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DOE OSTI2022

A Southern Photometric Quasar Catalog from the Dark Energy Survey Data Release 2

We present a catalog of 1.4 million photometrically selected quasar candidates in the southern hemisphere over the ~5000 deg 2 Dark Energy Survey (DES) wide survey area. We combine optical photometry from the DES second data release (DR2) with available near-infrared (NIR) and the all-sky unWISE mid-infrared photometry in the selection. We build models of quasars, galaxies, and stars with multivariate skew-t distributions in the multidimensional space of relative fluxes as functions of redshift (or color for stars) and magnitude. Our selection algorithm assigns probabilities for quasars, galaxies, and stars and simultaneously calculates photometric redshifts (photo-z) for quasar and galaxy candidates. Benchmarking on spectroscopically confirmed objects, we successfully classify (with photometry) 94.7% of quasars, 99.3% of galaxies, and 96.3% of stars when all IR bands (NIR YJHK and WISE W1W2) are available. The classification and photo-z regression success rates decrease when fewer bands are available. Our quasar (galaxy) photo-z quality, defined as the fraction of objects with the difference between the photo-z z p and the spectroscopic redshift z s , |Δz| ≡ |z s - z p |/(1 + z s ) ≤ 0.1, is 92.2% (98.1%) when all IR bands are available, decreasing to 72.2% (90.0%) using optical DES data only. Our photometric quasar catalog achieves an estimated completeness of 89% and purity of 79% at r < 21.5 (0.68 million quasar candidates), with reduced completeness and purity at 21.5 < r ≲ 24. Among the 1.4 million quasar candidates, 87,857 have existing spectra, and 84,978 (96.7%) of them are spectroscopically confirmed quasars. Finally, we provide quasar, galaxy, and star probabilities for all (0.69 billion) photometric sources in the DES DR2 coadded photometric catalog.

79 ASTRONOMY AND ASTROPHYSICS↗

NASA NTRS2021

Mapping Boreal Forest Spruce Beetle Health Status at the Individual Crown Scale Using Fused Spectral and Structural Data

The frequency and severity of spruce bark beetle outbreaks are increasing in boreal forests leading to widespread tree mortality and fuel conditions promoting extreme wildfire. Detection of beetle infestation is a forest health monitoring (FHM) priority but is hampered by the challenges of detecting early stage (“green”) attack from the air. There is indication that green stage might be detected from vertical gradients of spectral data or from shortwave infrared information distributed within a single crown. To evaluate the efficacy of discriminating “non-infested”, “green”, and “dead” health statuses at the landscape scale in Alaska, USA, this study conducted spectral and structural fusion of data from: (1) Unoccupied aerial vehicle (UAV) multispectral (6 cm) + structure from motion point clouds (~700 pts per sq. m); and (2) Goddard Lidar Hyperspectral Thermal (G-LiHT) hyperspectral (400 to 1000 nm, 0.5 m) + SWIR-band lidar (~32 pts per sq.m). We achieved 78% accuracy for all three health statuses using spectral + structural fusion from either UAV or G-LiHT and 97% accuracy for non-infested/dead using G-LiHT. We confirm that UAV 3D spectral (e.g., greenness above versus below median height in crown) and lidar apparent reflectance metrics (e.g., mean reflectance at 99th percentile height in crown), are of high value, perhaps capturing the vertical gradient of needle degradation. In most classification exercises, UAV accuracy was lower than G-LiHT indicating that collecting ultra-high spatial resolution data might be less important than high spectral resolution information. While the value of passive optical spectral information was largely confined to the discrimination of non-infested versus dead crowns, G-LiHT hyperspectral band selection (~400, 675, 755, and 940 nm) could inform future FHM mission planning regarding optimal wavelengths for this task. Interestingly, the selected regions mostly did not align with the band designations for our UAV multispectral data but do correspond to, e.g., Sentinel-2 red edge bands, suggesting a path forward for moderate scale bark beetle detection when paired with suitable structural data.

Janice Cessna↗

DOE OSTI2023

cTULIP: application of a human-based RNA-seq primary tumor classification tool for cross-species primary tumor classification in canine

The domestic dog, Canis familiaris, is quickly gaining traction as an advantageous model for use in the study of cancer, one of the leading causes of death worldwide. Naturally occurring canine cancers share clinical, histological, and molecular characteristics with the corresponding human diseases. In this study, we take a deep-learning approach to test how similar the gene expression profile of canine glioma and bladder cancer (BLCA) tumors are to the corresponding human tumors. We likewise develop a tool for identifying misclassified or outlier samples in large canine oncological datasets, analogous to that which was developed for human datasets. We test a number of machine learning algorithms and found that a convolutional neural network outperformed logistic regression and random forest approaches. We use a recently developed RNA-seq-based convolutional neural network, TULIP, to test the robustness of a human-data-trained primary tumor classification tool on cross-species primary tumor prediction. Our study ultimately highlights the molecular similarities between canine and human BLCA and glioma tumors, showing that protein-coding one-to-one homologs shared between humans and canines, are sufficient to distinguish between BLCA and gliomas. The results of this study indicate that using protein-coding one-to-one homologs as the features in the input layer of TULIP performs good primary tumor prediction in both humans and canines. Furthermore, our analysis shows that our selected features also contain the majority of features with known clinical relevance in BLCA and gliomas. Our success in using a human-data-trained model for cross-species primary tumor prediction also sheds light on the conservation of oncological pathways in humans and canines, further underscoring the importance of the canine model system in the study of human disease.

60 APPLIED LIFE SCIENCES↗

DOE OSTI2020

CA-ResidueRetentionAssumptionsBT16-BaseCase

As part of the Billion Ton resource assessment projections created in 2016 (see https://www.energy.gov/sites/prod/files/2016/12/f34/2016_billion_ton_report_12.2.16_0.pdf, DOI: 10.2172/1435342) -henceforth "BT16", this dataset was used as an assumption to limit the availability of residues under a "base-case" scenario (BC1). Crop residues that had this assumption applied include corn stover, cereal (wheat, oats, and barley) straws, and sorghum stubble. What is the purpose of the data set? Why were the data collected? Per request for use in subsequent research, we have summarized assumptions for California only and selected years (2020, 2030, 2040) that were used in the BT16's base-case projections for agricultural residues and have provided details by tillage class that limited residue availability for harvest (dry tons of residues that must remain). Note: '10' is a high number that assures that no residue harvested could occur. Note: Tillage classification assumptions are also of importance: a low flexibility was applied, allowing a moderate deviation from a baseline situation (using historic CTIC data on tillage type used in counties for each crop). A moderate flexibility, allows farmers to put land into another tillage type (no till, conservation till, and reduced till) where a higher net present value was calculated. This dataset includes all allowable tillage types by crop, but each tillage type may not have occurred in BT16 simulations.

Davis, Maggie↗

DOE OSTI2022

Sequential Decision Making (SDM) for Mesh Refinement and Model Selection in Multiscale, Multi-Physics Applications

Intelligent automation and decision support are needed to enhance computational efficiency and robustness in multiscale and multi-physics problems, including materials science, manufacturing, and climate and weather modeling. Current scientific computing approaches for enabling decisions by scientists fail to explore the role of learning, reasoning, and probabilistic planning. Often these decisions are not performed in real-time during the computation but are made prior to the start of the computation, which must be interrupted in order to make changes to the prior choices. Such interruptions at different stages of the computation increase the total computing time and the need for a human expert to frequently monitor the results. State of art scientific computing methods consist of rule-based algorithms that cannot automatically adapt to a dynamically changing computing environment. The development of a Sequential Decision Making (SDM) framework will automate scientific computing by optimizing the policies for mesh refinement, time-stepping, model and algorithm selection, resource allocation, and pre and post-processing. Our agent SDM framework for scientific computing will consist of data-driven learning (Classifier), automated reasoning (contextual knowledge), and probabilistic planning (Reinforcement Learning). In this project, we focused on three problems to demonstrate our SDM framework on a set of ordinary and partial differential equations. Classification of Lorenz system regions using Feed-Forward Neural Networks examined learning in the SDM framework. On the other hand, reasoning and planning in the SDM framework were used in two problems: adaptive time-stepping for nonlinear ODEs using on-policy RL algorithms, and adaptive mesh refinement for 2-D PDEs using off-policy RL algorithms.

97 MATHEMATICS AND COMPUTING↗

NASA NTRS1979

Adaptive remote sensing technology for feature recognition and tracking

A technology development plan designed to reduce the data load and data-management problems associated with global study and monitoring missions is described with a heavy emphasis placed on developing mission capabilities to eliminate the collection of unnecessary data. Improved data selectivity can be achieved through sensor automation correlated with the real-time needs of data users. The first phase of the plan includes the Feature Identification and Location Experiment (FILE) which is scheduled for the 1980 Shuttle flight. The FILE experiment is described with attention given to technology needs, development plan, feature recognition and classification, and cloud-snow detection/discrimination. Pointing, tracking and navigation received particular consideration, and it is concluded that this technology plan is viewed as an alternative to approaches to real-time acquisition that are based on extensive onboard format and inventory processing and reliance upon global-satellite-system navigation data.

Wilson, R. G.↗

NASA NTRS1982

The use of Landsat-3 thermal data to help differentiate land covers

Landsat-3 Multispectral Scanner Subsystem (MSS) digital data of the Baltimore, Maryland area gathered on May 24, 1978, are examined to show the usefulness of thermal data in providing better discrimination between agricultural and residential areas, certain types of urban/industrial areas and water, cloud shadows and water, and bare-extractive areas and bright urban cover types. High altitude aircraft imagery taken on May 3, 1978, provides ground truth and training site verification. Two classifications are made for each training site: the initial one using bands 4, 5, and 7 and a second in which the thermal data are included with the visible and near infrared data. This permits a direct comparison of areas spectrally similar with and without the inclusion of the thermal data. Commission errors determined from selected subsets of the data show reductions of 95% for the urban/industrial versus water themes, 84% for the residential versus agriculture themes, 64.0% for the bare-extractive versus bright urban themes, and 24% for the cloud shadow versus water themes when the thermal data are included in the signature.

Ormsby, J. P.↗

NASA NTRS1984

Evaluation of entropy and JM-distance criterions as features selection methods using spectral and spatial features derived from LANDSAT images

A study area near Ribeirao Preto in Sao Paulo state was selected, with predominance in sugar cane. Eight features were extracted from the 4 original bands of LANDSAT image, using low-pass and high-pass filtering to obtain spatial features. There were 5 training sites in order to acquire the necessary parameters. Two groups of four channels were selected from 12 channels using JM-distance and entropy criterions. The number of selected channels was defined by physical restrictions of the image analyzer and computacional costs. The evaluation was performed by extracting the confusion matrix for training and tests areas, with a maximum likelihood classifier, and by defining performance indexes based on those matrixes for each group of channels. Results show that in spatial features and supervised classification, the entropy criterion is better in the sense that allows a more accurate and generalized definition of class signature. On the other hand, JM-distance criterion strongly reduces the misclassification within training areas.

Parada, N. D. J.↗

NASA NTRS2020

Event Selection and Background Rejection in Time Projection Chambers Using Convolutional Neural Networks and a Specific Application to the AdEPT Gamma-ray Polarimeter Mission

The Advanced Energetic Pair Telescope gamma-ray polarimeter uses a time projection chamber for measuring pair production events and is expected to generate a raw instrument data rate four orders of magnitude greater than is transmittable with typical satellite data communications. GammaNet, a convolutional neural network, proposes to solve this problem by performing event classification on-board for pair production and background events, reducing the data rate to a level that can be accommodated by typical satellite communication systems. In order to train GammaNet, a set of 1.1 × 10(exp 6) pair production events and 10(exp 6) background events were simulated for the Advanced Energetic Pair Telescope using the Geant4 Monte Carlo code. An additional set of 10(exp 6) pair production and 10 background events were simulated to test GammaNet’s capability for background discrimination. With optimization, GammaNet has achieved the proposed background rejection requirements for Galactic Cosmic Ray proton events. Given the best case assumption for downlink speeds, signal sensitivity for pair production ranged between 1.1 ± 0.5% to 69 ± 2% for 5 and 250 MeV incident gamma rays. This range became 0.1 ± 0.1% to 17 ± 2% for the worst case scenario of downlink speeds. The application of a feature visualization algorithm to GammaNet demonstrated decreased response to electronic noise and events exiting or entering the frame and increased response to parallel tracks that are close in proximity. GammaNet has been successfully implemented and shows promising results.

Richard L. Garnett↗

DOE OSTI2025

Emergence of deep eutectic solvents (DES): chemistry, preparation, properties, and applications in biorefineries and critical materials

The emergence of renewable deep eutectic solvents (DES) as clean and efficient catalysts and solvents has created new opportunities for lignocellulosic biorefineries and critical material sectors, including chemical, energy, pharmaceutical, textile, and hydrometallurgical industries. This review provides an in-depth overview of DES, covering their chemistry, classifications, preparation methods, processing characteristics, and recyclability, while highlighting their unique attributes and industry relevant applications. Emphasis is placed on the integration of DES into advanced biorefinery systems, focusing on their tunable physicochemical and thermodynamic properties for biomass pretreatment and the production of value-added products. The review explores how DES can be tuned for selective dissolution of biomass components and evaluates production and valorization of DES-derived biochemicals, with attention to lignin extraction mechanisms and conversion of biomass into bioproducts and biofuels. Beyond biorefineries, the scope extends to DES applications in electrochemical energy devices, where they serve as electrolytes, synthesis media for electrode materials, and leaching agents in battery recycling. The multifunctional roles of DES in pharmaceutical, hydrometallurgical, and textile sectors are also explored for contributions to sustainable processing. Finally, the review identifies future research directions, outlining benefits, challenges, and knowledge gaps, for continued industrial development.

09 BIOMASS FUELS↗

NASA NTRS1975

Operational considerations for the application of remotely sensed forest data from LANDSAT or other airborne platforms

Research in the application of remotely sensed data from LANDSAT or other airborne platforms to the efficient management of a large timber based forest industry was divided into three phases: (1) establishment of a photo/ground sample correlation, (2) investigation of techniques for multi-spectral digital analysis, and (3) development of a semi-automated multi-level sampling system. To properly verify results, three distinct test areas were selected: (1) Jacksonville Mill Region, Lower Coastal Plain, Flatwoods, (2) Pensacola Mill Region, Middle Coastal Plain, and (3) Mississippi Mill Region, Middle Coastal Plain. The following conclusions were reached: (1) the probability of establishing an information base suitable for management requirements through a photo/ground double sampling procedure, alleviating the ground sampling effort, is encouraging, (2) known classification techniques must be investigated to ascertain the level of precision possible in separating the many densities involved, and (3) the multi-level approach must be related to an information system that is executable and feasible.

Baker, G. R.↗

NASA NTRS1981

Mapping sand and gravel pits in the Patuxent River watershed

LANDSAT data from July 1973 and June 1978 for the Patuxent River Watershed of Maryland were processed in an effort to devise an economical method of monitoring the reclamation of sand and gravel pits. ASTEP-II and IDIMS software were utilized to derive signatures for sand and gravel pits and other land use/land cover types. Both unsupervised and supervised classifications of the two data sets were produced. Resultant statistics and color output products were compared in order to determine the extent of reclamation and expansion of sand and gravel pits over the five-year time span and to check the locations of more recent sand and gravel pits. Preliminary results indicate that, for a selected northern sub-acre, signatures derived for sand and gravel pits were nearly 90 percent accurate.

Schmidt, T. J.↗

DOE OSTI2021

Experiment Simulation Configurations Approximating DUNE TDR

The Deep Underground Neutrino Experiment (DUNE) is a next-generation long-baseline neutrino oscillation experiment consisting of a high-power, broadband neutrino beam, a highly capable near detector located on site at Fermilab, in Batavia, Illinois, and a massive liquid argon time projection chamber (LArTPC) far detector located at the 4850L of Sanford Underground Research Facility in Lead, South Dakota. The long-baseline physics sensitivity calculations presented in the DUNE Physics TDR, and in a related physics paper, rely upon simulation of the neutrino beam line, simulation of neutrino interactions in the near and far detectors, fully automated event reconstruction and neutrino classification, and detailed implementation of systematic uncertainties. The purpose of this posting is to provide a simplified summary of the simulations that went into this analysis to the community, in order to facilitate phenomenological studies of long-baseline oscillation at DUNE. Simulated neutrino flux files and a GLoBES configuration describing the far detector reconstruction and selection performance are included as ancillary files to this posting. A simple analysis using these configurations in GLoBES produces sensitivity that is similar, but not identical, to the official DUNE sensitivity. DUNE welcomes those interested in performing phenomenological work as members of the collaboration, but also recognizes the benefit of making these configurations readily available to the wider community.

Abi, B↗

NASA NTRS1981

Application of scanning microdensitometer data in selected plant science case studies

This paper treats a representative sample of projects aimed at vegetation mapping and assessment via analysis of both digital photographic and Landsat data projects and illustrates the potential for using scanning microdensitometric data extracted from color infrared photographs in the following applications: freshwater wetlands mapping, tree type mapping, and yield vs. reflectance modeling in corn fertilization experiments. These case studies are presented to illustrate the general applicability of scanning microdensitometer data in the contexts of image classification and enhancement as well as quantitative modeling of ground parameters.

Lillesand, T. M.↗

DOE OSTI2023

A catalogue of cataclysmic variables from 20 yr of the Sloan Digital Sky Survey with new classifications, periods, trends, and oddities

ABSTRACT We present a catalogue of 507 cataclysmic variables (CVs) observed in SDSS I to IV including 70 new classifications collated from multiple archival data sets. This represents the largest sample of CVs with high-quality and homogeneous optical spectroscopy. We have used this sample to derive unbiased space densities and period distributions for the major sub-types of CVs. We also report on some peculiar CVs, period bouncers and also CVs exhibiting large changes in accretion rates. We report 70 new CVs, 59 new periods, 178 unpublished spectra, and 262 new or updated classifications. From the SDSS spectroscopy, we also identified 18 systems incorrectly identified as CVs in the literature. We discuss the observed properties of 13 peculiar CVS, and we identify a small set of eight CVs that defy the standard classification scheme. We use this sample to investigate the distribution of different CV sub-types, and we estimate their individual space densities, as well as that of the entire CV population. The SDSS I to IV sample includes 14 period bounce CVs or candidates. We discuss the variability of CVs across the Hertzsprung–Russell diagram, highlighting selection biases of variability-based CV detection. Finally, we searched for, and found eight tertiary companions to the SDSS CVs. We anticipate that this catalogue and the extensive material included in the Supplementary Data will be useful for a range of observational population studies of CVs.

79 ASTRONOMY AND ASTROPHYSICS↗

DOE OSTI2022

Selecting Post-Processing Schemes for Accurate Detection of Small Objects in Low-Resolution Wide-Area Aerial Imagery

In low-resolution wide-area aerial imagery, object detection algorithms are categorized as feature extraction and machine learning approaches, where the former often requires a post-processing scheme to reduce false detections and the latter demands multi-stage learning followed by post-processing. In this paper, we present an approach on how to select post-processing schemes for aerial object detection. We evaluated combinations of each of ten vehicle detection algorithms with any of seven post-processing schemes, where the best three schemes for each algorithm were determined using average F-score metric. The performance improvement is quantified using basic information retrieval metrics as well as the classification of events, activities and relationships (CLEAR) metrics. We also implemented a two-stage learning algorithm using a hundred-layer densely connected convolutional neural network for small object detection and evaluated its degree of improvement when combined with the various post-processing schemes. The highest average F-scores after post-processing are 0.902, 0.704 and 0.891 for the Tucson, Phoenix and online VEDAI datasets, respectively. The combined results prove that our enhanced three-stage post-processing scheme achieves a mean average precision (mAP) of 63.9% for feature extraction methods and 82.8% for the machine learning approach.

54 ENVIRONMENTAL SCIENCES↗

DOE OSTI2022

Measuring Cosmological Parameters with Type Ia Supernovae in redMaGiC Galaxies

Abstract Current and future cosmological analyses with Type Ia supernovae (SNe Ia) face three critical challenges: (i) measuring the redshifts from the SNe or their host galaxies; (ii) classifying the SNe without spectra; and (iii) accounting for correlations between the properties of SNe Ia and their host galaxies. We present here a novel approach that addresses each of these challenges. In the context of the Dark Energy Survey (DES), we analyze an SN Ia sample with host galaxies in the redMaGiC galaxy catalog, a selection of luminous red galaxies. redMaGiC photo- z estimates are expected to be accurate to σ Δ z /(1+ z ) ∼ 0.02. The DES-5YR photometrically classified SN Ia sample contains approximately 1600 SNe, and 125 of these SNe are in redMaGiC galaxies. We demonstrate that redMaGiC galaxies almost exclusively host SNe Ia, reducing concerns relating to classification uncertainties. With this subsample, we find similar Hubble scatter (to within ∼0.01 mag) using photometric redshifts in place of spectroscopic redshifts. With detailed simulations, we show that the bias due to using redMaGiC photo- z s on the measurement of the dark energy equation of state w is up to Δ w ∼ 0.01–0.02. With real data, we measure a difference in w when using the redMaGiC photo- z s versus the spec- z s of Δ w = 0.005. Finally, we discuss how SNe in redMaGiC galaxies appear to comprise a more standardizable population, due to a weaker relation between color and luminosity ( β ) compared to the DES-3YR population by ∼5 σ . These results establish the feasibility of performing redMaGiC SN cosmology with photometric survey data in the absence of spectroscopic data.

79 ASTRONOMY AND ASTROPHYSICS↗

NASA NTRS1980

Assessment of the role of remote sensing in the study of inland and coastal waters

Several problems within Great Lakes, coastal, and continental shelf water were selected and organized under the topical headings of Productivity, Sedimentation, Water Dynamics, Eutrophication, and Hazardous Substances. The measurements required in the study of each of the problems were identified. An assessment was made of the present capability and the potential of remote sensing to make these measurements. The relevant remote-sensing technology for each of these classifications was discussed and needed advancements indicated.

Curfman, H. J.↗