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At least 577 records · Page 32

Scalable parallel communications

Coarse-grain parallelism in networking (that is, the use of multiple protocol processors running replicated software sending over several physical channels) can be used to provide gigabit communications for a single application. Since parallel network performance is highly dependent on real issues such as hardware properties (e.g., memory speeds and cache hit rates), operating system overhead (e.g., interrupt handling), and protocol performance (e.g., effect of timeouts), we have performed detailed simulations studies of both a bus-based multiprocessor workstation node (based on the Sun Galaxy MP multiprocessor) and a distributed-memory parallel computer node (based on the Touchstone DELTA) to evaluate the behavior of coarse-grain parallelism. Our results indicate: (1) coarse-grain parallelism can deliver multiple 100 Mbps with currently available hardware platforms and existing networking protocols (such as Transmission Control Protocol/Internet Protocol (TCP/IP) and parallel Fiber Distributed Data Interface (FDDI) rings); (2) scale-up is near linear in n, the number of protocol processors, and channels (for small n and up to a few hundred Mbps); and (3) since these results are based on existing hardware without specialized devices (except perhaps for some simple modifications of the FDDI boards), this is a low cost solution to providing multiple 100 Mbps on current machines. In addition, from both the performance analysis and the properties of these architectures, we conclude: (1) multiple processors providing identical services and the use of space division multiplexing for the physical channels can provide better reliability than monolithic approaches (it also provides graceful degradation and low-cost load balancing); (2) coarse-grain parallelism supports running several transport protocols in parallel to provide different types of service (for example, one TCP handles small messages for many users, other TCP's running in parallel provide high bandwidth service to a single application); and (3) coarse grain parallelism will be able to incorporate many future improvements from related work (e.g., reduced data movement, fast TCP, fine-grain parallelism) also with near linear speed-ups.

Maly, K.↗

Axom

The Axom library consists of n collection of software components that provide core computer science infrastructure capabilities that can be shared by diverse high performance computing (HPC) applications. The current set of capabilities that Axom provides includes: Customizable support for error/warning and diagnostic message reporting and coordination among components of integrated applications (e.g., physics packages, libraries, etc.); Scalable parallel aggregation and filtering of message logging; In memory datastore for hierarchical, mesh-aware simulation data. The datastore supports data description, allocation, deallocation. parallel l/0, etc; Mesh data model abstractions that enable the development of mesh-based computational algorithms that work with many diverse, application· specific mesh types; and Computational geometry primitives for developing high performance parallel algorithms based on spatial geometry and meshes, e.g., spatial acceleration data structures, sets, maps, relations, etc.

Hornung, RichardD.↗

Fiber optic data transmission

The Ohio University Avionics Engineering Center is currently developing a fiber optic data bus transmission and reception system that could eventually replace copper cable connections in airplanes. The original form of the system will transmit information from an encoder to a transponder via a fiber optic cable. An altimeter and an altitude display are connected to a fiber optic transmitter by copper cable. The transmitter converts the altimetry data from nine bit parallel to serial form and send these data through a fiber optic cable to a receiver. The receiver converts the data using a cable similar to that used between the altimeter and display. The transmitting and receiving ends also include a display readout. After completion and ground testing of the data bus, the system will be tested in an airborne environment.

Shreve, Steven T.↗

Reverse time migration: A seismic processing application on the connection machine

The implementation of a reverse time migration algorithm on the Connection Machine, a massively parallel computer is described. Essential architectural features of this machine as well as programming concepts are presented. The data structures and parallel operations for the implementation of the reverse time migration algorithm are described. The algorithm matches the Connection Machine architecture closely and executes almost at the peak performance of this machine.

Fiebrich, Rolf-Dieter↗

Graphics Processing Unit Assisted Thermographic Compositing

Objective: To develop a software application utilizing general purpose graphics processing units (GPUs) for the analysis of large sets of thermographic data. Background: Over the past few years, an increasing effort among scientists and engineers to utilize the GPU in a more general purpose fashion is allowing for supercomputer level results at individual workstations. As data sets grow, the methods to work them grow at an equal, and often great, pace. Certain common computations can take advantage of the massively parallel and optimized hardware constructs of the GPU to allow for throughput that was previously reserved for compute clusters. These common computations have high degrees of data parallelism, that is, they are the same computation applied to a large set of data where the result does not depend on other data elements. Signal (image) processing is one area were GPUs are being used to greatly increase the performance of certain algorithms and analysis techniques. Technical Methodology/Approach: Apply massively parallel algorithms and data structures to the specific analysis requirements presented when working with thermographic data sets.

Ragasa, Scott↗

Towards Feature-Preserving 2D and 3D Vector Field Compression

The objective of this work is to develop error-bounded lossy compression methods to preserve topological features in 2D and 3D vector fields. Specifically, we explore the preservation of critical points in piecewise linear vector fields. We define the preservation of critical points as, without any false positive, false negative, or false type change in the decompressed data, (1) keeping each critical point in its original cell and (2) retaining the type of each critical point (e.g., saddle and attracting node). The key to our method is to adapt a vertex-wise error bound for each grid point and to compress input data together with the error bound field using a modified lossy compressor. Our compression algorithm can be also embarrassingly parallelized for large data handling and in situ processing. We benchmark our method by comparing it with existing lossy compressors in terms of false positive/negative/type rates, compression ratio, and various vector field visualizations with several scientific applications.

critical points↗

Differential Draining of Parallel-Fed Propellant Tanks in Morpheus and Apollo Flight

Parallel-fed propellant tanks are an advantageous configuration for many spacecraft. Parallel-fed tanks allow the center of gravity (cg) to be maintained over the engine(s), as opposed to serial-fed propellant tanks which result in a cg shift as propellants are drained from tank one tank first opposite another. Parallel-fed tanks also allow for tank isolation if that is needed. Parallel tanks and feed systems have been used in several past vehicles including the Apollo Lunar Module. The design of the feedsystem connecting the parallel tank is critical to maintain balance in the propellant tanks. The design must account for and minimize the effect of manufacturing variations that could cause delta-p or mass flowrate differences, which would lead to propellant imbalance. Other sources of differential draining will be discussed. Fortunately, physics provides some self-correcting behaviors that tend to equalize any initial imbalance. The question concerning whether or not active control of propellant in each tank is required or can be avoided or not is also important to answer. In order to provide data on parallel-fed tanks and differential draining in flight for cryogenic propellants (as well as any other fluid), a vertical test bed (flying lander) for terrestrial use was employed. The Morpheus vertical test bed is a parallel-fed propellant tank system that uses passive design to keep the propellant tanks balanced. The system is operated in blow down. The Morpheus vehicle was instrumented with a capacitance level sensor in each propellant tank in order to measure the draining of propellants in over 34 tethered and 12 free flights. Morpheus did experience an approximately 20 lb/m imbalance in one pair of tanks. The cause of this imbalance will be discussed. This paper discusses the analysis, design, flight simulation vehicle dynamic modeling, and flight test of the Morpheus parallel-fed propellant. The Apollo LEM data is also examined in this summary report of the flight data.

Hurlbert, Eric↗

Modeling Data Movement Performance on Heterogeneous Architectures

The cost of data movement on parallel systems varies greatly with machine architecture, job partition, and nearby jobs. Performance models that accurately capture the cost of data movement provide a tool for analysis, allowing for communication bottlenecks to be pinpointed. Modern heterogeneous architectures yield increased variance in data movement as there are a number of viable paths for inter-GPU communication. In this paper, we present performance models for the various paths of inter-node communication on modern heterogeneous architectures, including the trade-off between GPUDirect communication and copying to CPUs. Furthermore, we present a novel optimization for inter-node communication based on these models, utilizing all available CPU cores per node. Finally, we show associated performance improvements for MPI collective operations.

97 MATHEMATICS AND COMPUTING↗

A New Capability of E4D For 3D Parallel Joint Inversion of DC Resistivity And Traveltime Data on Unstructured Mesh

A major challenge in interpreting geophysical data is how to derive consistent three-dimensional (3D) earth models of different physical properties from spatially and temporally limited measurements. Joint inversion with cross-gradient constraints is an approach to find such models by imposing structural similarities between different physical parameters. We have developed a parallel distributed-memory joint inversion code for direct-current (DC) resistivity and traveltime data using the cross-gradient constraint on unstructured mesh. The code utilizes existing E4D framework for parallel forward simulation, distributed storage and computation of the Jacobian matrix of forward operator, and parallel execution of matrix-vector multiplication during inversion. Besides, the joint inversion is solved by nonlinear conjugate gradient algorithm parallelized for DC resistivity and traveltime data. The joint inversion capability of E4D was tested using synthetic data from cross-borehole DC resistivity and traveltime data. The results indicate that the shape and size of the anomalies from the joint inversion are more reliable than those from separate inversions.

58 GEOSCIENCES↗

Earth observation data systems in the 1980's

The requirements for future data systems for earth resource observation data are examined. Estimates are made for both expected data volumes and data delivery requirements. Research and development activities presently underway are described, including (1) high-speed processors such as the massively parallel processor; (2) data storage systems, including optical disk configurations and (3) distributed data systems such as high-speed local networks and the applications data service system.

Bracken, P. A.↗

A case study on parallel HDF5 dataset concatenation for high energy physics data analysis

In High Energy Physics (HEP), experimentalists generate large volumes of data that, when analyzed, helps us better understand the fundamental particles and their interactions. This data is often captured in many files of small size, creating a data management challenge for scientists. In order to better facilitate data management, transfer, and analysis on large scale platforms, it is advantageous to aggregate data further into a smaller number of larger files. However, this translation process can consume significant time and resources, and if performed incorrectly the resulting aggregated files can be inefficient for highly parallel access during analysis on large scale platforms. In this paper, we present our case study on parallel I/O strategies and HDF5 features for reducing data aggregation time, making effective use of compression, and ensuring efficient access to the resulting data during analysis at scale. We focus on NOvA detector data in this case study, a large-scale HEP experiment generating many terabytes of data. Here, the lessons learned from our case study inform the handling of similar datasets, thus expanding community knowledge related to this common data management task.

72 PHYSICS OF ELEMENTARY PARTICLES AND FIELDS↗

Computer control of a far infrared interferometer

A simple interface has been designed for the automatic control and data collection from a Grubb Parsons Mark III cube interferometer. A computer is used to automatically step the movable mirror on the interferometer. Data may be directly input into the computer for immediate transformation or stored for later analysis via a fast Fourier transformation. The interface is based on a commercial analog-to-digital converter having a parallel-to-serial data converter. The device can also display ASCII characters sent from the computer in parallel binary code. The system is applicable to recording interferograms having long time durations and to measuring multiple interferograms for statistical averaging.

Breecher, J.↗

Prime agricultural land monitoring and assessment component of the California Integrated Remote Sensing System

The use of digital LANDSAT techniques for monitoring agricultural land use conversions was studied. Two study areas were investigated: one in Ventura County and the other in Fresno County (California). Ventura test site investigations included the use of three dates of LANDSAT data to improve classification performance beyond that previously obtained using single data techniques. The 9% improvement is considered highly significant. Also developed and demonstrated using Ventura County data is an automated cluster labeling procedure, considered a useful example of vertical data integration. Fresno County results for a single data LANDSAT classification paralleled those found in Ventura, demonstrating that the urban/rural fringe zone of most interest is a difficult environment to classify using LANDSAT data. A general raster to vector conversion program was developed to allow LANDSAT classification products to be transferred to an operational county level geographic information system in Fresno.

Estes, J. E.↗

Spaceflight optical disk recorder development

Mass memory systems based on rewriteable optical disk media are expected to play an important role in meeting the data system requirements for future NASA spaceflight missions. NASA has established a program to develop a high performance (high rate, large capacity) optical disk recorder focused on use aboard unmanned Earth orbiting platforms. An expandable, adaptable system concept is proposed based on disk drive modules and a modular controller. Drive performance goals are 10 gigabyte capacity, 300 megabit/s transfer rate, 10 exp -12 corrected bit error rate, and 150 millisec access time. This performance is achieved by writing eight data tracks in parallel on both sides of a 14 in. optical disk using two independent heads. System goals are 160 gigabyte capacity, 1.2 gigabits/s data rate with concurrent I/O, 250 millisec access time, and two to five year operating life on orbit. The system can be configured to meet various applications. This versatility is provided by the controller. The controller provides command processing, multiple drive synchronization, data buffering, basic file management, error processing, and status reporting. Technology developments, design concepts, current status including a computer model of the system and a Controller breadboard, and future plans for the Drive and Controller are presented.

Jurczyk, Stephen G.↗

Parallel Nonnegative CP Decomposition of Dense Tensors

The CP tensor decomposition is a low-rank approximation of a tensor. We present a distributed-memory parallel algorithm and implementation of an alternating optimization method for computing a CP decomposition of dense tensors that can enforce nonnegativity of the computed low-rank factors. The principal task is to parallelize the Matricized-Tensor Times Khatri-Rao Product (MTTKRP) bottleneck subcomputation. The algorithm is computation efficient, using dimension trees to avoid redundant computation across MTTKRPs within the alternating method. Our approach is also communication efficient, using a data distribution and parallel algorithm across a multidimensional processor grid that can be tuned to minimize communication. We benchmark our software on synthetic as well as hyperspectral image and neuroscience dynamic functional connectivity data, demonstrating that our algorithm scales well to 100s of nodes (up to 4096 cores) and is faster and more general than the currently available parallel software.

Ballard, Grey↗

Fuzzy Modeling and Parallel Distributed Compensation for Aircraft Flight Control from Simulated Flight Data

A method is described that combines fuzzy system identification techniques with Parallel Distributed Compensation (PDC) to develop nonlinear control methods for aircraft using minimal a priori knowledge, as part of NASA’s Learn-to-Fly initiative. A fuzzy model was generated with simulated flight data, and consisted of a weighted average of multiple linear time invariant state-space cells having parameters estimated using the equation-error approach and a least-squares estimator. A compensator was designed for each subsystem using Linear Matrix Inequalities (LMI) to guarantee closed-loop stability and performance requirements. This approach is demonstrated using simulated flight data to automatically develop a fuzzy model and design control laws for a simplified longitudinal approximation of the F-16 nonlinear flight dynamics simulation. Results include a comparison of flight data with the estimated fuzzy models and simulations that illustrate the feasibility and utility of the combined fuzzy modeling and control approach.

Weinstein, Rose↗