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At least 559 records · Page 31

Distributed and communication-efficient solutions to linear equations with special sparse structure

In this paper we report two distributed and communication-efficient algorithms based on the multi-agent system are proposed to solve a system of linear equations with the Laplacian sparse system matrix. One algorithm is based on the gradient descent method in optimization. In this algorithm, the agents only share partial information instead of all of their collective state vectors to save significant communication. The other algorithm is obtained by approximating Newton’s method for a faster convergence rate. Although it requires twice as much communication as the first one, it is still communication-efficient given the low dimension of the information shared among agents. The convergence at a linear rate is proved for both algorithms, and a comprehensive comparison of their convergence rate, communication burden, and computation costs is also performed. The proposed algorithms can be applied to various systems to solve those problems that can be modeled as a system of linear equations with a Laplacian sparse system matrix. Simulation results with the electric power system illustrate their effectiveness.

42 ENGINEERING↗

Quasielastic least-squares reverse time migration of PS reflections

Conventional analysis of amplitude variation with offset for elastic PS reflections is based on analytical reflection coefficients in a layered medium, and wave-equation-based PS migration is mainly used to produce a structural image. To overcome this problem, we have developed a least-squares reverse time migration (LSRTM) method for elastic PS reflections based on a quasielastic wave equation. Here, the quasielastic wave equation can accurately model PS reflections with elastic amplitudes under the first-order Born approximation. Our LSRTM method inverts for perturbations of the S-wave velocity and density by minimizing the L 2 norm of the difference between recorded and predicted PS reflections modeled using a quasielastic wave equation. We refer to our new method as quasielastic LSRTM of PS reflections. Numerical tests on synthetic and field data indicate that our method can properly handle the amplitudes of elastic PS reflections and provides an accurate estimate of the perturbations of S-wave velocity and density. Extending the method to the 3D case is not straightforward and might require incorporating certain PS data processing techniques into the inversion itself.

58 GEOSCIENCES↗

Finite-Difference Methods for Fractional Differential Equations of Order 1/2

In this work, we study approximations of solutions of fractional differential equations of order 1/2. We present a new method of approximation and obtain the order of convergence. The presentation is given within the abstract framework of a semidiscrete approximation scheme, which includes finite-element methods, finite-difference schemes, and projection methods.

97 MATHEMATICS AND COMPUTING↗

QMCPACK: Advances in the development, efficiency, and application of auxiliary field and real-space variational and diffusion quantum Monte Carlo

We review recent advances in the capabilities of the open source ab initio Quantum Monte Carlo (QMC) package QMCPACK and the workflow tool Nexus used for greater efficiency and reproducibility. The auxiliary field QMC (AFQMC) implementation has been greatly expanded to include k-point symmetries, tensor-hypercontraction, and accelerated graphical processing unit (GPU) support. These scaling and memory reductions greatly increase the number of orbitals that can practically be included in AFQMC calculations, increasing the accuracy. Advances in real space methods include techniques for accurate computation of bandgaps and for systematically improving the nodal surface of ground state wavefunctions. Results of these calculations can be used to validate application of more approximate electronic structure methods, including GW and density functional based techniques. To provide an improved foundation for these calculations, we utilize a new set of correlation-consistent effective core potentials (pseudopotentials) that are more accurate than previous sets; these can also be applied in quantum-chemical and other many-body applications, not only QMC. These advances increase the efficiency, accuracy, and range of properties that can be studied in both molecules and materials with QMC and QMCPACK.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

On modeling subgrid-scale macro-structures in narrow twisted channels

Porosity-based subgrid topography models often fail to capture the effects of subgrid-scale topographic features in the interior of coarse grid cells. Existing approaches that modify bottom roughness or a drag coefficient are inadequate for macro-structures (large emergent or submerged obstacles) in subgrid-scale narrow twisted channels. Such structures partially block the cross-sectional area and provide enhanced topographic dissipation – effects that are not well represented by a drag coefficient that scales on a coarse-grid cell-averaged velocity and the cell volume. The relative alignment between mesh and flow further complicates this problem as it makes the subgrid model sensitive to mesh design. In the present study, three new approaches for simulating subgrid-scale macro-structures in narrow channels are proposed. The interior partial-blocking effect of structures is modeled as reduction of grid face-area. The sheltering of flow volumes around obstacles, which leads to topographic dissipation, is modeled by reducing the cell volume in the momentum equation (only). A mesh-shift procedure is designed to optimize mesh alignment for identifiable subgrid features. Combining the three subgrid methods improves the approximation of surface elevation and in-channel flow rate with a coarse-grid model. Tests are conducted for channelized flow using both synthetic domains and real marsh topography. Finally, the new methods reduce the overall mesh dependency of the subgrid model and provides stronger physical connection between effects of macro-structures and their geometry at coarse grid scales.

42 ENGINEERING↗

Numerically exact generalized Green's function cluster expansions for electron-phonon problems

We generalize the family of approximate momentum average methods to formulate a numerically exact, convergent hierarchy of equations whose solution provides an efficient algorithm to compute the Green's function of a particle dressed by bosons suitable in the entire parameter regime. We use this approach to extract ground-state properties and spectral functions. Our approximation-free framework, dubbed the generalized Green's function cluster expansion (GGCE), allows access to exact numerical results in the extreme adiabatic limit, where many standard methods struggle or completely fail. We showcase the performance of the method, specializing three important models of charge-boson coupling in solids and molecular complexes: the molecular Holstein model, which describes coupling between charge density and local distortions, the Peierls model, which describes modulation of charge hopping due to intersite distortions, and a more complex Holstein + Peierls system with couplings to two different phonon modes, paradigmatic of charge-lattice interactions in organic crystals. Furthermore, the GGCE serves as an efficient approach that can be systematically extended to different physical scenarios, thus providing a tool to model the frequency dependence of dressed particles in realistic settings.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Dependence of the structure and dynamics of liquid silicon on the choice of density functional approximation

In addition to its technological relevance, silicon poses a challenge for first principles simulations because it undergoes a semiconductor-to-metal transition upon melting. Moreover, the resulting metallic liquid contains a mixture of metallic and covalent bonding. This coexistence of fundamentally different interactions is difficult to describe within approximate density functional methods, which oftentimes cannot accurately describe these two extremes simultaneously. Here, we report an investigation of the structure, dynamics, and thermodynamics of liquid silicon using ab initio molecular dynamics simulations with three density functional approximations: the local density approximation, the Perdew-Burke-Ernzerhof generalized gradient approximation, and the strongly constrained and appropriately normed (SCAN) meta-generalized gradient approximation. We demonstrate that SCAN describes this liquid with better accuracy than the other often-used functionals because it can simultaneously capture covalent and metallic bonding with similar high accuracy.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Electron impact ionization in dense plasmas

Here, the distorted-wave with exchange (DWE) method is employed to evaluate electron impact ionization cross sections in dense electron–ion plasmas. Bound and continuum electron wave functions are obtained from a non-relativistic average-atom code. Plots of DWE cross sections are presented for 1s electrons in Li and Be plasmas and 2p electrons in Na and Mg plasmas. For each of these elements, cross sections are evaluated at metallic density in a range of temperatures from 10 to 100 eV and at their respective melting points. Resonances in the cross sections appear near the incident energy threshold at high temperatures. The origin of these resonances is discussed. In general, the distorted wave (DW) method without exchange is found to be a good approximation to the DWE method for electron impact ionization calculations. In the resonance region, however, exchange effects are found to be very important and cannot be neglected.

74 ATOMIC AND MOLECULAR PHYSICS↗

Accuracy and convergence properties of the fixed-stress iterative solution of two-way coupled poromechanics

Here, the paper deals with the numerical solution of Biot's equations of coupled consolidation obtained by a mixed formulation combining continuous Galerkin finite–element and multipoint flux approximation finite–volume methods. The solution algorithm relies on the recently developed fixed–stress solution scheme, in which first the flow problem and then the mechanical one are addressed iteratively. We show that the algorithm can be interpreted as a particular block triangular preconditioning strategy applied within a Richardson iteration. The key component to the success of the preconditioner is the sparse approximation to the Schur complement based on a pressure space mass matrix scaled by a weighting factor that depends element–wise on the inverse of a suitable bulk modulus. The accuracy of the method is assessed, making use of well–known analytical solutions from the literature. Numerical results demonstrate robustness and low computational cost of the fixed–stress scheme in accurately capturing the two–way coupling between deformation and pressure.

58 GEOSCIENCES↗

Dispersion characteristics of planar grating with arbitrary grooves for terahertz Smith-Purcell radiation

In this paper, a novel method of getting the dispersion relations in planar grating with arbitrary grooves for terahertz Smith-Purcell radiation is investigated analytically. The continuous profile of the groove is approximately replaced by a series of rectangular steps. By making use of field matches method and the continuity of transverse admittance, the universal dispersion equation for grating with arbitrarily shaped grooves is derived. By solving the dispersion equation in presence of electron beam, the growth rate is obtained directly and the dependence on beam parameters is analyzed. Comparisons of the dispersion characteristics among some special groove shapes have been made by numerical calculation. The results show that the rectangular-step approximation method provides a novel approach to obtain the universal dispersion relation for grating with arbitrary grooves for Smith-Purcell radiation.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

Electron-ion collision-frequency for x-ray Thomson scattering in dense plasmas

Two methods are presented to calculate the electron-ion collision-frequency in dense plasmas using an average-atom model. The first one is based on the Kubo-Greenwood approach. The second one uses the Born and Lenard-Balescu approximations. The two methods are used to calculate x-ray Thomson scattering spectra. Illustrations are shown for dense beryllium and aluminum plasmas. Comparisons with experiment are presented in the case of an x-ray Thomson scattering spectrum.

70 PLASMA PHYSICS AND FUSION TECHNOLOGY↗

A Fresh Math Perspective Opens New Possibilities for Computational Chemistry

By reformulating the TDDFT problem as a matrix function approximation, making use of a special transformation and taking advantage of the underlying symmetry with respect to a non-Euclidean metric, Yang and his colleagues were able to apply the Lanczos algorithm and a Kernal Polynomial Method (KPM) to approximate the absorption spectrum of several molecules. Both of these algorithms require relatively low-memory compared to non-symmetrical alternatives, which is the key to the computational savings.

Vu, Linda↗

A data-driven sensor placement approach for detecting voltage violations in distribution systems

Stochastic fluctuations in power injections from distributed energy resources (DERs) combined with load variability can cause constraint violations (e.g., exceeded voltage limits) in electric distribution systems. To monitor grid operations, sensors are placed to measure important quantities such as the voltage magnitudes. Here, in this paper, we consider a sensor placement problem which seeks to identify locations for installing sensors that can capture all possible violations of voltage magnitude limits. We formulate a bilevel optimization problem that minimizes the number of sensors and avoids false sensor alarms in the upper level while ensuring detection of any voltage violations in the lower level. This problem is challenging due to the nonlinearity of the power flow equations and the presence of binary variables. Accordingly, we employ recently developed conservative linear approximations of the power flow equations that overestimate or underestimate the voltage magnitudes. By replacing the nonlinear power flow equations with conservative linear approximations, we can ensure that the resulting sensor locations and thresholds are sufficient to identify any constraint violations. Additionally, we apply various problem reformulations to significantly improve computational tractability while simultaneously ensuring an appropriate placement of sensors. Lastly, we improve the quality of the results via an approximate gradient descent method that adjusts the sensor thresholds. We demonstrate the effectiveness of our proposed method for several test cases, including a system with multiple switching configurations.

24 POWER TRANSMISSION AND DISTRIBUTION↗

A composite neural network that learns from multi-fidelity data: Application to function approximation and inverse PDE problems

Presently the training of neural networks relies on data of comparable accuracy but in real applications only a very small set of high-fidelity data is available while inexpensive lower fidelity data may be plentiful. We propose a new composite neural network (NN) that can be trained based on multi-fidelity data. It is comprised of three NNs, with the first NN trained using the low-fidelity data and coupled to two high-fidelity NNs, one with activation functions and another one without, in order to discover and exploit nonlinear and linear correlations, respectively, between the low-fidelity and the high-fidelity data. We first demonstrate the accuracy of the new multi-fidelity NN for approximating some standard benchmark functions but also a 20-dimensional function that is not easy to approximate with other methods, e.g. Gaussian process regression. Subsequently, we extend the recently developed physics-informed neural networks (PINNs) to be trained with multi-fidelity data sets (MPINNs). MPINNs contain four fully-connected neural networks, where the first one approximates the low-fidelity data, while the second and third construct the correlation between the low- and high-fidelity data and produce the multi-fidelity approximation, which is then used in the last NN that encodes the partial differential equations (PDEs). Specifically, by decomposing the correlation into a linear and nonlinear part, the present model is capable of learning both the linear and complex nonlinear correlations between the low- and high-fidelity data adaptively. By training the MPINNs, we can: (1) obtain the correlation between the low- and high-fidelity data, (2) infer the quantities of interest based on a few scattered data, and (3) identify the unknown parameters in the PDEs. In particular, we employ the MPINNs to learn the hydraulic conductivity field for unsaturated flows as well as the reactive models for reactive transport. The results demonstrate that MPINNs can achieve relatively high accuracy based on a very small set of high-fidelity data. Despite the relatively low dimension and limited number of fidelities (two-fidelity levels) for the benchmark problems in the present study, the proposed model can be readily extended to very high-dimensional regression and classification problems involving multi-fidelity data.

71 CLASSICAL AND QUANTUM MECHANICS, GENERAL PHYSIC↗

A Novel Method for Phasor Measurement Unit Sampling Time Error Compensation

This paper focuses on a novel method for successive approximation register analog to digital converter control in synchronized phasor measurement units (PMUs). To compensate for the sampling time error caused by the division remainder between the desirable sampling rate and the oscillator frequency, a variable sampling interval control method is presented by interlacing two integers under a proposed criterion. The frequency of the onboard oscillator is monitored in real-time using the pulse per second (PPS) timing reference from global positioning system. The sampling control is adaptively adjusted each second according to the latest estimated oscillator frequency. The “saw tooth” in phasor angle error and DC offset and spikes in frequency error can be effectively eliminated by applying the proposed method. The simulation and experiment results validate the effectiveness and accuracy of the proposed method, which is believed to be able to greatly improve the performance of PPS-disciplined synchronous sampling methods in PMUs.

24 POWER TRANSMISSION AND DISTRIBUTION↗

Basis adaptive sample efficient polynomial chaos (BASE-PC)

For a large class of orthogonal basis functions, there has been a recent identification of expansion methods for computing accurate, stable approximations of a quantity of interest. Here this paper presents, within the context of uncertainty quantification, a practical implementation using basis adaptation, and coherence motivated sampling, which under assumptions has satisfying guarantees. This implementation is referred to as Basis Adaptive Sample Efficient Polynomial Chaos (BASE-PC). A key component of this is the use of anisotropic polynomial order which admits evolving global bases for approximation in an efficient manner, leading to consistently stable approximation for a practical class of smooth functionals. This fully adaptive, non-intrusive method, requires no a priori information of the solution, and has satisfying theoretical guarantees of recovery. A key contribution to stability is the use of a presented correction sampling for coherence-optimal sampling in order to improve stability and accuracy within the adaptive basis scheme. Theoretically, the method may dramatically reduce the impact of dimensionality in function approximation, and numerically the method is demonstrated to perform well on problems with dimension up to 1000.

97 MATHEMATICS AND COMPUTING↗

Computational simulation of vibrationally resolved spectra for spin‐forbidden transitions

Abstract In this computational study, we illustrate a method for computing phosphorescence and circularly polarized phosphorescence spectra of molecular systems, which takes into account vibronic effects including both Franck‐Condon and Herzberg‐Teller contributions. The singlet and triplet states involved in the phosphorescent emission are described within the harmonic approximation, and the method fully takes mode‐mixing effects into account when evaluating Franck‐Condon integrals. Spin‐orbit couplings, which are responsible for these otherwise forbidden phenomena, are accounted for by means of a relativistic two‐component time‐dependent density functional theory method. The model is applied to two types of chiral systems: camphorquinone, a rigid organic system that allows for an extensive benchmark, and some members of a class of iridium complexes. The merits and shortcomings of the methods are discussed, and some perspectives for future developments are offered.

Egidi, Franco↗

Automatic software correction of residual aberrations in reconstructed HRTEM exit waves of crystalline samples

Abstract We develop an automatic and objective method to measure and correct residual aberrations in atomic-resolution HRTEM complex exit waves for crystalline samples aligned along a low-index zone axis. Our method uses the approximate rotational point symmetry of a column of atoms or single atom to iteratively calculate a best-fit numerical phase plate for this symmetry condition, and does not require information about the sample thickness or precise structure. We apply our method to two experimental focal series reconstructions, imaging a β-Si 3 N 4 wedge with O and N doping, and a single-layer graphene grain boundary. We use peak and lattice fitting to evaluate the precision of the corrected exit waves. We also apply our method to the exit wave of a Si wedge retrieved by off-axis electron holography. In all cases, the software correction of the residual aberration function improves the accuracy of the measured exit waves.

36 MATERIALS SCIENCE↗