an integrated biological facility for installation onboard the International Space Station is presented. The requirements for the 2.5 m diameter centrifuge, which is designed for the support of biological experiments are discussed. The scientific objectives of the facility are to: provide a means of conducting fundamental studies in which gravitational acceleration is a controllable variable; provide a 1g control; determine the threshold acceleration for physiological response, and determine the value of centrifugation as a potential countermeasure for the biomedical problems associated with space flight. The implementation of the facility is reported on, and the following aspects of the facility are described: the host resources systems supply requirements such as power and data control; the habitat holding rack; the life sciences glove box; the centrifuge; the different habitats for cell culture, aquatic studies, plant research and insect research; the egg incubator, and the laboratory support equipment.

Souza, Kenneth A.↗

Quantifying Global Uncertainties in a Simple Microwave Rainfall Algorithm

While a large number of methods exist in the literature for retrieving rainfall from passive microwave brightness temperatures, little has been written about the quantitative assessment of the expected uncertainties in these rainfall products at various time and space scales. The latter is the result of two factors: sparse validation sites over most of the world's oceans, and algorithm sensitivities to rainfall regimes that cause inconsistencies against validation data collected at different locations. To make progress in this area, a simple probabilistic algorithm is developed. The algorithm uses an a priori database constructed from the Tropical Rainfall Measuring Mission (TRMM) radar data coupled with radiative transfer computations. Unlike efforts designed to improve rainfall products, this algorithm takes a step backward in order to focus on uncertainties. In addition to inversion uncertainties, the construction of the algorithm allows errors resulting from incorrect databases, incomplete databases, and time- and space-varying databases to be examined. These are quantified. Results show that the simple algorithm reduces errors introduced by imperfect knowledge of precipitation radar (PR) rain by a factor of 4 relative to an algorithm that is tuned to the PR rainfall. Database completeness does not introduce any additional uncertainty at the global scale, while climatologically distinct space/time domains add approximately 25% uncertainty that cannot be detected by a radiometer alone. Of this value, 20% is attributed to changes in cloud morphology and microphysics, while 5% is a result of changes in the rain/no-rain thresholds. All but 2%-3% of this variability can be accounted for by considering the implicit assumptions in the algorithm. Additional uncertainties introduced by the details of the algorithm formulation are not quantified in this study because of the need for independent measurements that are beyond the scope of this paper. A validation strategy for these errors is outlined.

Kummerow, Christian↗

A Distributed Prognostic Health Management Architecture

This paper introduces a generic distributed prognostic health management (PHM) architecture with specific application to the electrical power systems domain. Current state-of-the-art PHM systems are mostly centralized in nature, where all the processing is reliant on a single processor. This can lead to loss of functionality in case of a crash of the central processor or monitor. Furthermore, with increases in the volume of sensor data as well as the complexity of algorithms, traditional centralized systems become unsuitable for successful deployment, and efficient distributed architectures are required. A distributed architecture though, is not effective unless there is an algorithmic framework to take advantage of its unique abilities. The health management paradigm envisaged here incorporates a heterogeneous set of system components monitored by a varied suite of sensors and a particle filtering (PF) framework that has the power and the flexibility to adapt to the different diagnostic and prognostic needs. Both the diagnostic and prognostic tasks are formulated as a particle filtering problem in order to explicitly represent and manage uncertainties; however, typically the complexity of the prognostic routine is higher than the computational power of one computational element ( CE). Individual CEs run diagnostic routines until the system variable being monitored crosses beyond a nominal threshold, upon which it coordinates with other networked CEs to run the prognostic routine in a distributed fashion. Implementation results from a network of distributed embedded devices monitoring a prototypical aircraft electrical power system are presented, where the CEs are Sun Microsystems Small Programmable Object Technology (SPOT) devices.

Bhaskar, Saha↗

Computer simulation of the threshold sensitivity determinations

A computer simulation study was carried out to evaluate various methods for determining threshold stimulus levels for impact sensitivity tests. In addition, the influence of a number of variables (initial stimulus level, particular stimulus response curve, and increment size) on the apparent threshold values and on the corresponding population response levels was determined. Finally, a critical review of previous assumptions regarding the stimulus response curve for impact testing is presented in the light of the simulation results.

Gayle, J. B.↗