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At least 559 records · Page 31

Mitochondrial Hsp90 is a ligand-activated molecular chaperone coupling ATP binding to dimer closure through a coiled-coil intermediate

Heat-shock protein of 90 kDa (Hsp90) is an essential molecular chaperone that adopts different 3D structures associated with distinct nucleotide states: a wide-open, V-shaped dimer in the apo state and a twisted, N-terminally closed dimer with ATP. Although the N domain is known to mediate ATP binding, how Hsp90 senses the bound nucleotide and facilitates dimer closure remains unclear. In this paper we present atomic structures of human mitochondrial Hsp90 N (TRAP1 N ) and a composite model of intact TRAP1 revealing a previously unobserved coiled-coil dimer conformation that may precede dimer closure and is conserved in intact TRAP1 in solution. Our structure suggests that TRAP1 normally exists in an autoinhibited state with the ATP lid bound to the nucleotide-binding pocket. ATP binding displaces the ATP lid that signals the cis-bound ATP status to the neighboring subunit in a highly cooperative manner compatible with the coiled-coil intermediate state. We propose that TRAP1 is a ligand-activated molecular chaperone, which couples ATP binding to dramatic changes in local structure required for protein folding.

59 BASIC BIOLOGICAL SCIENCES↗

DISCOVERING THE MISSING 2.2 < z < 3 QUASARS BY COMBINING OPTICAL VARIABILITY AND OPTICAL/NEAR-INFRARED COLORS

The identification of quasars in the redshift range 2.2 < z < 3 is known to be very inefficient because the optical colors of such quasars are indistinguishable from those of stars. Recent studies have proposed using optical variability or near-infrared (near-IR) colors to improve the identification of the missing quasars in this redshift range. Here we present a case study combining both methods. We select a sample of 70 quasar candidates from variables in Sloan Digital Sky Survey (SDSS) Stripe 82, which are non-ultraviolet excess sources and have UKIDSS near-IR public data. They are clearly separated into two parts on the Y - K/g - z color-color diagram, and 59 of them meet or lie close to a newly proposed Y - K/g - z selection criterion for z < 4 quasars. Of these 59 sources, 44 were previously identified as quasars in SDSS DR7, and 35 of them are quasars at 2.2 < z < 3. We present spectroscopic observations of 14 of 15 remaining quasar candidates using the Bok 2.3 m telescope and the MMT 6.5 m telescope, and successfully identify all of them as new quasars at z = 2.36-2.88. We also apply this method to a sample of 643 variable quasar candidates with SDSS-UKIDSS nine-band photometric data selected from 1875 new quasar candidates in SDSS Stripe 82 given by Butler and Bloom based on the time-series selections, and find that 188 of them are probably new quasars with photometric redshifts at 2.2 < z < 3. Our results indicate that the combination of optical variability and optical/near-IR colors is probably the most efficient way to find 2.2 < z < 3 quasars and is very helpful for constructing a complete quasar sample. We discuss its implications for ongoing and upcoming large optical and near-IR sky surveys.

79 ASTRONOMY AND ASTROPHYSICS↗

THE MASS OF Kepler-93b AND THE COMPOSITION OF TERRESTRIAL PLANETS

Kepler-93b is a 1.478 ± 0.019 R {sub ⊕} planet with a 4.7 day period around a bright (V = 10.2), astroseismically characterized host star with a mass of 0.911 ± 0.033 M {sub ☉} and a radius of 0.919 ± 0.011 R {sub ☉}. Based on 86 radial velocity observations obtained with the HARPS-N spectrograph on the Telescopio Nazionale Galileo and 32 archival Keck/HIRES observations, we present a precise mass estimate of 4.02 ± 0.68 M {sub ⊕}. The corresponding high density of 6.88 ± 1.18 g cm{sup –3} is consistent with a rocky composition of primarily iron and magnesium silicate. We compare Kepler-93b to other dense planets with well-constrained parameters and find that between 1 and 6 M {sub ⊕}, all dense planets including the Earth and Venus are well-described by the same fixed ratio of iron to magnesium silicate. There are as of yet no examples of such planets with masses >6 M {sub ⊕}. All known planets in this mass regime have lower densities requiring significant fractions of volatiles or H/He gas. We also constrain the mass and period of the outer companion in the Kepler-93 system from the long-term radial velocity trend and archival adaptive optics images. As the sample of dense planets with well-constrained masses and radii continues to grow, we will be able to test whether the fixed compositional model found for the seven dense planets considered in this paper extends to the full population of 1-6 M {sub ⊕} planets.

79 ASTRONOMY AND ASTROPHYSICS↗

DISSECTING THE POWER SOURCES OF LOW-LUMINOSITY EMISSION-LINE GALAXY NUCLEI VIA COMPARISON OF HST-STIS AND GROUND-BASED SPECTRA

Using a sample of ∼100 nearby line-emitting galaxy nuclei, we have built the currently definitive atlas of spectroscopic measurements of Hα and neighboring emission lines at subarcsecond scales. We employ these data in a quantitative comparison of the nebular emission in Hubble Space Telescope (HST) and ground-based apertures, which offer an order-of-magnitude difference in contrast, and provide new statistical constraints on the degree to which transition objects and low-ionization nuclear emission-line regions (LINERs) are powered by an accreting black hole at ≲10 pc. We show that while the small-aperture observations clearly resolve the nebular emission, the aperture dependence in the line ratios is generally weak, and this can be explained by gradients in the density of the line-emitting gas: the higher densities in the more nuclear regions potentially flatten the excitation gradients, suppressing the forbidden emission. The transition objects show a threefold increase in the incidence of broad Hα emission in the high-resolution data, as well as the strongest density gradients, supporting the composite model for these systems as accreting sources surrounded by star-forming activity. The narrow-line LINERs appear to be the weaker counterparts of the Type 1 LINERs, where the low accretion rates cause the disappearance of the broad-line component. The enhanced sensitivity of the HST observations reveals a 30% increase in the incidence of accretion-powered systems at z ≈ 0. A comparison of the strength of the broad-line emission detected at different epochs implies potential broad-line variability on a decade-long timescale, with at least a factor of three in amplitude.

79 ASTRONOMY AND ASTROPHYSICS↗

Search for photons above 10 19 eV with the surface detector of the Pierre Auger Observatory

We use the surface detector of the Pierre Auger Observatory to search for air showers initiated by photons with an energy above 10 19 eV. Photons in the zenith angle range from 30° to 60° can be identified in the overwhelming background of showers initiated by charged cosmic rays through the broader time structure of the signals induced in the water-Cherenkov detectors of the array and the steeper lateral distribution of shower particles reaching ground. Applying the search method to data collected between January 2004 and June 2020, upper limits at 95% CL are set to an E -2 diffuse flux of ultra-high energy photons above 10 19 eV, 2 × 10 19 eV and 4 × 10 19 eV amounting to 2.11 × 10 -3 , 3.12 × 10 -4 and 1.72 × 10 -4 km -2 sr -1 yr -1 , respectively. While the sensitivity of the present search around 2 × 10 19 eV approaches expectations of cosmogenic photon fluxes in the case of a pure-proton composition, it is one order of magnitude above those from more realistic mixed-composition models. The inferred limits have also implications for the search of super-heavy dark matter that are discussed and illustrated.

ultra high energy photons and neutrinos↗

Discovery of TOI-1260d and the characterization of the multiplanet system

ABSTRACT We report the discovery of a third planet transiting the star TOI-1260, previously known to host two transiting sub-Neptune planets with orbital periods of 3.127 and 7.493 d, respectively. The nature of the third transiting planet with a 16.6-d orbit is supported by ground-based follow-up observations, including time-series photometry, high-angular resolution images, spectroscopy, and archival imagery. Precise photometric monitoring with CHEOPS allows to improve the constraints on the parameters of the system, improving our knowledge on their composition. The improved radii of TOI-1260b and TOI-1260c are $2.36 \pm 0.06 \rm R_{\oplus }$, $2.82 \pm 0.08 \rm R_{\oplus }$, respectively while the newly discovered third planet has a radius of $3.09 \pm 0.09 \rm R_{\oplus }$. The radius uncertainties are in the range of 3 per cent, allowing a precise interpretation of the interior structure of the three planets. Our planet interior composition model suggests that all three planets in the TOI-1260 system contains some fraction of gas. The innermost planet TOI-1260b has most likely lost all of its primordial hydrogen-dominated envelope. Planets c and d were also likely to have experienced significant loss of atmospheric through escape, but to a lesser extent compared to planet b.

Lam, K. W. F. (ORCID:0000000299106088)↗

Decagonal Sn clathrate on d-Al-Ni-Co

Decagonal quasiperiodic ordering of Sn thin films on d-Al-Ni-Co is shown based on scanning tunneling microscopy (STM), low-energy electron diffraction, and density functional theory (DFT). Interestingly, the decagonal structural correlations are partially retained even up to a large film thickness of 10 nm grown at 165±10K. The nucleation centers called “Sn white flowers” identified by STM at submonolayer thickness are recognized as valid patches of the decagonal clathrate structure with low adsorption energies of these motifs. Due to the excellent lattice matching (to within 1%) between columns of Sn dodecahedra in the clathrate structure and pentagonal motifs at the d-Al-Ni-Co surface, the interfacial energy favors clathrate over the competing Sn crystalline forms. DFT study of the Sn/Al-Ni-Co composite model shows good mechanical stability, as shown by the work of separation of Sn from Al-Ni-Co slab that is comparable to the clathrate self-separation energy. Finally, the relaxed surface terminations of the R 2 T 4 clathrate approximant are in self-similarity correspondence with the motifs observed in the STM images from monolayer to the thickest Sn film.

75 CONDENSED MATTER PHYSICS, SUPERCONDUCTIVITY AND↗

Correlations between jet-quenching observables at energies available at the BNL Relativistic Heavy Ion Collider

Focusing on four types of correlation plots, R{sub AA} versus v{sub 2}, R{sub AA} versus I{sub AA}, I{sub AA} versus v{sub 2}{sup I{sub AA}}, and v{sub 2} versus v{sub 2}{sup I{sub AA}}, we demonstrate how the centrality dependence of correlations between multiple jet quenching observables provide valuable insight into the energy loss mechanism in a quark-gluon plasma. In particular, we find that a qualitative energy loss model gives a good description of R{sub AA} versus v{sub 2} only when we take {Delta}E-I{sup 3} and a medium geometry generated by a model of the color glass condensate. This same {Delta}E-I{sup 3} model also qualitatively describes the trigger p{sub T} dependence of R{sub AA} versus I{sub AA} data and makes novel predictions for the centrality dependence for this R{sub AA} versus I{sub AA} correlation. Current data suggest, albeit with extremely large uncertainty, that v{sub 2}{sup I{sub AA}} >> v{sub 2}, a correlation that is difficult to reproduce in current energy loss models.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Dense stellar matter with strange quark matter driven by kaon condensation

The core of neutron-star matter is supposed to be at a much higher density than the normal nuclear-matter density, for which various possibilities have been suggested, such as, for example, meson or hyperon condensation and/or deconfined quark or color-superconducting matter. In this work, we explore the implication on hadron physics of a dense compact object that has three ''phases'': nuclear matter at the outer layer, kaon condensed nuclear matter in the middle, and strange quark matter at the core. Using a drastically simplified but not unreasonable model, we develop the scenario where the different phases are smoothly connected with the kaon condensed matter playing a role of a ''doorway'' to a quark core, the equation of state of which with parameters restricted within the range allowed by nature could be made compatible with the mass vs radius constraint given by the 1.97-solar-mass object PSR J1614-2230 recently observed.

73 NUCLEAR PHYSICS AND RADIATION PHYSICS↗

Index theorem and Majorana zero modes along a non-Abelian vortex in a color superconductor

Color superconductivity in high-density QCD exhibits the color-flavor-locked phase. To explore zero modes in the color-flavor-locked phase in the presence of a non-Abelian vortex with an SU(2) symmetry in the vortex core, we apply the index theorem to the Bogoliubov-de Gennes (BdG) Hamiltonian. From the calculation of the topological index, we find that triplet, doublet and singlet sectors of SU(2) have certain number of chiral Majorana zero modes in the limit of vanishing chemical potential. We also solve the BdG equation by the use of the series expansion to show that the number of zero modes and their chirality match the result of the index theorem. From particle-hole symmetry of the BdG Hamiltonian, we conclude that if and only if the index of a given sector is odd, one zero mode survives generically for a finite chemical potential. We argue that this result should hold nonperturbatively even in the high-density limit.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Critical spectrum of fluctuations for deconfinement at protoneutron star cores

We study the deconfinement of hadronic matter into quark matter in a protoneutron star focusing on the effects of the finite size on the formation of just deconfined color superconducting quark droplets embedded in the hadronic environment. The hadronic phase is modeled by the nonlinear Walecka model at finite temperature including the baryon octet and neutrino trapping. For quark matter we use an SU(3){sub f} Nambu-Jona-Lasinio model including color superconductivity. The finite size effects on the just deconfined droplets are considered in the frame of the multiple reflection expansion. In addition, we consider that just deconfined quark matter is transitorily out of equilibrium respect to weak interaction, and we impose color neutrality and flavor conservation during the transition. We calculate self-consistently the surface tension and curvature energy density of the quark hadron interphase and find that it is larger than the values typically assumed in the literature. The transition density is calculated for drops of different sizes, and at different temperatures and neutrino trapping conditions. Then, we show that energy density fluctuations are much more relevant for deconfinement than temperature and neutrino density fluctuations. We calculate the critical size spectrum of energy density fluctuations that allows deconfinement as well as the nucleation rate of each critical bubble. We find that drops with any radii smaller than 800 fm can be formed at a huge rate when matter achieves the bulk transition limit of 5-6 times the nuclear saturation density.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Virtuous trees at five- and six-point levels for Yang-Mills theory and gravity

We present a particularly nice D-dimensional graph-based representation of the full color-dressed five-point tree-level gluon amplitude. It possesses the following virtues: (1) it satisfies the color-kinematic correspondence, and thus trivially generates the associated five-point graviton amplitude, (2) all external-state information is encoded in color-ordered partial amplitudes, and (3) one function determines the kinematic contribution of all graphs in the Yang-Mills amplitude, so the associated gravity amplitude is manifestly permutation symmetric. The third virtue, while shared among all known loop-level correspondence-satisfying representations, is novel for tree-level representations sharing the first two virtues. This new D-dimensional representation makes contact with the recently found multiloop five-point representations, suggesting all-loop, all-multiplicity ramifications through unitarity. Additionally we present a slightly less virtuous representation of the six-point maximally helicity-violating (MHV) and MHV amplitudes that holds only in four dimensions.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Early LHC phenomenology of Yukawa-bound heavy QQ mesons

Current limits from the LHC on fourth generation quarks are already at the unitarity bound of 500 GeV or so. If they exist, the strong Yukawa couplings are turning nonperturbative, and may form bound states. We study the domain of m{sub b'} and m{sub t'} in the range of 500 to 700 GeV, where we expect binding energies are mainly of Yukawa origin, with QCD subdominant. To be consistent with electroweak precision tests, the t' and b' quarks have to be nearly degenerate, exhibiting a new 'isospin'. Comparing relativistic expansion with a relativistic bound state approach, we find the most interesting is the production of a color octet, isosinglet vector meson (a 'gluon-prime') via qq-bar{yields}{omega}{sub 8}. Leading decay modes are {pi}{sub 8}{sup {+-}}W{sup {+-}}, {pi}{sub 8}{sup 0}Z{sup 0}, and constituent quark decay, with qq and tt-bar' and bb' subdominant. The color octet, isovector pseudoscalar {pi}{sub 8} meson decays via constituent quark decay, or to Wg. These decay rates are parameterized by the decay constant, the binding energy and mass differences, and V{sub tb'}. For small V{sub t'b}, one could have a spectacular signal of WWg, where a soft W accompanies a very massive Wg pair. In general, however, one has high multiplicity signals with b, W, and t jet substructures that are not so different from the t't-bar' and b'b-bar' search.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

New color-octet axial vector boson revisited

In this paper we reexamine how to utilize the previous proposed color-octet axial-vector boson Z{sub C} to explain the 3.4{sigma} anomaly of tt forward-backward (FB) asymmetry A{sub FB} for m{sub tt}>450 GeV observed by CDF. Our numerical results indicate that the best-fit parameters are g{sub A}{sup q}=0.07, g{sub A}{sup Q}=3, and M{sub C}=440 GeV, which are obtained by fitting the mass dependent A{sub FB} and total cross section data provided by a recent CDF measurement. Here g{sub A}{sup q}(g{sub A}{sup Q}) and M{sub C} are the axial couplings among Z{sub C} with the first two (the third) generation quarks, and Z{sub C} mass, respectively. We also calculate one-side forward-backward asymmetry A{sub OFB} for top and bottom quark pair production at the LHC, focusing on the new contributions from Z{sub C}. Our studies show that A{sub OFB} can be utilized to measure the properties of new particle Z{sub C}.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Bulk viscosity of anisotropically expanding hot QCD plasma

The bulk viscosity, {zeta} and its ratio with the shear viscosity, {zeta}/{eta} have been studied in an anisotropically expanding pure glue plasma in the presence of turbulent color fields. It has been shown that the anisotropy in the momentum distribution function of gluons, which has been determined from a linearized transport equation eventually leads to the bulk viscosity. For the isotropic (equilibrium) state, a recently proposed quasiparticle model of pure SU(3) lattice QCD equation of state has been employed where the interactions are encoded in the effective fugacity. It has been argued that the interactions present in the equation of state, significantly contribute to the bulk viscosity. Its ratio with the shear viscosity is significant even at 1.5T{sub c}. Thus, one needs to take in account the effects of the bulk viscosity while studying the hydrodynamic expansion of quark-gluon plasma in the Relativistic Heavy Ion Collider and the Large Hadron Collider.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Chirally symmetric and confining dense matter with a diffused quark Fermi surface

It is possible that at low temperatures and large density there exists a confining matter with restored chiral symmetry, just after the dense nuclear matter with broken chiral symmetry. Such a phase has, so far, been studied within a confining and chirally symmetric model, assuming a rigid quark Fermi surface. In the confining quarkyonic matter, however, near the Fermi surface, quarks group into color-singlet baryons. Interaction between quarks leads to a diffusion of the quark Fermi surface. Here, we study effects of such diffusion and verify that it does not destroy a possible existence of a confining but chirally symmetric matter at low temperatures.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Diphotons from electroweak triplet-singlet mixing

The neutral component of a real pseudoscalar electroweak (EW) triplet can produce a diphoton excess at 750 GeV, if it is somewhat mixed with an EW singlet pseudoscalar. This triplet-singlet mixing allows for greater freedom in the diboson branching ratios than the singlet-only case, but it is still possible to probe the parameter space extensively with 300 fb -1 . The charged component of the triplet is pair produced at the LHC, which results in a striking signal in the form of a pair of Wγ resonances with an irreducible rate of 0.27 fb. Other signatures include multiboson final states from cascade decays of the triplet-singlet neutral states. In conclusion, a large class of composite models feature both EW singlet and triplet pseudo-Nambu-Goldstone bosons in their spectrum, with the diboson couplings generated by axial anomalies.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗