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529 records · Page 30

CRISPR protein inhibitors

The embodiments disclosed herein utilize fluorescence polarization based preliminary screen to identify a putative set of Cas inhibitors from an initial set of candidate inhibitors. The primary screening assay is followed by secondary screening assay to validate the putative set of inhibitors selected by the preliminary screen. In some embodiments, the present disclosure includes compositions and methods are provided for the inhibition of the function of RNA guided endonucleases, including the identification and use of such inhibitors.

Choudhary, Amit↗

Compositions and methods for regulating proteins and nucleic acids activities

Compositions and methods for conditionally regulating activities of CRISPR-Cas systems. In some embodiments, the methods comprise providing an inactive guide RNA comprising a regulatory domain bound by a lock nucleic acid different from the guide RNA; and displacing the lock nuclei acid from the regulatory domain by a trigger nucleic acid, thereby activating the guide RNA, wherein the activated guide RNA forms a complex with a Cas enzyme.

Choudhary, Amit↗

Smokescreen: A Python package for data vector blinding and encryption in cosmological analyses

Smokescreen is an open-source Python library for data-vector concealment (blinding) in cosmological analyses. Data-vector blinding works by applying cosmology-dependent shifts to the observed data vector, moving it away from the true cosmological signal without affecting its statistical properties, so that analysts cannot infer the true result until the analysis is frozen and the blinding is lifted. The package computes these shifts using Firecrown likelihoods applied to data vectors stored in the SACC format, ensuring that the theoretical model used for blinding is identical to that used for inference whilst remaining agnostic to the specific observable being blinded. To prevent accidental unblinding, the original SACC file, containing the true cosmology, is encrypted. Although developed for the Vera C. Rubin Observatory Legacy Survey of Space and Time (LSST), Smokescreen is applicable to any experiment using Firecrown likelihoods and the SACC data format.

Loureiro, Arthur [Stockholm U., OKC; Imperial Coll↗

The General Antiparticle Spectrometer (GAPS) Antarctic Balloon Payload

The General Antiparticle Spectrometer (GAPS) is an Antarctic stratospheric balloon mission designed to provide unmatched sensitivity to low-energy (<0.25 GeV/n) cosmic-ray antiprotons, antideuterons, and antihelium nuclei as signatures of dark matter. The distinctive GAPS particle identification technique relies on measuring the energy loss along the track of an incoming antinucleus as it slows down and is captured into an exotic atom, and then detecting the de-excitation X-rays and the nuclear annihilation products. This measurement is realized using a Tracker composed of more than 1000 custom silicon strip detectors and a plastic scintillator time-of-flight (TOF) system instrumenting more than 40m$^2$. Together, these subsystems provide the velocity and energy resolution, stopping power, particle tracking, and X-ray identification necessary to distinguish rare antinucleus signals from the abundant positive-nucleus backgrounds, all within the constraints of a high-altitude mission. A multi-loop capillary heat pipe system has been developed to maintain the tracker operating temperature with significant mass and power savings over a conventional pump-based system. The first GAPS science payload flew for 25 days during the 2025/26 NASA Antarctic balloon campaign. We detail the design, integration, and commissioning of the payload prior to flight.

Aoyama, Kazutaka [JAXA, Sagamihara]↗

An upgraded frequency-selectable laser source (FLS) calibrator for CMB bandpass characterization

One of the biggest challenges for Cosmic Microwave Background (CMB) experiments comes from the uncertainty in instrument bandpass calibration. Uncertainties in bandpass can limit foreground removal and spectral fitting, which are critical for inflationary and galaxy cluster measurements. CMB experiments currently use Fourier Transform Spectrometers (FTSes) to measure instrument bandpasses. However, FTS systems are currently systematics-limited, so significant improvements in bandpass measurements require novel calibrators. To this end, we developed a Frequency-selectable Laser Source (FLS) calibrator, which uses a laser with adjustable frequency coupled to a system that allows for laser power attenuation. Following initial testing with the first FLS prototype, we developed an upgraded version of the calibrator with improved performance. We present the upgrades to the FLS calibrator, the characterization of the upgraded calibrator and new laser source, and plans for testing with microwave instruments in the field.

Saunders, Lauren J. [Fermilab] (ORCID:000000016367↗

Fisher Forecasting for the DESC with $\texttt{Augur}$

The Vera C. Rubin Observatory Legacy Survey of Space and Time (LSST) has begun its ten-year survey of the entire visible southern hemisphere. To ensure robust cosmological measurements, computationally inexpensive investigations of modeling choices must be made to gauge the performance of proposed cosmological analyses. In this paper, we introduce the $\texttt{Augur}$ tool of the Dark Energy Science Collaboration (DESC), which provides Fisher forecasts for cosmological inference for the LSST using software frameworks designed for DESC science. We test the pipeline by comparing it to forecasts produced by external code and direct sampling of the posterior via nested sampling methods, finding good agreement between all methods. We additionally investigate a range of modeling and hyperparameter choices for a 3$\times$2pt investigation in harmonic space, providing users with diagnostics to obtain reliable forecasts. $\texttt{Augur}$ will be continually updated to be compatible with the other tools in the DESC software ecosystem as additional probes and functionality become available.

Rogozenski, Paul [Carnegie Mellon U.; Arizona U.] ↗